BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134322.6 + phase: 0
(1667 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO73521.1| gag-pol polyprotein [Glycine max] 1054 0.0
gb|AAO73523.1| gag-pol polyprotein [Glycine max] 1053 0.0
gb|AAO73527.1| gag-pol polyprotein [Glycine max] 1050 0.0
gb|AAO73529.1| gag-pol polyprotein [Glycine max] 1042 0.0
gb|AAC64917.1| gag-pol polyprotein [Glycine max] 1033 0.0
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana] 1030 0.0
gb|AAO73525.1| gag-pol polyprotein [Glycine max] 1028 0.0
gb|AAD20307.1| copia-type pol polyprotein [Zea mays] 995 0.0
gb|AAN40030.1| putative gag-pol polyprotein [Zea mays] 991 0.0
gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 985 0.0
gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein... 972 0.0
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays] 962 0.0
ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (jap... 958 0.0
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 956 0.0
ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultiva... 956 0.0
ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica... 953 0.0
gb|AAL35396.1| Opie2a pol [Zea mays] 951 0.0
emb|CAE04884.2| OSJNBa0042I15.6 [Oryza sativa (japonica cultivar... 917 0.0
gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cult... 914 0.0
ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica... 900 0.0
>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
Length = 1574
Score = 1054 bits (2725), Expect = 0.0
Identities = 628/1666 (37%), Positives = 923/1666 (54%), Gaps = 154/1666 (9%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG D T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK + L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKISRLQLLATKFEN 136
Query: 152 FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+M+++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ KKSK++A S E EE+ D ++
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-AEKKSKNLAFVSN------------DEGEEDEYDLNT 243
Query: 272 DEDQSVKMAMLSNKLEYLARKQKK----------FLSKRGSYKNSKKEDQKG-------C 314
DE + + +L + + + K F ++GS K KK D K C
Sbjct: 244 DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS-KYQKKSDVKPSHSKGIQC 302
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH IA+CP K+ KG S S D +SE SD
Sbjct: 303 HGCEGYGHIIAECPTHLKKHRKGLSVCQS-------------------DTESEQESD--- 340
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A G+ T +ED ++ S+I EL S ++L E +
Sbjct: 341 SDRDVNALTGIFET------------AEDSSDTDSEITFDELATSYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGN 493
LK+ DL ++++ E+ ELKG +++ E+ KS+ + +KGS
Sbjct: 389 AQLKKVIADLEAEKEAHKEEIS----ELKGEVGFLNSKLENMTKSI-----KMLNKGSDT 439
Query: 494 KHEIALDDFIMAGIDRSKVASMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLK 551
LD+ ++ G KN G +G+G++ + + ++ + K+
Sbjct: 440 -----LDEVLLLG--------------KNAGNQRGLGFNPKSAGRTTMTEFVPA-KNRTG 479
Query: 552 STFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVM-------TKSDPKSQKIKILK 604
+T + Q K + + K ++K T+S +K+ +
Sbjct: 480 ATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHPHHGTQSSNSRKKMMWVP 539
Query: 605 RSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHP------- 657
+ + V ++ + ++D + + T GVK +LN + + +
Sbjct: 540 KHKAVSL-VVHTSLRASAKEDWYLDSGCSRHMT---GVKEFLLNIEPCSTSYVTFGDGSK 595
Query: 658 -KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSI 716
K+ G + + S+N V LV GL NL+SISQ CD G++V F+K+ C + N+ + +
Sbjct: 596 GKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVL 655
Query: 717 TFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGL 776
+ +N Y + + CL S D+ +WH+R GH + R + KI V+G+
Sbjct: 656 MKGSRSKDNCYLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGI 714
Query: 777 PNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLV 836
PN+ +CG CQ GK VK S + +TSR LELLH+DL GP+ SL G +Y V
Sbjct: 715 PNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYV 774
Query: 837 IVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCE 896
+VDD+SR+TWVKFI+ K EVF ++Q EK+ I ++RSDHG EFEN FC
Sbjct: 775 VVDDFSRFTWVKFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEFCT 834
Query: 897 KHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIY 956
GI HEFS+ TPQQNG+VERKNRTLQE AR M+H L + WAEA+NT+CYI NR+
Sbjct: 835 SEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVT 894
Query: 957 IRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKA 1016
+R T YE++KGR+P++ +FH G YIL ++ +K++ K+ GIF GYS S+A
Sbjct: 895 LRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRA 954
Query: 1017 YRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVE 1076
YRV+NS T+ V ES++V DD P K + + + DA
Sbjct: 955 YRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADA---------------- 998
Query: 1077 SCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKD 1136
A+S AE S +ES + IQ HP+ELIIG +
Sbjct: 999 ----------AKSGENAENSDSATDESNINQPDKRSSTRIQ------KMHPKELIIGDPN 1042
Query: 1137 SPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPS 1196
TRS + S +S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P
Sbjct: 1043 RGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPE 1102
Query: 1197 QKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSY 1256
N+IGTKW+F+NK NE+G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL
Sbjct: 1103 GTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLGV 1162
Query: 1257 AINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAW 1316
A LYQMDVKSAFLNG + EEVYV+QP GF D HPDHVY+LKK+LYGLKQAPRAW
Sbjct: 1163 ACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAW 1222
Query: 1317 YDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQD 1376
Y+RL+ FL + + +G +D TLF + ++++I QIYVDDI+FG + + + F + MQ
Sbjct: 1223 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQS 1282
Query: 1377 EFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSK 1436
EFEMS++GEL +FLG+Q+ Q ++ +++ Q++Y K ++KKF +E+ TP LSK
Sbjct: 1283 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSK 1342
Query: 1437 EDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKG 1496
++ GT VDQ LYR MIGSLLYLTASRPDI ++V +CAR+Q++P+ SHLT VKRI +Y+ G
Sbjct: 1343 DEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNG 1402
Query: 1497 TTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMST 1556
T++ G++Y + L+G+CDAD+AG +RKSTSG C +LG NLISW SK+Q +++ST
Sbjct: 1403 TSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLST 1462
Query: 1557 AEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIK 1616
AEAEYI+A S C+QL+WMK L++Y + + + +YCDN +AI +SKNP+ HSR KHI+I+
Sbjct: 1463 AEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIR 1522
Query: 1617 HHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
HH+IR+ V ++ ++ +DTE Q ADIFTK L +FE ++ L +
Sbjct: 1523 HHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGI 1568
>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 1053 bits (2722), Expect = 0.0
Identities = 627/1668 (37%), Positives = 922/1668 (54%), Gaps = 156/1668 (9%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG D T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK L + EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDACEILKSTHEGTSKVKMSRLQLLATKFEN 136
Query: 152 FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+M+++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ KKSK++A S E EE+ D D+
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-AEKKSKNLAFVSN------------DEGEEDEYDLDT 243
Query: 272 DEDQSVKMAMLSNKLEYLARKQKK----------FLSKRGSYKNSKKEDQKG-------C 314
DE + + +L + + + K F ++GS K K+ D K C
Sbjct: 244 DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS-KYQKRSDVKPSHSKGIQC 302
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH IA+CP K+ KG S S D +SE SD
Sbjct: 303 HGCEGYGHIIAECPTHLKKHRKGLSVCQS-------------------DTESEQESD--- 340
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A +G+ T +ED ++ S+I EL S ++L E +
Sbjct: 341 SDRDVNALIGIFET------------AEDSSDTDSEITFDELAASYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGN 493
LK+ DL ++++ E+ ELKG +++ E+ KS+ + +KGS
Sbjct: 389 AQLKKVIADLEAEKEAHKEEIS----ELKGEVGFLNSKLENMTKSI-----KMLNKGSDT 439
Query: 494 KHEIALDDFIMAGIDRSKVASMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLK 551
LD+ ++ G KN G +G+G++ + + ++ + K+
Sbjct: 440 -----LDEVLLLG--------------KNAGNQRGLGFNPKSAGRTTMTEFVPA-KNRTG 479
Query: 552 STFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVM---------TKSDPKSQKIKI 602
+T + Q K + + K ++K T+S +K+
Sbjct: 480 ATMSQHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRKKMMW 539
Query: 603 LKRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHP----- 657
+ + + V ++ + ++D + + T GVK +LN + + +
Sbjct: 540 VPKHKAVSL-VVHTSLRASAKEDWYLDSGCSRHMT---GVKEFLLNIEPCSTSYVTFGDG 595
Query: 658 ---KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDK 714
K+ G + + S+N V LV GL NL+SISQ CD G++V F+K+ C + N+ +
Sbjct: 596 SKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 655
Query: 715 SITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVK 774
+ + +N Y + + CL S D+ +WH+R GH + R + KI V+
Sbjct: 656 VLMKGSRSKDNCYLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVR 714
Query: 775 GLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYG 834
G+PN+ +CG CQ GK VK S + +TSR LELLH+DL GP+ SL G +Y
Sbjct: 715 GIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYA 774
Query: 835 LVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELF 894
V+VDD+SR+TWV FI+ K EVF ++Q EK+ I ++RSDHG EFEN F F
Sbjct: 775 YVVVDDFSRFTWVNFIREKSGTFEVFKKLSLRLQREKDCVIKRIRSDHGREFENSRFTEF 834
Query: 895 CEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNR 954
C GI HEFS+ TPQQNG+VERKNRTLQE AR M+H L + WAEA+NT+CYI NR
Sbjct: 835 CTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNR 894
Query: 955 IYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERS 1014
+ +R T YE++KGR+P++ +FH G YIL ++ +K++ K+ GIF GYS S
Sbjct: 895 VTLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNS 954
Query: 1015 KAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTE 1074
+AYRV+NS T+ V ES++V DD P K + + + DA
Sbjct: 955 RAYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTSGDNVADA-------------- 1000
Query: 1075 VESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGS 1134
A+S AE S +ES + IQ HP+ELIIG
Sbjct: 1001 ------------AKSGENAENSDSATDESNINQPDKRSSTRIQ------KMHPKELIIGD 1042
Query: 1135 KDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPK 1194
+ TRS + S +S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+
Sbjct: 1043 PNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPR 1102
Query: 1195 PSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLL 1254
P N+IGTKW+F+NK NE+G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL
Sbjct: 1103 PEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLL 1162
Query: 1255 SYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPR 1314
A LYQMDVKSAFLNG + EEVYV+QP GF D HPDHVY+LKK+LYGLKQAPR
Sbjct: 1163 GVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPR 1222
Query: 1315 AWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLM 1374
AWY+RL+ FL + + +G +D TLF + ++++I QIYVDDI+FG + + + F + M
Sbjct: 1223 AWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQM 1282
Query: 1375 QDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTL 1434
Q EFEMS++GEL +FLG+Q+ Q ++ +++ Q++Y K ++KKF +E+ TP L
Sbjct: 1283 QSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKL 1342
Query: 1435 SKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYL 1494
SK++ GT VDQK YR MIGSLLYLTASRPDI ++V +CAR+Q++P+ SHL VKRI +Y+
Sbjct: 1343 SKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYV 1402
Query: 1495 KGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAM 1554
GT++ G++Y L+G+CDAD+AG +RKSTSG C +LG NLISW SK+Q +++
Sbjct: 1403 NGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSL 1462
Query: 1555 STAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIE 1614
STAEAEYI+A S C+QL+WMK L++Y + + + +YCDN +AI +SKNP+ HSR KHI+
Sbjct: 1463 STAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHID 1522
Query: 1615 IKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
I+HH+IR+ V ++ ++ +DTE Q ADIFTK L +FE ++ L +
Sbjct: 1523 IRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGI 1570
>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 1050 bits (2714), Expect = 0.0
Identities = 625/1667 (37%), Positives = 917/1667 (54%), Gaps = 154/1667 (9%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG D T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK + L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSRLQLLATKFEN 136
Query: 152 FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+M+++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ KKSK++A S E EE+ D D+
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-AEKKSKNLAFVSN------------DEGEEDEYDLDT 243
Query: 272 DEDQSVKMAMLSNKLEYLARKQKK----------FLSKRGSYKNSKKEDQKG-------C 314
DE + + +L + + + K F ++GS K K+ D K C
Sbjct: 244 DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGS-KYQKRSDVKPSHSKGIQC 302
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH IA+CP K+ KG S S D +SE SD
Sbjct: 303 HGCEGYGHIIAECPTHLKKHRKGLSVCQS-------------------DTESEQESD--- 340
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A G+ T +ED ++ S+I EL S ++L E +
Sbjct: 341 SDRDVNALTGIFET------------AEDSSDTDSEITFDELAASYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNK 494
LK+ DL ++++ E+ + E+ N T + +K L NK
Sbjct: 389 AQLKKVIADLEAEKEAHEEEISELKGEVGFLNSKLETMKKSIKML-------------NK 435
Query: 495 HEIALDDFIMAGIDRSKVASMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLKS 552
LD+ ++ G KN G +G+G++ + + ++ + K+ +
Sbjct: 436 GSDTLDEVLLLG--------------KNAGNQRGLGFNPKFAGRTTMTEFVPA-KNRTGT 480
Query: 553 TFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVM---------TKSDPKSQKIKIL 603
T + Q K + + K ++K T+S +K+ +
Sbjct: 481 TMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSNSRKKMMWV 540
Query: 604 KRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHP------ 657
+ + V ++ + ++D + + T GVK +LN + + +
Sbjct: 541 PKHKAVSL-VVHTSLRASAKEDWYLDSGCSRHMT---GVKEFLLNIEPCSTSYVTFGDGS 596
Query: 658 --KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKS 715
K+ G + + S+N V LV GL NL+SISQ CD G++V F+K+ C + N+ +
Sbjct: 597 KGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEV 656
Query: 716 ITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKG 775
+ + +N Y + + CL S D+ +WH+R GH + R + KI V+G
Sbjct: 657 LMKGSRSKDNCYLWTPQETSYSST-CLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRG 715
Query: 776 LPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGL 835
+PN+ +CG CQ GK VK S + +TSR LELLH+DL GP+ SL G +Y
Sbjct: 716 IPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVESLGGKRYAY 775
Query: 836 VIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFC 895
V+VDD+SR+TWV FI+ K EVF ++Q EK+ I ++RSDHG EFEN F FC
Sbjct: 776 VVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRFTEFC 835
Query: 896 EKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRI 955
GI HEFS+ TPQQNG+VERKNRTLQE AR M+H L + WAEA+NT+CYI NR+
Sbjct: 836 TSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRV 895
Query: 956 YIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSK 1015
+R T YE++KGR+P++ +FH G YIL ++ +K++ K+ GIF GYS S+
Sbjct: 896 TLRRGTPTTLYEIWKGRKPSVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSR 955
Query: 1016 AYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEV 1075
AYRV+NS T+ V ES++V DD P K + + + DA
Sbjct: 956 AYRVFNSRTRTVMESINVVVDDLSPARKKDVEEDVRTLGDNVADA--------------- 1000
Query: 1076 ESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSK 1135
A+S AE S +ES + IQ HP+ELIIG
Sbjct: 1001 -----------AKSGENAENSDSATDESNINQPDKRSSTRIQ------KMHPKELIIGDP 1043
Query: 1136 DSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKP 1195
+ TRS + S +S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P
Sbjct: 1044 NRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRP 1103
Query: 1196 SQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLS 1255
N+IGTKW+F+NK NE+G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL
Sbjct: 1104 EGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLLG 1163
Query: 1256 YAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRA 1315
A LYQMDVKSAFLNG + EEVYV+QP GF D HPDHVY+LKK+LYGLKQAPRA
Sbjct: 1164 VACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRA 1223
Query: 1316 WYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQ 1375
WY+RL+ FL + + +G +D TLF + ++++I QIYVDDI+FG + + + F + MQ
Sbjct: 1224 WYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQ 1283
Query: 1376 DEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLS 1435
EFEMS++GEL +FLG+Q+ Q ++ +++ Q++Y K ++KKF +E+ TP LS
Sbjct: 1284 SEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLS 1343
Query: 1436 KEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLK 1495
K++ GT VDQ LYR MIGSLLYLTASRPDI ++V +CAR+Q++P+ SHLT VKRI +Y+
Sbjct: 1344 KDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVN 1403
Query: 1496 GTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMS 1555
GT++ G++Y + L+G+CDAD+AG +RKSTSG C +LG NLISW SK+Q +++S
Sbjct: 1404 GTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLS 1463
Query: 1556 TAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEI 1615
TAEAEYI+A S C+QL+WMK L++Y + + + +YCDN +AI +SKNP+ HSR KHI+I
Sbjct: 1464 TAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDI 1523
Query: 1616 KHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
+HH+IR+ V ++ ++ +DTE Q ADIFTK L +FE ++ L +
Sbjct: 1524 RHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKLGI 1570
>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
Length = 1577
Score = 1042 bits (2695), Expect = 0.0
Identities = 628/1673 (37%), Positives = 923/1673 (54%), Gaps = 165/1673 (9%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG + T + +L
Sbjct: 17 DGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
+ K + + + + ++ + AK + L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFEN 136
Query: 152 FRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDL 211
+M+++E I + + + + L + V KILRSLP R+ KVTAIEEA+D+
Sbjct: 137 LKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDS 271
+ V++L+ SL+ E+ L++ T KKSK++A S E EE+ D D+
Sbjct: 197 CNMRVDELIGSLQTFELGLSDR-TEKKSKNLAFVSN------------DEGEEDEYDLDT 243
Query: 272 DEDQSVKMAMLSNK----LEYLARKQKKFLS------KRGSYKNSKKEDQ----KG--CF 315
DE + + L + L + R+QK + ++GS K +++ KG C
Sbjct: 244 DEGLTNAVVFLGKQFNKVLNRMDRRQKPHVRNISLDIRKGSEYQRKSDEKPSHSKGIQCR 303
Query: 316 NCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEA 375
C+ GH A+CP K++ KG S S +D +SE SD +
Sbjct: 304 GCEGYGHIKAECPTHLKKQRKGLSVCRS------------------DDTESEQESD---S 342
Query: 376 DDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELT 435
D D A G + +ED ++ S+I EL +EL E +
Sbjct: 343 DRDVNALTGRFES------------AEDSSDTDSEITFDELAIFYRELCIKSEKILQQEA 390
Query: 436 DLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNKH 495
LK+ +L ++++ E+ + E+ GF +++ E+ KS+ + +KGS
Sbjct: 391 QLKKVIANLEAEKEAHEEEISKLKGEV-GF--LNSKLENMTKSI-----KMLNKGSD--- 439
Query: 496 EIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFV 555
LD+ + G KV + +G+G++ + + ++ + FV
Sbjct: 440 --MLDZVLQLG---KKVGNQ---------RGLGFNHKSAGRTTM------------TEFV 473
Query: 556 P-EGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVH---- 610
P + + T Q + G+Q K SK + + K L P H
Sbjct: 474 PAKNSTGATMSQHRSRHHGTQQK-RSKRKKWRCHYCGKYGHIKPFCYHL-HGHPHHGTQG 531
Query: 611 -----QNLIKPESKIPKQKDQKNKAATASEKTI--------PKGVKPKVLNDQKPLSIHP 657
+ + P+ KI + A+A E GVK ++N + + +
Sbjct: 532 SSSGRKMMWVPKHKIVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLVNIEPCSTSYV 591
Query: 658 --------KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLV 709
K+ G + S+N V LV GL NL+SISQ CD G++V F+K+ C +
Sbjct: 592 TFGDGSKGKITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVT 651
Query: 710 NKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISK 769
N+ + + + +N Y + + CL S D+ +WH+R GH + R + KI
Sbjct: 652 NEKSEVLMKGSRSKDNCYLWTPQE-SSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIID 710
Query: 770 LQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLY 829
V+G+PN+ +CG CQ GK VK S + +TSR LELLH+DL GP+ SL
Sbjct: 711 KGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLG 770
Query: 830 GSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENE 889
G +Y V+VDD+SR+TWV FI+ K EVF ++Q EK+ I ++RSDHG EFEN
Sbjct: 771 GKRYAYVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENS 830
Query: 890 PFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSC 949
F FC GI HEFS+ TPQQNG+VERKNRTLQE AR M+H L + WAEA+NT+C
Sbjct: 831 KFTEFCTSEGITHEFSAAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTAC 890
Query: 950 YIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXG 1009
YI NR+ +R T YE++KGR+P + +FH G YIL ++ +K++ K+ GIF G
Sbjct: 891 YIHNRVTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLG 950
Query: 1010 YSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDS 1069
YS S+AYRV+NS T+ V ES++V DD P K + + + D +D+
Sbjct: 951 YSTNSRAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVR---------TSGDNVADT 1001
Query: 1070 EKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEE 1129
K E AE++ A P + +P + + HP+E
Sbjct: 1002 AKSAE-----------NAENSDSATDEPNINQPDK------------RPSIRIQKMHPKE 1038
Query: 1130 LIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVW 1189
LIIG + TRS + S +S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW
Sbjct: 1039 LIIGDPNRGVTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVW 1098
Query: 1190 DLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEA 1249
+LVP+P N+IGTKW+F+NK NE+G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE+
Sbjct: 1099 ELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLES 1158
Query: 1250 IRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGL 1309
IRLLL A LYQMDVKSAFLNG + EE YV+QP GF D HPDHVY+LKK+LYGL
Sbjct: 1159 IRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGL 1218
Query: 1310 KQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKE 1369
KQAPRAWY+RL+ FL + + +G +D TLF + ++++I QIYVDDI+FG + + +
Sbjct: 1219 KQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRH 1278
Query: 1370 FSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMH 1429
F + MQ EFEMS++GEL +FLG+Q+ Q ++ +++ Q+KY K ++KKF +E+ TP
Sbjct: 1279 FVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAP 1338
Query: 1430 PTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKR 1489
LSK++ GT VDQ LYR MIGSLLYLTASRPDI ++V +CAR+Q++P+ SHL VKR
Sbjct: 1339 THLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKR 1398
Query: 1490 IFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQ 1549
I +Y+ GT++ G++Y L+G+CDAD+AG +RKSTSG C +LG NLISW SK+Q
Sbjct: 1399 ILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQ 1458
Query: 1550 ATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSR 1609
+++STAEAEYI+A S C+QL+WMK L++Y + + + +YCDN +AI +SKNP+ HSR
Sbjct: 1459 NCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSR 1518
Query: 1610 AKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
KHI+I+HH+IR V ++ ++ +DTE Q ADIFTK L ++FE ++ L +
Sbjct: 1519 TKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKLGI 1571
>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
Length = 1550
Score = 1033 bits (2670), Expect = 0.0
Identities = 620/1662 (37%), Positives = 919/1662 (54%), Gaps = 155/1662 (9%)
Query: 48 MYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKLYKKHHKIRGII 102
M +F+ LD W + G + LD EG + T + +L + K +
Sbjct: 1 MVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDELALGNSKALNAL 60
Query: 103 VASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEE 162
+ + + ++ + AK + L EG+ KVK ++ +L ++E +M+++E I E
Sbjct: 61 FNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKVKMSRLQLLATKFENLKMKEEECIHE 120
Query: 163 MYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSS 222
+ + + L + V KILRSLP R+ KVTAIEEA+D+ + V++L+ S
Sbjct: 121 FHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQDICNMRVDELIGS 180
Query: 223 LKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMAML 282
L+ E+ L++ T KKSK++A S E EE+ D D+DE + + +L
Sbjct: 181 LQTFELGLSDR-TEKKSKNLAFVSN------------DEGEEDEYDLDTDEGLTNAVVLL 227
Query: 283 SNK----LEYLARKQKK------FLSKRGSYKNSKKEDQKG-------CFNCKKPGHFIA 325
+ L + R+QK F ++GS + K+ D+K C C+ GH A
Sbjct: 228 GKQFNKVLNRMDRRQKPHVRNIPFDIRKGS-EYQKRSDEKPSHSKGIQCHGCEGYGHIKA 286
Query: 326 DCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGL 385
+CP K++ KG S S +D +SE SD +D D A G
Sbjct: 287 ECPTHLKKQRKGLSVCRS------------------DDTESEQESD---SDRDVNALTGR 325
Query: 386 VATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLM 445
+ +ED ++ S+I EL S +EL E + LK+ +L
Sbjct: 326 FES------------AEDSSDTDSEITFDELAISYRELCIKSEKILQQEAQLKKVIANLE 373
Query: 446 KQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIM 504
++++ E+ ELKG +++ E+ KS+ + +KGS LD+ +
Sbjct: 374 AEKEAHEDEIS----ELKGEIGFLNSKLENMTKSI-----KMLNKGSD-----LLDEVLQ 419
Query: 505 AGIDRSKVASMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAI 562
G KN G +G+G++ + + ++ + K+ +T +
Sbjct: 420 LG--------------KNVGNQRGLGFNHKSAGRTTMTEFVPA-KNSTGATMSQHRSRHH 464
Query: 563 TAVQSKPEASGSQAKITSKPENLKIKVM---------TKSDPKSQKIKILKRSEPVHQNL 613
Q K + + K ++K T+S +K+ + + + V +
Sbjct: 465 GTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSSSGRKMMWVPKHKTVSL-V 523
Query: 614 IKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHP--------KVQGRKST 665
+ + ++D + + T GVK ++N + + + K+ G
Sbjct: 524 VHTSLRASAKEDWYLDSGCSRHMT---GVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKL 580
Query: 666 IGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVEN 725
+ + S+N V LV GL NL+SISQ CD G++V F+K+ C + N+ + + + +N
Sbjct: 581 VHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDN 640
Query: 726 VYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDA 785
Y + + CL S D+ +WH+R GH + R + KI V+G+PN+
Sbjct: 641 CYLWTPQETSYSST-CLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGR 699
Query: 786 LCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWT 845
+CG CQ GK VK S + +TSR LELLH+DL GP+ SL +Y V+VDD+SR+T
Sbjct: 700 ICGECQIGKQVKMSNQKLQHQTTSRVLELLHMDLMGPMQVESLGRKRYAYVVVDDFSRFT 759
Query: 846 WVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFS 905
WV FI+ K EVF ++Q EK+ I ++RSDHG EFEN F FC GI HEFS
Sbjct: 760 WVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEFCTSEGITHEFS 819
Query: 906 SPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTA 965
+ TPQQNG+VERKNRTLQE AR M+H L + WAEA+NT+CYI NR+ +R T
Sbjct: 820 AAITPQQNGIVERKNRTLQEAARVMLHAKELPYNLWAEAMNTACYIHNRVTLRRGTPTTL 879
Query: 966 YELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQ 1025
YE++KGR+P + +FH G YIL ++ +K++ K+ GIF GYS S+AYRV+NS T+
Sbjct: 880 YEIWKGRKPTVKHFHICGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTR 939
Query: 1026 CVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITP 1085
V ES++V DD P K + + + D +D+ K E
Sbjct: 940 TVMESINVVVDDLTPARKKDVEEDVR---------TSGDNVADTAKSAE----------- 979
Query: 1086 EAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHF 1145
AE++ A P + +P + + HP+ELIIG + TRS
Sbjct: 980 NAENSDSATDEPNINQPDK------------RPSIRIQKMHPKELIIGDPNRGVTTRSRE 1027
Query: 1146 RQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKW 1205
+ S +S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+P N+IGTKW
Sbjct: 1028 IEIISNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPRPEGTNVIGTKW 1087
Query: 1206 VFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILY 1265
+F+NK NE+G +TRNKARLVAQGY+Q EG+D+ ETFAP ARLE+IRLLL A LY
Sbjct: 1088 IFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPGARLESIRLLLGVACILKFKLY 1147
Query: 1266 QMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLI 1325
QMDVKSAFLNG + EE YV+QP GF D HPDHVY+LKK+LYGLKQAPRAWY+RL+ FL
Sbjct: 1148 QMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAWYERLTEFLT 1207
Query: 1326 KNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGE 1385
+ + +G +D TLF + ++++I QIYVDDI+FG + + + F + MQ EFEMS++GE
Sbjct: 1208 QQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGE 1267
Query: 1386 LKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQ 1445
L +FLG+Q+ Q ++ +++ Q+KY K ++KKF +E+ TP LSK++ GT VDQ
Sbjct: 1268 LTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQ 1327
Query: 1446 KLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1505
LYR MIGSLLYLTASRPDI ++V CAR+Q++P+ SHL VKRI +Y+ GT++ G++Y
Sbjct: 1328 SLYRSMIGSLLYLTASRPDITYAVGGCARYQANPKISHLNQVKRILKYVNGTSDYGIMYC 1387
Query: 1506 KSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAA 1565
D L+G+CDAD+AG +RKST G C +LG N ISW SK+Q +++STAEAEYI+A
Sbjct: 1388 HCSDSMLVGYCDADWAGSVDDRKSTFGGCFYLGTNFISWFSKKQNCVSLSTAEAEYIAAG 1447
Query: 1566 SCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQ 1625
S C+QL+WMK L++Y + + + +YCDN +AI +SKNP+ HSR KHI+I+HH+IR+ V
Sbjct: 1448 SSCSQLVWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPVQHSRTKHIDIRHHYIRDLVD 1507
Query: 1626 KGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNMHFVSD 1667
++ ++ +DTE Q ADIFTK L +FE ++ L + + D
Sbjct: 1508 DKVITLEHVDTEEQIADIFTKALDANQFEKLRGKLGICLLED 1549
>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
Length = 1643
Score = 1030 bits (2664), Expect = 0.0
Identities = 613/1665 (36%), Positives = 918/1665 (54%), Gaps = 88/1665 (5%)
Query: 41 FSWWKTNMYSFIMGLDEELWDIL-----------EDGVDDLDLDEEGAAIDRRIHTPAQK 89
+ WK M + I GL +E W E+G D L +++ T A++
Sbjct: 21 YGHWKVKMRALIRGLGKEAWIATSVGWKAPVVKGENGEDVLKTEDQW--------TDAEE 72
Query: 90 KLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQY 149
+ + +I S+ + ++ ++ + +AK + L +EG+ VK ++ ML Q+
Sbjct: 73 AKATANSRALSLIFNSVNQNQFKRIQNCESAKEAWDKLAKAYEGTSSVKRSRIDMLASQF 132
Query: 150 ELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAK 209
E M++ E+IEE + + S L K Y V K+LR LPSR+ K TA+ +
Sbjct: 133 ENLTMDESENIEEFSGKISAIASEAHNLGKKYKDKKLVKKLLRCLPSRFESKRTAMGTSL 192
Query: 210 DLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEE--ESP 267
D +T+ E++V L+ +E+ + KG SK +SE E E
Sbjct: 193 DTDTIDFEEVVGMLQAYELEITS-------------GKGGYSKGVALAVSSEKNEIQELK 239
Query: 268 DGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADC 327
D S ++ AM + AR Q + + K + C C+ GH A+C
Sbjct: 240 DSMSMMAKNFSRAMKRVEKRGFARNQGSDRDRDRDRDRNSKRSEIQCHECQGYGHIKAEC 299
Query: 328 PDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAVGLVA 387
P L+++ K S+ +KF KS +S+S SD E++++D K V V
Sbjct: 300 PSLKRKDLKC-SECRGIGHTKFDCIGSKSKPDRSYIAESDSDSDDEDSEEDVKGFVSFVG 358
Query: 388 TVSSEAVSEAESDSE---DENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDL 444
+ + VS SDSE ++ E+ + +D E L+E N L KEK + L
Sbjct: 359 IIEDDNVSSDSSDSEVGCEKEEISADDESDVEMDVDGEFRKLYE---NWLVLSKEKVIWL 415
Query: 445 MKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIM 504
+++ +++ + EL N I + + + +K +E S + +I + +
Sbjct: 416 -EEKVKVQEQIEQLKGELAVANQIKSEMILKYSAKEEKNRELSQDLSDTRKKIHMLNKGT 474
Query: 505 AGIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGL---KSTFVPEGTNA 561
+D A + + G G S K+ K+ + KS VP
Sbjct: 475 KDLDSILAAGRVGKSNFGLGYHGGGSSTKTNFVRSKAAAPTQSQSVFRSKSNSVPARRKY 534
Query: 562 ITA--VQSKPEASGSQAKITSKPENL------------KIKVMTKSDP-KSQKIKILKRS 606
S+ +G + + ++ K+K K P + + K+ R
Sbjct: 535 QNQNHYHSQRTVTGYECYYCGRHGHIQRYCYRYAARLSKLKRQGKLYPHQGRNSKMYVRR 594
Query: 607 EPVHQNL----IKPESKIPKQKDQ-KNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVQG 661
E ++ ++ I K P D ++ T S+ + K N +++G
Sbjct: 595 EDLYCHVAYTSIAEGVKKPWYFDSGASRHMTGSQANLNNYSSVKESNVMFGGGAKGRIKG 654
Query: 662 RKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGK 721
+ + NV+ V+GL NL+S+SQ CD G V+F+K C N+ +++ +
Sbjct: 655 KGDLTETEKPHLTNVYFVEGLTANLISVSQLCDEGLTVSFNKVKCWATNERNQNTLTGVR 714
Query: 722 RVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDY 781
N Y + ++ +CL + + +WH+RLGH N R +SK+ ++V+G+P + +
Sbjct: 715 TGNNCY------MWEEPKICLRAEKEDPVLWHQRLGHMNARSMSKLVNKEMVRGVPELKH 768
Query: 782 HSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDY 841
+CGAC +GK ++ K + + T++ L+L+H+DL GP+ T S+ G +Y V+VDD+
Sbjct: 769 IEKIVCGACNQGKQIRVQHKRVEGIQTTQVLDLIHMDLMGPMQTESIAGKRYVFVLVDDF 828
Query: 842 SRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGIL 901
SR+ WV+FI+ K F Q++ EK++ I ++RSD GGEF NE F FCE GI
Sbjct: 829 SRYAWVRFIREKSETANSFKILALQLKNEKKMGIKQIRSDRGGEFMNEAFNSFCESQGIF 888
Query: 902 HEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMX 961
H++S+PRTPQ NGVVERKNRTLQEMAR MIH N + + FWAEA++T+CY+ NR+Y+R
Sbjct: 889 HQYSAPRTPQSNGVVERKNRTLQEMARAMIHGNGVPEKFWAEAISTACYVINRVYVRLGS 948
Query: 962 EXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYN 1021
+ T YE++KG++PN+S F GC YI+N KD L K +++++ G F GY+ S AYRV+N
Sbjct: 949 DKTPYEIWKGKKPNLSYFRVFGCVCYIMNDKDQLGKFDSRSEEGFFLGYATNSLAYRVWN 1008
Query: 1022 SETQCVEESMHVKFDDRE-PGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPE 1080
+ +EESM+V FDD P + ++ + T+ S + E + +
Sbjct: 1009 KQRGKIEESMNVVFDDGSMPELQIIVRNRNEPQTSISNNHGEERNDNQFDN--------- 1059
Query: 1081 AEITPEAESNSEAEPSPKVQNESASEDF-QDNTQQVIQPKFKHKSSHPEELIIGSKDSPR 1139
+I E + E P +V + AS+D D + + + K + G K R
Sbjct: 1060 GDINKSGEESDEEVPPAQVHRDHASKDIIGDPSGERVTRGVKQDYRQ----LAGIKQKHR 1115
Query: 1140 RTRSHFRQEESLIG-LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQK 1198
S EE + +SI+EPK V+EAL D WILAM+EEL +F R+ VWDLVP+P Q
Sbjct: 1116 VMASFACFEEIMFSCFVSIVEPKNVKEALEDHFWILAMEEELEEFSRHQVWDLVPRPPQV 1175
Query: 1199 NIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAI 1258
N+IGTKW+F+NK +E G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE IR LL A
Sbjct: 1176 NVIGTKWIFKNKFDEVGNITRNKARLVAQGYTQVEGLDFDETFAPVARLECIRFLLGTAC 1235
Query: 1259 NHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYD 1318
G L+QMDVK AFLNG++EEEVYV+QP GFE+L+ P++VYKLKK+LYGLKQAPRAWY+
Sbjct: 1236 GMGFKLHQMDVKCAFLNGIIEEEVYVEQPKGFENLEFPEYVYKLKKALYGLKQAPRAWYE 1295
Query: 1319 RLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEF 1378
RL+ FLI + RG VD TLF + I+I+QIYVDDI+FG T+ L K F K M EF
Sbjct: 1296 RLTTFLIVQGYTRGSVDKTLFVKNDVHGIIIIQIYVDDIVFGGTSDKLVKTFVKTMTTEF 1355
Query: 1379 EMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKED 1438
MSM+GELK+FLG+QINQ+ EG+ + Q+ Y + L+K+F + K TPM T L K++
Sbjct: 1356 RMSMVGELKYFLGLQINQTDEGITISQSTYAQNLVKRFGMCSSKPAPTPMSTTTKLFKDE 1415
Query: 1439 TGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTT 1498
G VD+KLYRGMIGSLLYLTA+RPD+ SV LCAR+QS+P+ SHL AVKRI +Y+ GT
Sbjct: 1416 KGVKVDEKLYRGMIGSLLYLTATRPDLCLSVGLCARYQSNPKASHLLAVKRIIKYVSGTI 1475
Query: 1499 NLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAE 1558
N GL Y + L+G+CDAD+ G+ +R+ST+G FLG NLISW SK+Q +++S+ +
Sbjct: 1476 NYGLNYTRDTSLVLVGYCDADWGGNLDDRRSTTGGVFFLGSNLISWHSKKQNCVSLSSTQ 1535
Query: 1559 AEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKH 1617
+EYI+ SCCTQLLWM+ DY + + + + CDN +AI +SKNP+ HS KHI I+H
Sbjct: 1536 SEYIALGSCCTQLLWMRQMGLDYGMTFPDPLLVKCDNESAIAISKNPVQHSVTKHIAIRH 1595
Query: 1618 HFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
HF+R V++ + ++ + TE Q DIFTKPL + F ++K+L +
Sbjct: 1596 HFVRELVEEKQITVEHVPTEIQLVDIFTKPLDLNTFVNLQKSLGI 1640
>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
Length = 1576
Score = 1028 bits (2659), Expect = 0.0
Identities = 622/1673 (37%), Positives = 919/1673 (54%), Gaps = 156/1673 (9%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLD-LDEEGAAIDR----RIHTPAQKKL 91
D + +WK M +F+ LD W + G + LD EG + T + +L
Sbjct: 17 DGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNELKPEEDWTKEEDEL 76
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAK-AMFASLCANFEGSKKVKEAKALMLVHQYE 150
+ K + + + + ++ + AK A L EG+ KVK ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDACGEILKTTHEGTSKVKMSRLQLLATKFE 136
Query: 151 LFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKD 210
+M+++E I + + + + L + V KILRSLP R+ KVTAIEEA+D
Sbjct: 137 NLKMKEEECIHDFHMNILEIANACTALGERMTDEKLVRKILRSLPKRFDMKVTAIEEAQD 196
Query: 211 LNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGD 270
+ + V++L+ SL+ E+ L++ KKSK++A S E EE+ D D
Sbjct: 197 ICNMRVDELIGSLQTFELGLSDRN-EKKSKNLAFVSN------------DEGEEDEYDLD 243
Query: 271 SDEDQSVKMAMLSNK----LEYLARKQKK------FLSKRGSYKNSKKEDQ----KG--C 314
+DE + + +L + L + R+QK F ++GS + K +++ KG C
Sbjct: 244 TDEGLTNAVGLLGKQFNKVLNRMDRRQKPHVRNIPFDIRKGSEYHKKSDEKPSHSKGIQC 303
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEE 374
C+ GH A+CP K++ KG S S +D +SE SD
Sbjct: 304 HGCEGYGHIKAECPTHLKKQRKGLSVCRS------------------DDTESEQESD--- 342
Query: 375 ADDDAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNEL 434
+D D A G E++ DS D +I EL S ++L E +
Sbjct: 343 SDRDVNALTGRF---------ESDEDSSD-----IEITFDELAISYRKLCIKSEKILQQE 388
Query: 435 TDLKEKYVDLMKQQKSTLLELKASEEELKG-FNLISTTYEDRLKSLCQKLQEKCDKGSGN 493
LK+ +L ++++ E+ ELKG +++ E+ KS+ + +KGS
Sbjct: 389 AQLKKVIANLEAEKEAHEEEIS----ELKGEVGFLNSKLENMTKSI-----KMLNKGSD- 438
Query: 494 KHEIALDDFIMAGIDRSKVASMIYSTYKNKG--KGIGYSEEKSKEYSLKSYCDCIKDGLK 551
LD+ + G KN G +G+G++ + + ++ + K+
Sbjct: 439 ----MLDEVLQLG--------------KNVGNQRGLGFNHKSACRITMTEFVPA-KNSTG 479
Query: 552 STFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVM---------TKSDPKSQKIKI 602
+T + Q K + + K ++K T+S +K+
Sbjct: 480 ATMSQHRSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHGTQSSSSGRKMMW 539
Query: 603 LKRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHP----- 657
+ + + V ++ + ++D + + T GVK ++N + + +
Sbjct: 540 VPKHKIVSL-VVHTSLRASAKEDWYLDSGCSRHMT---GVKEFLVNIEPCSTSYVTFGDG 595
Query: 658 ---KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDK 714
K+ G + + S+N V LV GL NL+SISQ CD G++V F+K+ C + N+ +
Sbjct: 596 SKGKITGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSE 655
Query: 715 SITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVK 774
+ + +N Y + + CL S D+ +WH+R GH + R + KI V+
Sbjct: 656 VLMKGSRSKDNCYLWTPQETSYSST-CLSSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVR 714
Query: 775 GLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYG 834
G+PN+ +CG CQ GK VK S + +TS LELLH+DL GP+ SL G +Y
Sbjct: 715 GIPNLKIEEGRICGECQIGKQVKMSHQKLQHQTTSMVLELLHMDLMGPMQVESLGGKRYA 774
Query: 835 LVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELF 894
V+VDD+SR+TWV FI+ K EVF ++Q EK+ I ++RSDHG EFEN F F
Sbjct: 775 YVVVDDFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEF 834
Query: 895 CEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNR 954
C GI HEFS+ TPQQNG+VERKNRTLQE R M+H L + WAEA+NT+CYI NR
Sbjct: 835 CTSEGITHEFSAAITPQQNGIVERKNRTLQEATRVMLHAKELPYNLWAEAMNTACYIHNR 894
Query: 955 IYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERS 1014
+ +R T YE++KGR+P + +FH G YIL ++ +K++ K+ GIF GYS S
Sbjct: 895 VTLRRGTPTTLYEIWKGRKPTVKHFHIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNS 954
Query: 1015 KAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTE 1074
+AYRV+NS T+ V ES++V DD P K + + + D +D+ K E
Sbjct: 955 RAYRVFNSRTRTVMESINVVVDDLTPARKKDVEEDVR---------TSEDNVADTAKSAE 1005
Query: 1075 VESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGS 1134
AE + P + S P + + P+ELIIG
Sbjct: 1006 -----------NAEKSDSTTDEPNINQPDKS------------PFIRIQKMQPKELIIGD 1042
Query: 1135 KDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPK 1194
+ TRS + S +S IEPK V+EAL+D+ WI AMQEEL QF+RN+VW+LVP+
Sbjct: 1043 PNRGVTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNEVWELVPR 1102
Query: 1195 PSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLL 1254
P N+IGTKW+F+NK NE+G +TRNKARLVAQGY+Q EG+D+ ETFAPVARLE+IRLLL
Sbjct: 1103 PEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARLESIRLLL 1162
Query: 1255 SYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPR 1314
A LYQMDVKSAFLNG + EE YV+QP GF D H DHVY+LKK+LYGLKQAPR
Sbjct: 1163 GVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPR 1222
Query: 1315 AWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLM 1374
AWY+RL+ FL + + +G +D TLF + ++++I QIYVDDI+FG + + + F M
Sbjct: 1223 AWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQM 1282
Query: 1375 QDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTL 1434
Q EFEMS++GEL +FLG+Q+ Q ++ +++ Q+KY K ++KKF +E+ TP L
Sbjct: 1283 QSEFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKL 1342
Query: 1435 SKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYL 1494
SK++ GT VDQ LYR MIGSLLYLTASRPDI F+V +CAR+Q++P+ SHL VKRI +Y+
Sbjct: 1343 SKDEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYV 1402
Query: 1495 KGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAM 1554
GT++ G++Y D L+G+CDAD+AG +RK TSG C +LG NLISW SK+Q +++
Sbjct: 1403 NGTSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSL 1462
Query: 1555 STAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIE 1614
STAEAEYI+A S C+QL+WMK L++Y + + + +YCDN +AI +SKNP+ H+R KHI+
Sbjct: 1463 STAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHNRTKHID 1522
Query: 1615 IKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNMHFVSD 1667
I+HH+IR+ V I+ ++ +DTE Q ADIFTK L +FE ++ L + D
Sbjct: 1523 IRHHYIRDLVDDKIITLEHVDTEEQVADIFTKALDANQFEKLRGKLGTCLLED 1575
>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
Length = 1063
Score = 995 bits (2572), Expect = 0.0
Identities = 520/1046 (49%), Positives = 682/1046 (64%), Gaps = 41/1046 (3%)
Query: 650 QKPLSIHPKVQGRKSTIGNSSIS----INNVWLVDGLKHNLLSISQFCDNGYDVTFSKTN 705
Q+ ++ QG +G +IS I+NV+LVD L +NLLS+SQ C GY+ F+
Sbjct: 18 QRAITFGDGNQGLVKGLGKIAISPDHSISNVFLVDSLDYNLLSVSQLCQMGYNCLFTDIG 77
Query: 706 CTLVNKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLIS 765
T+ + D SI F G +Y ++F D A+ CL++ + W+WH+RL H + +
Sbjct: 78 VTVFRRSDDSIAFKGVLEGQLYLVDF-DRAELDT-CLIAKTNMGWLWHRRLAHVGMKNLH 135
Query: 766 KISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNT 825
K+ K + + GL N+ + D +C ACQ GK V + K+I++T RPLELLH+DLFGP+
Sbjct: 136 KLLKGEHILGLTNVHFEKDRICSACQAGKQVGTHHPHKNIMTTDRPLELLHMDLFGPIAY 195
Query: 826 ASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGE 885
S+ GSKY LVIVDDYSR+TWV F++ K E F + Q E L+I K+RSD+G E
Sbjct: 196 ISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTE 255
Query: 886 FENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAV 945
F+N E F E+ GI HEFSSP TPQQNGVVERKNRTL +MARTM+ E FWAEAV
Sbjct: 256 FKNSQIESFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAV 315
Query: 946 NTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRG 1005
NT+CY NR+Y+ + + T+YEL G++PNIS F G +IL + K K G
Sbjct: 316 NTACYAINRLYLHRILKKTSYELLTGKKPNISYFRVFGSKCFILIKRGRKSKFAPKTVEG 375
Query: 1006 IFXGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDS-------- 1057
GY ++AYRV+N T VE S V FD+ GS+ + G +
Sbjct: 376 FLLGYDSNTRAYRVFNKSTGLVEVSCDVVFDETN-GSQVEQVDLDEIGEEQAPCIALRNM 434
Query: 1058 -----------EDASESDQPSDSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASE 1106
E S DQPS S + + E E + E N E EP N+ +
Sbjct: 435 SIGDVCPKESEEPPSTQDQPSSSMQASPPTQ-NEDEAQNDEEQNQEDEPPQDDSNDQGGD 493
Query: 1107 DFQDNTQQVIQPKFKH-------KSSHPEELIIGSKDSPRRTRS---HFRQEESLIGLLS 1156
+ +P+ H + HP + I+G TRS HF + S + S
Sbjct: 494 TNDQEKEDEEEPRPPHPRVHQAIQRDHPVDTILGDIHKGVTTRSRVAHFCEHYSFV---S 550
Query: 1157 IIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGE 1216
IEP VEEAL D W++AMQEELN F RN+VW LVP+P+Q N++GTKWVFRNK +E G
Sbjct: 551 SIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPRPNQ-NVVGTKWVFRNKQDEHGV 609
Query: 1217 VTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNG 1276
VTRNKARLVA+GYSQ EG+D+ ET+APVARLE+IR+LL+YA HG LYQMDVKSAFLNG
Sbjct: 610 VTRNKARLVAKGYSQVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNG 669
Query: 1277 VVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDT 1336
++EEVYV+QPPGFED ++P+HVY+L K+LYGLKQAPRAWY+ L +FLI N F+ G+ D
Sbjct: 670 PIKEEVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADP 729
Query: 1337 TLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQ 1396
TLF +TL+ D+ + QIYVDDIIFGSTN S C+EFS++M +FEMSMMGELK+FLG Q+ Q
Sbjct: 730 TLFTKTLENDLFVCQIYVDDIIFGSTNKSTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQ 789
Query: 1397 SKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLL 1456
+EG ++ QTKYT+++L KF ++D K + TPM L + G VDQK+YR MIGSLL
Sbjct: 790 LQEGTFICQTKYTQDILTKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLL 849
Query: 1457 YLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFC 1516
YL ASRPDI+ SVC+CARFQSDP+ESHLTAVKRI RYL T GL Y + + LIG+
Sbjct: 850 YLCASRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYS 909
Query: 1517 DADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKH 1576
DAD+AG +I RKSTSG CQFLG +L+SWASK+Q ++A+STAEAEYI+A CC QLLWM+
Sbjct: 910 DADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQ 969
Query: 1577 QLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDT 1636
L DY +P+ CDN +AI ++ NP+ HSR KHI I++HF+R++ QKG ++I +I+T
Sbjct: 970 TLLDYGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINT 1029
Query: 1637 EHQWADIFTKPLSVERFEFIKKNLNM 1662
+ Q ADIFTKPL + F ++ LN+
Sbjct: 1030 KDQLADIFTKPLDEQSFTRLRHELNI 1055
>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
Length = 2319
Score = 991 bits (2563), Expect = 0.0
Identities = 635/1715 (37%), Positives = 899/1715 (52%), Gaps = 195/1715 (11%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M S ++G+ LW+I+ G+ EE TP + ++ + II
Sbjct: 138 WADKMKSHLIGVHPSLWEIVNVGMYKPAQGEE--------MTPEMMQEVHRNAQAVSIIK 189
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEM 163
S+ EY K+ + A+ ++ L + EG K K + L + + ES++ +
Sbjct: 190 GSLCPEEYRKVQGREDARDIWNILRMSHEGDPKAKRHRVEALESELARYDWTKGESLQSL 249
Query: 164 YSRFQTLVSGLQILKKSYVASDHVSKI-LRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSS 222
+ R LV+ +++L + V+++ +R+ + + I + D ++ L +
Sbjct: 250 FDRLMVLVNKIRVLGSEDWSDSKVTRLFMRAYKEKDKSLARMIRDRDDYEDMTPHQLFAK 309
Query: 223 LKVHEMSLNEHETSKKSKSIALPSKGKIS-KSSKAYKASESEEESPDGDSDEDQSVKMAM 281
++ HE +E K S AL + + + K SK +KA + E S D DS D+ AM
Sbjct: 310 IQQHE---SEEAPIKTRDSHALITNEQDNLKKSKDHKAKKVVETSSDEDSSSDEDT--AM 364
Query: 282 LSNKLEYLARKQKKFL---SKRGSYK-----------NSKKEDQ---------------- 311
+ RK KF KR Y+ +KKE +
Sbjct: 365 FIKTFKKFVRKNDKFQRKGKKRACYECGQTGHFIADCPNKKEQEAKKEYKKDKFKKGGKT 424
Query: 312 KGCFNCKKPGH------FIADCPDLQKEK--------FKGKSKKSSFNSSKFRKQIKKSL 357
KG F KK G + +D E+ + S F + + I L
Sbjct: 425 KGYFKKKKYGQAHIGEEWNSDDESSSSEEEEVVANVAIQSTSSAQLFTNLQDDSYIPTCL 484
Query: 358 MATWEDLDSESGSDKEEADDDAKAA-------VGL----VATVSSEAVSEAESDSEDENE 406
MA + + S + DDD A GL V T E + + ++ + + +
Sbjct: 485 MAKGDKVTLFSNDFSNDDDDDQIAMKNKMIKEFGLNGYNVITKLMEKLDKRKATLDAQED 544
Query: 407 VYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQ---KSTLLELKASEEEL- 462
+ + L EL L ++ E+ +LK +L ++ +S++L L +EL
Sbjct: 545 LLILEKERNL-----ELQELIHNKDIEVINLKTSIDNLANEKNALESSMLSLNVQNQELQ 599
Query: 463 ------KGFNLISTTYEDRLKSL------CQKLQEKCD-KGSGNKH--EIALDDFIM--A 505
K N + +E + S C K C KH ++ +++ + +
Sbjct: 600 VQLENCKNINAPTLVFESKSSSNDNSCKHCAKYHASCCLTNHARKHSPQVKVEEILKRCS 659
Query: 506 GIDRSKVASMIYSTYK--NKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGT---N 560
D K Y + K N +G+G++ K + + G +S EGT +
Sbjct: 660 SNDGLKKVEPKYKSLKPNNGRRGLGFNSSKENPST-------VHKGWRSPKFIEGTTLYD 712
Query: 561 AITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLIKPESKI 620
A+ + S + S L + L+ ++ + + K
Sbjct: 713 ALGRIHSSNDKSSQVYSSGGSSWVLDSGCTNHMTGEKDMFHTLQLTQEAQEIVFGDSGK- 771
Query: 621 PKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVQGRKSTIGNSSISINNVWLVD 680
K I G P ++DQ+ LS NV LVD
Sbjct: 772 --------------SKVIGIGKIP--ISDQQSLS--------------------NVLLVD 795
Query: 681 GLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINFSDLADQKVV 740
L +NLLS+SQ C GY+ FS + ++ ++D S+ F G+ +Y ++F+
Sbjct: 796 SLSYNLLSVSQLCGMGYNCLFSDVDVKILRREDSSVAFTGRLKGKLYLVDFTTSKVTPET 855
Query: 741 CLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSF 800
CL++ +DK W+WH+RL H R ++K+ K + GL N+ + D +CGACQ GK
Sbjct: 856 CLVAKSDKGWLWHRRLAHVGMRNLAKLQKDNHIIGLTNVVFEKDRVCGACQAGKQHGVPH 915
Query: 801 KSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVF 860
+SK++V+T RPLELLH+DLFGPV S+ GSKYGLVIVDD+SR+TWV F+ K E+
Sbjct: 916 QSKNVVTTKRPLELLHMDLFGPVAYISIGGSKYGLVIVDDFSRFTWVFFLSDKGETQEIL 975
Query: 861 SSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKN 920
F + Q E ELKI KVRSD+G EF+N E F + GI HEFS P TPQQNGVVERKN
Sbjct: 976 KKFMRRAQNEFELKIKKVRSDNGTEFKNTGVEEFLGEEGIKHEFSVPYTPQQNGVVERKN 1035
Query: 921 RTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFH 980
RTL E ARTM+ E +FWAEAVNT+C+ NR+Y+ + + TAYEL G +P + F
Sbjct: 1036 RTLIEAARTMLDEYKTPDNFWAEAVNTACHAINRLYLHKIYKKTAYELLTGNKPKVDYFR 1095
Query: 981 QLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESMHVKFDDREP 1040
GC +ILN K K + G GY+ + YRV+N+ T VE ++ V FD+
Sbjct: 1096 VFGCKCFILNKKVKSSKFAPRVDEGFLLGYASNAHGYRVFNNSTGLVEIAIDVTFDE--- 1152
Query: 1041 GSKTSEQSESNAGTTDSEDASES----------DQPSDSEKYT----------------- 1073
S S+ SN + + ES Q D E+ T
Sbjct: 1153 -SNGSQGHVSNDTVGNEKLPCESIKKLAIGEVRPQERDDEEGTLWMTNEVVDVGARVVSD 1211
Query: 1074 --EVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQ------DNTQQVIQ-------P 1118
++ P P E N + P+ V++E + D + N ++ IQ P
Sbjct: 1212 NVSTQANPSTSSHPNHEENHQRMPT-VVEDEQENIDGEVPLDQVTNEEEQIQRHPSVPHP 1270
Query: 1119 KFKH--KSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAM 1176
+ H + HP + I+GS TRS +S +EP VEEAL D WI AM
Sbjct: 1271 RVHHTIQRDHPVDNILGSIRRGVTTRSRLANFCEFYSFVSSLEPLKVEEALDDPDWITAM 1330
Query: 1177 QEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGID 1236
QEELN F RN+VW LV +P Q N+IGTKWVFRNK +E G VT+NKARLVAQGY+Q EG+D
Sbjct: 1331 QEELNNFTRNEVWSLVQRPKQ-NVIGTKWVFRNKQDENGVVTKNKARLVAQGYTQVEGLD 1389
Query: 1237 YTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHP 1296
+ ET+APVARLE+IR+L++YA NH LYQMDVKSAFLNG ++E VYV+QPPGFED K P
Sbjct: 1390 FGETYAPVARLESIRILIAYATNHDFKLYQMDVKSAFLNGPLQERVYVEQPPGFEDPKKP 1449
Query: 1297 DHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDD 1356
+HVY L K+LYGLKQAPRAWYD L +FLIKN F G+ D+TLF R + ++ + QIYVDD
Sbjct: 1450 NHVYLLHKALYGLKQAPRAWYDCLKDFLIKNGFTIGKADSTLFTRKVDNELFVCQIYVDD 1509
Query: 1357 IIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKF 1416
IIFGSTN C+EFSK+M + FEMSMMGELK+FLG Q+ Q KEG ++ QTKYT+++LKKF
Sbjct: 1510 IIFGSTNEKFCEEFSKVMTNRFEMSMMGELKYFLGFQVKQLKEGTFLCQTKYTQDMLKKF 1569
Query: 1417 KLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQ 1476
+E K TPM L + G VDQKLYR MIGSLLYL ASRPDI+ SVC+CARFQ
Sbjct: 1570 GMEKAKHAKTPMPSNGHLDLNEEGKPVDQKLYRSMIGSLLYLCASRPDIMLSVCMCARFQ 1629
Query: 1477 SDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQF 1536
++P++ HL AVKRI RYL T NLGL Y K + L+G+ D+DYAG +++RKST+G CQF
Sbjct: 1630 ANPKDCHLVAVKRILRYLVHTQNLGLWYPKGSFFDLLGYSDSDYAGCKVDRKSTTGTCQF 1689
Query: 1537 LGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTA 1596
LG +L+SW+SK+Q +A+STAEAEYI+A +CC QLLWMK L D+ N IP+ CDN +
Sbjct: 1690 LGRSLVSWSSKKQNCVALSTAEAEYIAAGACCAQLLWMKQTLRDFGCEFNKIPLLCDNES 1749
Query: 1597 AICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDI 1631
AI L+ NP+ HSR KHI+I+ HF+R++ KG +++
Sbjct: 1750 AIKLANNPVQHSRTKHIDIRRHFLRDHEAKGDIEL 1784
>gb|AAN60991.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902324|ref|NP_912508.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2011
Score = 985 bits (2546), Expect = 0.0
Identities = 629/1678 (37%), Positives = 898/1678 (53%), Gaps = 149/1678 (8%)
Query: 29 GKAPKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQ 88
GKAP FNG +S WK M + + + +W I++ G AI T
Sbjct: 9 GKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVDVGF----------AITGTPLTEID 56
Query: 89 KKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQ 148
+ K + + ++ S+ + E+ ++S+ TA ++ L E + + K+AK L Q
Sbjct: 57 HRNLKLNAQAMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAKLHFLKIQ 116
Query: 149 YELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEA 208
YE F M ES+ +MY R +V+ L+ L +Y + K+LR+LP ++ VT + +
Sbjct: 117 YETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETLVTMLINS 176
Query: 209 KDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPD 268
D++ ++ L+ + ++M ++ KK A PSK I+ ++ S+S+ +
Sbjct: 177 -DMSRMTPASLLGKINTNDM----YKLKKKEMEEASPSKKCIALQAEVEDKSKSKVNEVN 231
Query: 269 GDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKG-------CFNCKKPG 321
D +E+ + +L+ + L ++K+ RGS N ++ + CF C
Sbjct: 232 KDLEEE----IVLLARRFNDLLGRRKE--RGRGSNSNRRRNRRPNKTLSNLRCFEC---- 281
Query: 322 HFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKA 381
D +E + K+ K +++A E A
Sbjct: 282 -------DSNEESSASSGSEEEGGDDASSKKKKMAVVAIKE-------------APSLFA 321
Query: 382 AVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKY 441
+ L+A S+ S ++S+S+D+ + + ELV +EL + E + LK+ +
Sbjct: 322 PLCLMAKSPSKVTSLSDSESDDDCD---DVSYDELVSMFEELHAYSEKEIIKFKTLKKDH 378
Query: 442 VD---LMKQQKSTLLELKASEEELKGF--NLISTTYEDRLKSLCQKLQEKCDKGSGNKHE 496
L ++ K++ L S E+LK NL+STT L + CD
Sbjct: 379 ASLEVLYEELKTSHERLTISHEKLKEAHDNLLSTTQHGALID----VGISCD-------- 426
Query: 497 IALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEKS-----------KEYSLKSYCDC 545
LDD I + VAS ST + + S S + LK
Sbjct: 427 -LLDDSATCHI--AHVASSSISTSCDDLMDMPNSSSSSCVSICDASLVVENNELKEQVAK 483
Query: 546 IKDGLKSTFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKR 605
+ L+ F +G N + + S+ Q I +K E L + P + + +K
Sbjct: 484 LNKSLERCF--KGKNTLDKILSE------QQCILNK-EGLGFILKKGKKPSHRATRFVKS 534
Query: 606 SEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVQG---R 662
+ K SK + N S + G + D+ + +V G
Sbjct: 535 NG-------KYCSKCREVGHLVNYRTGGSHWVLDSGCTQHMTGDRAMFTTF-EVGGNEQE 586
Query: 663 KSTIGNSS---------ISINN------VWLVDGLKHNLLSISQFCDNGYDVTFSKTNCT 707
K T G++S I+I+N V LV L NLLS++Q CD F
Sbjct: 587 KVTFGDNSKGKVIGLGKIAISNDLSIDNVSLVKSLNFNLLSVAQICDLVLSCAFFPQEVI 646
Query: 708 LVNKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKI 767
+ + DKS F G R N+Y +F+ CL++ W+WH+RL H +SK+
Sbjct: 647 VSSLLDKSCVFKGFRYGNLYLGDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKL 706
Query: 768 SKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTAS 827
SK LV GL ++ + D LC ACQ GK V S +K I+STSRPLELLH++ FGP S
Sbjct: 707 SKRDLVVGLKDVKFEKDKLCSACQAGKQVACSHPTKSIMSTSRPLELLHMEFFGPTTYKS 766
Query: 828 LYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFE 887
+ G+ + LVIVDDYSR+TW+ F+ K E+F F + Q E ++K+RSD+G +F+
Sbjct: 767 IGGNSHCLVIVDDYSRYTWMFFLHDKSIVAELFKKFAKRGQNEFNCTLVKIRSDNGSKFK 826
Query: 888 NEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNT 947
N E +C+ GI HE S+ +PQQNGVVE KNRTL EMARTM+ E ++ FWAEA+NT
Sbjct: 827 NTNIEDYCDDLGIKHELSATYSPQQNGVVEMKNRTLIEMARTMLDEYGVSDSFWAEAINT 886
Query: 948 SCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIF 1007
+C+ NR+Y+ + + T+YEL GR+PN++ F GC YI L K ++ G
Sbjct: 887 ACHATNRLYLHRLLKKTSYELIVGRKPNVAYFRVFGCKCYIYRKGVRLTKFESRCDEGFL 946
Query: 1008 XGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPS 1067
GY+ SKAYRVYN VEE+ V+FD+ GS+ ++ + G A ++
Sbjct: 947 LGYASNSKAYRVYNKNKGIVEETADVQFDETN-GSQEGHENLDDVGDEGLMRAMKNMSIG 1005
Query: 1068 DSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKH---KS 1124
D K EVE P + + E ++ A PS ++ E ++ Q + P H
Sbjct: 1006 D-VKPIEVEDKPST--STQDEPSTSATPS-----QAQVEVEEEKAQDLPMPPRIHTALSK 1057
Query: 1125 SHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQ 1184
HP + ++G +TRS +S +EPK V+EAL D WI AM +ELN F
Sbjct: 1058 DHPIDQVLGDISKGVQTRSRVASICEHYSFVSCLEPKHVDEALCDPDWINAMHKELNNFA 1117
Query: 1185 RNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPV 1244
RN VW LV + N+IGTKWVFRNK +E G V RNKAR VAQG++Q EG+D+ ETFAPV
Sbjct: 1118 RNKVWTLVERLRDHNVIGTKWVFRNKQDENGLVVRNKARFVAQGFTQVEGLDFGETFAPV 1177
Query: 1245 ARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKK 1304
RLEAI +LL++A I L+QMDVKSAFLNG + E V+V+QPPGFED K+P+HVYKL K
Sbjct: 1178 TRLEAICILLAFASCFNIKLFQMDVKSAFLNGEIAELVFVEQPPGFEDPKYPNHVYKLSK 1237
Query: 1305 SLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNA 1364
+LYGLKQAPRAWY+RL +FL+ DF+ G+VDTTLF + + D + QIYVDDIIFG TN
Sbjct: 1238 ALYGLKQAPRAWYERLRDFLLSKDFKIGKVDTTLFTKIIGDDFFVCQIYVDDIIFGCTNE 1297
Query: 1365 SLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVM 1424
CKEF +M EFEMSM+GEL FF G+QI Q K+G F LED K +
Sbjct: 1298 VFCKEFGDMMSREFEMSMIGELSFFHGLQIKQLKDGT--------------FGLEDAKPI 1343
Query: 1425 NTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHL 1484
TPM L ++ G VD KLYR MIGSLLYLTASRPDI+FSVC+CARFQ+ P+E HL
Sbjct: 1344 KTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHL 1403
Query: 1485 TAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISW 1544
AVKRI RYLK ++ +GL Y K +KL+G+ D+DYAG +++RKSTSG+CQ LG +L+SW
Sbjct: 1404 VAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDSDYAGCKVDRKSTSGSCQMLGRSLVSW 1463
Query: 1545 ASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNP 1604
+SK+Q +A+ AEAEY+SA SCC QLLWMK L DY I+ P+ C+N +AI ++ NP
Sbjct: 1464 SSKKQNFVALFIAEAEYVSAGSCCAQLLWMKQILLDYGISFTKTPLLCENDSAIKIANNP 1523
Query: 1605 ILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
+ HSR KHI+I+HHF+R++V K + I I TE Q ADIFTKPL RF ++ LN+
Sbjct: 1524 VQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNL 1581
>gb|AAC49502.1| Pol [Zea mays] gi|7489803|pir||T04112 pol protein homolog - maize
retrotransposon Opie-2
Length = 1068
Score = 972 bits (2513), Expect = 0.0
Identities = 508/1057 (48%), Positives = 678/1057 (64%), Gaps = 43/1057 (4%)
Query: 632 TASEKTIPKGVKPKVLNDQKPLSIHPKVQGRKSTIGNSSIS----INNVWLVDGLKHNLL 687
T +K VK K + Q + QG+ +G +IS I+NV+LV+ L +NLL
Sbjct: 22 TGEKKMFTSYVKNK--DSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVFLVESLGYNLL 79
Query: 688 SISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMND 747
S+SQ C+ GY+ F+ + ++ + D S+ F G +Y ++F+ CL++
Sbjct: 80 SVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAGLDACLIAKTS 139
Query: 748 KKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVS 807
W+WH+RL H + + K+ K + V GL N+ + D C ACQ GK V S +K++++
Sbjct: 140 MGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVGGSHHTKNVMT 199
Query: 808 TSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQI 867
TSRPLE+LH+DLFGPV S+ GSKYGLVIVDD+SR+TWV F++ K F +
Sbjct: 200 TSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKSETQGTLKRFLRRA 259
Query: 868 QYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMA 927
Q E ELK+ K+RSD+G EF+N E F E+ GI HEFS+P TPQQNGVVERKNRTL +MA
Sbjct: 260 QNEFELKVKKIRSDNGSEFKNLQVEEFLEEEGIKHEFSAPYTPQQNGVVERKNRTLIDMA 319
Query: 928 RTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXY 987
RTM+ E + FW EAVNT+C+ NR+Y+ + + T+YEL G +PN+S F G Y
Sbjct: 320 RTMLGEFKTPECFWTEAVNTACHAINRVYLHRILKNTSYELLTGNKPNVSYFRVFGSKCY 379
Query: 988 ILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQ 1047
IL K K KA G GY +KAYRV+N + VE S V FD E EQ
Sbjct: 380 ILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSGDVVFD--ETNGSPREQ 437
Query: 1048 SESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASED 1107
D +D E D P+ + + + E+ P+ + E +PSP ++D
Sbjct: 438 ------VVDCDDVDEEDIPTAA-----IRTMAIGEVRPQEQDERE-QPSPSTMVHPPTQD 485
Query: 1108 FQDNTQQVI----------------------QPKFKHKSSHPEELIIGSKDSPRRTRSHF 1145
+ QQ + Q + + HP + I+G TRS
Sbjct: 486 DEQVHQQEVCDQGGAQDDHVLEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRL 545
Query: 1146 RQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKW 1205
+S IEP VEEAL D W+LAMQEELN F+RN+VW LVP+P Q N++GTKW
Sbjct: 546 VNFCEHNSFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPKQ-NVVGTKW 604
Query: 1206 VFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILY 1265
VFRNK +E+G VTRNKARLVA+GY+Q G+D+ ETFAPVARLE+IR+LL+YA +H LY
Sbjct: 605 VFRNKQDERGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRLY 664
Query: 1266 QMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLI 1325
QMDVKSAFLNG ++EEVYV+QPPGFED ++PDHV KL K+LYGLKQAPRAWY+ L +FLI
Sbjct: 665 QMDVKSAFLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFLI 724
Query: 1326 KNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGE 1385
N F+ G+ D TLF +T D+ + QIYVDDIIFGSTN C+EFS++M +FEMSMMGE
Sbjct: 725 ANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMGE 784
Query: 1386 LKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQ 1445
L +FLG Q+ Q K+G ++ QTKYT++LLK+F ++D K TPM G VDQ
Sbjct: 785 LNYFLGFQVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQ 844
Query: 1446 KLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1505
K YR MIGSLLYL ASRPDI+ SVC+CARFQSDP+E HL AVKRI RYL T GL Y
Sbjct: 845 KAYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWYP 904
Query: 1506 KSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAA 1565
K + L+G+ D+DYAG +++RKSTSG CQFLG +L+SW SK+Q ++A+STAEAEY++A
Sbjct: 905 KGSTFDLVGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAAG 964
Query: 1566 SCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQ 1625
CC QLLWM+ L D+ N + +P+ CDN +AI +++NP+ HSR KHI+I+HHF+R++ Q
Sbjct: 965 QCCAQLLWMRQTLRDFGYNLSKVPLLCDNESAIRMAENPVEHSRTKHIDIRHHFLRDHQQ 1024
Query: 1626 KGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
KG +++ + TE+Q ADIFTKPL + F ++ LN+
Sbjct: 1025 KGDIEVFHVSTENQLADIFTKPLDEKTFCRLRSELNV 1061
>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 962 bits (2487), Expect = 0.0
Identities = 531/1152 (46%), Positives = 704/1152 (61%), Gaps = 79/1152 (6%)
Query: 573 GSQAKITSKPENLKIKVMTKSD-PKSQKIKIL-------KRSEPVHQNLIKPESKIPKQK 624
G KI + P+NL V K+ P+ + IL +S+ +H K S
Sbjct: 750 GDNVKINAPPKNLSNFVKGKAPMPQDNEGYILYPAGYPENKSKKIHSR--KSHSGPNYAF 807
Query: 625 DQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVQGRK----STIGNSSISINNVWLVD 680
K + + + + T K + K +N +I K S G S W++D
Sbjct: 808 MYKGETSRSRQPTHAKLPRKKTINASNDHAISFKTFDASYVLTSKCGKVYASGGTSWILD 867
Query: 681 --------GLKHNLLSISQFCDNGYDVTFSKTN------CTLVNKDDKSITFNGKRVENV 726
G K S + D +TF N T+ + D SI F G +
Sbjct: 868 SGCTNHMTGEKKMFSSYEKNKDPQRAITFGDGNQGLVKGVTVFRRSDDSIAFKGVLEGQL 927
Query: 727 YKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL 786
Y + F D A+ CL++ + W+WH+RL H + + K+ K + + GL N+ + D +
Sbjct: 928 YLVVF-DRAELDT-CLIAKTNMGWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDRI 985
Query: 787 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 846
C ACQ GK V + K+I++T RPLELLH+DLFGP+ S+ GSKY LVIVDDYSR+TW
Sbjct: 986 CSACQAGKQVGTHHPHKNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTW 1045
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
V F++ K E F + Q E L+I K+RSD+G EF+N E F E+ GI HEFSS
Sbjct: 1046 VFFLQEKSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEEEGIKHEFSS 1105
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
P TPQQNGVVERKNRTL +MARTM+ E FWAEAVNT+CY NR+Y+ + + T+Y
Sbjct: 1106 PYTPQQNGVVERKNRTLLDMARTMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSY 1165
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
EL G++PNIS F G +IL + K K G GY ++AYRV+N T
Sbjct: 1166 ELLTGKKPNISYFRVFGSKCFILIKRGRKSKFAPKTVEGFLLGYDSNTRAYRVFNKSTGL 1225
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEV-ESCP-EAEIT 1084
VE S V FD E + S D ++ E P + + + + CP E+E
Sbjct: 1226 VEVSCDVVFD---------ETNGSQVEQVDLDEIGEEQAPCIALRNMSIGDVCPKESEEP 1276
Query: 1085 PEAESN--SEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSS----------------- 1125
P + S + SP QNE +++ ++ Q+V P+ K
Sbjct: 1277 PSTQDQPPSSMQASPPTQNEDEAQNDEEQNQEVKPPQDKSNDQGGDTNDQEKEDEEEPRP 1336
Query: 1126 ------------HPEELIIGSKDSPRRTRS---HFRQEESLIGLLSIIEPKTVEEALSDD 1170
HP + I+G TRS HF + S + S IEP VEEAL D
Sbjct: 1337 PHPRVHQAIQRDHPVDTILGDIHKGVTTRSRVAHFCEHYSFV---SSIEPHRVEEALQDS 1393
Query: 1171 GWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYS 1230
W++AMQEELN F RN+VW LVP+P+Q N++GTKWVFRNK +E G VTRNKARLVA+GYS
Sbjct: 1394 DWVVAMQEELNNFTRNEVWHLVPRPNQ-NVVGTKWVFRNKQDEHGVVTRNKARLVAKGYS 1452
Query: 1231 QQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGF 1290
Q EG+D+ ET+APVARLE+IR+LL+YA HG LYQMDVKSAFLNG ++EEVYV+QPPGF
Sbjct: 1453 QVEGLDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGF 1512
Query: 1291 EDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIV 1350
ED ++P+HVY+L K+LYGLKQAPRAWY+ L +FLI N F+ G+ D TLF +TL+ D+ +
Sbjct: 1513 EDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVC 1572
Query: 1351 QIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTK 1410
QIYVDDIIFGSTN S C+EFS++M +FEMSMMGELK+FLG Q+ Q +EG ++ QTKYT+
Sbjct: 1573 QIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLREGTFISQTKYTQ 1632
Query: 1411 ELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVC 1470
++L KF ++D K + TPM L + G VDQK+YR MIGSLLYL ASRPDI+ SVC
Sbjct: 1633 DILAKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVC 1692
Query: 1471 LCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKST 1530
+CARFQSDP+ESHLTAVKRI RYL T GL Y + + LIG+ DAD+AG +I RKST
Sbjct: 1693 MCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADWAGCKINRKST 1752
Query: 1531 SGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPI 1590
SG CQFLG +L+SWASK+Q ++A+STAEAEYI+A CC QLLWM+ L DY +P+
Sbjct: 1753 SGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPL 1812
Query: 1591 YCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSV 1650
CDN +AI ++ NP+ HSR KHI I++HF+R++ QKG ++I +I+T+ Q ADIFTKPL
Sbjct: 1813 LCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDE 1872
Query: 1651 ERFEFIKKNLNM 1662
+ F ++ LN+
Sbjct: 1873 QSFTRLRHELNI 1884
Score = 115 bits (288), Expect = 1e-23
Identities = 124/484 (25%), Positives = 208/484 (42%), Gaps = 59/484 (12%)
Query: 4 DEESVTTK------YTSVKHDYDTADKKTDS-----GKAPKFNGDPEEFSWWKTNMYSFI 52
D SVT+K Y+ + Y K T GK P FNG E+++ W M +
Sbjct: 95 DAASVTSKRQERKKYSKIPLRYPRVPKHTPLLSVPLGKPPTFNG--EDYAMWSNLMRFHL 152
Query: 53 MGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYM 112
L + +WD++E GV + +E D ++ + + I++AS+ + EY
Sbjct: 153 TSLHKRIWDVVEYGVQVPSIGDEDYDTDE------VAQIEHFNSQAATILLASLSKEEYN 206
Query: 113 KMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEMYSRFQTLVS 172
K+ AK ++ L EG + K K + + F + E ++MY+R +TLV+
Sbjct: 207 KVQGLKNAKEIWDLLKTAHEGDELTKITKRETIEGELGRFHLRQGEEPQDMYNRLKTLVN 266
Query: 173 GLQILKKSYVASDHVSK-ILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLN 231
++ L + V K ILR+L +V I ++ E+++ + E +
Sbjct: 267 QVRNLGSTKWDDHEVVKVILRALIFLNPTQVQLIRGNPRYPLMTPEEVIGNFVSFECMI- 325
Query: 232 EHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLAR 291
+ SKK + PS + A+KA+E ++E + Q + + L N+ L
Sbjct: 326 --KGSKKINELDEPSTSEAQPV--AFKATEEKKEE---STPSRQPIDASKLDNEEMALII 378
Query: 292 KQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRK 351
K + + K+ K+ K +K C+ C KPGHFIA CP + + +G KK K
Sbjct: 379 KSFRQILKQRKGKDYKPRSKKVCYKCGKPGHFIAKCP-MSSDSDRGDDKKGRRKEKKRYY 437
Query: 352 QIKKSLMATWEDLDS-ESGSDKEEADDDAKAAV--GLV-----------------ATVSS 391
+ K + DS ES SD + +D A AV GL+ S
Sbjct: 438 KKKGGDAHVCREWDSDESSSDSSDDEDAANIAVTKGLLFPNVGHKCLMAKDGKKKVKSKS 497
Query: 392 EAVSEAESDSEDENE------VYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLM 445
E SD +D+NE +++ + E + L EL+S H ++L D +E + L+
Sbjct: 498 STKYETSSDEDDKNEEDNLRILFANL-NMEQKEKLNELISAI-HEKDDLLDSQEDF--LI 553
Query: 446 KQQK 449
K+ K
Sbjct: 554 KENK 557
>ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)]
gi|28269414|gb|AAO37957.1| putative gag-pol polyprotein
[Oryza sativa (japonica cultivar-group)]
Length = 1969
Score = 958 bits (2476), Expect = 0.0
Identities = 486/996 (48%), Positives = 660/996 (65%), Gaps = 10/996 (1%)
Query: 668 NSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVY 727
N + +V LV LK+NLLS+SQ CD +V F K +++ + + F+ RV V+
Sbjct: 802 NDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVF 860
Query: 728 KINFSDLADQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL 786
NF A CL+ S N + WH+RLGH + +S+IS + L++GLP + D +
Sbjct: 861 FANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVQKDLV 920
Query: 787 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 846
C C+ GK+ SS K +V T P +LLH+D GP S+ G Y LV+VDD+SR++W
Sbjct: 921 CAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSW 980
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
V F++SK+ F S + E + +RSD+G EF+N FE FC+ G+ H+FSS
Sbjct: 981 VYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSS 1040
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
P PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R + T Y
Sbjct: 1041 PYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPY 1100
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
EL GRRP +S+ GC ++L + + L K +++ GIF GY+ S+AYRVY T
Sbjct: 1101 ELRFGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNK 1159
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPE 1086
+ E+ V FD+ PG++ + ED+ + D D ++S P + T
Sbjct: 1160 IVETCEVTFDEASPGARPEISGVPDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGS 1216
Query: 1087 AESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR 1146
+ S + +P + SA+E+ T P+ P+ +I G + R RS+
Sbjct: 1217 PSTTSPSGDAPTTSS-SAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYEL 1275
Query: 1147 QEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWV 1206
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWV
Sbjct: 1276 VNSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWV 1332
Query: 1207 FRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQ 1266
F+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+Q
Sbjct: 1333 FKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQ 1392
Query: 1267 MDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1326
MDVKSAFLNGV+EEEVYVKQPPGFE+ K P+HV+KL+K+LYGLKQAPRAWY+RL FL++
Sbjct: 1393 MDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQ 1452
Query: 1327 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1386
N FE G VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL
Sbjct: 1453 NGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGEL 1512
Query: 1387 KFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK 1446
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1513 TFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQR 1572
Query: 1447 LYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK 1506
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKRIFRY+K T G+ Y
Sbjct: 1573 EYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSC 1632
Query: 1507 SLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAAS 1566
S + F DAD+AG +I+RKSTSG C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1633 SSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAAS 1692
Query: 1567 CCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQK 1626
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+R+ V+K
Sbjct: 1693 ACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEK 1752
Query: 1627 GILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
G + ++F+++E Q ADIFTKPL RFEF++ L +
Sbjct: 1753 GTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1788
Score = 116 bits (291), Expect = 6e-24
Identities = 155/680 (22%), Positives = 264/680 (38%), Gaps = 82/680 (12%)
Query: 31 APKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPA 87
A F D F WK M +++ +W+ ++ DD D+ TPA
Sbjct: 7 AKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDADI------------TPA 54
Query: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH 147
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 55 NMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHK 114
Query: 148 QYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIE 206
+Y+ F M ESI+ + RF ++S L+ + K + +D+ +L L W KVT+I
Sbjct: 115 EYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSIT 174
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
E+ L+ L+++ L S LK HEM + + K S ++ G S + A+ +
Sbjct: 175 ESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAA 234
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIAD 326
++E + + L ARK + K K + CF C +P H +
Sbjct: 235 LHSVTEEQLE---KIPEDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHKRVN 291
Query: 327 CPDLQKEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKA 381
CP L+K+ K +KK K +K + K ++A E++ S+ SD ++ + K
Sbjct: 292 CPKLKKKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 350
Query: 382 AVGLVATVSSE--------AVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNE 433
G+ ++E A+ + + SE IP SL L N+
Sbjct: 351 FSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIP------SLDGSLCDDSCSDND 404
Query: 434 LTD---LKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKG 490
D KE+ LM + K E+LK N RL+S+ + ++ C
Sbjct: 405 SVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPE-EDTCSTC 463
Query: 491 SGNKHEI-ALDDFIMA---GIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCI 546
+ EI L D + + G AS ST +G E + KE
Sbjct: 464 ASYLSEINLLKDKLKSCALGAGNPSSASAACSTCYEMKVDMGLLEMELKE---------- 513
Query: 547 KDGLKSTFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRS 606
LK FV + I ++ P + ++ + LK TK+D ++
Sbjct: 514 ---LKEKFVHD---RIGRCENCPILTSDNDELRQQVAMLK----TKND----LLESFATK 559
Query: 607 EPVHQN-----LIKPESKIPKQKDQKNKAATASEKTIPKGV---KPKVLNDQKPLSIHPK 658
EP+H + +++ E K K K+ + I V K N S+
Sbjct: 560 EPIHSSCANCAILETELKDAKTVIDSIKSIDSCSSCISLKVDLESAKKENSYLQQSLERF 619
Query: 659 VQGRKS---TIGNSSISINN 675
QG+K + S +SINN
Sbjct: 620 AQGKKKLNMILDQSKVSINN 639
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)] gi|34902378|ref|NP_912535.1| Putative
Zea mays retrotransposon Opie-2 [Oryza sativa (japonica
cultivar-group)]
Length = 2145
Score = 956 bits (2471), Expect = 0.0
Identities = 485/996 (48%), Positives = 660/996 (65%), Gaps = 10/996 (1%)
Query: 668 NSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVY 727
N + +V LV LK+NLLS+SQ CD +V F K +++ + + F+ RV V+
Sbjct: 802 NDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVF 860
Query: 728 KINFSDLADQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL 786
NF A CL+ S N + WH+RLGH + +S+IS + L++GLP + D +
Sbjct: 861 FANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLV 920
Query: 787 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 846
C C+ GK+ SS K +V T P +LLH+D GP S+ G Y LV+VDD+SR++W
Sbjct: 921 CAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSW 980
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
V F++SK+ F S + E + +RSD+G EF+N FE FC+ G+ H+FSS
Sbjct: 981 VYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSS 1040
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
P PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R + T Y
Sbjct: 1041 PYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPY 1100
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
EL GRRP +S+ GC ++L + + L K +++ GIF GY+ S+AYRVY T
Sbjct: 1101 ELRFGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNK 1159
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPE 1086
+ E+ V FD+ PG++ + ED+ + D D ++S P + T
Sbjct: 1160 IVETCEVTFDEASPGARPEISGVPDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGS 1216
Query: 1087 AESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR 1146
+ S + +P + SA+E+ T P+ P+ +I G + R RS+
Sbjct: 1217 PSTTSPSGDAPTTSS-SAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYEL 1275
Query: 1147 QEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWV 1206
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWV
Sbjct: 1276 VNSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWV 1332
Query: 1207 FRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQ 1266
F+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+Q
Sbjct: 1333 FKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQ 1392
Query: 1267 MDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1326
MDVKSAFLNGV+EEEVYVKQPPGFE+ K P+HV+KL+K+LYGLKQAPRAWY+RL FL++
Sbjct: 1393 MDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQ 1452
Query: 1327 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1386
N FE G VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL
Sbjct: 1453 NGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGEL 1512
Query: 1387 KFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK 1446
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1513 TFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQR 1572
Query: 1447 LYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK 1506
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKR+FRY+K T G+ Y
Sbjct: 1573 EYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSC 1632
Query: 1507 SLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAAS 1566
S + F DAD+AG +I+RKSTSG C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1633 SSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAAS 1692
Query: 1567 CCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQK 1626
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+R+ V+K
Sbjct: 1693 ACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEK 1752
Query: 1627 GILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
G + ++F+++E Q ADIFTKPL RFEF++ L +
Sbjct: 1753 GTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1788
Score = 115 bits (288), Expect = 1e-23
Identities = 154/680 (22%), Positives = 264/680 (38%), Gaps = 82/680 (12%)
Query: 31 APKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPA 87
A F D F WK M +++ +W+ ++ DD D+ TPA
Sbjct: 7 AKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDADI------------TPA 54
Query: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH 147
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 55 NMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHK 114
Query: 148 QYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIE 206
+Y+ F M ESI+ + RF ++S L+ + K + +D+ +L L W KVT+I
Sbjct: 115 EYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSIT 174
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
E+ L+ L+++ L S LK HEM + + K S ++ G S + A+ +
Sbjct: 175 ESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAA 234
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIAD 326
++E + + L ARK + K K + CF C +P H +
Sbjct: 235 LHSVTEEQLE---KIPEDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHKRVN 291
Query: 327 CPDLQKEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKA 381
CP L+K+ K +KK K +K + K ++A E++ S+ SD ++ + K
Sbjct: 292 CPKLKKKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 350
Query: 382 AVGLVATVSSE--------AVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNE 433
G+ ++E A+ + + SE IP SL L N+
Sbjct: 351 FSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIP------SLDGSLCDDSCSDND 404
Query: 434 LTD---LKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKG 490
D KE+ LM + K E+LK N RL+S+ + ++ C
Sbjct: 405 SVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPE-EDTCSTC 463
Query: 491 SGNKHEI-ALDDFIMA---GIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCI 546
+ EI L D + + G AS ST +G E + KE
Sbjct: 464 ASYLSEINLLKDKLKSCALGAGNPSSASAACSTCYEMKVDMGLLEMELKE---------- 513
Query: 547 KDGLKSTFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRS 606
LK FV + I ++ P + ++ + L+ TK+D ++
Sbjct: 514 ---LKEKFVHD---RIGRCENCPILTSDNDELRQQVAMLR----TKND----LLESFATK 559
Query: 607 EPVHQN-----LIKPESKIPKQKDQKNKAATASEKTIPKGV---KPKVLNDQKPLSIHPK 658
EP+H + +++ E K K K+ + I V K N S+
Sbjct: 560 EPIHSSCANCAILETELKDAKTVIDSIKSIDSCSSCISLKVDLESAKKENSYLQQSLERF 619
Query: 659 VQGRKS---TIGNSSISINN 675
QG+K + S +SINN
Sbjct: 620 AQGKKKLNMILDQSKVSINN 639
>ref|XP_474304.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultivar-group)]
gi|32488723|emb|CAE03600.1| OSJNBb0004A17.2 [Oryza sativa
(japonica cultivar-group)]
Length = 1877
Score = 956 bits (2471), Expect = 0.0
Identities = 485/996 (48%), Positives = 660/996 (65%), Gaps = 10/996 (1%)
Query: 668 NSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVY 727
N + +V LV LK+NLLS+SQ CD +V F K +++ + + F+ RV V+
Sbjct: 884 NDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVF 942
Query: 728 KINFSDLADQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL 786
NF A CL+ S N + WH+RLGH + +S+IS + L++GLP + D +
Sbjct: 943 FANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKVPKDLV 1002
Query: 787 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 846
C C+ GK+ SS K +V T P +LLH+D GP S+ G Y LV+VDD+SR++W
Sbjct: 1003 CAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVDDFSRYSW 1062
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
V F++SK+ F S + E + +RSD+G EF+N FE FC+ G+ H+FSS
Sbjct: 1063 VYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSS 1122
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
P PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R + T Y
Sbjct: 1123 PYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPY 1182
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
EL GRRP +S+ GC ++L + + L K +++ GIF GY+ S+AYRVY T
Sbjct: 1183 ELRFGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNK 1241
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPE 1086
+ E+ V FD+ PG++ + ED+ + D D ++S P + T
Sbjct: 1242 IVETCEVTFDEASPGARPEISGVPDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGS 1298
Query: 1087 AESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR 1146
+ S + +P + SA+E+ T P+ P+ +I G + R RS+
Sbjct: 1299 PSTTSPSGDAPTTSS-SAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYEL 1357
Query: 1147 QEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWV 1206
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWV
Sbjct: 1358 VNSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWV 1414
Query: 1207 FRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQ 1266
F+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+Q
Sbjct: 1415 FKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQ 1474
Query: 1267 MDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1326
MDVKSAFLNGV+EEEVYVKQPPGFE+ K P+HV+KL+K+LYGLKQAPRAWY+RL FL++
Sbjct: 1475 MDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQ 1534
Query: 1327 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1386
N FE G VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL
Sbjct: 1535 NGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGEL 1594
Query: 1387 KFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK 1446
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1595 TFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQR 1654
Query: 1447 LYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK 1506
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKR+FRY+K T G+ Y
Sbjct: 1655 EYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSC 1714
Query: 1507 SLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAAS 1566
S + F DAD+AG +I+RKSTSG C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1715 SSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAAS 1774
Query: 1567 CCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQK 1626
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+R+ V+K
Sbjct: 1775 ACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEK 1834
Query: 1627 GILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
G + ++F+++E Q ADIFTKPL RFEF++ L +
Sbjct: 1835 GTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1870
Score = 115 bits (288), Expect = 1e-23
Identities = 154/680 (22%), Positives = 264/680 (38%), Gaps = 82/680 (12%)
Query: 31 APKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGV---DDLDLDEEGAAIDRRIHTPA 87
A F D F WK M +++ +W+ ++ DD D+ TPA
Sbjct: 7 AKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDADI------------TPA 54
Query: 88 QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVH 147
+++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 55 NMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHK 114
Query: 148 QYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIE 206
+Y+ F M ESI+ + RF ++S L+ + K + +D+ +L L W KVT+I
Sbjct: 115 EYQRFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSIT 174
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEES 266
E+ L+ L+++ L S LK HEM + + K S ++ G S + A+ +
Sbjct: 175 ESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAA 234
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIAD 326
++E + + L ARK + K K + CF C +P H +
Sbjct: 235 LHSVTEEQLE---KIPEDDLALFARKFSRAYKNVRDRKRGKTNEPFVCFECGEPNHKRVN 291
Query: 327 CPDLQKEKFKGKSKKSSFNSSKFRKQIKK----SLMATWEDLD-SESGSDKEEADDDAKA 381
CP L+K+ K +KK K +K + K ++A E++ S+ SD ++ + K
Sbjct: 292 CPKLKKKSDK-TTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSDDDDQEKGDKD 350
Query: 382 AVGLVATVSSE--------AVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNE 433
G+ ++E A+ + + SE IP SL L N+
Sbjct: 351 FSGMCCLANNEDFINLCLMALEDKDDSSEHPEVCLDDIP------SLDGSLCDDSCSDND 404
Query: 434 LTD---LKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDKG 490
D KE+ LM + K E+LK N RL+S+ + ++ C
Sbjct: 405 SVDDELSKERMAHLMIEISDKYRSSKYKIEKLKSENDGMALEIARLRSMIPE-EDTCSTC 463
Query: 491 SGNKHEI-ALDDFIMA---GIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCI 546
+ EI L D + + G AS ST +G E + KE
Sbjct: 464 ASYLSEINLLKDKLKSCALGAGNPSSASAACSTCYEMKVDMGLLEMELKE---------- 513
Query: 547 KDGLKSTFVPEGTNAITAVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRS 606
LK FV + I ++ P + ++ + L+ TK+D ++
Sbjct: 514 ---LKEKFVHD---RIGRCENCPILTSDNDELRQQVAMLR----TKND----LLESFATK 559
Query: 607 EPVHQN-----LIKPESKIPKQKDQKNKAATASEKTIPKGV---KPKVLNDQKPLSIHPK 658
EP+H + +++ E K K K+ + I V K N S+
Sbjct: 560 EPIHSSCANCAILETELKDAKTVIDSIKSIDSCSSCISLKVDLESAKKENSYLQQSLERF 619
Query: 659 VQGRKS---TIGNSSISINN 675
QG+K + S +SINN
Sbjct: 620 AQGKKKLNMILDQSKVSINN 639
>ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1410
Score = 953 bits (2464), Expect = 0.0
Identities = 485/996 (48%), Positives = 659/996 (65%), Gaps = 10/996 (1%)
Query: 668 NSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFNGKRVENVY 727
N + +V LV LK+NLLS+SQ CD +V F K +++ + + F+ RV V+
Sbjct: 417 NDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPV-FDISRVGRVF 475
Query: 728 KINFSDLADQKVVCLL-SMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL 786
NF A CL+ S N + WH+RLGH + +S+IS + L++GLP + D +
Sbjct: 476 FANFDSSAPGPSRCLVASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKLKAPKDLV 535
Query: 787 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 846
C C+ GK+ SS K +V T P +LLH++ GP S+ G Y LV+VDD+SR++W
Sbjct: 536 CAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMNTVGPARVQSVGGKWYVLVVVDDFSRYSW 595
Query: 847 VKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSS 906
V F++SK+ F S + E + +RSD+G EF+N FE FC+ G+ H+FSS
Sbjct: 596 VYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSSGVEHQFSS 655
Query: 907 PRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMXEXTAY 966
P PQQNGVVERKNRTL EMARTM+ E + FW EA++ +C+I NR+++R + T Y
Sbjct: 656 PYVPQQNGVVERKNRTLVEMARTMLDEFTTPRKFWTEAISAACFISNRVFLRTILHKTPY 715
Query: 967 ELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAYRVYNSETQC 1026
EL GRRP +S+ GC ++L + + L K +++ GIF GY+ S+AYRVY T
Sbjct: 716 ELRFGRRPKVSHLRVFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNK 774
Query: 1027 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESCPEAEITPE 1086
+ E+ V FD+ PG++ + ED+ + D D ++S P + T
Sbjct: 775 IVETCEVTFDEASPGARPEISGVLDESIFVDEDSDDDD---DDSIPPPLDSTPPVQETGS 831
Query: 1087 AESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFR 1146
+ S + +P + SA+E+ T P+ P+ +I G + R RS+
Sbjct: 832 PSTTSPSGDAPTTSS-SAAEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYDL 890
Query: 1147 QEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWV 1206
+ + + EPK V ALSD+ W+ AM EEL F+RN VW LV P N+IGTKWV
Sbjct: 891 VNSAFV---ASFEPKNVCHALSDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWV 947
Query: 1207 FRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQ 1266
F+NKL E G + RNKARLVAQG++Q EG+D+ ETFAPVARLEAIR+LL++A + G L+Q
Sbjct: 948 FKNKLGEDGSIVRNKARLVAQGFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQ 1007
Query: 1267 MDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1326
MDVKSAFLNGV+EEEVYVKQPPGFE+ K P+HV+KL K+LYGLKQAPRAWY+RL FL++
Sbjct: 1008 MDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQ 1067
Query: 1327 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1386
N FE G VD TLF D L+VQIYVDDIIFG ++ +L +FS +M EFEMSMMGEL
Sbjct: 1068 NGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGEL 1127
Query: 1387 KFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK 1446
FFLG+QI Q+KEG++VHQTKY+KELLKKF + DCK + TPM T +L ++ G VDQ+
Sbjct: 1128 TFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQR 1187
Query: 1447 LYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRK 1506
YR MIGSLLYLTASRPDI FSVCLCARFQ+ PR SH AVKRIFRY+K T G+ Y
Sbjct: 1188 EYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSC 1247
Query: 1507 SLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAAS 1566
S + F DAD+AG +I+RKSTSG C FLG +L+SW+S++Q+++A STAEAEY++AAS
Sbjct: 1248 SSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAAS 1307
Query: 1567 CCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQK 1626
C+Q+LWM L+DY ++ + +P+ CDNT+AI ++KNP+ HSR KHIEI++HF+R+ V+K
Sbjct: 1308 ACSQVLWMISTLKDYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEK 1367
Query: 1627 GILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLNM 1662
G + ++F+++E Q ADIFTKPL RFEF++ L +
Sbjct: 1368 GTIVLEFVESEKQLADIFTKPLDRSRFEFLRSELGV 1403
Score = 108 bits (269), Expect = 2e-21
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 4/295 (1%)
Query: 85 TPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALM 144
TPA +++ R I+ I E+ ++ +A M+ +LC EG+ ++ +
Sbjct: 29 TPANMAQVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQ 88
Query: 145 LVHQYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVT 203
+Y+ F M ESI+ + RF +VS L+ + K + +D+ +L L W KVT
Sbjct: 89 FHKEYQRFEMHPGESIDSYFKRFGEIVSKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVT 148
Query: 204 AIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESE 263
+I E+ L+ L+++ L S LK HEM + + K S ++ G S + A+
Sbjct: 149 SITESAPLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVCGGFS 208
Query: 264 EESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHF 323
+ ++E + + L ARK + + K K + CF C +P H
Sbjct: 209 LAALHSVTEEQLE---KIPEDDLALFARKFSRAYKNVRNKKRGKTNEPFVCFECGEPNHI 265
Query: 324 IADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDD 378
+CP L+K+ K K +KK++ L+ SD + DDD
Sbjct: 266 RVNCPKLKKKSDKTTKKPEGQGRKGKNDLMKKAIHKVLAALEEVQLSDIDSDDDD 320
>gb|AAL35396.1| Opie2a pol [Zea mays]
Length = 1048
Score = 951 bits (2458), Expect = 0.0
Identities = 485/1021 (47%), Positives = 658/1021 (63%), Gaps = 25/1021 (2%)
Query: 658 KVQGRKSTIGNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSIT 717
KV+G +S SI+NV+LV+ L +N LS+SQ C+ GY+ F+ + ++ + D S+
Sbjct: 30 KVKGLGKIAISSEHSISNVFLVESLGYNFLSVSQLCNMGYNCLFTNVDVSVFRRSDGSLA 89
Query: 718 FNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLP 777
F G +Y ++F+ CL++ W+WH+RL H + + K+ K + V GL
Sbjct: 90 FKGVLDGKLYLVDFAKEEAGLDACLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLT 149
Query: 778 NIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVI 837
N+ + D C ACQ GK V+ S +K++++TSRPLE+LH+DLFGPV S+ GSKYGLVI
Sbjct: 150 NVQFKKDRPCVACQAGKQVRGSHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVI 209
Query: 838 VDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEPFELFCEK 897
VDD+SR+TWV F++ K + + Q E ELK+ K+RSD+G EF+N E F +
Sbjct: 210 VDDFSRFTWVFFLQDKSETQGTLKRYLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLVE 269
Query: 898 HGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYI 957
GI HEFS+P TPQQNGVVERKNRTL +MARTM+ E + FW+EAVNT+C+ NR+Y+
Sbjct: 270 EGIKHEFSAPYTPQQNGVVERKNRTLMDMARTMLGEFKTPERFWSEAVNTACHSINRVYL 329
Query: 958 RPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGYSERSKAY 1017
+ + T+YEL G +PN+S F G YIL K K KA G GY +KAY
Sbjct: 330 HRLLKNTSYELLTGNKPNVSYFRVFGSKCYILVKKGRTSKFAPKAVEGFLLGYDSNTKAY 389
Query: 1018 RVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDS-------- 1069
RV+N + VE S V FD E EQ + +D E D P+ +
Sbjct: 390 RVFNKSSGLVEVSSDVVFD--ETNGSLREQ------VVNLDDVDEEDVPTAAMRTMAIGD 441
Query: 1070 ---EKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQV-----IQPKFK 1121
+++ E + + + E P ++ ++D Q ++ Q +
Sbjct: 442 VRPQEHLEQDQPSSTTMVHPPTQDDEQAPQVGAHDQGGAQDVQVEEEEAPQAPPTQVRAT 501
Query: 1122 HKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELN 1181
+ +HP I+G TRS +S IEP VEE L D W+LAMQEELN
Sbjct: 502 IQRNHPVNQILGDISKGVTTRSRLVNFCEHYSFVSSIEPFRVEEVLLDPDWVLAMQEELN 561
Query: 1182 QFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETF 1241
F+RN+VW LVP+P Q N++GTKWVFRNK +E G VTRNKARLVA+GY+Q G+D+ ETF
Sbjct: 562 NFKRNEVWTLVPRPKQ-NVVGTKWVFRNKQDEHGVVTRNKARLVAKGYAQVAGLDFEETF 620
Query: 1242 APVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVYK 1301
APVARL++IR+ L+YA +H LYQMDVKSAFLNG ++EEVYV+QPPGFED + PDHV K
Sbjct: 621 APVARLKSIRIWLAYAAHHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERFPDHVCK 680
Query: 1302 LKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGS 1361
L K+LYGLKQAPRAWY+ L +FLI N F+ G+ D TLF +T D+ + QIYVDDIIFGS
Sbjct: 681 LSKALYGLKQAPRAWYECLRDFLIANAFKVGKADPTLFTKTCDGDLFVCQIYVDDIIFGS 740
Query: 1362 TNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDC 1421
TN + C+EFS++M +FEMSMMGEL +FLG Q+ Q K+G ++ QTKYT++L+K+F ++D
Sbjct: 741 TNQNSCEEFSRVMTQKFEMSMMGELSYFLGFQVRQLKDGTFISQTKYTQDLIKRFGMKDA 800
Query: 1422 KVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRE 1481
K TPM G VDQK YR IGSLLYL ASRPDI+ SVC+CARFQSDPRE
Sbjct: 801 KPAKTPMGTDGHTDLNKGGKSVDQKAYRSTIGSLLYLCASRPDIMLSVCMCARFQSDPRE 860
Query: 1482 SHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENL 1541
HL AVKRI RYL T G+ Y K + LIG+ D+DYA +++RKSTS CQFLG +L
Sbjct: 861 CHLVAVKRILRYLVATPCFGIWYPKGSTFDLIGYSDSDYARCKVDRKSTSRMCQFLGRSL 920
Query: 1542 ISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLS 1601
+SW SK+Q ++A+STAEAEY++ CC QLLWM+ L D+ N + +P+ CDN +AI ++
Sbjct: 921 VSWNSKKQTSVALSTAEAEYVAVGQCCAQLLWMRQTLRDFGYNLSEVPLLCDNESAIRIA 980
Query: 1602 KNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNLN 1661
+NP+ HSR KHI+I+HHF+R++ QKG++++ + +E+ ADIFTKPL + F + LN
Sbjct: 981 ENPVEHSRTKHIDIRHHFLRDHQQKGVIEVFHVSSENHLADIFTKPLDEQTFCKLHSELN 1040
Query: 1662 M 1662
+
Sbjct: 1041 V 1041
>emb|CAE04884.2| OSJNBa0042I15.6 [Oryza sativa (japonica cultivar-group)]
Length = 1510
Score = 917 bits (2369), Expect = 0.0
Identities = 478/981 (48%), Positives = 631/981 (63%), Gaps = 34/981 (3%)
Query: 711 KDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKL 770
+DD SI F G ++Y ++F CL++ + W+WH+RL H R ++ + K
Sbjct: 521 RDDSSIAFKGVLKGDLYLVDFDVDRVNPEACLIAKSSMGWLWHRRLAHVGMRNLASLLKG 580
Query: 771 QLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYG 830
+ + GL N+ + D +C ACQ GK V S K+I++T+RPLELLH+DLFGPV S+ G
Sbjct: 581 EHILGLSNVSFEMDRVCSACQAGKQVGSPHPIKNIMTTTRPLELLHMDLFGPVAYISIGG 640
Query: 831 SKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGGEFENEP 890
+KYG VIVDD+S +TWV F+ K A +VF F Q Q +L I +VRSD+GGEF+N
Sbjct: 641 NKYGFVIVDDFSCFTWVYFLHDKSEAQDVFKRFTKQAQNLYDLTIKRVRSDNGGEFKNTQ 700
Query: 891 FELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCY 950
E F ++ GI HEFS+P P QNG+VERKNRTL E AR M+ E + FWAEAV+T+C+
Sbjct: 701 VEEFLDEEGIKHEFSAPYDPPQNGIVERKNRTLIEAARAMLDEYKTSDVFWAEAVSTACH 760
Query: 951 IQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQRGIFXGY 1010
NR+Y+ + + T+YEL G++PN+S F G +IL+ K + K G GY
Sbjct: 761 AINRLYLHKILKKTSYELLSGKKPNVSYFRVFGSKFFILSKMPRSSKFSPKVDEGFLLGY 820
Query: 1011 SERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASES-DQP--S 1067
+ AYRV+N +T + +HV D +P ++ + +++D E DQP S
Sbjct: 821 ESNAHAYRVFN-KTSGEQVVIHV-VRDVDPSQAIGTKAIGDIRPVETQDDQEDRDQPPSS 878
Query: 1068 DSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNE-------SASEDF------------ 1108
S T V S E E+ + N P P+V S SED
Sbjct: 879 TSNSPTSVVSA-EPEVPGPIDRNLRTSPGPEVPGSTVRNLRTSGSEDVPTAQVDGIDAAG 937
Query: 1109 ------QDNTQQVIQPKFKH--KSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEP 1160
Q V P+ H + HP + I+G TRS +S +EP
Sbjct: 938 TLGHTDQAQVPLVHHPRIHHTVQRDHPVDNILGDIRKGVTTRSRVASFCQHYSFVSSLEP 997
Query: 1161 KTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRN 1220
VE+AL D W++AMQEELN F RN VW+LV +P Q N+IGTKW+FRNK +E V RN
Sbjct: 998 TRVEDALGDSDWVMAMQEELNNFARNQVWNLVERPKQ-NVIGTKWIFRNKQDEHVVVVRN 1056
Query: 1221 KARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEE 1280
KARLV QG++Q EG+D+ ETFAPVARLE+IR+LL+YA +H L+QMDVKSAFLNG + E
Sbjct: 1057 KARLVTQGFTQVEGLDFGETFAPVARLESIRILLAYAAHHDFRLFQMDVKSAFLNGPISE 1116
Query: 1281 EVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFR 1340
VYV+QPPGFED K P+HVYKL K+LYGLKQAPRAWY+ L +FL+KN FE G DTTLF
Sbjct: 1117 LVYVEQPPGFEDPKLPNHVYKLHKALYGLKQAPRAWYECLRDFLLKNGFEIGNADTTLFT 1176
Query: 1341 RTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEG 1400
+ K D+ I QIYVDDIIFGSTNAS C+EFS +M FEMSMMGEL FFL +Q+ Q++EG
Sbjct: 1177 KKFKSDLFICQIYVDDIIFGSTNASFCEEFSSIMTKRFEMSMMGELTFFLWLQVKQAQEG 1236
Query: 1401 VYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTA 1460
++ QTKY K++LKKF +ED K + TPM L +D G VDQK+YR MIGSLLYL A
Sbjct: 1237 TFISQTKYVKDILKKFGMEDAKPIKTPMPTNGHLDLDDNGKCVDQKVYRSMIGSLLYLCA 1296
Query: 1461 SRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADY 1520
SRPDI+ SVC+CARFQ++P+E HL AVKRI RYL T NLGL Y K D++L+G+ D+DY
Sbjct: 1297 SRPDIMLSVCMCARFQAEPKECHLIAVKRIQRYLVHTPNLGLWYPKGCDFELLGYSDSDY 1356
Query: 1521 AGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLED 1580
AG +++RKS +G CQFLG +L+SW K+Q +I +ST EAEY++A SCC QLLWMK L+D
Sbjct: 1357 AGCKVDRKSITGTCQFLGPSLVSWFPKKQNSIVLSTTEAEYVAAGSCCAQLLWMKQTLKD 1416
Query: 1581 YQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQW 1640
+ N P+ CDN +AI ++ NP+ HS+ KHI+I HHF+R++ KG + + + TE Q
Sbjct: 1417 FGYNFTKTPLLCDNESAIKIANNPVQHSKTKHIDIHHHFLRDHETKGDICLTHVRTETQL 1476
Query: 1641 ADIFTKPLSVERFEFIKKNLN 1661
ADIFTKPL +RF ++ LN
Sbjct: 1477 ADIFTKPLDEKRFCELRSELN 1497
Score = 96.7 bits (239), Expect = 6e-18
Identities = 107/436 (24%), Positives = 182/436 (41%), Gaps = 87/436 (19%)
Query: 52 IMGLDEELWDILEDGVD----DLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIP 107
++ L +W ++ GVD D++L E Q++L ++ + I++++
Sbjct: 5 LISLHPSIWKVVCTGVDVPHDDMELTSE------------QEQLIHRNAQASNAILSTLS 52
Query: 108 RTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMEDDESIEEMYSRF 167
E+ K+ AK + +L EGS V+EAK +L + F M+D E+ +EMY R
Sbjct: 53 LEEFNKVDGLEEAKEICDTLQLAHEGSPAVREAKIELLEGRLGRFVMDDKETPQEMYDRM 112
Query: 168 QTLVSGLQILKKSYVASDHVSK-ILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVH 226
LV+ ++ L + + V K +LR R V+ I E KD L++ D++ + H
Sbjct: 113 MILVNKIKGLGSEDMTNHFVVKRLLREFGPRNPTLVSMIREKKDFKRLTLSDILGRIVSH 172
Query: 227 EMSLNEHETSKKSKSIALPSKGKISKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKL 286
EM + E ++K++ + K +K + G D+D+
Sbjct: 173 EM---QEEEARKTR-----------RRVKRFKHFLRKSGYGKGRKDDDK----------- 207
Query: 287 EYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNS 346
KK+ ++ CFNC + GHFIAD P + K KG KK
Sbjct: 208 -------------------GKKQSKRACFNCGEYGHFIADFPKSNEAKAKGGKKKPE--- 245
Query: 347 SKFRKQIKKSLM-ATWEDLDSESGSDKEEADDDAKA-AVGLVATVSSEAVSEAE------ 398
R + ++ M W D E K + K G VATV+ ++ S ++
Sbjct: 246 ---RAHVAEAHMPEVWYSGDEEDPEVKPKPKPKDKVDGEGGVATVTFKSSSSSKERLFNN 302
Query: 399 -SDSEDENEVYS-------KIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKS 450
SD +D++ YS K+ Q+ + ++ S E NEL D+ + + Q +
Sbjct: 303 LSDDDDDSYHYSCFMAQGRKVMTQKPSHTSLDVDSSDEESDNELDDVLKSFSKPAMQHLA 362
Query: 451 TLLE----LKASEEEL 462
L+ LK E L
Sbjct: 363 KLMRALDTLKKENERL 378
>gb|AAV31277.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1577
Score = 914 bits (2363), Expect = 0.0
Identities = 483/1022 (47%), Positives = 644/1022 (62%), Gaps = 32/1022 (3%)
Query: 648 NDQKPLSIHPKVQGRKSTIG----NSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSK 703
N+Q+ ++ +G+ +G ++ +SI+NV LV L NLLS++Q CD F
Sbjct: 574 NEQEKVTFGDNSKGKVIGLGKIAISNDLSIDNVSLVKSLNFNLLSVAQICDLSLSCAFFP 633
Query: 704 TNCTLVNKDDKSITFNGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRL 763
+ + DKS F G R N+Y ++F+ CL++ W+WH+RL H
Sbjct: 634 QEVIVSSLLDKSCVFKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQ 693
Query: 764 ISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPV 823
+SK SK LV GL ++ + D LC ACQ GK V S +K I+STS+PLELLH+DLF P
Sbjct: 694 LSKFSKRDLVMGLKDVKFEKDKLCSACQAGKQVACSHPTKSIMSTSKPLELLHMDLFDPT 753
Query: 824 NTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHG 883
S+ G+ + LVIVDDYSR+TWV F+ K ++F F + Q E ++K+RS+ G
Sbjct: 754 TYKSIGGNSHCLVIVDDYSRYTWVFFLHDKSIVADLFKKFAKRAQNEFSCTLVKIRSNIG 813
Query: 884 GEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAE 943
EF+N E +C+ GI HE + +PQQNGVVERKNRTL EMARTM+ E ++ FWAE
Sbjct: 814 SEFKNTNIEDYCDDLGIKHELFATYSPQQNGVVERKNRTLIEMARTMLDEYGVSDSFWAE 873
Query: 944 AVNTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQ 1003
A+NT+C+ NR+Y+ + + T+YE+ GR+PNI+ F GC YI L K ++
Sbjct: 874 AINTACHATNRLYLHRVLKKTSYEVIVGRKPNIAYFRVFGCKCYIHRKGVRLTKFESRCD 933
Query: 1004 RGIFXGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASES 1063
G GY+ +SKAYRVYN VEE+ V+FD+ GS+ ++ + G ++
Sbjct: 934 EGFLLGYASKSKAYRVYNKNKGIVEETADVQFDETN-GSQEGHENLDDVGDEGLMRVMKN 992
Query: 1064 DQPSDSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQVIQPKFKHK 1123
D K EVE P + + E ++ A PS ++ E ++ Q+ P H
Sbjct: 993 MSIGDV-KPIEVEDKPST--STQDEPSTSAMPS-----QAQVEVEEEKAQEPPMPPRIHT 1044
Query: 1124 S---SHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEEL 1180
+ HP + ++G +TRS +S +E K V+EAL D W+ AM EEL
Sbjct: 1045 ALSKDHPIDQVLGDISKGVQTRSRVTSICEHYSFVSCLERKHVDEALCDPDWMNAMHEEL 1104
Query: 1181 NQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTET 1240
F RN VW LV +P N+IGTKWVFRNK +E G V RNKARLVAQG++Q EG+D+ ET
Sbjct: 1105 KNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENGLVVRNKARLVAQGFTQVEGLDFGET 1164
Query: 1241 FAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFEDLKHPDHVY 1300
FAPVARLEAI +LL++A I L+QMDVKSAFLN D K+P+HVY
Sbjct: 1165 FAPVARLEAICILLAFASCFDIKLFQMDVKSAFLN----------------DTKYPNHVY 1208
Query: 1301 KLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFG 1360
KL K+LYGL+QAPRAWY+RL +FL+ DF+ G+VD TLF + + D + QIYVDDIIFG
Sbjct: 1209 KLSKALYGLRQAPRAWYERLRDFLLSKDFKIGKVDITLFTKIIGDDFFVYQIYVDDIIFG 1268
Query: 1361 STNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLED 1420
STN CKEF +M EFEMSM+GEL FFLG+QI Q K G +V QTKY K+LLK+F LED
Sbjct: 1269 STNEVFCKEFGDMMSREFEMSMIGELSFFLGLQIKQLKNGTFVSQTKYIKDLLKRFGLED 1328
Query: 1421 CKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPR 1480
K + TPM L ++ G VD KLYR MIGSLLYLT SRPDI+FSVC+CARFQ+ P+
Sbjct: 1329 AKPIKTPMATNGHLDLDEGGKPVDLKLYRSMIGSLLYLTVSRPDIMFSVCMCARFQAAPK 1388
Query: 1481 ESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGEN 1540
E HL AVKRI RYLK ++ +GL Y K +KL+G+ D DYAG +++RKSTS +CQ LG +
Sbjct: 1389 ECHLVAVKRILRYLKHSSTIGLWYPKGAKFKLVGYSDPDYAGCKVDRKSTSSSCQMLGRS 1448
Query: 1541 LISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICL 1600
L+SW+SK+Q ++A+STAE EY+SA SCC QLLWMK L DY I+ P+ CDN AI +
Sbjct: 1449 LVSWSSKKQNSVALSTAETEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDGAIKI 1508
Query: 1601 SKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVERFEFIKKNL 1660
+ NP+ HSR KHI+I+HHF+R++V K + I I TE Q ADIFTKPL RF ++ L
Sbjct: 1509 ANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNEL 1568
Query: 1661 NM 1662
N+
Sbjct: 1569 NI 1570
Score = 87.8 bits (216), Expect = 3e-15
Identities = 114/464 (24%), Positives = 191/464 (40%), Gaps = 85/464 (18%)
Query: 29 GKAPKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDG--VDDLDLDEEGAAIDRR---I 83
GKAP FNG +S WK M + + + +W I++ G + L E ID R +
Sbjct: 9 GKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVDVGFAITGTPLME----IDHRNLQL 62
Query: 84 HTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL 143
+ A L+ S+ + E+ ++S+ TA ++ L EG+ + K+AK
Sbjct: 63 NAQAMNALFN-----------SLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLH 111
Query: 144 MLVHQYELFRMEDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVT 203
L QYE F M ES+ +MY R +V+ L+ L +Y + K+LR+LP ++ VT
Sbjct: 112 FLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVT 171
Query: 204 AIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSK--GKISKSSKAYKASE 261
+ + D++ ++ L+ + ++M E K S S ++ K + + ++ E
Sbjct: 172 MLINS-DMSRMTPASLLGKINTNDM---RKERGKGSNSNRRRNRRPNKTLSNLRCFECGE 227
Query: 262 S---EEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCK 318
+ P D D D+S K K G YK KK ++G K
Sbjct: 228 KGHFASKCPSKDDDGDKSSK-------------------KKSGGYKLMKKLKKEG----K 264
Query: 319 KPGHFIADCPDLQKEK-FKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADD 377
K FI + ++ G KK + R++ W L S
Sbjct: 265 KIEAFIEEWDSNEESSPHPGPRKKMVMMQAPGRRR--------WPLLPSR---------- 306
Query: 378 DAKAAVGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDL 437
+ + VS + +ESD + ++ Y ELV +EL + E + L
Sbjct: 307 --RLHHSSLHFVSWQKAPLSESDDDCDDVSY-----DELVSMFEELHAYSEKEIVKFKAL 359
Query: 438 KEKYVD---LMKQQKSTLLELKASEEELKGF--NLISTTYEDRL 476
K+ + L ++ K++ L S E+LK NL+STT L
Sbjct: 360 KKDHASLEVLYEELKTSHERLTISHEKLKEAHDNLLSTTQHGAL 403
>ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 940
Score = 900 bits (2325), Expect = 0.0
Identities = 464/911 (50%), Positives = 606/911 (65%), Gaps = 24/911 (2%)
Query: 765 SKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVN 824
S+ SK + + GL NI + D +C ACQ GK + + K++++T+RPLELLH+DLFGP+
Sbjct: 34 SQTSKARHILGLTNIQFEKDRVCSACQAGKQIGAHHPVKNVMTTTRPLELLHMDLFGPIA 93
Query: 825 TASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCTQIQYEKELKILKVRSDHGG 884
S+ G+KYGLVIVDD+S +TWV F+ K +F F + Q E +LKI +RSD+
Sbjct: 94 YLSIGGNKYGLVIVDDFSCFTWVFFLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNVK 153
Query: 885 EFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEA 944
EF+N E F ++ GI HEFS+P +PQQNGV ERKNRTL E+ARTM+ E + FWAEA
Sbjct: 154 EFKNTCIESFLDEEGIKHEFSAPYSPQQNGVAERKNRTLIEIARTMLDEYKTSDRFWAEA 213
Query: 945 VNTSCYIQNRIYIRPMXEXTAYELFKGRRPNISNFHQLGCTXYILNTKDYLKKLNAKAQR 1004
VNT C+ NR+Y+ + + T YEL G +PN+S F G YILN K K K
Sbjct: 214 VNTVCHDINRLYLHRLLKKTPYELLTGNKPNVSYFRVFGSKCYILNKKARSSKFAPKVDG 273
Query: 1005 GIFXGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESD 1064
G GY AYRV+N + VE + V FD E + S DS E +
Sbjct: 274 GFLLGYGSNECAYRVFNKTSGIVEIAPDVTFD---------ETNGSQVEQVDSHVLGEEE 324
Query: 1065 QPSDSEKYTEVESCPEAEITPEAESNSEAEPSPKVQNESASEDFQDNTQQ---------- 1114
P ++ K + E A S+++ EP Q S D ++
Sbjct: 325 DPREAIKRLALGDVRPREPQQGASSSTQVEPPTSTQANDPSTSSLDQGEEGEQVPPSSIN 384
Query: 1115 VIQPKFKHKS---SHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDG 1171
+ P+ H+S HP + I+G + TRSH +S +EP VEEAL+D
Sbjct: 385 LAHPRI-HQSIQRDHPTDNILGDINKGVSTRSHIANFCEHYSFVSSLEPLRVEEALNDPD 443
Query: 1172 WILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQ 1231
W++AMQEELN F RN+VW LV + S++N+IGTKW+FRNK +E G V RNKARLVAQG++Q
Sbjct: 444 WVMAMQEELNNFTRNEVWTLVER-SRQNVIGTKWIFRNKQDEAGVVIRNKARLVAQGFTQ 502
Query: 1232 QEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVVEEEVYVKQPPGFE 1291
EG+D+ ETFAPVARLE+IR+LL++A N LYQMDVKSAFLNG++ E VYV+QPPGF+
Sbjct: 503 IEGLDFGETFAPVARLESIRILLTFATNLNFKLYQMDVKSAFLNGLINELVYVEQPPGFK 562
Query: 1292 DLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQ 1351
D K+P+HVYKL K+LY LKQAPRAWY+ L NFL+KN FE G+ D+TLF + DI + Q
Sbjct: 563 DPKYPNHVYKLHKALYELKQAPRAWYECLRNFLVKNGFEIGKADSTLFTKRHDNDIFVCQ 622
Query: 1352 IYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKE 1411
IYVDDIIFGSTN S +EFS++M FEMSMMGELKFFLG+QI Q KEG ++ QTKY K+
Sbjct: 623 IYVDDIIFGSTNKSFSEEFSRMMTKRFEMSMMGELKFFLGLQIKQLKEGTFICQTKYLKD 682
Query: 1412 LLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCL 1471
+LKKF +E+ K ++TPM L + G VDQK+YR +IGSLLYL ASRPDI+ SVC+
Sbjct: 683 MLKKFGMENAKPIHTPMPSNGHLDLNEQGKDVDQKVYRSIIGSLLYLCASRPDIMLSVCM 742
Query: 1472 CARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTS 1531
CARFQ+ P+E HL AVKRI RYL T NLGL Y K + LIG+ DADYAG +++RKSTS
Sbjct: 743 CARFQAAPKECHLVAVKRILRYLVHTPNLGLWYPKGARFDLIGYADADYAGCKVDRKSTS 802
Query: 1532 GNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIY 1591
G CQFLG +L+SW+SK+Q ++A+STAEAEYIS SCC QL+WMK L DY +N + IP+
Sbjct: 803 GTCQFLGRSLVSWSSKKQNSVALSTAEAEYISTGSCCAQLIWMKQTLRDYGLNVSKIPLL 862
Query: 1592 CDNTAAICLSKNPILHSRAKHIEIKHHFIRNYVQKGILDIQFIDTEHQWADIFTKPLSVE 1651
CDN +AI ++ NP+ HSR KHI+I+HHF+R++ +G +DIQ + + Q ADIFTKPL
Sbjct: 863 CDNESAIKIANNPVQHSRTKHIDIRHHFLRDHSTRGDIDIQHVRIDKQLADIFTKPLDEA 922
Query: 1652 RFEFIKKNLNM 1662
RF ++ LN+
Sbjct: 923 RFCELRSELNI 933
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,741,482,814
Number of Sequences: 2540612
Number of extensions: 117692869
Number of successful extensions: 442198
Number of sequences better than 10.0: 7140
Number of HSP's better than 10.0 without gapping: 3558
Number of HSP's successfully gapped in prelim test: 3762
Number of HSP's that attempted gapping in prelim test: 400969
Number of HSP's gapped (non-prelim): 28743
length of query: 1667
length of database: 863,360,394
effective HSP length: 142
effective length of query: 1525
effective length of database: 502,593,490
effective search space: 766455072250
effective search space used: 766455072250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)
Medicago: description of AC134322.6