BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135101.10 + phase: 0 /pseudo
(1477 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB80509.1| putative protein [Arabidopsis thaliana] gi|45393... 1171 0.0
dbj|BAC42056.1| unknown protein [Arabidopsis thaliana] gi|289730... 1165 0.0
emb|CAB37501.1| putative protein [Arabidopsis thaliana] gi|74858... 1045 0.0
dbj|BAD61853.1| hypothetical protein [Oryza sativa (japonica cul... 905 0.0
ref|XP_544632.1| PREDICTED: similar to RNA polymerase II associa... 100 3e-19
gb|AAH00246.2| DKFZP727M111 protein [Homo sapiens] 97 5e-18
ref|NP_056355.2| RNA polymerase II associated protein 1 [Homo sa... 97 5e-18
dbj|BAA92641.1| KIAA1403 protein [Homo sapiens] 97 5e-18
ref|XP_510325.1| PREDICTED: hypothetical protein XP_510325 [Pan ... 96 1e-17
emb|CAH91834.1| hypothetical protein [Pongo pygmaeus] 94 3e-17
ref|XP_230480.3| PREDICTED: similar to mKIAA1403 protein [Rattus... 89 1e-15
ref|NP_796268.2| RNA polymerase II associated protein 1 [Mus mus... 87 3e-15
dbj|BAC65787.1| mKIAA1403 protein [Mus musculus] 87 3e-15
ref|XP_624143.1| PREDICTED: similar to CG32104-PB [Apis mellifera] 80 5e-13
ref|XP_609854.1| PREDICTED: similar to mKIAA1403 protein, partia... 77 6e-12
ref|XP_641307.1| hypothetical protein DDB0206444 [Dictyostelium ... 62 1e-07
gb|AAH12218.1| Rpap1 protein [Mus musculus] 54 3e-05
gb|AAH51680.1| Rpap1 protein [Mus musculus] 54 3e-05
emb|CAI42674.1| alpha thalassemia/mental retardation syndrome X-... 53 9e-05
emb|CAI42675.1| alpha thalassemia/mental retardation syndrome X-... 53 9e-05
>emb|CAB80509.1| putative protein [Arabidopsis thaliana] gi|4539352|emb|CAB37500.1|
putative protein [Arabidopsis thaliana]
gi|7485956|pir||T05672 hypothetical protein F22I13.210 -
Arabidopsis thaliana
Length = 1468
Score = 1171 bits (3030), Expect = 0.0
Identities = 674/1490 (45%), Positives = 915/1490 (61%), Gaps = 137/1490 (9%)
Query: 1 MGFEKAAAFANPV*RKKTKGMDFGKWREKKTKGMDFGKWREFTQDDKSFLGKDLEKDVSS 60
M + AAFA P+ RK+ K MD G+W K M G DD + S+
Sbjct: 94 MNADSIAAFAKPLQRKEKKDMDLGRW-----KDMVSG-------DDPA----------ST 131
Query: 61 YGPTTGRKKN--ENGGKNTSKKISSYSDGSVFASMEVDAKPQLVKLDGGFINSATSMELD 118
+ P RK E + ++ + + + + + V FI + + E
Sbjct: 132 HVPQQSRKLKIIETRPPYVASADAATTSSNTLLAARASDQREFVSDKAPFIKNLGTKERV 191
Query: 119 TSNKDDKKEVFAAERDKIFSDRMTDHSSTSEKNYFMHEQESTSLENEIDSENRARIQQMS 178
N V N S+SLE++ID EN A++Q MS
Sbjct: 192 PLNASPPLAV---------------------SNGLGTRHASSSLESDIDVENHAKLQTMS 230
Query: 179 TEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPNSLKSEVGAVTESVNQQVQITQGAKH 238
+EI EA+A++++K+ PALL +L+KRG+ KLKK V E+ AK+
Sbjct: 231 PDEIAEAQAELLDKMDPALLSILKKRGEAKLKKRKHSVQGVSITDET----------AKN 280
Query: 239 LQTEDD-ISHTIMAPPSKKQLDDKNVSGKTSTTTSSSSWNAWSNRVEAIRELRFSLAGDV 297
+TE ++ +MA P +K + K W+AW+ RVEA R+LRFS G+V
Sbjct: 281 SRTEGHFVTPKVMAIPKEKSVVQK------PGIAQGFVWDAWTERVEAARDLRFSFDGNV 334
Query: 298 VDTEQ-EPV--------YDNIAERDYLRTEGDPGAAGYTIKEALEITRSVRALGLHLLSS 348
V+ + P ++ AERD+LRTEGDPGAAGYTIKEA+ + RSVR L LHLL+S
Sbjct: 335 VEEDVVSPAETGGKWSGVESAAERDFLRTEGDPGAAGYTIKEAIALARSVRCLALHLLAS 394
Query: 349 VLDKALCYICKDRTENMTKKGNKVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVV 408
VLDKAL +C+ R ++ DKS DWEA+W YALGP+PEL L+LRM LDDNH SVV
Sbjct: 395 VLDKALNKLCQSRIGYAREEK---DKSTDWEAIWAYALGPEPELVLALRMALDDNHASVV 451
Query: 409 LACAKVVQSALSCDVNENYFDISENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAK 468
+AC KV+Q LSC +NEN+F+I ENM + KDI TA VFRS+P+I LGFL+G YWKYSAK
Sbjct: 452 IACVKVIQCLLSCSLNENFFNILENMGPHGKDIFTASVFRSKPEIDLGFLRGCYWKYSAK 511
Query: 469 PSNIQPFSEDSMDNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETDPTAALEE 528
PSNI F E+ +D+ ++D TIQ DVFVAGQD AGLVRM ILPR+ +LLET+PTAALE+
Sbjct: 512 PSNIVAFREEILDDGTEDTDTIQKDVFVAGQDVAAGLVRMDILPRIYHLLETEPTAALED 571
Query: 529 CIVSILIAIVRHSPSCANAVLKCERLIQTIVQRFTVG-NFEIRSSMIKSVKLLKVLARLD 587
I+S+ IAI RHSP C A+LK + +QTIV+RF + ++ SS I SV+LLKVLAR D
Sbjct: 572 SIISVTIAIARHSPKCTTAILKYPKFVQTIVKRFQLNKRMDVLSSQINSVRLLKVLARYD 631
Query: 588 RKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGY 647
+ TC+EF+KNG FNA+TW+L+Q S+D W+KLGK+ CKL S L +EQLRFW+VCI G
Sbjct: 632 QSTCMEFVKNGTFNAVTWHLFQFTSSLDSWVKLGKQNCKLSSTLMVEQLRFWKVCIHSGC 691
Query: 648 CVSHFSKIFPALCFWLDLPSFEKLTKNNVLNESTCISREAYLVLESLAERLRNLFSQQCL 707
CVS F ++FPALC WL PSFEKL + N+++E T +S EAYLVLE+ AE L N++SQ
Sbjct: 692 CVSRFPELFPALCLWLSCPSFEKLREKNLISEFTSVSNEAYLVLEAFAETLPNMYSQNIP 751
Query: 708 TNQHPESTDDAEFWSWSYVGPMVDLAIKWIARRSDPEVYKLFEGQEEGVNHFTLGDLSST 767
N ++ W WSYV PM+D A+ WI P++ K +G E +S+T
Sbjct: 752 RN-------ESGTWDWSYVSPMIDSALSWITLA--PQLLKWEKGIES-------VSVSTT 795
Query: 768 PLLWVYAAVTHMLFRVLEKVTLGDAISLQEANGHVPWLPKFVPKIGLELINYWHLGFSVA 827
LLW+Y+ V + +VLEK IS + +PWLP+FVPKIGL +I + L FSVA
Sbjct: 796 TLLWLYSGVMRTISKVLEK------ISAEGEEEPLPWLPEFVPKIGLAIIKHKLLSFSVA 849
Query: 828 SVTKSGRDSGD-ESFMKELIHLRQKG-DIEMSLASTCCLNGIINVITKIDNLIRSAKTGI 885
V++ G+DS SFM+ L LR++ D E++LAS CL+G+ I I NLI SA++ +
Sbjct: 850 DVSRFGKDSSRCSSFMEYLCFLRERSQDDELALASVNCLHGLTRTIVSIQNLIESARSKM 909
Query: 886 CNPPVTEQSLSKEGKVLEEGIVSRCLVELRSMLDVFTFSASSGWQRMQSIEIFGRGGPAP 945
P S E VL GI++ L EL S+ F S SS W +QSIE+ RGG AP
Sbjct: 910 KAPHQVSISTGDE-SVLANGILAESLAELTSVSCSFRDSVSSEWPIVQSIELHKRGGLAP 968
Query: 946 GMGVGWGAHGGGFWSKTVLPVKTDARLLVCLLQIFENTSNDAPETEQMTFSMQQVNTALG 1005
G+G+GWGA GGGFWS VL + A LL L I + +D+ + M +VN+AL
Sbjct: 969 GVGLGWGASGGGFWSTRVLLAQAGAGLLSLFLNI---SLSDSQNDQGSVGFMDKVNSALA 1025
Query: 1006 LCLTAGPADMVVIEKTLDLLFHVSILKYLDLCIQNFLLNRRGKAFGWKYEDDDYMHFSRM 1065
+CL AGP D +++E+ + + L++L CI++ N++ +F W+ + DY S M
Sbjct: 1026 MCLIAGPRDYLLVERAFEYVLRPHALEHLACCIKS---NKKNISFEWECSEGDYHRMSSM 1082
Query: 1066 LSSHFRSRWLSVRVKSKAVDGSSSSGVKATPKADVRLDTIYEDSDM--SSTTSPCCNSLM 1123
L+SHFR RWL + +S A +G SGV+ K V L+TI+ED +M SST +S
Sbjct: 1083 LASHFRHRWLQQKGRSIAEEG--VSGVR---KGTVGLETIHEDGEMSNSSTQDKKSDSST 1137
Query: 1124 IEWARQNLPLPVHFYLSPISTIPLTKRAGPQKVGSVHNPHDPANLLEVAKCGLFFVLGIE 1183
IEWA Q +PLP H++LS IS + +G G P + LLEVAK G+FF+ G+E
Sbjct: 1138 IEWAHQRMPLPPHWFLSAISAV----HSGKTSTG----PPESTELLEVAKAGVFFLAGLE 1189
Query: 1184 TMSSFIGTGIPSPIQRVSLTWKLHSLSVNFLVGMEILEQDQGRETFEALQDLYGELLDKE 1243
+ S F +PSP+ V L WK H+LS LVGM+I+E R + LQ+LYG+ LD+
Sbjct: 1190 SSSGF--GSLPSPVVSVPLVWKFHALSTVLLVGMDIIEDKNTRNLYNYLQELYGQFLDEA 1247
Query: 1244 RFNQNKEAISDDKKHIEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQVSVYLHC 1303
R N + E LRFKSDIHE+YSTF+E +VEQ++++SYGD+++GRQVSVYLH
Sbjct: 1248 RLNH---------RDTELLRFKSDIHENYSTFLEMVVEQYAAVSYGDVVYGRQVSVYLHQ 1298
Query: 1304 CVESSIRLATWNTLSNARVLELLPPLEKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALD 1363
CVE S+RL+ W LSNARVLELLP L+KC A+GYLEP E+NE +LEAY KSW ALD
Sbjct: 1299 CVEHSVRLSAWTVLSNARVLELLPSLDKCLGEADGYLEPVEENEAVLEAYLKSWTCGALD 1358
Query: 1364 RAEIRGSVSYTMAVHHLSSFIFNACPVDKLLLRNNLVRSLLRDYAGKQQHEGMLMNLISH 1423
RA RGSV+YT+ VHH SS +F DK+ LRN +V++L+RD + K+ EGM+++L+ +
Sbjct: 1359 RAATRGSVAYTLVVHHFSSLVFCNQAKDKVSLRNKIVKTLVRDLSRKRHREGMMLDLLRY 1418
Query: 1424 NRQSTSNMDEQLDGLLHEESWLESRMKVLIEACEGNSSLLIQVKKLKDAA 1473
+ S + M+E++ + E RM+VL E CEGNS+LL++++KLK AA
Sbjct: 1419 KKGSANAMEEEVIA-----AETEKRMEVLKEGCEGNSTLLLELEKLKSAA 1463
>dbj|BAC42056.1| unknown protein [Arabidopsis thaliana] gi|28973069|gb|AAO63859.1|
unknown protein [Arabidopsis thaliana]
gi|30691971|ref|NP_195557.2| expressed protein
[Arabidopsis thaliana]
Length = 1465
Score = 1165 bits (3015), Expect = 0.0
Identities = 674/1494 (45%), Positives = 915/1494 (61%), Gaps = 141/1494 (9%)
Query: 1 MGFEKAAAFANPV*RKKTKGMDFGKWREKKTKGMDFGKWREFTQDDKSFLGKDLEKDVSS 60
M + AAFA P+ RK+ K MD G+W K M G DD + S+
Sbjct: 87 MNADSIAAFAKPLQRKEKKDMDLGRW-----KDMVSG-------DDPA----------ST 124
Query: 61 YGPTTGRKKN--ENGGKNTSKKISSYSDGSVFASMEVDAKPQLVKLDGGFINSATSMELD 118
+ P RK E + ++ + + + + + V FI + + E
Sbjct: 125 HVPQQSRKLKIIETRPPYVASADAATTSSNTLLAARASDQREFVSDKAPFIKNLGTKERV 184
Query: 119 TSNKDDKKEVFAAERDKIFSDRMTDHSSTSEKNYFMHEQESTSLENEIDSENRARIQQMS 178
N V N S+SLE++ID EN A++Q MS
Sbjct: 185 PLNASPPLAV---------------------SNGLGTRHASSSLESDIDVENHAKLQTMS 223
Query: 179 TEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPNSLKSEVGAVTESVNQQVQITQGAKH 238
+EI EA+A++++K+ PALL +L+KRG+ KLKK V E+ AK+
Sbjct: 224 PDEIAEAQAELLDKMDPALLSILKKRGEAKLKKRKHSVQGVSITDET----------AKN 273
Query: 239 LQTEDD-ISHTIMAPPSKKQLDDKNVSGKTSTTTSSSSWNAWSNRVEAIRELRFSLAGDV 297
+TE ++ +MA P +K + K W+AW+ RVEA R+LRFS G+V
Sbjct: 274 SRTEGHFVTPKVMAIPKEKSVVQK------PGIAQGFVWDAWTERVEAARDLRFSFDGNV 327
Query: 298 VDTEQ-EPV--------YDNIAERDYLRTEGDPGAAGYTIKEALEITRSV----RALGLH 344
V+ + P ++ AERD+LRTEGDPGAAGYTIKEA+ + RSV R L LH
Sbjct: 328 VEEDVVSPAETGGKWSGVESAAERDFLRTEGDPGAAGYTIKEAIALARSVIPGQRCLALH 387
Query: 345 LLSSVLDKALCYICKDRTENMTKKGNKVDKSVDWEAVWTYALGPQPELALSLRM*LDDNH 404
LL+SVLDKAL +C+ R ++ DKS DWEA+W YALGP+PEL L+LRM LDDNH
Sbjct: 388 LLASVLDKALNKLCQSRIGYAREEK---DKSTDWEAIWAYALGPEPELVLALRMALDDNH 444
Query: 405 NSVVLACAKVVQSALSCDVNENYFDISENMATYDKDICTAPVFRSRPDISLGFLQGGYWK 464
SVV+AC KV+Q LSC +NEN+F+I ENM + KDI TA VFRS+P+I LGFL+G YWK
Sbjct: 445 ASVVIACVKVIQCLLSCSLNENFFNILENMGPHGKDIFTASVFRSKPEIDLGFLRGCYWK 504
Query: 465 YSAKPSNIQPFSEDSMDNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETDPTA 524
YSAKPSNI F E+ +D+ ++D TIQ DVFVAGQD AGLVRM ILPR+ +LLET+PTA
Sbjct: 505 YSAKPSNIVAFREEILDDGTEDTDTIQKDVFVAGQDVAAGLVRMDILPRIYHLLETEPTA 564
Query: 525 ALEECIVSILIAIVRHSPSCANAVLKCERLIQTIVQRFTVG-NFEIRSSMIKSVKLLKVL 583
ALE+ I+S+ IAI RHSP C A+LK + +QTIV+RF + ++ SS I SV+LLKVL
Sbjct: 565 ALEDSIISVTIAIARHSPKCTTAILKYPKFVQTIVKRFQLNKRMDVLSSQINSVRLLKVL 624
Query: 584 ARLDRKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCI 643
AR D+ TC+EF+KNG FNA+TW+L+Q S+D W+KLGK+ CKL S L +EQLRFW+VCI
Sbjct: 625 ARYDQSTCMEFVKNGTFNAVTWHLFQFTSSLDSWVKLGKQNCKLSSTLMVEQLRFWKVCI 684
Query: 644 RYGYCVSHFSKIFPALCFWLDLPSFEKLTKNNVLNESTCISREAYLVLESLAERLRNLFS 703
G CVS F ++FPALC WL PSFEKL + N+++E T +S EAYLVLE+ AE L N++S
Sbjct: 685 HSGCCVSRFPELFPALCLWLSCPSFEKLREKNLISEFTSVSNEAYLVLEAFAETLPNMYS 744
Query: 704 QQCLTNQHPESTDDAEFWSWSYVGPMVDLAIKWIARRSDPEVYKLFEGQEEGVNHFTLGD 763
Q N ++ W WSYV PM+D A+ WI P++ K +G E
Sbjct: 745 QNIPRN-------ESGTWDWSYVSPMIDSALSWITLA--PQLLKWEKGIES-------VS 788
Query: 764 LSSTPLLWVYAAVTHMLFRVLEKVTLGDAISLQEANGHVPWLPKFVPKIGLELINYWHLG 823
+S+T LLW+Y+ V + +VLEK IS + +PWLP+FVPKIGL +I + L
Sbjct: 789 VSTTTLLWLYSGVMRTISKVLEK------ISAEGEEEPLPWLPEFVPKIGLAIIKHKLLS 842
Query: 824 FSVASVTKSGRDSGD-ESFMKELIHLRQKG-DIEMSLASTCCLNGIINVITKIDNLIRSA 881
FSVA V++ G+DS SFM+ L LR++ D E++LAS CL+G+ I I NLI SA
Sbjct: 843 FSVADVSRFGKDSSRCSSFMEYLCFLRERSQDDELALASVNCLHGLTRTIVSIQNLIESA 902
Query: 882 KTGICNPPVTEQSLSKEGKVLEEGIVSRCLVELRSMLDVFTFSASSGWQRMQSIEIFGRG 941
++ + P S E VL GI++ L EL S+ F S SS W +QSIE+ RG
Sbjct: 903 RSKMKAPHQVSISTGDE-SVLANGILAESLAELTSVSCSFRDSVSSEWPIVQSIELHKRG 961
Query: 942 GPAPGMGVGWGAHGGGFWSKTVLPVKTDARLLVCLLQIFENTSNDAPETEQMTFSMQQVN 1001
G APG+G+GWGA GGGFWS VL + A LL L I + +D+ + M +VN
Sbjct: 962 GLAPGVGLGWGASGGGFWSTRVLLAQAGAGLLSLFLNI---SLSDSQNDQGSVGFMDKVN 1018
Query: 1002 TALGLCLTAGPADMVVIEKTLDLLFHVSILKYLDLCIQNFLLNRRGKAFGWKYEDDDYMH 1061
+AL +CL AGP D +++E+ + + L++L CI++ N++ +F W+ + DY
Sbjct: 1019 SALAMCLIAGPRDYLLVERAFEYVLRPHALEHLACCIKS---NKKNISFEWECSEGDYHR 1075
Query: 1062 FSRMLSSHFRSRWLSVRVKSKAVDGSSSSGVKATPKADVRLDTIYEDSDM--SSTTSPCC 1119
S ML+SHFR RWL + +S A +G SGV+ K V L+TI+ED +M SST
Sbjct: 1076 MSSMLASHFRHRWLQQKGRSIAEEG--VSGVR---KGTVGLETIHEDGEMSNSSTQDKKS 1130
Query: 1120 NSLMIEWARQNLPLPVHFYLSPISTIPLTKRAGPQKVGSVHNPHDPANLLEVAKCGLFFV 1179
+S IEWA Q +PLP H++LS IS + +G G P + LLEVAK G+FF+
Sbjct: 1131 DSSTIEWAHQRMPLPPHWFLSAISAV----HSGKTSTG----PPESTELLEVAKAGVFFL 1182
Query: 1180 LGIETMSSFIGTGIPSPIQRVSLTWKLHSLSVNFLVGMEILEQDQGRETFEALQDLYGEL 1239
G+E+ S F +PSP+ V L WK H+LS LVGM+I+E R + LQ+LYG+
Sbjct: 1183 AGLESSSGF--GSLPSPVVSVPLVWKFHALSTVLLVGMDIIEDKNTRNLYNYLQELYGQF 1240
Query: 1240 LDKERFNQNKEAISDDKKHIEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQVSV 1299
LD+ R N + E LRFKSDIHE+YSTF+E +VEQ++++SYGD+++GRQVSV
Sbjct: 1241 LDEARLNH---------RDTELLRFKSDIHENYSTFLEMVVEQYAAVSYGDVVYGRQVSV 1291
Query: 1300 YLHCCVESSIRLATWNTLSNARVLELLPPLEKCFSGAEGYLEPAEDNEEILEAYAKSWVS 1359
YLH CVE S+RL+ W LSNARVLELLP L+KC A+GYLEP E+NE +LEAY KSW
Sbjct: 1292 YLHQCVEHSVRLSAWTVLSNARVLELLPSLDKCLGEADGYLEPVEENEAVLEAYLKSWTC 1351
Query: 1360 DALDRAEIRGSVSYTMAVHHLSSFIFNACPVDKLLLRNNLVRSLLRDYAGKQQHEGMLMN 1419
ALDRA RGSV+YT+ VHH SS +F DK+ LRN +V++L+RD + K+ EGM+++
Sbjct: 1352 GALDRAATRGSVAYTLVVHHFSSLVFCNQAKDKVSLRNKIVKTLVRDLSRKRHREGMMLD 1411
Query: 1420 LISHNRQSTSNMDEQLDGLLHEESWLESRMKVLIEACEGNSSLLIQVKKLKDAA 1473
L+ + + S + M+E++ + E RM+VL E CEGNS+LL++++KLK AA
Sbjct: 1412 LLRYKKGSANAMEEEVIA-----AETEKRMEVLKEGCEGNSTLLLELEKLKSAA 1460
>emb|CAB37501.1| putative protein [Arabidopsis thaliana] gi|7485878|pir||T05673
hypothetical protein F20M13.10 - Arabidopsis thaliana
Length = 1179
Score = 1045 bits (2703), Expect = 0.0
Identities = 588/1246 (47%), Positives = 783/1246 (62%), Gaps = 140/1246 (11%)
Query: 276 WNAWSNRVEAIRELRFSLAGDVVDTEQ-EPV--------YDNIAERDYLRTEGDPGAAGY 326
W+AW+ RVEA R+LRFS G+VV+ + P ++ AERD+LRTEGDPGAAGY
Sbjct: 21 WDAWTERVEAARDLRFSFDGNVVEEDVVSPAETGGKWSGVESAAERDFLRTEGDPGAAGY 80
Query: 327 TIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGNKVDKSVDWEAVW 382
TIKEA+ + RSV R L LHLL+SVLDKAL +C+ R ++ DKS DWEA+W
Sbjct: 81 TIKEAIALARSVIPGQRCLALHLLASVLDKALNKLCQSRIGYAREEK---DKSTDWEAIW 137
Query: 383 TYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISEN--------- 433
YALGP+PEL L+LRM LDDNH SVV+AC KV+Q LSC +NEN+F+I EN
Sbjct: 138 AYALGPEPELVLALRMALDDNHASVVIACVKVIQCLLSCSLNENFFNILENVIIHVQTDK 197
Query: 434 -------MATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDD 486
M + KDI TA VFRS+P+I LGFL+G YWKYSAKPSNI F E+ +D+ ++D
Sbjct: 198 THFYFQNMGPHGKDIFTASVFRSKPEIDLGFLRGCYWKYSAKPSNIVAFREEILDDGTED 257
Query: 487 KHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETDPTAALEECIVSILIAIVRHSPSCAN 546
TIQ DVFVAGQD AGLVRM ILPR+ +LLET+PTAALE+ I+S+ IAI RHSP C
Sbjct: 258 TDTIQKDVFVAGQDVAAGLVRMDILPRIYHLLETEPTAALEDSIISVTIAIARHSPKCTT 317
Query: 547 AVLKCERLIQTIVQRFTVGN-FEIRSSMIKSVKLLK-----VLARLDRKTCLEFIKNGYF 600
A+LK + +QTIV+RF + ++ SS I SV+LLK VLAR D+ TC+EF+KNG F
Sbjct: 318 AILKYPKFVQTIVKRFQLNKRMDVLSSQINSVRLLKNLMIRVLARYDQSTCMEFVKNGTF 377
Query: 601 NAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFSKIFPALC 660
NA+TW+L+Q S+D W+KLGK+ CKL S L +EQLRFW+VCI G CVS F ++FPALC
Sbjct: 378 NAVTWHLFQFTSSLDSWVKLGKQNCKLSSTLMVEQLRFWKVCIHSGCCVSRFPELFPALC 437
Query: 661 FWLDLPSFEKLTKNNVLNESTCISREAYLVLESLAERLRNLFSQQCLTNQHPESTDDAEF 720
WL PSFEKL + N+++E T +S EAYLVLE+ AE L N++SQ N ++
Sbjct: 438 LWLSCPSFEKLREKNLISEFTSVSNEAYLVLEAFAETLPNMYSQNIPRN-------ESGT 490
Query: 721 WSWSYVGPMVDLAIKWIARRSDPEVYKLFEGQEEGVNHFTLGDLSSTPLLWVYAAVTHML 780
W WSYV PM+D A+ WI P++ K +G E +V +
Sbjct: 491 WDWSYVSPMIDSALSWITLA--PQLLKWEKGIE---------------------SVMRTI 527
Query: 781 FRVLEKVTLGDAISLQEANGHVPWLPKFVPKIGLELINYWHLGFSVASVTKSGRDSGDES 840
+VLEK IS + +PWLP+FVPKIGL +I + L FSVA V++
Sbjct: 528 SKVLEK------ISAEGEEEPLPWLPEFVPKIGLAIIKHKLLSFSVADVSR--------- 572
Query: 841 FMKELIHLRQKGDIEMSLASTCCLNGIINVITKIDNLIRSAKTGICNPPVTEQSLSKEGK 900
+ D E++LAS CL+G+ I I NLI SA++ + P S E
Sbjct: 573 --------ERSQDDELALASVNCLHGLTRTIVSIQNLIESARSKMKAPHQVSISTGDE-S 623
Query: 901 VLEEGIVSRCLVELRSMLDVFTFSASSGWQRMQSIEIFGRGGPAPGMGVGWGAHGGGFWS 960
VL GI++ L EL S+ F S SS W +QSIE+ RGG APG+G+GWGA GGGFWS
Sbjct: 624 VLANGILAESLAELTSVSCSFRDSVSSEWPIVQSIELHKRGGLAPGVGLGWGASGGGFWS 683
Query: 961 KTVLPVKTDARLLVCLLQIFENTSNDAPETEQMTFSMQQVNTALGLCLTAGPADMVVIEK 1020
VL + A LL L I + +D+ + M +VN+AL +CL AGP D +++E+
Sbjct: 684 TRVLLAQAGAGLLSLFLNI---SLSDSQNDQGSVGFMDKVNSALAMCLIAGPRDYLLVER 740
Query: 1021 TLDLLFHVSILKYLDLCIQNFLLNRRGKAFGWKYEDDDYMHFSRMLSSHFRSRWLSVRVK 1080
+ + L++L CI++ N++ +F W+ + DY S ML+SHFR RWL + +
Sbjct: 741 AFEYVLRPHALEHLACCIKS---NKKNISFEWECSEGDYHRMSSMLASHFRHRWLQQKGR 797
Query: 1081 SKAVDGSSSSGVKATPKADVRLDTIYEDSDM--SSTTSPCCNSLMIEWARQNLPLPVHFY 1138
S A +G SGV+ K V L+TI+ED +M SST +S IEWA Q +PLP H++
Sbjct: 798 SIAEEG--VSGVR---KGTVGLETIHEDGEMSNSSTQDKKSDSSTIEWAHQRMPLPPHWF 852
Query: 1139 LSPISTIPLTKRAGPQKVGSVHNPHDPANLLEVAKCGLFFVLGIETMSSFIGTGIPSPIQ 1198
LS IS + +G G P + LLEVAK G+FF+ G+E+ S F +PSP+
Sbjct: 853 LSAISAV----HSGKTSTG----PPESTELLEVAKAGVFFLAGLESSSGF--GSLPSPVV 902
Query: 1199 RVSLTWKLHSLSVNFLVGMEILEQDQGRETFEALQDLYGELLDKERFNQNKEAISDDKKH 1258
V L WK H+LS LVGM+I+E R + LQ+LYG+ LD+ R N +
Sbjct: 903 SVPLVWKFHALSTVLLVGMDIIEDKNTRNLYNYLQELYGQFLDEARLNH---------RD 953
Query: 1259 IEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLS 1318
E LRFKSDIHE+YSTF+E +VEQ++++SYGD+++GRQVSVYLH CVE S+RL+ W LS
Sbjct: 954 TELLRFKSDIHENYSTFLEMVVEQYAAVSYGDVVYGRQVSVYLHQCVEHSVRLSAWTVLS 1013
Query: 1319 NARVLELLPPLEKCFSGAEGYLEPAE-----------DNEEILEAYAKSWVSDALDRAEI 1367
NARVLELLP L+KC A+GYLEP E +NE +LEAY KSW ALDRA
Sbjct: 1014 NARVLELLPSLDKCLGEADGYLEPVEVIYKNNKMLIVENEAVLEAYLKSWTCGALDRAAT 1073
Query: 1368 RGSVSYTMAVHHLSSFIFNACPVDKLLLRNNLVRSLLRDYAGKQQHEGMLMNLISHNRQS 1427
RGSV+YT+ VHH SS +F DK+ LRN +V++L+RD + K+ EGM+++L+ + + S
Sbjct: 1074 RGSVAYTLVVHHFSSLVFCNQAKDKVSLRNKIVKTLVRDLSRKRHREGMMLDLLRYKKGS 1133
Query: 1428 TSNMDEQLDGLLHEESWLESRMKVLIEACEGNSSLLIQVKKLKDAA 1473
+ M+E++ + E RM+VL E CEGNS+LL++++KLK AA
Sbjct: 1134 ANAMEEEVIA-----AETEKRMEVLKEGCEGNSTLLLELEKLKSAA 1174
>dbj|BAD61853.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 1487
Score = 905 bits (2339), Expect = 0.0
Identities = 566/1520 (37%), Positives = 829/1520 (54%), Gaps = 225/1520 (14%)
Query: 24 GKWREKKTKGMDFGKWREFTQDD---KSFLGKDLE-KDVSSYGPTTGRKKNENGGKNTSK 79
G + K+ KGMDF +WREF DD K K L+ K ++ TG GG K
Sbjct: 125 GPVKRKEKKGMDFSRWREFVADDAPPKRRQAKPLQPKKQTAQKIDTGVVAATTGGTAQEK 184
Query: 80 KISSYSDGSVFASMEV-DAKPQLVKLDGGFINSATSMELDTSNKDDKKEVFAAERDKIFS 138
+ G + +EV + K +L GG ++ D + + K+V A RD + +
Sbjct: 185 R-----SGGIGMQLEVGNGKEEL----GG-----AALMSDVAPRKPMKQVDA--RDDVRN 228
Query: 139 DRMTDHSSTSEKNYFMHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALL 198
+ S+ SL EI++EN AR+ MS EI EA+A+I+ ++ PA +
Sbjct: 229 VELRGEGMESDNG-------EPSLTAEINAENMARLAGMSAGEIAEAQAEILNRMDPAFV 281
Query: 199 KVLQKRGKEKL-KKPNSLKSEVGAVTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQ 257
++L++RGKEK + + K + G + S ++ + L + HT
Sbjct: 282 EMLKRRGKEKSGSRKDGGKGKGGGI--SGPGKISKAMPGEWLSAGEHSGHT--------- 330
Query: 258 LDDKNVSGKTSTTTSSSSWNAWSNRVEAIRELRFSLAGDVVD----TEQEPVY------- 306
W AWS RVE IR RF+L GD++ EQ+ V+
Sbjct: 331 ------------------WKAWSERVERIRSCRFTLEGDILGFQSCQEQQHVFWYPLHVN 372
Query: 307 ------------DNIAERDYLRTEGDPGAAGYTIKEALEITRSV----RALGLHLLSSVL 350
+ + ERD+LRTEGDP A GYTI EA+ ++RS+ R L L LL+ +L
Sbjct: 373 LAFPLTGKKAHVETVGERDFLRTEGDPAAVGYTINEAVALSRSMVPGQRVLALQLLALIL 432
Query: 351 DKALCYICKDRTENMTKKGNKVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLA 410
++AL + K + K+ N DK DW+AVW YA+GP+PEL LSLRM LDDNH+SVVL
Sbjct: 433 NRALQNLHKTDLIDNFKESNDDDKFNDWQAVWAYAIGPEPELVLSLRMSLDDNHDSVVLT 492
Query: 411 CAKVVQSALSCDVNENYFDISENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPS 470
CAKV+ + LS ++NE YFD+ E + KDICTAPVFRS+PD + GFL+GG+WKY+ KPS
Sbjct: 493 CAKVINAMLSYEMNEMYFDVLEKVVDQGKDICTAPVFRSKPDQNGGFLEGGFWKYNTKPS 552
Query: 471 NIQPFSEDSMDNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETDPTAALEECI 530
NI P ++ + E D+KHTIQDDV V+GQD AGLVRMGILPR+ +LLE DP LE+ +
Sbjct: 553 NILPHYGENDEEEGDEKHTIQDDVVVSGQDVAAGLVRMGILPRICFLLEMDPHPILEDNL 612
Query: 531 VSILIAIVRHSPSCANAVLKCERLIQTIVQRFT-VGNFEIRSSMIKSVKLLKVLARLDRK 589
VSIL+ + RHSP A+A+L C RL+Q++V+ G+ EI SS IK V LLKVL++ +R+
Sbjct: 613 VSILLGLARHSPQSADAILNCPRLVQSVVKLLVKQGSMEIHSSQIKGVNLLKVLSKYNRQ 672
Query: 590 TCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCV 649
TC F+ G F+ W +C
Sbjct: 673 TCFNFVNTGVFHQAMW-----------------------------------------HCP 691
Query: 650 SHFSKIFPALCFWLDLPSFEKLTKNNVLNESTCISREAYLVLESLAERLRNLFSQQCLTN 709
S F +KL+++NV+ E + I+ E+YLVL +LA+RL L S + L+
Sbjct: 692 SMF----------------QKLSESNVVAEFSSIATESYLVLGALAQRLPLLHSVEQLSK 735
Query: 710 QHPE-STDDAEFWSWSYVGPMVDLAIKWIARRSDPEVYKLFEGQEEGVNHFTLGDLSSTP 768
Q S E WSWS+ PMVDLA+ W+ P V L GQ + + L +
Sbjct: 736 QDMGLSGIQVETWSWSHAVPMVDLALSWLCLNDIPYVCLLISGQSKNI-------LEGSY 788
Query: 769 LLWVYAAVTHMLFRVLEKVTLGDAISLQEANGH-VPWLPKFVPKIGLELINYWHLGFSVA 827
V ++V ML +LE+++ S + + +PW+P FVPKIGL +I F
Sbjct: 789 FALVISSVLGMLDSILERIS---PDSTHDGKSYCLPWIPDFVPKIGLGVITNGFFNFLDD 845
Query: 828 SVTKSGRDSG--DESFMKELIHLRQKGDIEMSLASTCCLNGIINVITKIDNLIRSAKTGI 885
+ + + + S ++ L HLR +G+++ SL S C ++ + ID +I++A T
Sbjct: 846 NAVELEQHTSFHGSSLVQGLFHLRSQGNVDTSLCSISCFQRLLQLSCSIDRVIQNATTN- 904
Query: 886 CNPPVTEQSLSKEGKVLEEGIVSRCLVELRSMLDVFTFSASSGWQRMQSIEIFGRGGPAP 945
C + E G++LE+GI + L ML SS W +Q+IE+FGRGGPAP
Sbjct: 905 CTEHLKESKTGIAGRILEQGICNFWRNNLLDMLTSLLPMISSQWSILQNIEMFGRGGPAP 964
Query: 946 GMGVGWGAHGGGFWSKTVLPVKTDARLLVCLLQIFEN------TSNDAPE---------T 990
G+G GWGA+GGGFWS L + D+ ++ L++I T N + T
Sbjct: 965 GVGFGWGAYGGGFWSLNFLLAQLDSHFVLELMKILSTGPEGLVTVNKSVNPIVQEGNNVT 1024
Query: 991 EQMTFSMQQVNTALGLCLTAGPADMVVIEKTLDLLFHVSILKYLDLCIQNFLLNRRGKAF 1050
+ + + +++++ L + L AGP + +EK D+LFH S+LK+L + + + + KAF
Sbjct: 1025 DSVAITSERISSVLSVSLMAGPGQISTLEKAFDILFHPSVLKFLKSSVLDSHM-KLAKAF 1083
Query: 1051 GWKYEDDDYMHFSRMLSSHFRSRWLSVRVKSKAVDGSSSSGVKATPKADVRLDTIYEDSD 1110
W +D+Y+HFS +L+SHFRSRWL ++ K +++G PK L+TI E+++
Sbjct: 1084 EWDITEDEYLHFSSVLNSHFRSRWLVIKKKHSDEFTRNNNGTN-VPKIPETLETIQEETE 1142
Query: 1111 MSSTTSPCCNSLMIEWARQNLPLPVHFYLSPISTIPLTKRAGPQKVGSVHNPHDPANL-- 1168
++ +P C+ L +EWA Q LPLPVH+ LS + I K ANL
Sbjct: 1143 LAEAVNPPCSVLAVEWAHQRLPLPVHWILSAVCCIDDPK----------------ANLST 1186
Query: 1169 ---LEVAKCGLFFVLGIETMSSFIGTGIPSPIQRVSLTWKLHSLSVNFLVGMEILEQDQG 1225
++V+K GLFF+LG+E +S+ +P L WK+H+LS + M++L +D+
Sbjct: 1187 SYAVDVSKAGLFFLLGLEAISA-------APCLHAPLVWKMHALSASIRSSMDLLLEDRS 1239
Query: 1226 RETFEALQDLYGELLDK--------ERFNQNKEAISDDKK--HIEFLRFKSDIHESYSTF 1275
R+ F ALQ+LYG LD+ + A D++K E LRF+ IH +Y+TF
Sbjct: 1240 RDIFHALQELYGLHLDRLCQKYDSAHSVKKEGSASVDEEKVTRTEVLRFQEKIHANYTTF 1299
Query: 1276 IEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNARVLELLPPLEKCFSG 1335
+E L+EQF+++SYGD +FGRQV++YLH VE +IRLA WN LSNA VLELLPPL+KC
Sbjct: 1300 VESLIEQFAAVSYGDALFGRQVAIYLHRSVEPTIRLAAWNALSNAYVLELLPPLDKCVGD 1359
Query: 1336 AEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACPVDKLLL 1395
+GYLEP ED+E ILE+YAKSW S ALD+A R ++S+T+A HHLS F+F K +
Sbjct: 1360 VQGYLEPLEDDEGILESYAKSWTSGALDKAFQRDAMSFTVARHHLSGFVFQCSGSGK--V 1417
Query: 1396 RNNLVRSLLRDYAGKQQHEGMLMNLISHNRQSTSNMDEQLDGLLHEESWLESRMKVLIEA 1455
RN LV+SL+R Y K+ HE ML + S +++ + R +++ +A
Sbjct: 1418 RNKLVKSLIRCYGQKRHHEDMLKGFVLQGIAQDSQRNDE----------VSRRFEIMKDA 1467
Query: 1456 CEGNSSLLIQVKKLKDAAEK 1475
CE NSSLL +V++LK + ++
Sbjct: 1468 CEMNSSLLAEVRRLKTSIDR 1487
>ref|XP_544632.1| PREDICTED: similar to RNA polymerase II associated protein 1 [Canis
familiaris]
Length = 1690
Score = 100 bits (250), Expect = 3e-19
Identities = 123/542 (22%), Positives = 219/542 (39%), Gaps = 93/542 (17%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRG---KEKLK 210
+ Q++ I EN A++Q M+ EEI + + ++ ++ P+L+ L+ R ++ +
Sbjct: 220 LRSQDAEQEAQTIHEENIAKLQAMAPEEILQEQQRLLAQLDPSLVAFLRSRSHTHEQAGE 279
Query: 211 KPNSLKSEVGAVTESVNQQVQITQGAKHLQTEDDI-----SHTIMAPPSKKQLDDKNVSG 265
K + G E +++ + AK + EDD+ + + P K+ + V
Sbjct: 280 KATEEQRPGGHSVEVTGEELIVPISAKEPRQEDDLDPEAPALALPVNPHKEWVHMDTVEL 339
Query: 266 KTSTTTSSSSWNAWSNRVEAIRELRFSLAGDVVDTEQEPVYDNIAERDYLRTEGDPGAAG 325
+ T R + + RFSL G+++ P D + AG
Sbjct: 340 EKLHWTQDLP-PLRRQRTQERMQARFSLQGELL----APDVDLPTHLGLHHHGEEAERAG 394
Query: 326 YTIKEALEITRS----VRALGLHLLSSVLDKALCYICKDRTENMTKKGNKVDKSVDWEAV 381
Y+++E +TRS RAL LH+L+ V+ +A + G+++ SV
Sbjct: 395 YSLQELFHLTRSQVSQQRALALHVLAQVISRA----------QAGEFGDRLVGSV----- 439
Query: 382 WTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISENMATYDKDI 441
+ L LR LDD + V+ A + +++ L +E D + +
Sbjct: 440 --FRLLLDAGFLFLLRFSLDDRVDGVIAAAVRALRALLVAPGDEELLDTTFS-------- 489
Query: 442 CTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHT------------ 489
W + A + P ED D+E +D+
Sbjct: 490 ---------------------WYHGALVFPLMPSQEDKEDDEDEDEEPPAEKAKRKSPEK 528
Query: 490 -IQDDVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAIVRHSPSCANA 547
Q +A +D GL+ +LPRLRY+LE T P ++ I+++LI + RHS A
Sbjct: 529 GNQPPSDLARRDVIKGLLATNLLPRLRYVLEVTCPAPSVVLDILAVLIRLARHSLESATR 588
Query: 548 VLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLDRKTCLEFIKN 597
VL+C RLI+T+V+ F N+ + ++KLL+VLA R + +
Sbjct: 589 VLECPRLIETVVREFLPTNWSPVGVGPAPSLYKVPCATAMKLLRVLASAGRNIAARLL-S 647
Query: 598 GYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFSKIFP 657
G+ + L + + L E+ ++ S E R W V YG + +++P
Sbjct: 648 GF--DLRSRLCRFIAEAPQEMALLPEEAEMMST---ESFRLWAVAASYGQGGDLYRELYP 702
Query: 658 AL 659
L
Sbjct: 703 VL 704
Score = 54.7 bits (130), Expect = 2e-05
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNA-RVLELLPPL 1329
S+ +E F ++SYGD +FG V + L ++RLA + A R L L PL
Sbjct: 1212 SFPDLYANFLEHFEAVSYGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRALGL--PL 1269
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y EP EDN +L+ Y ++ V+ L V Y +AV H++SFIF+ P
Sbjct: 1270 TQLPVSLECYTEPPEDNLVLLQLYFRTLVTGVL--CPRWCPVLYAVAVAHVNSFIFSQDP 1327
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L ++ L G +QH
Sbjct: 1328 KSSDEVKAARRSLLQKTWLLADEGLRQH 1355
>gb|AAH00246.2| DKFZP727M111 protein [Homo sapiens]
Length = 1393
Score = 96.7 bits (239), Expect = 5e-18
Identities = 120/552 (21%), Positives = 220/552 (39%), Gaps = 114/552 (20%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPN 213
+ +QE+ I EN AR+Q M+ EEI + + ++ ++ P+L+ L+ +
Sbjct: 215 LRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSH--------S 266
Query: 214 SLKSEVGAVTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSS 273
+ + G E+ +++ + + ++ E+ + + P K+ + T
Sbjct: 267 HTQEQTG---ETASEEQRPGGPSANVTKEEPLMSAFASEPRKRDKLEPEAPALALPVTPQ 323
Query: 274 SSWNA----------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYL 315
W W+ + +R + RFSL G+++ + + + L
Sbjct: 324 KEWLHMDTVELEKLHWTQDLPPVRRQQTQERMQARFSLQGELLAPDVD-----LPTHLGL 378
Query: 316 RTEGDPGA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGN 370
G+ AGY+++E +TRS RAL LH+L+ V+ +A DR G+
Sbjct: 379 HHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLA-----GS 433
Query: 371 KVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDI 430
+ +D ++ LR LDD + V+ + +++ L +E D
Sbjct: 434 VLSLLLDAGFLFL------------LRFSLDDRVDGVIATAIRALRALLVAPGDEELLD- 480
Query: 431 SENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDK--- 487
+T+ W + A + P ED D + D++
Sbjct: 481 ----STFS------------------------WYHGALTFPLMPSQEDKEDEDKDEECPA 512
Query: 488 ---------HTIQDDVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAI 537
+ +A D GL+ +LPRLRY+LE T P A+ I+++LI +
Sbjct: 513 GKAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRL 572
Query: 538 VRHSPSCANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLD 587
RHS A VL+C RLI+TIV+ F ++ + ++KLL+VLA
Sbjct: 573 ARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAG 632
Query: 588 RKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGY 647
R + + + L ++ L L E+ ++ L+ E LR W V YG
Sbjct: 633 RNIAARLLSSFDLRS---RLCRIIAEAPQELALPPEEAEM---LSTEALRLWAVAASYGQ 686
Query: 648 CVSHFSKIFPAL 659
+ +++P L
Sbjct: 687 GGYLYRELYPVL 698
Score = 52.8 bits (125), Expect = 9e-05
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNA-RVLELLPPL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + A R L L PL
Sbjct: 1206 SFPDLYANFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRALSL--PL 1263
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y P EDN +L+ Y ++ V+ AL V Y +AV H++SFIF+ P
Sbjct: 1264 TQLPVSLECYTVPPEDNLALLQLYFRTLVTGALRPRWC--PVLYAVAVAHVNSFIFSQDP 1321
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L ++ L G +QH
Sbjct: 1322 QSSDEVKAARRSMLQKTWLLADEGLRQH 1349
>ref|NP_056355.2| RNA polymerase II associated protein 1 [Homo sapiens]
Length = 1393
Score = 96.7 bits (239), Expect = 5e-18
Identities = 120/552 (21%), Positives = 220/552 (39%), Gaps = 114/552 (20%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPN 213
+ +QE+ I EN AR+Q M+ EEI + + ++ ++ P+L+ L+ +
Sbjct: 215 LRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSH--------S 266
Query: 214 SLKSEVGAVTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSS 273
+ + G E+ +++ + + ++ E+ + + P K+ + T
Sbjct: 267 HTQEQTG---ETASEEQRPGGPSANVTKEEPLMSAFASEPRKRDKLEPEAPALALPVTPQ 323
Query: 274 SSWNA----------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYL 315
W W+ + +R + RFSL G+++ + + + L
Sbjct: 324 KEWLHMDTVELEKLHWTQDLPPVRRQQTQERMQARFSLQGELLAPDVD-----LPTHLGL 378
Query: 316 RTEGDPGA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGN 370
G+ AGY+++E +TRS RAL LH+L+ V+ +A DR G+
Sbjct: 379 HHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLA-----GS 433
Query: 371 KVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDI 430
+ +D ++ LR LDD + V+ + +++ L +E D
Sbjct: 434 VLSLLLDAGFLFL------------LRFSLDDRVDGVIATAIRALRALLVAPGDEELLD- 480
Query: 431 SENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDK--- 487
+T+ W + A + P ED D + D++
Sbjct: 481 ----STFS------------------------WYHGALTFPLMPSQEDKEDEDEDEECPA 512
Query: 488 ---------HTIQDDVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAI 537
+ +A D GL+ +LPRLRY+LE T P A+ I+++LI +
Sbjct: 513 GKAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRL 572
Query: 538 VRHSPSCANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLD 587
RHS A VL+C RLI+TIV+ F ++ + ++KLL+VLA
Sbjct: 573 ARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAG 632
Query: 588 RKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGY 647
R + + + L ++ L L E+ ++ L+ E LR W V YG
Sbjct: 633 RNIAARLLSSFDLRS---RLCRIIAEAPQELALPPEEAEM---LSTEALRLWAVAASYGQ 686
Query: 648 CVSHFSKIFPAL 659
+ +++P L
Sbjct: 687 GGYLYRELYPVL 698
Score = 52.8 bits (125), Expect = 9e-05
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNA-RVLELLPPL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + A R L L PL
Sbjct: 1206 SFPDLYANFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRALSL--PL 1263
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y P EDN +L+ Y ++ V+ AL V Y +AV H++SFIF+ P
Sbjct: 1264 TQLPVSLECYTVPPEDNLALLQLYFRTLVTGALRPRWC--PVLYAVAVAHVNSFIFSQDP 1321
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L ++ L G +QH
Sbjct: 1322 QSSDEVKAARRSMLQKTWLLADEGLRQH 1349
>dbj|BAA92641.1| KIAA1403 protein [Homo sapiens]
Length = 1337
Score = 96.7 bits (239), Expect = 5e-18
Identities = 120/552 (21%), Positives = 220/552 (39%), Gaps = 114/552 (20%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPN 213
+ +QE+ I EN AR+Q M+ EEI + + ++ ++ P+L+ L+ +
Sbjct: 237 LRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSH--------S 288
Query: 214 SLKSEVGAVTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSS 273
+ + G E+ +++ + + ++ E+ + + P K+ + T
Sbjct: 289 HTQEQTG---ETASEEQRPGGPSANVTKEEPLMSAFASEPRKRDKLEPEAPALALPVTPQ 345
Query: 274 SSWNA----------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYL 315
W W+ + +R + RFSL G+++ + + + L
Sbjct: 346 KEWLHMDTVELEKLHWTQDLPPVRRQQTQERMQARFSLQGELLAPDVD-----LPTHLGL 400
Query: 316 RTEGDPGA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGN 370
G+ AGY+++E +TRS RAL LH+L+ V+ +A DR G+
Sbjct: 401 HHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLA-----GS 455
Query: 371 KVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDI 430
+ +D ++ LR LDD + V+ + +++ L +E D
Sbjct: 456 VLSLLLDAGFLFL------------LRFSLDDRVDGVIATAIRALRALLVAPGDEELLD- 502
Query: 431 SENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDK--- 487
+T+ W + A + P ED D + D++
Sbjct: 503 ----STFS------------------------WYHGALTFPLMPSQEDKEDEDKDEECPA 534
Query: 488 ---------HTIQDDVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAI 537
+ +A D GL+ +LPRLRY+LE T P A+ I+++LI +
Sbjct: 535 GKAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRL 594
Query: 538 VRHSPSCANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLD 587
RHS A VL+C RLI+TIV+ F ++ + ++KLL+VLA
Sbjct: 595 ARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAG 654
Query: 588 RKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGY 647
R + + + L ++ L L E+ ++ L+ E LR W V YG
Sbjct: 655 RNIAARLLSSFDLRS---RLCRIIAEAPQELALPPEEAEM---LSTEALRLWAVAASYGQ 708
Query: 648 CVSHFSKIFPAL 659
+ +++P L
Sbjct: 709 GGYLYRELYPVL 720
>ref|XP_510325.1| PREDICTED: hypothetical protein XP_510325 [Pan troglodytes]
Length = 1163
Score = 95.5 bits (236), Expect = 1e-17
Identities = 121/552 (21%), Positives = 213/552 (37%), Gaps = 114/552 (20%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPN 213
+ +QE+ I EN AR+Q M+ EEI + + ++ ++ P+L+ L+ + + +
Sbjct: 215 LRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSHSRTQEQTGE 274
Query: 214 SLKSEVGAVTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSS 273
+ E S N + E+ + + P K + T
Sbjct: 275 TASEEQRPGGPSAN-----------VTKEEPLMSAFASEPRKGDKLEPEAPALALPVTPQ 323
Query: 274 SSWNA----------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYL 315
W W+ + +R + RFSL G+++ + + + L
Sbjct: 324 KEWLHMDTVELEKLHWTQDLPPVRRQQTQERMQARFSLQGELLAPDAD-----LPTHLGL 378
Query: 316 RTEGDPGA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGN 370
G+ AGY+++E +TRS RAL LH+L+ V+ +A DR G+
Sbjct: 379 HHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLA-----GS 433
Query: 371 KVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDI 430
+ +D ++ LR LDD + V+ + +++ L +E D
Sbjct: 434 VLSLLLDAGFLFL------------LRFSLDDRVDGVIATAIRALRALLVAPGDEELLD- 480
Query: 431 SENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDK--- 487
+T+ W + A + P ED D + D++
Sbjct: 481 ----STFS------------------------WYHGALTFPLMPSQEDKEDEDEDEECPA 512
Query: 488 ---------HTIQDDVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAI 537
+ +A D GL+ +LPRLRY+LE T P A+ I+++LI +
Sbjct: 513 GNAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRL 572
Query: 538 VRHSPSCANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLD 587
RHS A VL+C RLI+TIV+ F ++ + ++KLL+VLA
Sbjct: 573 ARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAG 632
Query: 588 RKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGY 647
R + + + L + L L E+ ++ L+ E LR W V YG
Sbjct: 633 RNIAARLLSSFDLRS---RLCRFIAEAPQELALPPEEAEM---LSTEALRLWAVAASYGQ 686
Query: 648 CVSHFSKIFPAL 659
+ +++P L
Sbjct: 687 GGYLYRELYPVL 698
Score = 37.7 bits (86), Expect = 2.9
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Query: 1324 ELLPPLEKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSF 1383
ELLP +C Y P EDN +L+ Y ++ V+ AL V Y +AV H++SF
Sbjct: 1034 ELLPVSLEC------YTVPPEDNLALLQLYFRTLVTGALRPRWC--PVLYAVAVAHVNSF 1085
Query: 1384 IFNACPVD----KLLLRNNLVRSLLRDYAGKQQH 1413
IF+ P K R+ L ++ L G +QH
Sbjct: 1086 IFSQDPQSSDEVKAARRSMLQKTWLLADEGLRQH 1119
>emb|CAH91834.1| hypothetical protein [Pongo pygmaeus]
Length = 1074
Score = 94.4 bits (233), Expect = 3e-17
Identities = 122/552 (22%), Positives = 211/552 (38%), Gaps = 114/552 (20%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEKLKKPN 213
+ +QE+ I EN AR+Q M+ EEI + + ++ ++ P+L+ L+ + + +
Sbjct: 215 LRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSHSRTQEQTGE 274
Query: 214 SLKSEVGAVTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSS 273
+ E S N + E+ + + P K D T
Sbjct: 275 TASEEQRPGGPSAN-----------VTKEEPLMSAFASEPRKGDKLDSEAPALALPVTPQ 323
Query: 274 SSWNA----------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYL 315
W W+ + ++ + RFSL G+++ + + + L
Sbjct: 324 KEWLHMDTVELEKLHWTQDLPPVQRRQTQERMQARFSLQGELLAPDVD-----LPTHLGL 378
Query: 316 RTEGDPGA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGN 370
G+ AGY+ +E +TRS RAL LH+L+ V+ +A DR G+
Sbjct: 379 HHHGEEAERAGYSPQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLA-----GS 433
Query: 371 KVDKSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDI 430
+ +D ++ LR LDD + V+ + +++ L +E D
Sbjct: 434 VLSLLLDAGFLFL------------LRFSLDDRVDGVIATAIRALRALLVAPGDEELLD- 480
Query: 431 SENMATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTI 490
+T+ W + A + P ED D + D++ T
Sbjct: 481 ----STFS------------------------WYHGALTFPLMPSQEDKEDEDEDEECTA 512
Query: 491 ------------QDDVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAI 537
+ +A D GL+ +LPRLRY+LE T P A+ I+++LI +
Sbjct: 513 GKAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRL 572
Query: 538 VRHSPSCANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLD 587
RHS A VL+C RLI+TIV+ F ++ + ++KLL+VLA
Sbjct: 573 ARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAG 632
Query: 588 RKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGY 647
R + + + L L L E+ + L+ E LR W V YG
Sbjct: 633 RNIAARLLSSFDLRS---RLCHFIAEAPQELALPPEEAE---TLSTEALRLWAVAASYGQ 686
Query: 648 CVSHFSKIFPAL 659
+ +++P L
Sbjct: 687 GGHLYRELYPVL 698
>ref|XP_230480.3| PREDICTED: similar to mKIAA1403 protein [Rattus norvegicus]
Length = 1411
Score = 89.0 bits (219), Expect = 1e-15
Identities = 125/549 (22%), Positives = 217/549 (38%), Gaps = 93/549 (16%)
Query: 154 MHEQESTSLENEIDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQK----RGKEKL 209
+ Q + I EN AR+Q M EEI + + ++ ++ P+L+ L+ R + +
Sbjct: 215 LRSQAAVQEVQTIHEENVARLQAMDPEEILKEQQQLLAQLDPSLVAFLRAHNHTREQTET 274
Query: 210 KKPNSLKSEVGAVTESVNQQVQIT---QGAKHLQTEDDISHTIMA-PPSKKQLDDKNVSG 265
K E +V S + + T + + ED + + P+ K N
Sbjct: 275 KATKEQNPERPSVPVSKEEPIMSTCTGESGTRDKLEDKLEDKLQPRTPALKLPMTPNKEW 334
Query: 266 KTSTTTSSSSWNAWSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYLRT 317
T + W+ + +R + RFSL G+++ EP D
Sbjct: 335 LHMDTVELEKLH-WTQDLPPLRRQQTQERMQARFSLQGELL----EPDVDLPTHLGLHHH 389
Query: 318 EGDPGAAGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGNKVD 373
+ AGY+++E +TRS RAL LH+LS ++ + + K + G+++
Sbjct: 390 GEEAERAGYSLQELFHLTRSQVSQQRALALHVLSHIVGRCHPPVPKAQAGEF---GDRLV 446
Query: 374 KSVDWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISEN 433
SV L LR LDD +SV+ A + +++ L +E D
Sbjct: 447 GSV-------LRLLLDAGFLFLLRFSLDDRIDSVIAAAVRALRALLVAPGDEELLD---- 495
Query: 434 MATYDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTIQD- 492
+T+ W + A + P +D D + D++ T +
Sbjct: 496 -STFS------------------------WYHGASVFPMMPSHDDKEDEDEDEELTKEKV 530
Query: 493 -----------DVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAIVRH 540
+A D GL+ +LPR RY+LE T P ++ I+++LI + RH
Sbjct: 531 NRKTPEEGSRPPPDLARHDVIKGLLATNLLPRFRYVLEVTCPGPSVVLDILAVLIRLARH 590
Query: 541 SPSCANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLDRKT 590
S A VL+C RL++TIV+ F ++ + ++KLL+VLA R
Sbjct: 591 SLESAMRVLECPRLMETIVREFLPTSWSPIGVGPAPSLYKVPCAAAMKLLRVLASAGRNI 650
Query: 591 CLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVS 650
+ + F+ + L + L L E+ ++ LT E R W V YG
Sbjct: 651 AARLLSS--FDVRS-RLCRFIAEAPRDLALPFEEAEI---LTTEAFRLWAVAASYGQGGD 704
Query: 651 HFSKIFPAL 659
+ +++P L
Sbjct: 705 LYRELYPVL 713
Score = 52.4 bits (124), Expect = 1e-04
Identities = 38/116 (32%), Positives = 61/116 (51%), Gaps = 5/116 (4%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNARVLELLP-PL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + + VL L PL
Sbjct: 1220 SFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFG--EHVGVLRALGLPL 1277
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIF 1385
+ E Y EPAED+ +L+ Y ++ V+ AL V YT+AV H++SF+F
Sbjct: 1278 AQLPVPLECYTEPAEDSLALLQLYFRALVTGALHARWC--PVLYTVAVAHVNSFVF 1331
>ref|NP_796268.2| RNA polymerase II associated protein 1 [Mus musculus]
Length = 1409
Score = 87.4 bits (215), Expect = 3e-15
Identities = 123/546 (22%), Positives = 208/546 (37%), Gaps = 110/546 (20%)
Query: 166 IDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEK----LKKPNSLKSEVGA 221
I EN AR+Q M EEI + + ++ ++ P+L+ L+ + + K E +
Sbjct: 227 IHEENVARLQAMDPEEILKEQQQLLAQLDPSLVAFLRSHSQVQEQTGTKATKKQSPERPS 286
Query: 222 VTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLD--DKNVSGKTSTTTSSSSWNA- 278
V + + V T+ + +T D + A K D T S W
Sbjct: 287 VLVTKEEPVTSTR-TREPRTGDKLEEKPEATVEDKMEDKLQPRTPALKLPMTPSKDWLHM 345
Query: 279 ---------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYLRTEGDP 321
W+ + +R + RFSL G+++ + + + L G+
Sbjct: 346 DTVELDKLHWTQDLPPLRRQQTQERMQARFSLQGELLAPDVD-----LPTHLGLHHHGEE 400
Query: 322 GA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGNKVDKSV 376
AGY+++E +TRS RAL L +LS ++ +A DR +
Sbjct: 401 AERAGYSLQELFHLTRSQVSQQRALALQVLSQIVGRAQAGEFGDRLVGSVLR-------- 452
Query: 377 DWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISENMAT 436
L LR LDD +SV+ A + +++ L +E D + +
Sbjct: 453 ---------LLLDAGFLFLLRFSLDDRVDSVIAAAVRALRTLLVAPGDEELLDRTFS--- 500
Query: 437 YDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTIQD---- 492
W + A + P +D D + D++ T +
Sbjct: 501 --------------------------WYHGASVFPLMPSQDDKEDEDEDEELTTEKVKRK 534
Query: 493 --------DVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAIVRHSPS 543
+A D GL+ +LPRLRY+LE T P ++ I+++LI + RHS
Sbjct: 535 TPEEGSRPPPDLARHDVIKGLLATNLLPRLRYVLEVTCPGPSVVLDILAVLIRLARHSLE 594
Query: 544 CANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLDRKTCLE 593
A VL+C RL++TIVQ F ++ + ++KLL+VLA R
Sbjct: 595 SAMRVLECPRLMETIVQEFLPTSWSPIGVGPTPSLYKVPCASAMKLLRVLASAGRNIAAR 654
Query: 594 FIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFS 653
+ F+ + L + L L E+ ++ LT E R W V YG +
Sbjct: 655 LLSG--FDVRS-RLCRFIAEAPHDLALPPEEAEI---LTTEAFRLWAVAASYGQGGDLYR 708
Query: 654 KIFPAL 659
+++P L
Sbjct: 709 ELYPVL 714
Score = 54.3 bits (129), Expect = 3e-05
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNARVLELLP-PL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + + VL L PL
Sbjct: 1222 SFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFG--EHVGVLRALGLPL 1279
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y EPAED+ +L+ Y ++ V+ +L RA + YT+AV H++SFIF P
Sbjct: 1280 TQLPVPLECYTEPAEDSLPLLQLYFRALVTGSL-RAR-WCPILYTVAVAHVNSFIFCQDP 1337
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L R+ L G +QH
Sbjct: 1338 KSSDEVKTARRSMLQRTWLLTDEGLRQH 1365
>dbj|BAC65787.1| mKIAA1403 protein [Mus musculus]
Length = 1444
Score = 87.4 bits (215), Expect = 3e-15
Identities = 123/546 (22%), Positives = 208/546 (37%), Gaps = 110/546 (20%)
Query: 166 IDSENRARIQQMSTEEIEEAKADIMEKISPALLKVLQKRGKEK----LKKPNSLKSEVGA 221
I EN AR+Q M EEI + + ++ ++ P+L+ L+ + + K E +
Sbjct: 262 IHEENVARLQAMDPEEILKEQQQLLAQLDPSLVAFLRSHSQVQEQTGTKATKKQSPERPS 321
Query: 222 VTESVNQQVQITQGAKHLQTEDDISHTIMAPPSKKQLD--DKNVSGKTSTTTSSSSWNA- 278
V + + V T+ + +T D + A K D T S W
Sbjct: 322 VLVTKEEPVTSTR-TREPRTGDKLEEKPEATVEDKMEDKLQPRTPALKLPMTPSKDWLHM 380
Query: 279 ---------WSNRVEAIR--------ELRFSLAGDVVDTEQEPVYDNIAERDYLRTEGDP 321
W+ + +R + RFSL G+++ + + + L G+
Sbjct: 381 DTVELDKLHWTQDLPPLRRQQTQERMQARFSLQGELLAPDVD-----LPTHLGLHHHGEE 435
Query: 322 GA-AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGNKVDKSV 376
AGY+++E +TRS RAL L +LS ++ +A DR +
Sbjct: 436 AERAGYSLQELFHLTRSQVSQQRALALQVLSQIVGRAQAGEFGDRLVGSVLR-------- 487
Query: 377 DWEAVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISENMAT 436
L LR LDD +SV+ A + +++ L +E D + +
Sbjct: 488 ---------LLLDAGFLFLLRFSLDDRVDSVIAAAVRALRTLLVAPGDEELLDRTFS--- 535
Query: 437 YDKDICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTIQD---- 492
W + A + P +D D + D++ T +
Sbjct: 536 --------------------------WYHGASVFPLMPSQDDKEDEDEDEELTTEKVKRK 569
Query: 493 --------DVFVAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAIVRHSPS 543
+A D GL+ +LPRLRY+LE T P ++ I+++LI + RHS
Sbjct: 570 TPEEGSRPPPDLARHDVIKGLLATNLLPRLRYVLEVTCPGPSVVLDILAVLIRLARHSLE 629
Query: 544 CANAVLKCERLIQTIVQRFTVGNFE----------IRSSMIKSVKLLKVLARLDRKTCLE 593
A VL+C RL++TIVQ F ++ + ++KLL+VLA R
Sbjct: 630 SAMRVLECPRLMETIVQEFLPTSWSPIGVGPTPSLYKVPCASAMKLLRVLASAGRNIAAR 689
Query: 594 FIKNGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFS 653
+ F+ + L + L L E+ ++ LT E R W V YG +
Sbjct: 690 LLSG--FDVRS-RLCRFIAEAPHDLALPPEEAEI---LTTEAFRLWAVAASYGQGGDLYR 743
Query: 654 KIFPAL 659
+++P L
Sbjct: 744 ELYPVL 749
Score = 54.3 bits (129), Expect = 3e-05
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNARVLELLP-PL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + + VL L PL
Sbjct: 1257 SFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFG--EHVGVLRALGLPL 1314
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y EPAED+ +L+ Y ++ V+ +L RA + YT+AV H++SFIF P
Sbjct: 1315 TQLPVPLECYTEPAEDSLPLLQLYFRALVTGSL-RAR-WCPILYTVAVAHVNSFIFCQDP 1372
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L R+ L G +QH
Sbjct: 1373 KSSDEVKTARRSMLQRTWLLTDEGLRQH 1400
>ref|XP_624143.1| PREDICTED: similar to CG32104-PB [Apis mellifera]
Length = 1005
Score = 80.1 bits (196), Expect = 5e-13
Identities = 126/562 (22%), Positives = 228/562 (40%), Gaps = 131/562 (23%)
Query: 117 LDTSNKDDKKEVFAAERDKIFSDRMTDHSSTSEKNYFMHEQESTSLE----NEIDSENRA 172
+ T K+DK + ++ S+ + + + +S +E NEI EN
Sbjct: 27 VSTDMKNDKSQSLFWQQISPKSNALNRIKEFQKSEFLCISDKSVIVEGSWANEIHKENLE 86
Query: 173 RIQQMSTEEIEEAKADIMEKISPALLKVLQKR--GKEKLKK--PNSLKSEVGAVTESVNQ 228
R++QMS E+I + K+ + + P L++ L+ + K+K+ K N+++ + ++ + +
Sbjct: 87 RLKQMSQEDILKEKSKLEITLKPELVQFLRDKRIKKQKINKIQENNVEQNIPKSSKKLME 146
Query: 229 QVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGKTSTTTSSSSWNAWSNRVEAIRE 288
Q + +G H+ D + + K Q + + KT+ S +NA
Sbjct: 147 QAK-EKGWIHM---DSLEY------EKLQWMEDIPAEKTNEPASDEPYNA---------- 186
Query: 289 LRFSLAGDVVDTEQEPVYDNIAERDYLRTEG-DPGAAGYTIKEALEITRS----VRALGL 343
RF G ++ + DNI+ + L G +P GY+++E L++TRS R L
Sbjct: 187 -RFDFNGVLLAYKD----DNISMQKGLHHHGEEPERPGYSLQELLQLTRSSTQQQRCTAL 241
Query: 344 HLLSSVLDKALCYICKDRTENMTKKGNKVDKSVDWEAVWTYALGPQPELALS-------L 396
L+++++K ++KG W + L P P +ALS L
Sbjct: 242 ITLANIIEK-------------SRKG--------W---YDKTLQPPPLIALSQRNLLLLL 277
Query: 397 RM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISENMATYDKDICTAPVFRSRPDISLG 456
R LDD +V+ A + +++ L + +E D Y + I T S+ D+
Sbjct: 278 RFSLDDTSVAVITATLQALRAFLYSEEDEICLDRLYGFKNYKEPILTT----SKTDV--- 330
Query: 457 FLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRY 516
DD + ++D V D A L+R IL R+RY
Sbjct: 331 ----------------------------DDINNLKDHELVQ-LDAIAALLRTDILLRIRY 361
Query: 517 LL-ETDPTAALEECIVSILIAIVRHSPSCANAVLKCERLIQTIVQRF------------T 563
+L E P+ + ILI +VRHSP + L++ I++ F T
Sbjct: 362 ILNEVRPSPVAVTYALEILIRLVRHSPISTIKIANTSHLLEIIIEHFMPLSTDALAITDT 421
Query: 564 VGNFEIRSSMIKSVKLLKVLARLDRKTCLEFIKNGYFNAMTWNLYQLPLSIDDWLKLGKE 623
+ N ++ +V+ +VL K+ + + N + Q +S + +
Sbjct: 422 INNV-YGVPVVAAVRFCRVLLCYGEKSIAQKLNN-------LKIVQRIISY-----ITCD 468
Query: 624 KCKLKSALTIEQLRFWRVCIRY 645
K+ L+IE LR WR + Y
Sbjct: 469 AGKISFNLSIESLRLWRTLLLY 490
Score = 40.0 bits (92), Expect = 0.59
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNT-LSNARVLELLPPL 1329
S++ + E F S SYGD F + + + + R W+ + R + L PL
Sbjct: 867 SFTDLFTAMCEHFCSTSYGDYGFSMTLLIPIAQRHDVHYRKLLWSEHIGLLRYIRL--PL 924
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFI 1384
E+ + YL P E++ ++E+Y + V +++ + YT+A+HH + ++
Sbjct: 925 EQLIIPLKEYLYPFEEDTSLIESYITALVRGIVNQNWC--PIPYTIALHHSAMYL 977
>ref|XP_609854.1| PREDICTED: similar to mKIAA1403 protein, partial [Bos taurus]
Length = 1029
Score = 76.6 bits (187), Expect = 6e-12
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 79/363 (21%)
Query: 324 AGYTIKEALEITRSV----RALGLHLLSSVLDKALCYICKDRTENMTKKGNKVDKSVDWE 379
AGY+++E +TRS RAL LH+L+ V+ +A DR G+ + +D
Sbjct: 2 AGYSLQELFHLTRSQVSQQRALALHVLAQVIGRAQAGEFGDRLV-----GSVLHLLLDAG 56
Query: 380 AVWTYALGPQPELALSLRM*LDDNHNSVVLACAKVVQSALSCDVNENYFDISENMATYDK 439
++ LR LDD + V+ A + +++ L +E D +T+
Sbjct: 57 FLFL------------LRFSLDDRVDGVIAAAVRALRALLVAPGDEELLD-----STFS- 98
Query: 440 DICTAPVFRSRPDISLGFLQGGYWKYSAKPSNIQPFSEDSMDNESDDKHTIQDDVF---- 495
W + A + P ED D + D++ +
Sbjct: 99 -----------------------WYHGALMFALMPSQEDKEDEDEDEEPPAEKAKTKSPE 135
Query: 496 --------VAGQDFTAGLVRMGILPRLRYLLE-TDPTAALEECIVSILIAIVRHSPSCAN 546
+A D GL+ +LPRLRY+LE T P ++ I+++LI + RHS A
Sbjct: 136 EGNRPPSDLARHDIIKGLLATNLLPRLRYVLEVTCPGPSVVLDILTVLIRLARHSLEAAT 195
Query: 547 AVLKCERLIQTIVQRFTVGNFEIRSS----------MIKSVKLLKVLARLDRKTCLEFIK 596
VL+C RL++T+V+ F ++ S ++KLL+VLA R +
Sbjct: 196 RVLECPRLVETVVREFLPTSWSPMGSGPTSSLHRVPCAPAMKLLRVLASASRNIAARLL- 254
Query: 597 NGYFNAMTWNLYQLPLSIDDWLKLGKEKCKLKSALTIEQLRFWRVCIRYGYCVSHFSKIF 656
+G+ + L + L L E+ + L+ E R W V YG + +++
Sbjct: 255 SGF--DLRSRLSRFIAEDPQDLALPLEEAE---TLSTEAFRLWAVAASYGLGSDLYRELY 309
Query: 657 PAL 659
P L
Sbjct: 310 PVL 312
Score = 53.9 bits (128), Expect = 4e-05
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNA-RVLELLPPL 1329
S+ +E F ++S+GD +FG + + L ++RLA + A R L L PL
Sbjct: 720 SFPDLYANFLEHFEAVSFGDHLFGALILLPLQRRFSVTLRLALFGEHVGALRALGL--PL 777
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y P EDN +L+ Y ++ V+ AL V Y +AV H++SFIF+ P
Sbjct: 778 TQLPVSLECYTAPPEDNLALLQLYFRALVTGALRPRWC--PVLYAVAVAHVNSFIFSQDP 835
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
+ K R+ L ++ L G +QH
Sbjct: 836 NNSDEIKAACRSMLQKTWLLTDEGLRQH 863
>ref|XP_641307.1| hypothetical protein DDB0206444 [Dictyostelium discoideum]
gi|60469337|gb|EAL67331.1| hypothetical protein
DDB0206444 [Dictyostelium discoideum]
Length = 1589
Score = 62.4 bits (150), Expect = 1e-07
Identities = 44/147 (29%), Positives = 66/147 (43%), Gaps = 18/147 (12%)
Query: 1246 NQNKEAISDDKKHIEFLRFKSDIHESYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCV 1305
N E +++ EF F+ + F +E ++ F S+S+ IF + V+L C
Sbjct: 1346 NDQMEIDGNEENDKEF-DFEGYFGSKFYQFYQEFIQHFVSVSFNSEIFSSFIWVFLRQCY 1404
Query: 1306 ESSIRLATWNTLSNARVLELLPPL-------EKCFSGAEGYLEPAEDNEEILEAYAKSWV 1358
R+ WN EL P L ++ G +GYL P E N E+L Y S +
Sbjct: 1405 NHRYRILFWN--------ELFPTLHYLNCSDQQLPLGNDGYLLPYELNTELLSLYKNSLI 1456
Query: 1359 SDALDRAEIRGSVSYTMAVHHLSSFIF 1385
+R + S Y +A+HHLS FIF
Sbjct: 1457 QKKTNRNQ--ASKLYLIAIHHLSHFIF 1481
Score = 58.2 bits (139), Expect = 2e-06
Identities = 77/419 (18%), Positives = 164/419 (38%), Gaps = 85/419 (20%)
Query: 139 DRMTDHSSTSEKNYFMHEQESTSLENE-IDSENRARIQQMSTEEIEEAKADIMEKISPAL 197
++ T+ +T ++ + +++ S+E I+ EN +++ MS +EI+E + +++ + P +
Sbjct: 199 NKQTNIENTQQQQQQISIKKAESIETTGIEQENNKKLEGMSEQEIKENQEYLLKHLDPKI 258
Query: 198 LKVLQKRGKEKLKKPNSLKSEVGAVTESVNQQ------------------------VQIT 233
+++L+ R + N++K E + T S N T
Sbjct: 259 VEMLKNRKSKTNDNKNNIKIEAESNTTSTNTSTTTTTTNTSTTTTNQTTTATTTATTTTT 318
Query: 234 QGAKHLQTED-------DISHTIMAPPSKKQLDDKNVSGKTSTTTSSSSWNAWSNRVEAI 286
+ K +Q +D D+ +I P++ + + + + +
Sbjct: 319 KTNKTVQFKDVEIENKADLESSIETKPTQSEPEYDETTIWMKDLDKQDERKGFKETILNF 378
Query: 287 RELRFSLAGDVVDT-EQEPVYDNIAERDYLRTEGDPGAAGYTIKEALEITRSVRALGLHL 345
RE RF+ G+++ P + + G AGYT+ E + + +S H
Sbjct: 379 REWRFNFTGEIIQRGSSTPTSQGLHHHG-----SEAGEAGYTLNEIIMLIKSSN----HS 429
Query: 346 LSSVLDKALCYICKDRTENMTKKGNK---VDKSVDWEAVWTYALGPQPELALSLRM*LDD 402
+ K L +I + NK +D+ + + P L LR+ +D
Sbjct: 430 QKCIALKTLTFILQKVHNGSYGSFNKLQLIDEILKLKI---------PRL---LRISIDS 477
Query: 403 NHNSVVLACAKVVQSALSCDVNENYFDISENMATYDKDICTAPVFRSRPDISLGFLQGGY 462
S++++ + + + + EN +++ E+ + R+ IS
Sbjct: 478 QVPSILISALTCIHALIVPTIKENAYEMIESRS-----------HRAYETIS-------- 518
Query: 463 WKYSAKPSNIQPFSEDSMDNESDDKHTIQDDVFVAGQDFTAGLVRMGILPRLRYLLETD 521
I+P S +S +++++ +DD D GLV MGI RL YL++ +
Sbjct: 519 ---------IKPISMESKKQKNEEEEPEKDDDEKCQLDLIRGLVDMGITNRLVYLMDNE 568
>gb|AAH12218.1| Rpap1 protein [Mus musculus]
Length = 295
Score = 54.3 bits (129), Expect = 3e-05
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNARVLELLP-PL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + + VL L PL
Sbjct: 108 SFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFG--EHVGVLRALGLPL 165
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y EPAED+ +L+ Y ++ V+ +L RA + YT+AV H++SFIF P
Sbjct: 166 TQLPVPLECYTEPAEDSLPLLQLYFRALVTGSL-RAR-WCPILYTVAVAHVNSFIFCQDP 223
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L R+ L G +QH
Sbjct: 224 KSSDEVKTARRSMLQRTWLLTDEGLRQH 251
>gb|AAH51680.1| Rpap1 protein [Mus musculus]
Length = 799
Score = 54.3 bits (129), Expect = 3e-05
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 1271 SYSTFIEELVEQFSSISYGDLIFGRQVSVYLHCCVESSIRLATWNTLSNARVLELLP-PL 1329
S+ ++ F ++S+GD +FG V + L ++RLA + + VL L PL
Sbjct: 612 SFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFG--EHVGVLRALGLPL 669
Query: 1330 EKCFSGAEGYLEPAEDNEEILEAYAKSWVSDALDRAEIRGSVSYTMAVHHLSSFIFNACP 1389
+ E Y EPAED+ +L+ Y ++ V+ +L RA + YT+AV H++SFIF P
Sbjct: 670 TQLPVPLECYTEPAEDSLPLLQLYFRALVTGSL-RAR-WCPILYTVAVAHVNSFIFCQDP 727
Query: 1390 VD----KLLLRNNLVRSLLRDYAGKQQH 1413
K R+ L R+ L G +QH
Sbjct: 728 KSSDEVKTARRSMLQRTWLLTDEGLRQH 755
>emb|CAI42674.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
homolog, S. cerevisiae) [Homo sapiens]
gi|57208647|emb|CAI40710.1| alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S.
cerevisiae) [Homo sapiens] gi|57284090|emb|CAI43115.1|
alpha thalassemia/mental retardation syndrome X-linked
(RAD54 homolog, S. cerevisiae) [Homo sapiens]
gi|6960326|gb|AAB49970.2| putative DNA dependent ATPase
and helicase [Homo sapiens] gi|20336209|ref|NP_000480.2|
transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 52.8 bits (125), Expect = 9e-05
Identities = 62/278 (22%), Positives = 109/278 (38%), Gaps = 42/278 (15%)
Query: 15 RKKTKGMDFGKWREKKTKGMDFGKWREFTQDDKSFLGKDLEKDVSSYGPTTGRKKNENGG 74
+ T G DF + K K K + TQ + S +LEK++ S
Sbjct: 782 KSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSMSKI-------GAA 834
Query: 75 KNTSKKISSYSDGSVFASMEVDAKPQLVKLDGGFINSATSME--LDTSNKDDKKEVFAAE 132
+ T K+I + D F S E + + + G N TS E D + + ++E F++
Sbjct: 835 RTTKKRIPNTKD---FDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFSSA 891
Query: 133 -------------RDKIFSDRMTDHSSTSEKNYFMHEQESTSLENEIDSENRARIQQMST 179
RD++ + S+ EQ TSLE +E + + + + T
Sbjct: 892 EGTVDKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKT 951
Query: 180 ---EEIEEAKADIMEKI--------SPALLKVLQKRGKEKLKKPNSLKSEVGAVTESVNQ 228
+++++ +DI EK + K K+G E+ KKP+ K + V + Q
Sbjct: 952 KTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKK---VIKMEQQ 1008
Query: 229 QVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGK 266
+ G + L ++I H P KQ+ + G+
Sbjct: 1009 YESSSDGTEKLPEREEICH---FPKGIKQIKNGTTDGE 1043
>emb|CAI42675.1| alpha thalassemia/mental retardation syndrome X-linked (RAD54
homolog, S. cerevisiae) [Homo sapiens]
gi|57208648|emb|CAB90351.2| alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S.
cerevisiae) [Homo sapiens] gi|57284091|emb|CAI43116.1|
alpha thalassemia/mental retardation syndrome X-linked
(RAD54 homolog, S. cerevisiae) [Homo sapiens]
gi|6960328|gb|AAB49971.2| putative DNA dependent ATPase
and helicase [Homo sapiens] gi|20336205|ref|NP_612114.1|
transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 52.8 bits (125), Expect = 9e-05
Identities = 62/278 (22%), Positives = 109/278 (38%), Gaps = 42/278 (15%)
Query: 15 RKKTKGMDFGKWREKKTKGMDFGKWREFTQDDKSFLGKDLEKDVSSYGPTTGRKKNENGG 74
+ T G DF + K K K + TQ + S +LEK++ S
Sbjct: 744 KSSTSGSDFDTKKGKSAKSSIISKKKRQTQSESSNYDSELEKEIKSMSKI-------GAA 796
Query: 75 KNTSKKISSYSDGSVFASMEVDAKPQLVKLDGGFINSATSME--LDTSNKDDKKEVFAAE 132
+ T K+I + D F S E + + + G N TS E D + + ++E F++
Sbjct: 797 RTTKKRIPNTKD---FDSSEDEKHSKKGMDNQGHKNLKTSQEGSSDDAERKQERETFSSA 853
Query: 133 -------------RDKIFSDRMTDHSSTSEKNYFMHEQESTSLENEIDSENRARIQQMST 179
RD++ + S+ EQ TSLE +E + + + + T
Sbjct: 854 EGTVDKDTTIMELRDRLPKKQQASASTDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKT 913
Query: 180 ---EEIEEAKADIMEKI--------SPALLKVLQKRGKEKLKKPNSLKSEVGAVTESVNQ 228
+++++ +DI EK + K K+G E+ KKP+ K + V + Q
Sbjct: 914 KTCKKVQDGLSDIAEKFLKKDQSDETSEDDKKQSKKGTEEKKKPSDFKKK---VIKMEQQ 970
Query: 229 QVQITQGAKHLQTEDDISHTIMAPPSKKQLDDKNVSGK 266
+ G + L ++I H P KQ+ + G+
Sbjct: 971 YESSSDGTEKLPEREEICH---FPKGIKQIKNGTTDGE 1005
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.134 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,462,736,867
Number of Sequences: 2540612
Number of extensions: 103851625
Number of successful extensions: 306871
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 450
Number of HSP's that attempted gapping in prelim test: 305715
Number of HSP's gapped (non-prelim): 1238
length of query: 1477
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1336
effective length of database: 505,134,102
effective search space: 674859160272
effective search space used: 674859160272
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)
Medicago: description of AC135101.10