BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134822.4 - phase: 0
(290 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC85247.1| salt tolerance protein 5 [Beta vulgaris] 345 9e-94
gb|AAM65278.1| unknown [Arabidopsis thaliana] 330 3e-89
dbj|BAA97317.1| unnamed protein product [Arabidopsis thaliana] g... 330 3e-89
emb|CAB81438.1| putative protein [Arabidopsis thaliana] gi|49721... 309 7e-83
dbj|BAD37282.1| putative salt tolerance protein 5 [Oryza sativa ... 300 2e-80
ref|XP_590940.1| PREDICTED: similar to nuclear distribution gene... 216 5e-55
ref|NP_035078.1| nuclear distribution gene C homolog [Mus muscul... 212 1e-53
ref|XP_316177.2| ENSANGP00000019739 [Anopheles gambiae str. PEST... 210 4e-53
ref|NP_058967.1| nuclear distribution gene C homolog [Rattus nor... 209 6e-53
gb|AAH70681.1| MGC83068 protein [Xenopus laevis] 209 7e-53
emb|CAE56549.1| Hypothetical protein CBG24281 [Caenorhabditis br... 209 7e-53
gb|AAP97152.1| SIG-92 [Homo sapiens] gi|55959151|emb|CAI13561.1|... 209 1e-52
ref|NP_001006311.1| similar to nuclear distribution gene C homol... 209 1e-52
gb|AAH82700.1| LOC494725 protein [Xenopus laevis] 208 1e-52
gb|AAF72649.1| putative nuclear movement protein PNUDC [Pleurode... 207 2e-52
emb|CAB66659.1| hypothetical protein [Homo sapiens] 206 6e-52
emb|CAB04452.1| Hypothetical protein F53A2.4 [Caenorhabditis ele... 205 1e-51
gb|AAX70660.1| hypothetical protein, conserved [Trypanosoma brucei] 203 5e-51
gb|AAH68353.1| Nudc protein [Danio rerio] 203 5e-51
gb|AAH45909.1| Nuclear distribution gene C homolog [Danio rerio]... 202 1e-50
>emb|CAC85247.1| salt tolerance protein 5 [Beta vulgaris]
Length = 295
Score = 345 bits (885), Expect = 9e-94
Identities = 177/303 (58%), Positives = 222/303 (72%), Gaps = 21/303 (6%)
Query: 1 MAIISDYQDETQTPSSSSQPKPSKTIPFSSTFDPSKPTAFLEKVFDFIAKESTDFFDKDS 60
MAI+SDY++E P + +PSK FS+TFDPS P FL+ +F++KES DFF K+S
Sbjct: 1 MAILSDYEEEEHQPQPEKK-QPSKK--FSATFDPSNPLGFLQSTLEFVSKES-DFFAKES 56
Query: 61 AEKMVLSAVRAAKVKKAKAVAAEKAKIASQEKAKAAAGI-------------KVNDEKSG 107
+ K V+S V+ K K + V +K K+ + A AAA KV+D +S
Sbjct: 57 SAKDVVSLVQKVKEKYIEEVENKKKKLLDESAAAAAAAAAAAASSSSSDLEKKVDDNESA 116
Query: 108 VGTEKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLK 167
TEK S APN GNG DLE YSW Q+LQE+ VNVPVP GTKS F+ C+IKKNHLK
Sbjct: 117 EETEK----SKYKAPNSGNGQDLENYSWIQSLQEVTVNVPVPPGTKSRFIDCQIKKNHLK 172
Query: 168 VGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQK 227
VGLKGQPPIIDGEL+K +K D+C+WS+EDQ ++S+LLTKHDQM+WW+ LVKG+P I+TQK
Sbjct: 173 VGLKGQPPIIDGELFKPVKPDDCFWSLEDQKSISMLLTKHDQMEWWRSLVKGEPEIDTQK 232
Query: 228 VEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGA 287
VEPESSKL +LD ETR TVEKMMFDQRQKSMGLPTS++++KQ+M+KKFMS+HP MDFS A
Sbjct: 233 VEPESSKLSDLDPETRSTVEKMMFDQRQKSMGLPTSDDMQKQDMLKKFMSEHPEMDFSNA 292
Query: 288 KLS 290
K +
Sbjct: 293 KFN 295
>gb|AAM65278.1| unknown [Arabidopsis thaliana]
Length = 304
Score = 330 bits (846), Expect = 3e-89
Identities = 177/312 (56%), Positives = 217/312 (68%), Gaps = 30/312 (9%)
Query: 1 MAIISDYQDETQTPSSSSQPKPSKTIPFSSTFDPSKPTAFLEKVFDFIAKESTDFFDKDS 60
MAIIS+ ++E SSSS+P PF +T + P FLEKVFDF+ ++S DF K S
Sbjct: 1 MAIISEVEEE----SSSSRPM---IFPFRATLSSANPLGFLEKVFDFLGEQS-DFLKKPS 52
Query: 61 AEKMVLSAVRAAK--VKKAKAVAAEKAKIASQEKAKAAAGIKVND---EKSGVGT----- 110
AE ++ AVRAAK +KKA+ AEK + EK +K+ + EK V
Sbjct: 53 AEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKESVKPTMAAS 112
Query: 111 ------------EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVI 158
E++ ESG PN+GNG DLE YSW Q LQE+ VN+PVP GTK+ V+
Sbjct: 113 SAEPIEVEKPKDEEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIPVPTGTKARTVV 172
Query: 159 CEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVK 218
CEIKKN LKVGLKGQ PI+DGELY+ +K D+CYW+IEDQ +SILLTK DQM+WWKC VK
Sbjct: 173 CEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKSDQMEWWKCCVK 232
Query: 219 GDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQ 278
G+P I+TQKVEPE+SKLG+LD ETR TVEKMMFDQRQK MGLPTSEEL+KQE++KKFMS+
Sbjct: 233 GEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQKQEILKKFMSE 292
Query: 279 HPNMDFSGAKLS 290
HP MDFS AK +
Sbjct: 293 HPEMDFSNAKFN 304
>dbj|BAA97317.1| unnamed protein product [Arabidopsis thaliana]
gi|27765036|gb|AAO23639.1| At5g53400 [Arabidopsis
thaliana] gi|15238732|ref|NP_200152.1| nuclear movement
family protein [Arabidopsis thaliana]
Length = 304
Score = 330 bits (846), Expect = 3e-89
Identities = 177/312 (56%), Positives = 217/312 (68%), Gaps = 30/312 (9%)
Query: 1 MAIISDYQDETQTPSSSSQPKPSKTIPFSSTFDPSKPTAFLEKVFDFIAKESTDFFDKDS 60
MAIIS+ ++E SSSS+P PF +T + P FLEKVFDF+ ++S DF K S
Sbjct: 1 MAIISEVEEE----SSSSRPM---IFPFRATLSSANPLGFLEKVFDFLGEQS-DFLKKPS 52
Query: 61 AEKMVLSAVRAAK--VKKAKAVAAEKAKIASQEKAKAAAGIKVND---EKSGVGT----- 110
AE ++ AVRAAK +KKA+ AEK + EK +K+ + EK V
Sbjct: 53 AEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKESVKPTIAAS 112
Query: 111 ------------EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVI 158
E++ ESG PN+GNG DLE YSW Q LQE+ VN+PVP GTK+ V+
Sbjct: 113 SAEPIEVEKPKEEEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIPVPTGTKARTVV 172
Query: 159 CEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVK 218
CEIKKN LKVGLKGQ PI+DGELY+ +K D+CYW+IEDQ +SILLTK DQM+WWKC VK
Sbjct: 173 CEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKSDQMEWWKCCVK 232
Query: 219 GDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQ 278
G+P I+TQKVEPE+SKLG+LD ETR TVEKMMFDQRQK MGLPTSEEL+KQE++KKFMS+
Sbjct: 233 GEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQKQEILKKFMSE 292
Query: 279 HPNMDFSGAKLS 290
HP MDFS AK +
Sbjct: 293 HPEMDFSNAKFN 304
>emb|CAB81438.1| putative protein [Arabidopsis thaliana] gi|4972120|emb|CAB43977.1|
putative protein [Arabidopsis thaliana]
gi|23296480|gb|AAN13067.1| unknown protein [Arabidopsis
thaliana] gi|15234308|ref|NP_194518.1| nuclear movement
family protein [Arabidopsis thaliana]
gi|7487473|pir||T09028 hypothetical protein T27E11.130 -
Arabidopsis thaliana
Length = 293
Score = 309 bits (791), Expect = 7e-83
Identities = 158/291 (54%), Positives = 209/291 (71%), Gaps = 17/291 (5%)
Query: 15 SSSSQPKPSKTIPFSSTFDPSKPTAFLEKVFDFIAKESTDFFDKDSAEKMVLSAVRAAK- 73
S + +PS +PF+++FDPS P AFLEKV D I KES +F KD+AEK +++AV AAK
Sbjct: 5 SEMEEARPSM-VPFTASFDPSNPIAFLEKVLDVIGKES-NFLKKDTAEKEIVAAVMAAKQ 62
Query: 74 -VKKAKAVAAEKAKIASQEKAKAAAG------IKVNDEKSGVGTE-------KKDGESGL 119
+++A+ EK + S E K ++ E+S + T+ K++ ESG
Sbjct: 63 RLREAEKKKLEKESVKSMEVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESGP 122
Query: 120 AAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLKVGLKGQPPIIDG 179
PN+GNG+D EKYSW Q LQE+ +N+P+P GTKS V CEIKKN LKVGLKGQ I+DG
Sbjct: 123 IVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDG 182
Query: 180 ELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKVEPESSKLGELD 239
E + +K D+C+W+IEDQ +S+LLTK DQM+WWK VKG+P I+TQKVEPE+SKLG+LD
Sbjct: 183 EFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLD 242
Query: 240 SETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAKLS 290
ETR +VEKMMFDQRQK MGLP S+E+EK++M+KKFM+Q+P MDFS AK +
Sbjct: 243 PETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293
>dbj|BAD37282.1| putative salt tolerance protein 5 [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 300 bits (769), Expect = 2e-80
Identities = 160/310 (51%), Positives = 202/310 (64%), Gaps = 22/310 (7%)
Query: 1 MAIISDYQDETQTPSSSSQPKP-------SKTIPFSSTFDPSKPTAFLEKVFDFIAKEST 53
MAIISD+Q+E P QP + + FL+ D +A+ +
Sbjct: 1 MAIISDFQEEEAPPRQQQQPASVAAAAGSGDEVLAAELERRGGAIPFLQAAID-VARRRS 59
Query: 54 DFFDKDSAEKMVLSAVRAAKV-----------KKAKAVAAEKAKIASQEKAKAAAGIKVN 102
D F SA V S AA+ K KA AE+ ++ KAKA A K
Sbjct: 60 DLFRDPSAVSRVTSMASAARAVVEAEERKAREAKRKAEEAERKAAEAERKAKAPAEPKPE 119
Query: 103 DE--KSGVGTEKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICE 160
K + +KK+ E + PN GNG+DLEKYSW Q L E+ + VPVP GTKS FV+C+
Sbjct: 120 SSAGKDSMEVDKKE-EGNVRKPNAGNGLDLEKYSWIQQLPEVTITVPVPQGTKSRFVVCD 178
Query: 161 IKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGD 220
IKKNHLKVGLKGQPPIIDGEL+K +K D+C+WSIED ++SILLTK +QM+WWK +VKGD
Sbjct: 179 IKKNHLKVGLKGQPPIIDGELFKPVKVDDCFWSIEDGKSLSILLTKQNQMEWWKSVVKGD 238
Query: 221 PLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHP 280
P ++TQKVEPE+SKL +LD ETR TVEKMMFDQRQK MGLPTS+E++KQ+M+KKFM+QHP
Sbjct: 239 PEVDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKQMGLPTSDEMQKQDMLKKFMAQHP 298
Query: 281 NMDFSGAKLS 290
MDFS AK++
Sbjct: 299 EMDFSNAKIA 308
>ref|XP_590940.1| PREDICTED: similar to nuclear distribution gene C homolog (A.
nidulans) [Bos taurus]
Length = 400
Score = 216 bits (551), Expect = 5e-55
Identities = 122/264 (46%), Positives = 167/264 (63%), Gaps = 19/264 (7%)
Query: 45 FDFIAKESTDFF---DKDSAEKMVLS--------AVRAAKVKKAKAVAA--EKAKIASQE 91
F F+ ++ TDFF ++ AEK++ A +A + K+A+ EK K A +
Sbjct: 138 FSFLRRK-TDFFVGGEEGMAEKLITQTFNHHNQLAQKARREKRARQETERREKKKDAENQ 196
Query: 92 KAKAAAGIKVNDEKSGVGTEKKDGES---GLAAPNQGNGMDLEKYSWTQTLQELNVNVP- 147
+A+ G + K E+++ + G PN GNG DL Y WTQTL EL++ VP
Sbjct: 197 EAQLKNGSLGSPGKQEAEEEEEEDDEKDKGKLKPNLGNGADLPSYRWTQTLSELDLAVPF 256
Query: 148 -VPNGTKSGFVICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTK 206
V K V+ +I++ HL+VGLKGQP I+DGELY +K +E W IED V++ L K
Sbjct: 257 CVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDGELYNEVKVEESSWLIEDGKVVTVHLEK 316
Query: 207 HDQMDWWKCLVKGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEEL 266
++M+WW LV DP INT+K+ PE+SKL +LDSETR VEKMM+DQRQKSMGLPTS+E
Sbjct: 317 INKMEWWSRLVSSDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQ 376
Query: 267 EKQEMMKKFMSQHPNMDFSGAKLS 290
+KQE++KKFM QHP MDFS A+ +
Sbjct: 377 KKQEILKKFMDQHPEMDFSKARFN 400
>ref|NP_035078.1| nuclear distribution gene C homolog [Mus musculus]
gi|2654358|emb|CAA75677.1| MNUDC protein [Mus musculus]
gi|2808636|emb|CAA57201.1| Sig 92 [Mus musculus]
gi|15030022|gb|AAH11253.1| Nuclear distribution gene C
homolog [Mus musculus] gi|62286986|sp|O35685|NUDC_MOUSE
Nuclear migration protein nudC (Nuclear distribution
protein C homolog) (Silica-induced gene 92 protein)
(SIG-92) gi|26328485|dbj|BAC27981.1| unnamed protein
product [Mus musculus]
Length = 332
Score = 212 bits (539), Expect = 1e-53
Identities = 103/182 (56%), Positives = 132/182 (71%), Gaps = 2/182 (1%)
Query: 111 EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVP--VPNGTKSGFVICEIKKNHLKV 168
E+ + + G PN GNG DL Y WTQTL EL++ VP V K V+ +I++ HL+V
Sbjct: 151 EEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRV 210
Query: 169 GLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKV 228
GLKGQPP++DGELY +K +E W IED V++ L K ++M+WW LV DP INT+K+
Sbjct: 211 GLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKI 270
Query: 229 EPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAK 288
PE+SKL +LDSETR VEKMM+DQRQKSMGLPTS+E +KQE++KKFM QHP MDFS AK
Sbjct: 271 NPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 330
Query: 289 LS 290
+
Sbjct: 331 FN 332
>ref|XP_316177.2| ENSANGP00000019739 [Anopheles gambiae str. PEST]
gi|55238929|gb|EAA10911.2| ENSANGP00000019739 [Anopheles
gambiae str. PEST]
Length = 328
Score = 210 bits (534), Expect = 4e-53
Identities = 111/216 (51%), Positives = 142/216 (65%), Gaps = 4/216 (1%)
Query: 78 KAVAAEKAKIASQEKAKAAAGIKVNDEKSGVGTEKKD-GESGLAAPNQGNGMDLEKYSWT 136
K + A+K K A K + + K+G TE + G+ G PN+GNG DL+KYSWT
Sbjct: 114 KELDAKKQKAAEPAVEKVVPAEESKENKAGSDTEDVEPGDEGKLKPNRGNGCDLDKYSWT 173
Query: 137 QTLQELNVNVP--VPNGTKSGFVICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSI 194
QTLQEL + VP V K+ V+ I++ HLKVGLKG P IIDGEL IK ++ W +
Sbjct: 174 QTLQELELRVPFDVKFTLKAKDVVVSIQRKHLKVGLKGHPAIIDGELCSEIKIEDSLWHL 233
Query: 195 EDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQR 254
E + V + + K +QM+WW LV DP INT+K+ PESSKL +LD TR VEKMM+DQR
Sbjct: 234 EKNAVV-VTVEKINQMNWWDRLVTTDPPINTRKINPESSKLSDLDGSTRSMVEKMMYDQR 292
Query: 255 QKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAKLS 290
QK MGLPTS+E +KQ+M+KKFM QHP MDFS K +
Sbjct: 293 QKEMGLPTSDEQKKQDMLKKFMEQHPEMDFSKCKFT 328
>ref|NP_058967.1| nuclear distribution gene C homolog [Rattus norvegicus]
gi|619907|emb|CAA57825.1| RnudC [Rattus norvegicus]
gi|41351304|gb|AAH65581.1| Nuclear distribution gene C
homolog [Rattus norvegicus]
gi|62286960|sp|Q63525|NUDC_RAT Nuclear migration protein
nudC (Nuclear distribution protein C homolog) (c15)
Length = 332
Score = 209 bits (533), Expect = 6e-53
Identities = 103/182 (56%), Positives = 131/182 (71%), Gaps = 2/182 (1%)
Query: 111 EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVP--VPNGTKSGFVICEIKKNHLKV 168
E+ + + G PN GNG DL Y WTQTL EL++ VP V K V+ +I++ HL+V
Sbjct: 151 EEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFRVSFRLKGKDVVVDIQRRHLRV 210
Query: 169 GLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKV 228
GLKGQ P+IDGELY +K +E W IED V++ L K ++M+WW LV DP INT+K+
Sbjct: 211 GLKGQAPVIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINTKKI 270
Query: 229 EPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAK 288
PE+SKL +LDSETR VEKMM+DQRQKSMGLPTS+E +KQE++KKFM QHP MDFS AK
Sbjct: 271 NPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 330
Query: 289 LS 290
+
Sbjct: 331 FN 332
>gb|AAH70681.1| MGC83068 protein [Xenopus laevis]
Length = 329
Score = 209 bits (532), Expect = 7e-53
Identities = 109/223 (48%), Positives = 147/223 (65%), Gaps = 7/223 (3%)
Query: 75 KKAKAVAAEKAKIASQEKAKAAAGIKVNDEKSGVGTEKKDGES-----GLAAPNQGNGMD 129
++A+ + E K ++EKA + K+ EK+G E++ GE G PN GNG D
Sbjct: 107 EEAERLQKEIDKNKAREKATSETEEKLEPEKNGEEKEEEGGEEDEKDKGKLKPNSGNGAD 166
Query: 130 LEKYSWTQTLQELNVNVPVPNG--TKSGFVICEIKKNHLKVGLKGQPPIIDGELYKFIKA 187
L Y WTQTL E+++ VP P K V +I++ L VGL+GQ P++DGEL+ IK
Sbjct: 167 LPHYRWTQTLSEVDLIVPFPVSFRLKGKDVQVDIRRRRLTVGLRGQKPVLDGELFNDIKV 226
Query: 188 DECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKVEPESSKLGELDSETRMTVE 247
+EC W IED V++ L K + M+WW +V DP I+T+K+ PE+SKL +LD ETR VE
Sbjct: 227 EECSWLIEDGKVVTVHLEKINTMEWWSRIVLTDPEISTRKINPENSKLSDLDGETRSMVE 286
Query: 248 KMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAKLS 290
KMM+DQRQKSMGLPTS+E +KQ+++KKFM QHP MDFS AK S
Sbjct: 287 KMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFS 329
>emb|CAE56549.1| Hypothetical protein CBG24281 [Caenorhabditis briggsae]
Length = 311
Score = 209 bits (532), Expect = 7e-53
Identities = 106/237 (44%), Positives = 152/237 (63%), Gaps = 5/237 (2%)
Query: 58 KDSAEKMVLSAVRAAKVKKAKAV--AAEKAKIASQEKAKAAAGIKVNDEKSGVGTE-KKD 114
K+ EK + A K K+ + A++ +++ +E A+ K +E T+ K+D
Sbjct: 74 KEEQEKKLAERRAAQKAKEEEEFKNASKVVEVSDEEAAEFERKQKEKEEAPESTTDTKED 133
Query: 115 GESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNG--TKSGFVICEIKKNHLKVGLKG 172
GE L PN GNG DL KY WTQTLQE+ +P+ G KS V+ +I+K + VGLK
Sbjct: 134 GEESLMKPNSGNGADLAKYQWTQTLQEVECRIPINAGFAIKSRDVVVKIEKTSVSVGLKN 193
Query: 173 QPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKVEPES 232
QPP+++G+L +K + C W IE+ + + L K + M+WW + DP INT++V+PE+
Sbjct: 194 QPPVVEGKLANAVKVENCNWVIENGKAIVLSLEKVNDMEWWNRFLDTDPSINTKEVQPEN 253
Query: 233 SKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAKL 289
SKL +LD ETR VEKMM+DQRQK MGLPTS+E +KQ+M+++FM QHP MDFS AK+
Sbjct: 254 SKLSDLDGETRAMVEKMMYDQRQKEMGLPTSDEKKKQDMLQQFMKQHPEMDFSNAKI 310
>gb|AAP97152.1| SIG-92 [Homo sapiens] gi|55959151|emb|CAI13561.1| nuclear
distribution gene C homolog (A. nidulans) [Homo sapiens]
gi|12803187|gb|AAH02399.1| NUDC protein [Homo sapiens]
gi|13544023|gb|AAH06147.1| Nuclear distribution gene C
homolog (A. nidulans) [Homo sapiens]
gi|15929442|gb|AAH15153.1| Nuclear distribution gene C
homolog (A. nidulans) [Homo sapiens]
gi|18088935|gb|AAH21139.1| Nuclear distribution gene C
homolog (A. nidulans) [Homo sapiens]
gi|13938303|gb|AAH07280.1| Nuclear distribution gene C
homolog (A. nidulans) [Homo sapiens]
gi|5729953|ref|NP_006591.1| nuclear distribution gene C
homolog (A. nidulans) [Homo sapiens]
gi|13111923|gb|AAH03132.1| Nuclear distribution gene C
homolog (A. nidulans) [Homo sapiens]
gi|4836670|gb|AAD30517.1| nuclear distribution protein C
homolog [Homo sapiens] gi|5107004|gb|AAD39921.1| nuclear
distribution protein [Homo sapiens]
gi|5410306|gb|AAD43024.1| MNUDC protein [Homo sapiens]
gi|62287138|sp|Q9Y266|NUDC_HUMAN Nuclear migration
protein nudC (Nuclear distribution protein C homolog)
Length = 331
Score = 209 bits (531), Expect = 1e-52
Identities = 103/182 (56%), Positives = 131/182 (71%), Gaps = 2/182 (1%)
Query: 111 EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVP--VPNGTKSGFVICEIKKNHLKV 168
E+ + + G PN GNG DL Y WTQTL EL++ VP V K ++ +I++ HL+V
Sbjct: 150 EEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRV 209
Query: 169 GLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKV 228
GLKGQP IIDGELY +K +E W IED V++ L K ++M+WW LV DP INT+K+
Sbjct: 210 GLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKI 269
Query: 229 EPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAK 288
PE+SKL +LDSETR VEKMM+DQRQKSMGLPTS+E +KQE++KKFM QHP MDFS AK
Sbjct: 270 NPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 329
Query: 289 LS 290
+
Sbjct: 330 FN 331
>ref|NP_001006311.1| similar to nuclear distribution gene C homolog; clone 15 [Gallus
gallus] gi|53135290|emb|CAG32412.1| hypothetical protein
[Gallus gallus] gi|62287016|sp|Q5ZIN1|NUDC_CHICK Nuclear
migration protein nudC (Nuclear distribution protein C
homolog)
Length = 341
Score = 209 bits (531), Expect = 1e-52
Identities = 101/182 (55%), Positives = 131/182 (71%), Gaps = 2/182 (1%)
Query: 111 EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVP--VPNGTKSGFVICEIKKNHLKV 168
EK + + G PN GNG DL Y WTQTL EL++ +P V K V+ +I++ L+V
Sbjct: 160 EKDENDKGKLKPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRV 219
Query: 169 GLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKV 228
GLKG PP+IDGEL+ +K +E W IED TV++ L K ++M+WW LV DP INT+K+
Sbjct: 220 GLKGHPPVIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKI 279
Query: 229 EPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAK 288
PE+SKL +LDSETR VEKMM+DQRQKSMGLPTS+E +KQ+++KKFM QHP MDFS AK
Sbjct: 280 NPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAK 339
Query: 289 LS 290
+
Sbjct: 340 FN 341
>gb|AAH82700.1| LOC494725 protein [Xenopus laevis]
Length = 327
Score = 208 bits (530), Expect = 1e-52
Identities = 114/254 (44%), Positives = 149/254 (57%), Gaps = 20/254 (7%)
Query: 57 DKDSAEKMVLSAVRAAKVKKAKAVAAEKAKIASQEKAKAAAGIKVNDEKSGV-------- 108
D D E+ R K K A+ + ++ +E + I N E+
Sbjct: 74 DVDRQEREAARREREVKKKAAEVGESRITELTDEEAERLQKEIDKNKERENATNETEEKP 133
Query: 109 -----GTEKKDGES-----GLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNG--TKSGF 156
G E+++GE G PN GNG DL Y WTQTL E+++ VP P K
Sbjct: 134 EPEKNGEEEEEGEEDEKDKGKLKPNSGNGADLPHYRWTQTLSEVDMIVPFPVSFRLKGKD 193
Query: 157 VICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCL 216
V +IK+ L VGL+GQ P++DGEL+ IK +EC W IED V++ L K + M+WW +
Sbjct: 194 VQVDIKRRRLTVGLRGQKPVLDGELFNDIKVEECSWLIEDGKVVTVHLEKINTMEWWSRI 253
Query: 217 VKGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFM 276
V DP INT+K+ PE+SKL +LD ETR VEKMM+DQRQKSMGLPTS+E +KQ++MKKFM
Sbjct: 254 VLTDPEINTKKINPENSKLSDLDGETRSMVEKMMYDQRQKSMGLPTSDEQKKQDIMKKFM 313
Query: 277 SQHPNMDFSGAKLS 290
QHP MDFS AK S
Sbjct: 314 EQHPEMDFSKAKFS 327
>gb|AAF72649.1| putative nuclear movement protein PNUDC [Pleurodeles waltl]
Length = 346
Score = 207 bits (528), Expect = 2e-52
Identities = 117/253 (46%), Positives = 161/253 (63%), Gaps = 16/253 (6%)
Query: 49 AKESTDFFDKDSAEKMVLSAVRAAKVKKAKAVAAE-KAKIASQEKAKAAAGI-------K 100
AK++ D ++S K +R ++A+ + E K AS+ + + GI K
Sbjct: 99 AKQAADMKREESEPK-----IRELTDEEAEQLQLEIDQKKASESQQASGNGITQTPTELK 153
Query: 101 VNDEKSGVGTEKKDG-ESGLAAPNQGNGMDLEKYSWTQTLQELNVNVP--VPNGTKSGFV 157
+ KSG +E++D + G PN GNG DL Y WTQTL E+++ VP V K V
Sbjct: 154 DPETKSGADSEEEDEKDKGKLRPNSGNGADLPLYRWTQTLSEVDLVVPLNVSFRLKGKDV 213
Query: 158 ICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLV 217
+ +I++ LKVGLKGQ P+IDGELY +K +E W IED +++ L K ++M+WW +V
Sbjct: 214 VVDIQRRILKVGLKGQAPVIDGELYNEVKVEESSWLIEDGKVITVHLEKINKMEWWSRIV 273
Query: 218 KGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMS 277
DP INT+K+ PE+SKL +LDSETR VEKMM+DQRQKSMGLPTSEE +KQ+++KKFM
Sbjct: 274 STDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSEEQKKQDILKKFME 333
Query: 278 QHPNMDFSGAKLS 290
QHP MDF AK +
Sbjct: 334 QHPEMDFFKAKFN 346
>emb|CAB66659.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 206 bits (524), Expect = 6e-52
Identities = 102/182 (56%), Positives = 130/182 (71%), Gaps = 2/182 (1%)
Query: 111 EKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVP--VPNGTKSGFVICEIKKNHLKV 168
E+ + + G PN GNG D Y WTQTL EL++ VP V K ++ +I++ HL+V
Sbjct: 150 EEDEKDKGKLKPNLGNGADPPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRV 209
Query: 169 GLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKV 228
GLKGQP IIDGELY +K +E W IED V++ L K ++M+WW LV DP INT+K+
Sbjct: 210 GLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKI 269
Query: 229 EPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAK 288
PE+SKL +LDSETR VEKMM+DQRQKSMGLPTS+E +KQE++KKFM QHP MDFS AK
Sbjct: 270 NPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKAK 329
Query: 289 LS 290
+
Sbjct: 330 FN 331
>emb|CAB04452.1| Hypothetical protein F53A2.4 [Caenorhabditis elegans]
gi|17553534|ref|NP_499749.1| aspergillus NUclear
Division related, evolutionarily conserved nuclear
migration gene required for embryonic development (36.4
kD) (nud-1) [Caenorhabditis elegans]
gi|7503992|pir||T22528 hypothetical protein F53A2.4 -
Caenorhabditis elegans gi|9081901|gb|AAF82633.1| NUD-1
[Caenorhabditis elegans]
Length = 320
Score = 205 bits (521), Expect = 1e-51
Identities = 111/255 (43%), Positives = 156/255 (60%), Gaps = 15/255 (5%)
Query: 50 KESTDFFDKDSAEKMVLSAVRAAKVKK-------AKAVAAEKAKIASQEKAKAAAGIKV- 101
KE+ + + ++ L+ RAA+ K AK V + A+ EK +A ++
Sbjct: 65 KEAEEAKKRKEEQERKLAERRAAQKAKEEEEFRNAKVVEVTDEEAAAFEKEQAKNSVENL 124
Query: 102 -----NDEKSGVGTEKKDGESGLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNG--TKS 154
N+ ++ E +D +S L PN GNG DL KY WTQTLQEL V +P+ G KS
Sbjct: 125 EKFVDNEGETSKDAEVEDEDSKLMKPNSGNGADLAKYQWTQTLQELEVKIPIAAGFAIKS 184
Query: 155 GFVICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWK 214
V+ +I+K + VGLK Q PI+DG+L IK + C W IE+ + + L K + M+WW
Sbjct: 185 RDVVVKIEKTSVSVGLKNQAPIVDGKLPHAIKVENCNWVIENGKAIVLTLEKINDMEWWN 244
Query: 215 CLVKGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKK 274
+ DP INT++V+PE+SKL +LD ETR VEKMM+DQRQK MGLPTS+E +K +M+++
Sbjct: 245 RFLDSDPPINTKEVKPENSKLSDLDGETRAMVEKMMYDQRQKEMGLPTSDEKKKHDMLQQ 304
Query: 275 FMSQHPNMDFSGAKL 289
FM QHP MDFS AK+
Sbjct: 305 FMKQHPEMDFSNAKI 319
>gb|AAX70660.1| hypothetical protein, conserved [Trypanosoma brucei]
Length = 297
Score = 203 bits (516), Expect = 5e-51
Identities = 109/236 (46%), Positives = 153/236 (64%), Gaps = 4/236 (1%)
Query: 57 DKDSAEKMVLSAVRAAKVKKAKAVAAEKAKIASQEKAKAAAGIKVNDEKSGVGTEKKDGE 116
+K ++ R +V+ + V A+ A A+ E AK A ++ E+ E +DG
Sbjct: 62 EKQRQKRKEAPVSRVEEVEDEEEVKAKAAAQAAAEAAKRKADLERKKEELANAKEDEDGA 121
Query: 117 S--GLAAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSGF-VICEIKKNHLKVGLKGQ 173
GL P GNG D E Y ++QTL+E+ V VP+ G V +++ L+VG+KG+
Sbjct: 122 KPKGLP-PTVGNGFDYEHYMFSQTLKEVEVRVPLLVARAKGKDVDVVLQQRRLRVGMKGK 180
Query: 174 PPIIDGELYKFIKADECYWSIEDQSTVSILLTKHDQMDWWKCLVKGDPLINTQKVEPESS 233
PPI+DGEL+ +K +E W+IED TV + LTK +QM+WWK ++ GD I+ QKV PE+S
Sbjct: 181 PPIVDGELFASVKTEESMWTIEDGHTVVVTLTKQNQMEWWKTVMVGDAEIDLQKVMPENS 240
Query: 234 KLGELDSETRMTVEKMMFDQRQKSMGLPTSEELEKQEMMKKFMSQHPNMDFSGAKL 289
KL +LD +TR TVEKMM+DQRQK+MGLPTSEE +K+EM+ KFM+ HP MDFS AK+
Sbjct: 241 KLDDLDGDTRQTVEKMMYDQRQKAMGLPTSEEQKKREMLAKFMAAHPEMDFSQAKI 296
>gb|AAH68353.1| Nudc protein [Danio rerio]
Length = 333
Score = 203 bits (516), Expect = 5e-51
Identities = 118/271 (43%), Positives = 161/271 (58%), Gaps = 32/271 (11%)
Query: 48 IAKESTDFFDKDSAEKMVLSAVRAAKVK----KAKAVAAEKAKIAS-----QEKAKAAAG 98
+ KE +K+ EK A RAAK+K K + + AE+ +I E+ ++
Sbjct: 67 VQKEKQSRQEKERKEK----AERAAKLKEEEMKKRKIDAEEPRIKELTDEEAERLQSQLQ 122
Query: 99 IKVNDEKSGVGTEKKDGES-----------------GLAAPNQGNGMDLEKYSWTQTLQE 141
K ++K+ EK D +S PN GNG DL Y WTQ+L E
Sbjct: 123 TKQEEQKNSEVAEKTDADSKDKKGSDSEGEEDEKDKDKVKPNAGNGADLPNYRWTQSLSE 182
Query: 142 LNVNVP--VPNGTKSGFVICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQST 199
+++ VP V K V+ ++++ LKVGLKG PP+IDG+L+ +K +E W IED
Sbjct: 183 VDLVVPFDVSFRLKGKDVVVDVQRRTLKVGLKGHPPLIDGQLFNEVKVEESSWLIEDGKV 242
Query: 200 VSILLTKHDQMDWWKCLVKGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMG 259
V+I K ++M+WW LV DP INT+K+ PE+SKL +LD ETR VEKMM+DQRQKSMG
Sbjct: 243 VTIHFEKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMG 302
Query: 260 LPTSEELEKQEMMKKFMSQHPNMDFSGAKLS 290
LPTSEE +KQ+++KKFM+QHP MDFS AK S
Sbjct: 303 LPTSEEQKKQDILKKFMAQHPEMDFSKAKFS 333
>gb|AAH45909.1| Nuclear distribution gene C homolog [Danio rerio]
gi|41055498|ref|NP_957213.1| nuclear distribution gene C
homolog [Danio rerio]
Length = 333
Score = 202 bits (513), Expect = 1e-50
Identities = 118/271 (43%), Positives = 160/271 (58%), Gaps = 32/271 (11%)
Query: 48 IAKESTDFFDKDSAEKMVLSAVRAAKVK----KAKAVAAEKAKIAS-----QEKAKAAAG 98
+ KE +K+ EK A RAAK+K K + + AE+ +I E+ ++
Sbjct: 67 VQKEKQSRQEKERKEK----AERAAKLKEEEMKKRKIDAEEPRIKELTDEEAERLQSQLQ 122
Query: 99 IKVNDEKSGVGTEKKDGES-----------------GLAAPNQGNGMDLEKYSWTQTLQE 141
K + K+ EK D +S PN GNG DL Y WTQ+L E
Sbjct: 123 TKQEEPKNSEVAEKTDADSKDKKGSDSEGEEDEKDKDKVKPNAGNGADLPNYRWTQSLSE 182
Query: 142 LNVNVP--VPNGTKSGFVICEIKKNHLKVGLKGQPPIIDGELYKFIKADECYWSIEDQST 199
+++ VP V K V+ ++++ LKVGLKG PP+IDG+L+ +K +E W IED
Sbjct: 183 VDLVVPFDVSFRLKGKDVVVDVQRRTLKVGLKGHPPLIDGQLFNEVKVEESSWLIEDGKV 242
Query: 200 VSILLTKHDQMDWWKCLVKGDPLINTQKVEPESSKLGELDSETRMTVEKMMFDQRQKSMG 259
V+I K ++M+WW LV DP INT+K+ PE+SKL +LD ETR VEKMM+DQRQKSMG
Sbjct: 243 VTIHFEKINKMEWWNKLVTTDPEINTKKICPENSKLSDLDGETRSMVEKMMYDQRQKSMG 302
Query: 260 LPTSEELEKQEMMKKFMSQHPNMDFSGAKLS 290
LPTSEE +KQ+++KKFM+QHP MDFS AK S
Sbjct: 303 LPTSEEQKKQDILKKFMAQHPEMDFSKAKFS 333
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.310 0.127 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,212,080
Number of Sequences: 2540612
Number of extensions: 20077124
Number of successful extensions: 61657
Number of sequences better than 10.0: 263
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 61016
Number of HSP's gapped (non-prelim): 496
length of query: 290
length of database: 863,360,394
effective HSP length: 127
effective length of query: 163
effective length of database: 540,702,670
effective search space: 88134535210
effective search space used: 88134535210
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 74 (33.1 bits)
Medicago: description of AC134822.4