BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130801.11 - phase: 0
(275 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS55772.2| hypothetical protein [Oryza sativa (japonica cult... 107 4e-22
dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica ... 104 2e-21
emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa (japonica cultiva... 100 4e-20
gb|AAX96297.1| retrotransposon protein, putative, unclassified [... 89 1e-16
ref|XP_479426.1| cyst nematode resistance protein-like protein [... 86 1e-15
gb|AAP52238.1| putative retroelement [Oryza sativa (japonica cul... 85 3e-15
gb|AAX95804.1| retrotransposon protein, putative, unclassified [... 81 3e-14
gb|AAX95598.1| hypothetical protein [Oryza sativa (japonica cult... 81 4e-14
ref|XP_471624.1| OSJNBa0029L02.10 [Oryza sativa (japonica cultiv... 80 8e-14
ref|XP_550075.1| hypothetical protein [Oryza sativa (japonica cu... 79 1e-13
gb|AAP53704.1| contains similarity to non-LTR reverse transcript... 77 5e-13
ref|NP_912382.1| hypothetical protein [Oryza sativa (japonica cu... 75 2e-12
gb|AAU44186.1| putative polyprotein [Oryza sativa (japonica cult... 75 2e-12
ref|XP_472472.1| OSJNBa0028I23.15 [Oryza sativa (japonica cultiv... 75 3e-12
emb|CAD41563.3| OSJNBa0006A01.18 [Oryza sativa (japonica cultiva... 75 3e-12
emb|CAE05716.2| OSJNBb0065J09.12 [Oryza sativa (japonica cultiva... 75 3e-12
ref|NP_917609.1| putative cyst nematode resistance protein [Oryz... 74 3e-12
dbj|BAD52836.1| rust resistance protein Rp1-dp8-like [Oryza sati... 74 3e-12
emb|CAI44611.1| P0650D04.15 [Oryza sativa (japonica cultivar-gro... 72 1e-11
gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor] 72 1e-11
>gb|AAS55772.2| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 493
Score = 107 bits (267), Expect = 4e-22
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 21/273 (7%)
Query: 4 FGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVA-----NMLPLRLS 58
F S +G+G+ + FW W G+PL+E +P L+ LA K +VA N ++
Sbjct: 220 FRASTTITLGNGNKSKFWHDRWLNGSPLKELYPSLYQLATRKNRSVAQEIQGNHWLKQMR 279
Query: 59 RGGEGWSWRRWLWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLT 118
R R ++ W +I E + + D + +W W PN G YS AY +
Sbjct: 280 RMNTTTQVREFILLWHQIQQVELQEGI-------DDAIAWRWTPN--GSYSANSAYRIQF 330
Query: 119 ATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCG- 177
G I D+ D W +V K F W ++ ++ T L RG D + CG
Sbjct: 331 VGG--IQDNRSDFFWKAKVENKCKFFGWLMIHRKILTADKLQLRG---WDNSHICPLCGV 385
Query: 178 SIETSDHLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQF-TCLSGFAKARRSFLQ 236
ET+ HL + C F ++W Q+ L G + V S + + TC AK +R
Sbjct: 386 EPETATHLLMECAFAKQVWRQIWLKAGLHMPVASTFDGDMLRWWSTCRREMAKEQRRNFD 445
Query: 237 LIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKI 269
+++ T W IW +RN R+F + +++D I
Sbjct: 446 GLFICTAWGIWLQRNARIFNGTYSTVMQVVDSI 478
>dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1197
Score = 104 bits (260), Expect = 2e-21
Identities = 78/253 (30%), Positives = 116/253 (45%), Gaps = 38/253 (15%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPL--------RLSRGGEG 63
+GDGS T FW W G L QF LF + D TV +L RLS +
Sbjct: 926 IGDGSRTSFWHDRWTGNMTLAAQFESLFSHSTDDLATVEQILSFGIYDILTPRLSSAAQN 985
Query: 64 WSWRRWLWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGNS 123
L+E +T+L + SL T+ SD+ L N +G + + Y++ + G
Sbjct: 986 -------------DLQELQTILQNFSL-TNESDTR--LNNRLGNLTTKTIYDLRSPPG-- 1027
Query: 124 ITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETSD 183
IW ++PLK+ +FAW L+RDRLST+ NL + I+Q TA C + ET+D
Sbjct: 1028 FPSPNWKFIWDCRMPLKIKLFAWLLVRDRLSTKLNLLKKKIVQ--TATCDICSTTDETAD 1085
Query: 184 HLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQFTCLSGFAKARRSFLQLIWLLTT 243
HL +CPF W+ L + I N + L A Q ++L
Sbjct: 1086 HLSFNCPFAISFWQALHI----------QPIINETKYLSQLKAPATIPTRHFQSFFMLCF 1135
Query: 244 WVIWSERNNRLFK 256
WV+W+ R++ +F+
Sbjct: 1136 WVLWNHRHDVVFR 1148
>emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa (japonica cultivar-group)]
gi|21741977|emb|CAD41785.1| OSJNBa0035M09.1 [Oryza
sativa (japonica cultivar-group)]
gi|50928543|ref|XP_473799.1| OSJNBb0015N08.11 [Oryza
sativa (japonica cultivar-group)]
Length = 1026
Score = 100 bits (249), Expect = 4e-20
Identities = 72/261 (27%), Positives = 112/261 (42%), Gaps = 32/261 (12%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVAN--------MLPLRLSRGGEG 63
VG+G TLFW W GG PL QFP L+ + + K T+A+ M R G +
Sbjct: 731 VGNGEKTLFWEDSWLGGKPLAIQFPSLYGIVITKRITIADLNRKGIDCMKFRRDLHGDKL 790
Query: 64 WSWRRWLWAWEEI-VLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGN 122
WR+ + +WE + ++E C+ D W + G ++VR Y L
Sbjct: 791 RDWRKIVNSWEGLNLVENCK-------------DKLWWTLSKDGKFTVRSFYRALKLQQT 837
Query: 123 SITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETS 182
S + IW +VPLK+ IF W ++++ T+ NL RG + D C +ET
Sbjct: 838 SFPNKK---IWKFRVPLKIRIFIWFFTKNKILTKDNLLKRGWRKGDNK--CQFCDKVETV 892
Query: 183 DHLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQFTCLSGFAKARRSFLQLIWLLT 242
HLF CP +W I C + V ++S + + + K ++ + +
Sbjct: 893 QHLFFDCPLARLIWN----IIACALNV-KPVLSRQDLFGSWIQSMDKFTKNLVIVGIAAV 947
Query: 243 TWVIWSERNNRLFKNVVTEAP 263
W IW RN F+ + P
Sbjct: 948 LWSIWKCRNKACFERKLPNDP 968
>gb|AAX96297.1| retrotransposon protein, putative, unclassified [Oryza sativa
(japonica cultivar-group)]
Length = 281
Score = 89.0 bits (219), Expect = 1e-16
Identities = 67/260 (25%), Positives = 105/260 (39%), Gaps = 32/260 (12%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLP-----LRLSR---GGEG 63
+G+G TLFW W GG PL EQFP L+++ + K+ TVA + ++ +R GG
Sbjct: 37 IGNGEKTLFWEDSWIGGKPLNEQFPNLYNITLTKHITVAKLKQKGINCIKFTRDLSGGRL 96
Query: 64 WSWRRWLWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGNS 123
W + +W ++ L++ L +L D +V Y+ L
Sbjct: 97 RDWHKICTSWGDVQLKDNCNNKLRWNLTKD--------------GTVNSFYKALKLQQVH 142
Query: 124 ITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETSD 183
IW + PLK+ +F W ++R+ T+ NL RG + D + C ET
Sbjct: 143 FPQKK---IWKFRTPLKIKVFLWLFTKNRILTKDNLYKRGWRKGDKKCQL--CDREETVQ 197
Query: 184 HLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQFTCLSGFAKARRSFLQLIWLLTT 243
HLF P +W + +DS I + L K + + +
Sbjct: 198 HLFFDRPLARLMWNTAICVLNLNPALDSQNIFGDW-----LEKLDKNMKDLVMVGMAAII 252
Query: 244 WVIWSERNNRLFKNVVTEAP 263
W IW RN F+ V + P
Sbjct: 253 WAIWKSRNKACFEKVYPKDP 272
>ref|XP_479426.1| cyst nematode resistance protein-like protein [Oryza sativa
(japonica cultivar-group)] gi|50510233|dbj|BAD31431.1|
cyst nematode resistance protein-like protein [Oryza
sativa (japonica cultivar-group)]
gi|22296318|dbj|BAC10089.1| cyst nematode resistance
protein-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 210
Score = 85.9 bits (211), Expect = 1e-15
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 100 WLPNPIGGYSVRGAYEVLTATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNL 159
W P P G +SV AY++ S IW P +V F W R R T NL
Sbjct: 25 WKPGPDGAFSVSSAYDMFFMARQSYPFG--QHIWQTNAPSRVRFFFWLAARGRCQTADNL 82
Query: 160 ASRGILQLDT-ALCVTGCGSIETSDHLFLSCPFFAELWEQLRLWIGCCVGV----DSNII 214
A +G D+ ALC+ E HLF++C F +WE +R WI + D ++I
Sbjct: 83 AKKGWPHEDSCALCMR---EQEDCHHLFVTCEFSGRVWELMRAWISVDFPIPGQIDCSLI 139
Query: 215 SNHFVQFTCLSGFAKARRSFLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
F C F R + +L W+IW ERN R+F+ + +L++ IK
Sbjct: 140 DWWFEARRC---FRTGYREIFDAVLMLVCWLIWKERNARIFEQRLRSPEQLVEDIK 192
>gb|AAP52238.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531298|ref|NP_919951.1| putative retroelement
[Oryza sativa (japonica cultivar-group)]
gi|22655797|gb|AAN04214.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 764
Score = 84.7 bits (208), Expect = 3e-15
Identities = 74/273 (27%), Positives = 106/273 (38%), Gaps = 39/273 (14%)
Query: 3 WFGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANM-------LPL 55
W KVG+G T FW W G PL+ Q+P ++ + DK TV+ M + L
Sbjct: 454 WMDLGSSYKVGNGKATNFWSDVWIGETPLKTQYPNIYRMCADKEKTVSQMCLEGDWYIEL 513
Query: 56 RLSRGGEGWS-WRRWLWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAY 114
R S G + W EI L+E R D IW G Y + Y
Sbjct: 514 RRSLGERDLNEWNDLHNTPREIHLKEER-------------DCIIWKLTKNGFYKAKTLY 560
Query: 115 EVLTATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVT 174
+ L+ G + D + +W +PLKV I W +++ R+ L ++ +
Sbjct: 561 QALSFGG--VKDKVMQDLWRSSIPLKVKILFWLMLKGRIQAAGQLKK---MKWSGSPNCK 615
Query: 175 GCGSIETSDHLFLSCPFFAELWEQLRLWIGCC----VGVDSNIISNHFVQFTCLSGFAKA 230
CG E DHL C +W CC G D NI S+ L+
Sbjct: 616 LCGQTEDVDHLMFRCHISQFMW--------CCYRDAFGWD-NIPSSREDLLEKLNIQKDG 666
Query: 231 RRSFLQLIWLLTTWVIWSERNNRLFKNVVTEAP 263
++S L TW IW RN+ +F +T P
Sbjct: 667 QKSVLLACLAAGTWAIWLMRNDWVFNGKLTSDP 699
>gb|AAX95804.1| retrotransposon protein, putative, unclassified [Oryza sativa
(japonica cultivar-group)]
Length = 849
Score = 81.3 bits (199), Expect = 3e-14
Identities = 58/187 (31%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEGW--SWRRW 69
+GDGS T FW W G PL+ +FP ++ + D TV+ + +GW RR
Sbjct: 644 LGDGSATRFWDDVWLGDTPLKIKFPYIYSIVADPGKTVSQLW------SSDGWRIDLRRS 697
Query: 70 LWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGNSITDSAV 129
L A E + E+ L +V L TD D W G +S + Y +T G I D +
Sbjct: 698 LGAEELVEWEQLLADLANVHLSTD-RDRMRWKLTKSGQFSTKSLYREMTFGG--IRDIKM 754
Query: 130 DLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETSDHLFLSC 189
+W +PLK+ IF W +++ R+ L + + LC CG+ E DHL C
Sbjct: 755 QELWKTPMPLKIKIFVWLMLKGRIQAAHQL--KKMKWNGDPLCKL-CGAEEDVDHLMFKC 811
Query: 190 PFFAELW 196
LW
Sbjct: 812 APARFLW 818
>gb|AAX95598.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 1090
Score = 80.9 bits (198), Expect = 4e-14
Identities = 59/202 (29%), Positives = 87/202 (42%), Gaps = 16/202 (7%)
Query: 4 FGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLR-----LS 58
F + R +GDG + W W GG PL+ P LF + K +V+ L L
Sbjct: 802 FAAATRVTLGDGRKAILWESNWIGGQPLKSIAPNLFKHSKRKNRSVSEALTNNAWIGDLR 861
Query: 59 RGGEGWSWRRWLWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLT 118
+G + ++ W+ + E + L D+ W+ G YSV Y V
Sbjct: 862 QGITTQLLQEFVQVWQVLYNAE-------IELHEGEEDTIQWIGTASGSYSVSSTYNV-Q 913
Query: 119 ATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGS 178
G + ++SA DLIW P K FAW L +R+ T L RG + C +
Sbjct: 914 FMGRTKSNSA-DLIWKTWAPGKHKFFAWLLAHNRIWTADRLQCRG--WPNNYFCQLCFRN 970
Query: 179 IETSDHLFLSCPFFAELWEQLR 200
+ET+ HLF CPF ++W + R
Sbjct: 971 LETAQHLFKECPFVQQIWNEAR 992
>ref|XP_471624.1| OSJNBa0029L02.10 [Oryza sativa (japonica cultivar-group)]
gi|39546220|emb|CAE04469.3| OSJNBa0029L02.10 [Oryza
sativa (japonica cultivar-group)]
Length = 389
Score = 79.7 bits (195), Expect = 8e-14
Identities = 66/257 (25%), Positives = 111/257 (42%), Gaps = 28/257 (10%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANML-----PLRLSRGGEGWSW 66
VG+G +TLFW W GG PL EQF L+++ + K TVA++ ++ R G
Sbjct: 15 VGNGRNTLFWEDNWIGGKPLAEQFRDLYNITLTKKITVADVKQVGIDSIKFRRDVLGNKL 74
Query: 67 RRWLWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGNSITD 126
+ +W ++VLE+ D+ W G ++V+ + L
Sbjct: 75 LKIKQSWSDLVLED------------GTRDTLRWNLTKDGKFTVKSFHTALKMQQVIFPH 122
Query: 127 SAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETSDHLF 186
IW +VPLK+ IF W ++++ T+ NL RG + A C C ET LF
Sbjct: 123 KK---IWGLKVPLKIKIFIWMFTKNKILTKDNLFKRG-WRKGKANC-QFCDQTETLQPLF 177
Query: 187 LSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQFTCLSGFAKARRSFLQLIWLLTTWVI 246
CP LW ++ C + ++S +++ + + ++ K + + + W I
Sbjct: 178 Y-CPLARLLWNIVK----CALNINS-VLNRQDLFGSWMNKIDKFTKKLVVVGLAAIIWTI 231
Query: 247 WSERNNRLFKNVVTEAP 263
W RN F+ + P
Sbjct: 232 WKFRNKACFEKKLPADP 248
>ref|XP_550075.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|54290304|dbj|BAD61304.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 385
Score = 79.0 bits (193), Expect = 1e-13
Identities = 70/274 (25%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEGWSWRRWL- 70
VGDG+ FW W G L++ P ++ + K +T L + W + L
Sbjct: 113 VGDGTKVSFWDSGWLQGRRLKDVAPLVYAASKKKTST--------LQQASLSDQWMQDLD 164
Query: 71 ------WAWEEI-VLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAY--EVLTATG 121
W+ E I L E +++ ++ L D W G Y+ AY ++L T
Sbjct: 165 LPENTGWSIELIDQLIEVWSVVQNLHLIEHEEDKITWKLTSHGEYTTTSAYKAQLLGTTA 224
Query: 122 NSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIET 181
+ + LIW P K FAW ++++R+ T + LA+RG + ++C ET
Sbjct: 225 TNFNN----LIWKPWAPHKCKTFAWLIIQNRVWTSNRLATRG--WPNGSICPLCRHRQET 278
Query: 182 SDHLFLSCPFFAELWEQLRLWIGC-----CVGVDSNIISNHFVQFTCLSGFAKARRSFLQ 236
+ HL C + +W + W C + ++ +S + + A + L+
Sbjct: 279 AIHLLAECRYTRRIWGAIAEWTACEQLNPSLWHQASTVSEWW---EATANTKDAPKKALR 335
Query: 237 LIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
+ LL W IW+ERN R F+ LL KIK
Sbjct: 336 TLTLLVAWEIWNERNRRTFQQKELSMGSLLAKIK 369
>gb|AAP53704.1| contains similarity to non-LTR reverse transcriptase [Oryza sativa
(japonica cultivar-group)] gi|37534230|ref|NP_921417.1|
contains similarity to non-LTR reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
Length = 379
Score = 77.0 bits (188), Expect = 5e-13
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 11 KVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEGWSWRRWL 70
+VGDG+ T FW W L F L+ A++K TV N++ L S L
Sbjct: 153 QVGDGARTSFWHDCWISKPALANVFMPLYTHALNKDDTVRNVMQRGLVS-----SLVPRL 207
Query: 71 WAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGNSITDSAVD 130
+ L+ + L +L + D + + + YE G I D
Sbjct: 208 TVTANLELQRLQAALQSFTLSNE-PDKRTYGTKAAPNVTCKQFYEARLLPG--IVSPLWD 264
Query: 131 LIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETSDHLFLSCP 190
IW + PLKV FAW L++DRLST+ NL + I+ D +C G+ ET+ HL CP
Sbjct: 265 AIWKCKAPLKVKFFAWLLVKDRLSTKKNLHKKTIVPND--ICDICNGATETASHLCFFCP 322
Query: 191 FFAELWEQL 199
F W+++
Sbjct: 323 FAKSFWDKI 331
>ref|NP_912382.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|29893670|gb|AAP06924.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 1143
Score = 75.5 bits (184), Expect = 2e-12
Identities = 69/277 (24%), Positives = 111/277 (39%), Gaps = 22/277 (7%)
Query: 4 FGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEG 63
F S + VGDG+ T FW W G ++ P +++++ ++ + LR + +
Sbjct: 857 FAASTKITVGDGNTTRFWDSAWINGQRPKDLMPLVYEISKNRKKS------LRQGKEDDS 910
Query: 64 WSWRRWLWAWEEIVLEECRTLLL------DVSLFTDISDSWIWLPNPIGGYSVRGAY--E 115
W L A I + L+ +V L ++ D +W G Y+ AY +
Sbjct: 911 WVHDLTLDAGSSITINLLDQLVRLWEAVRNVHLDSEEPDQIVWKFTSSGHYTASSAYHAQ 970
Query: 116 VLTATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTG 175
L A + LIW P K AW ++++R+ T LA+RG + C
Sbjct: 971 CLGAPNTNFNS----LIWKVWAPGKCKFHAWLIIQNRVWTSDRLATRG--WRNNGHCPLC 1024
Query: 176 CGSIETSDHLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQ--FTCLSGFAKARRS 233
ET+ HL C + +W + W G + V + L+ +
Sbjct: 1025 RCDTETALHLVAMCRYTKRIWRLVATWAGYQQFEPAQWEEARSVHQWWESLANTPGIPKK 1084
Query: 234 FLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
L+ + LL W IW ERN R+F + LL KIK
Sbjct: 1085 GLRSLILLVVWEIWKERNRRIFDHKEMATGVLLAKIK 1121
>gb|AAU44186.1| putative polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 1023
Score = 75.5 bits (184), Expect = 2e-12
Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 28/280 (10%)
Query: 4 FGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEG 63
F S + VGDG+ T FW W G ++ P +++++ ++ + LR + +
Sbjct: 737 FAASTKITVGDGNTTRFWDSAWINGRRPKDLMPLVYEISKNRKKS------LRQGKEDDS 790
Query: 64 WSWRRWLWAWEEIVLEECRTLLL------DVSLFTDISDSWIWLPNPIGGYSVRGAY--E 115
W L A I + L+ +V L ++ D +W G Y+ AY +
Sbjct: 791 WVHDLTLDAGSSITINLLDQLVRLWEAVRNVHLDSEEPDQIVWKFTSSGHYTASSAYHAQ 850
Query: 116 VLTATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTG 175
L A + LIW P K AW ++++R+ T LA+RG + C
Sbjct: 851 CLGAPNTNFNS----LIWKVWAPGKCKFHAWLIIQNRVWTSDRLATRG--WRNNGHCPLC 904
Query: 176 CGSIETSDHLFLSCPFFAELWEQLRLWIGC-----CVGVDSNIISNHFVQFTCLSGFAKA 230
ET+ HL C + +W + W G ++ + + G K
Sbjct: 905 RCDTETALHLVAMCRYTKRIWRLVATWAGYQQLEPAQWEEARSVHQWWESLANTPGIPKK 964
Query: 231 RRSFLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
L+ + LL W IW ERN R+F + LL KIK
Sbjct: 965 G---LRSLILLVVWEIWKERNRRIFDHKEMATGVLLAKIK 1001
>ref|XP_472472.1| OSJNBa0028I23.15 [Oryza sativa (japonica cultivar-group)]
gi|39546208|emb|CAE04633.3| OSJNBa0028I23.15 [Oryza
sativa (japonica cultivar-group)]
Length = 593
Score = 74.7 bits (182), Expect = 3e-12
Identities = 68/218 (31%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
Query: 11 KVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANML---PLRLSRGGEGWSWR 67
K+ DG FW W G L + +P L++L +K VA +L PL +S +R
Sbjct: 368 KLQDGLQIRFWEDCWLGNQSLEKIYPSLYNLVRNKNVVVAKVLERVPLNVS-------FR 420
Query: 68 RW-----LWAWEEIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGN 122
R L AW EIV ++D++L D + W + G ++V Y+ L GN
Sbjct: 421 RAIIGDNLKAWHEIVAN-----VVDINLRGQ-KDRFTWDASKNGTFTVNSMYKKLMF-GN 473
Query: 123 SITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIETS 182
I + IW ++PLK+ IF W L + T+ NLA R + +L C S ET
Sbjct: 474 VIPRQS--FIWKLRLPLKIKIFLWYLKEGVILTKDNLAKR---RWKGSLRCCFCRSHETI 528
Query: 183 DHLFLSCP---FFAELWEQLRLWIGCCVGVDSNIISNH 217
+LF CP F W RLW D N++ N+
Sbjct: 529 QYLFFDCPMVIFRGTHW--ARLWSLLLKEEDGNMLKNY 564
>emb|CAD41563.3| OSJNBa0006A01.18 [Oryza sativa (japonica cultivar-group)]
Length = 1189
Score = 74.7 bits (182), Expect = 3e-12
Identities = 69/280 (24%), Positives = 111/280 (39%), Gaps = 28/280 (10%)
Query: 4 FGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEG 63
F S + VGDG+ T FW W G ++ P +++++ ++ + LR + +
Sbjct: 903 FAASTKITVGDGNTTRFWDSAWINGRRPKDLMPLVYEISKNRKKS------LRQGKEDDS 956
Query: 64 WSWRRWLWAWEEIVLEECRTLLL------DVSLFTDISDSWIWLPNPIGGYSVRGAY--E 115
W L A I + L+ +V L ++ D +W G Y+ AY +
Sbjct: 957 WVHDLTLDAGLSITINLLDQLVRLWEAVRNVHLDSEEPDQIVWKFTSSGHYTASSAYHAQ 1016
Query: 116 VLTATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTG 175
L A + LIW P K AW ++++R+ T LA+RG + C
Sbjct: 1017 CLGAPNTNFNS----LIWKVWAPGKCKFHAWLIIQNRVWTSDRLATRG--WRNNGHCPLC 1070
Query: 176 CGSIETSDHLFLSCPFFAELWEQLRLWIGC-----CVGVDSNIISNHFVQFTCLSGFAKA 230
ET+ HL C + +W + W G ++ + + G K
Sbjct: 1071 RCDTETAFHLVAMCRYTKRIWRLVATWAGYQQLEPAQWEEARSVHQWWESLANTPGIPKK 1130
Query: 231 RRSFLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
L+ + LL W IW ERN R+F + LL KIK
Sbjct: 1131 G---LRSLILLVVWEIWKERNRRIFDHKEMATGVLLAKIK 1167
>emb|CAE05716.2| OSJNBb0065J09.12 [Oryza sativa (japonica cultivar-group)]
Length = 436
Score = 74.7 bits (182), Expect = 3e-12
Identities = 68/285 (23%), Positives = 114/285 (39%), Gaps = 38/285 (13%)
Query: 4 FGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEG 63
F S + VGDG+ T FW W G ++ P ++ ++ ++ + L +G E
Sbjct: 150 FAASTKITVGDGNMTRFWDSTWIDGRRPKDLMPLVYAISKNRKKS--------LHQGKED 201
Query: 64 WSWRRWLWAWEEIVLEECRTLLLD--------------VSLFTDISDSWIWLPNPIGGYS 109
+W ++++ + T+ ++ V L ++ D +W G Y+
Sbjct: 202 DTWV------DDLIFDAGSTITVNLVEQLVRLWEAVRNVQLVSEEPDQIVWKFTGNGHYT 255
Query: 110 VRGAY--EVLTATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQL 167
AY + L A ++ LIW P K + W ++++R+ T LA RG
Sbjct: 256 ASSAYHAQCLEAPSTNLNS----LIWKAWAPGKCKFYVWLIIQNRVWTSDRLAIRG--WQ 309
Query: 168 DTALCVTGCGSIETSDHLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFV--QFTCLS 225
+ C ET HL +C + +W + W+G S V + L+
Sbjct: 310 NNGHCPLCRCEAETGLHLVATCRYTKRIWHHVAGWVGYHQLEPSQWEEAQSVCQWWESLA 369
Query: 226 GFAKARRSFLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
+ L+ + LL W IW ERN R+F N LL KIK
Sbjct: 370 NTPNIPKKGLRSLILLVVWEIWKERNRRIFDNKEMAVGLLLAKIK 414
>ref|NP_917609.1| putative cyst nematode resistance protein [Oryza sativa (japonica
cultivar-group)]
Length = 1414
Score = 74.3 bits (181), Expect = 3e-12
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEGWSWRRWL- 70
+G+G+ FW W +++ P ++ ++ K +T+ + L +WL
Sbjct: 1156 IGNGATVSFWESAWWQERRMKDVAPLVYAVSKKKNSTLQHALQSD-----------QWLL 1204
Query: 71 ---------WAWEEI-VLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAY--EVLT 118
W E I L T + + L D W G Y+ AY ++L
Sbjct: 1205 DLGFPADVGWTTELIDQLVTVWTAIQTIELTEHEDDQISWKLTSHGQYTATSAYNAQLLG 1264
Query: 119 ATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGS 178
T N+ LIW K FAW ++++R+ T L++RG + ++C
Sbjct: 1265 TTANN-------LIWKPWALRKCKTFAWLVIQNRVWTSDRLSTRG--WPNGSICPLCRRV 1315
Query: 179 IETSDHLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQFTCL-------SGFAKAR 231
ET+ HL C + +W L W C +NI NH+ Q + + + +A
Sbjct: 1316 QETALHLLAGCRYTKRIWATLAEWTAC-----NNIHPNHWWQVSSVLEWWDQTTSVKEAP 1370
Query: 232 RSFLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
+ L+ + L W IW+ERN R F++ LL KIK
Sbjct: 1371 KKALRSLTFLVVWEIWNERNRRTFQHKELPPSGLLTKIK 1409
>dbj|BAD52836.1| rust resistance protein Rp1-dp8-like [Oryza sativa (japonica
cultivar-group)]
Length = 1374
Score = 74.3 bits (181), Expect = 3e-12
Identities = 69/279 (24%), Positives = 114/279 (40%), Gaps = 45/279 (16%)
Query: 12 VGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEGWSWRRWL- 70
+G+G+ FW W +++ P ++ ++ K +T+ + L +WL
Sbjct: 1116 IGNGATVSFWESAWWQERRMKDVAPLVYAVSKKKNSTLQHALQSD-----------QWLL 1164
Query: 71 ---------WAWEEI-VLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAY--EVLT 118
W E I L T + + L D W G Y+ AY ++L
Sbjct: 1165 DLGFPADVGWTTELIDQLVTVWTAIQTIELTEHEDDQISWKLTSHGQYTATSAYNAQLLG 1224
Query: 119 ATGNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGS 178
T N+ LIW K FAW ++++R+ T L++RG + ++C
Sbjct: 1225 TTANN-------LIWKPWALRKCKTFAWLVIQNRVWTSDRLSTRG--WPNGSICPLCRRV 1275
Query: 179 IETSDHLFLSCPFFAELWEQLRLWIGCCVGVDSNIISNHFVQFTCL-------SGFAKAR 231
ET+ HL C + +W L W C +NI NH+ Q + + + +A
Sbjct: 1276 QETALHLLAGCRYTKRIWATLAEWTAC-----NNIHPNHWWQVSSVLEWWDQTTSVKEAP 1330
Query: 232 RSFLQLIWLLTTWVIWSERNNRLFKNVVTEAPRLLDKIK 270
+ L+ + L W IW+ERN R F++ LL KIK
Sbjct: 1331 KKALRSLTFLVVWEIWNERNRRTFQHKELPPSGLLTKIK 1369
>emb|CAI44611.1| P0650D04.15 [Oryza sativa (japonica cultivar-group)]
Length = 1579
Score = 72.4 bits (176), Expect = 1e-11
Identities = 68/268 (25%), Positives = 108/268 (39%), Gaps = 29/268 (10%)
Query: 3 WFGDSVRRKVGDGSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGE 62
W +G+G FW W G PL FP A+ + +L ++ +GG
Sbjct: 1286 WMMLGAEWSIGNGLSVKFWKDTWFGNCPLMTLFP-----AIYRVCNQQEILVSQVGQGGP 1340
Query: 63 GWSWRRWLWAWEEIVLEECRTL--LLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTAT 120
G R + EE LEE L ++D + +D D W N Y+ R Y LT
Sbjct: 1341 GCLSFRRSFGPEE--LEEWNDLKEIIDQIVLSDTHDKLNWGLNANKKYTTRSLYRALTFR 1398
Query: 121 GNSITDSAVDLIWHHQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGCGSIE 180
G ++ +W P+K F +RDR+ + L + + C CG +E
Sbjct: 1399 GIGDVNAK---MWGCPCPMKHKHFLSLALRDRIQSAEQLKKKN--WEGSEFCQL-CGELE 1452
Query: 181 TSDHLFLSCPFFAELWEQLRLWIGCCVGVDS---NIISNHFVQFTCLSGFAKARRSFLQL 237
T++H+ +CP +W CV D+ N I + +F + A S
Sbjct: 1453 TTNHILFNCPMARFVW---------CVCRDTLRWNFIPRNSDEFFLMCDGAPDLCSVRIT 1503
Query: 238 IWLLTT--WVIWSERNNRLFKNVVTEAP 263
+ LL W +W RNN +F++ + +P
Sbjct: 1504 LSLLAAVCWNLWITRNNMIFRDKLVYSP 1531
>gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]
Length = 1998
Score = 72.4 bits (176), Expect = 1e-11
Identities = 73/263 (27%), Positives = 107/263 (39%), Gaps = 24/263 (9%)
Query: 15 GSDTLFWFHWWCGGAPLREQFPRLFDLAVDKYTTVANMLPLRLSRGGEGWSWRRWLWAWE 74
G +FW W G LR + P LF K+ + A +L G E ++ R
Sbjct: 1737 GESIVFWQDKW-GMQKLRLEMPELFSFVQHKFLSAAEVL------GQEDFT-RLLQLPIS 1788
Query: 75 EIVLEECRTLLLDVSLFTDISDSWIWLPNPIGGYSVRGAYEVLTATGNSITDSAVDLIWH 134
E + + L + + W +S AY L G+ IW
Sbjct: 1789 ETAFHQLQQLTTRIDNLERTQEQDQWKYKWGNNFSATKAYSELM--GHQQIHEVHKWIWK 1846
Query: 135 HQVPLKVSIFAWRLMRDRLSTRSNLASRGILQLDTALCVTGC-GSIETSDHLFLSCPFFA 193
K +F W L++DRLST N+ R +QL + CV S ET+ HLFL C +
Sbjct: 1847 SFCQPKHKVFFWLLIKDRLST-CNILKRKNMQLQSYNCVLCLQNSEETTSHLFLHCAYAR 1905
Query: 194 ELWEQLRLWIGCCVGVDSNIISNHFVQFTCLSGFAKARRSFLQLIWLLTTWVIWSERNNR 253
+ W+ L + I D I++HF GF F + +L W IWS RNN
Sbjct: 1906 QCWQLLDMDIP--PNSDFPEITDHFKH-----GF---NNQFFMVTTILLCWAIWSTRNNL 1955
Query: 254 LFKNV--VTEAPRLLDKIKLLSL 274
+F+ + E + + K +LL L
Sbjct: 1956 IFRGIQPTIEGTKEIFKRELLLL 1978
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.326 0.140 0.483
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 514,336,968
Number of Sequences: 2540612
Number of extensions: 20989039
Number of successful extensions: 58006
Number of sequences better than 10.0: 270
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 57497
Number of HSP's gapped (non-prelim): 320
length of query: 275
length of database: 863,360,394
effective HSP length: 126
effective length of query: 149
effective length of database: 543,243,282
effective search space: 80943249018
effective search space used: 80943249018
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 74 (33.1 bits)
Medicago: description of AC130801.11