BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130200.5 - phase: 0
(312 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42669.1| unknown protein [Arabidopsis thaliana] gi|289508... 385 e-106
dbj|BAB09438.1| unnamed protein product [Arabidopsis thaliana] 385 e-106
gb|AAU43934.1| unknown protein [Oryza sativa (japonica cultivar-... 371 e-101
gb|AAC72543.1| unknown [Oryza sativa] 369 e-101
gb|AAP42722.1| At1g04770 [Arabidopsis thaliana] gi|22655080|gb|A... 325 1e-87
gb|AAF40459.1| Strong similarity to the beta-9 tubulin gene (178... 325 1e-87
dbj|BAD34381.1| putative pollenless3 [Oryza sativa (japonica cul... 288 2e-76
emb|CAB62650.1| MS5-like protein [Arabidopsis thaliana] gi|30102... 275 9e-73
gb|AAC97106.1| pollenless3 [Arabidopsis thaliana] 253 4e-66
gb|AAC72541.1| male sterility MS5 [Arabidopsis thaliana] 253 4e-66
emb|CAB79090.1| putative protein [Arabidopsis thaliana] gi|52627... 243 5e-63
ref|XP_479930.1| putative pollenless3 [Oryza sativa (japonica cu... 223 7e-57
dbj|BAB10118.1| male sterility MS5; pollenless3 [Arabidopsis tha... 213 6e-54
gb|AAC72542.1| MS5-like protein [Arabidopsis thaliana] gi|254557... 122 2e-26
gb|AAT78774.1| hypothetical protein [Oryza sativa (japonica cult... 82 2e-14
gb|AAR87226.1| hypothetical protein [Oryza sativa (japonica cult... 70 1e-10
gb|AAL94055.1| Tetratricopeptide repeat family protein [Fusobact... 48 4e-04
gb|AAU07067.1| surface-located membrane protein 1 [Borrelia gari... 43 0.013
ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat ... 42 0.018
ref|NP_213628.1| cell division protein FtsY [Aquifex aeolicus VF... 42 0.018
>dbj|BAC42669.1| unknown protein [Arabidopsis thaliana] gi|28950875|gb|AAO63361.1|
At5g48850 [Arabidopsis thaliana]
gi|30695554|ref|NP_199696.2| male sterility MS5 family
protein [Arabidopsis thaliana]
Length = 306
Score = 385 bits (989), Expect = e-106
Identities = 190/292 (65%), Positives = 247/292 (84%), Gaps = 7/292 (2%)
Query: 26 KSSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKD 85
KS+ K ++L+HVIHKVP GDTPYV+AKHAQL++K+PE+AIV+FWKAIN GD+VDSALKD
Sbjct: 17 KSNLMKDDELFHVIHKVPCGDTPYVRAKHAQLIEKNPEMAIVWFWKAINTGDRVDSALKD 76
Query: 86 MAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRL 145
MAVVMKQLDR+EEAIEAIKSFR C+K+SQ+SLDNVL+DLYKKCGR+EEQ+ELLKRKLR
Sbjct: 77 MAVVMKQLDRSEEAIEAIKSFRPRCSKNSQDSLDNVLIDLYKKCGRMEEQVELLKRKLRQ 136
Query: 146 IYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMI 205
IYQGEAFNG+ TKTARSHGKKFQV+++QE +RLLGNLGWAYMQ+ Y+ AE V++KAQM+
Sbjct: 137 IYQGEAFNGKPTKTARSHGKKFQVTVQQEISRLLGNLGWAYMQQAKYLSAEAVYRKAQMV 196
Query: 206 DADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDEIKSRNRAEELLVELSANLPQ 265
+ DANK+ NLA+CL++Q R+EE L+L+ VL+ ++ G+D+ ++R RAEELL EL ++LP+
Sbjct: 197 EPDANKSCNLAMCLIKQGRFEEGRLVLDDVLEYRVLGADDCRTRQRAEELLSELESSLPR 256
Query: 266 ---PKFMDDLG--LDDDLLKGIDGLLNVWSPTRSRRLPIFEEISSFRDQLAC 312
+ D LG LDDD + G++ + + + +S+RLPIFE+ISSFR+ L C
Sbjct: 257 MRDAEMEDVLGNILDDDFVLGLEEMTS--TSFKSKRLPIFEQISSFRNTLVC 306
>dbj|BAB09438.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 385 bits (989), Expect = e-106
Identities = 190/292 (65%), Positives = 247/292 (84%), Gaps = 7/292 (2%)
Query: 26 KSSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKD 85
KS+ K ++L+HVIHKVP GDTPYV+AKHAQL++K+PE+AIV+FWKAIN GD+VDSALKD
Sbjct: 37 KSNLMKDDELFHVIHKVPCGDTPYVRAKHAQLIEKNPEMAIVWFWKAINTGDRVDSALKD 96
Query: 86 MAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRL 145
MAVVMKQLDR+EEAIEAIKSFR C+K+SQ+SLDNVL+DLYKKCGR+EEQ+ELLKRKLR
Sbjct: 97 MAVVMKQLDRSEEAIEAIKSFRPRCSKNSQDSLDNVLIDLYKKCGRMEEQVELLKRKLRQ 156
Query: 146 IYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMI 205
IYQGEAFNG+ TKTARSHGKKFQV+++QE +RLLGNLGWAYMQ+ Y+ AE V++KAQM+
Sbjct: 157 IYQGEAFNGKPTKTARSHGKKFQVTVQQEISRLLGNLGWAYMQQAKYLSAEAVYRKAQMV 216
Query: 206 DADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDEIKSRNRAEELLVELSANLPQ 265
+ DANK+ NLA+CL++Q R+EE L+L+ VL+ ++ G+D+ ++R RAEELL EL ++LP+
Sbjct: 217 EPDANKSCNLAMCLIKQGRFEEGRLVLDDVLEYRVLGADDCRTRQRAEELLSELESSLPR 276
Query: 266 ---PKFMDDLG--LDDDLLKGIDGLLNVWSPTRSRRLPIFEEISSFRDQLAC 312
+ D LG LDDD + G++ + + + +S+RLPIFE+ISSFR+ L C
Sbjct: 277 MRDAEMEDVLGNILDDDFVLGLEEMTS--TSFKSKRLPIFEQISSFRNTLVC 326
>gb|AAU43934.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 299
Score = 371 bits (952), Expect = e-101
Identities = 180/284 (63%), Positives = 239/284 (83%), Gaps = 3/284 (1%)
Query: 31 KKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVM 90
+K+DL+HV+HKVP GD+PYV+AKH QLVDKDPE AIV+FWKAIN+ DKVDSALKDMAVVM
Sbjct: 17 EKKDLFHVVHKVPAGDSPYVRAKHLQLVDKDPETAIVWFWKAINSRDKVDSALKDMAVVM 76
Query: 91 KQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGE 150
KQ DRA+EAIEAI+SFR LC++ +QESLDN+L+DLYKKCG+V+EQI+LLK+KL++IY GE
Sbjct: 77 KQQDRAKEAIEAIRSFRHLCSRQAQESLDNLLIDLYKKCGKVDEQIDLLKQKLKMIYLGE 136
Query: 151 AFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADAN 210
AFNG+ TKTARSHGKKFQVSI+QET+R+LGNLGWAYMQ++NY AE+V++KAQ I+ DAN
Sbjct: 137 AFNGKATKTARSHGKKFQVSIQQETSRILGNLGWAYMQQSNYSAAELVYRKAQSIEPDAN 196
Query: 211 KALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDEIKSRNRAEELLVELS--ANLPQPKF 268
+A NL LCL++QSR++EA +L V+ ++ GS++ K RA++LL EL ++ P
Sbjct: 197 RACNLGLCLIKQSRHDEARQVLHDVVLRRISGSEDDKVVARAKQLLHELEPVTHVTSPN- 255
Query: 269 MDDLGLDDDLLKGIDGLLNVWSPTRSRRLPIFEEISSFRDQLAC 312
L + +++++ +D +LN W+P RSRRLP+FEEI++ RDQ+AC
Sbjct: 256 NAGLSVSEEIMERLDLVLNEWTPFRSRRLPVFEEIATLRDQIAC 299
>gb|AAC72543.1| unknown [Oryza sativa]
Length = 321
Score = 369 bits (947), Expect = e-101
Identities = 179/284 (63%), Positives = 239/284 (84%), Gaps = 3/284 (1%)
Query: 31 KKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVM 90
+K+DL+HV+HKVP G++PYV+AKH QLVDKDPE AIV+FWKAIN+ DKVDSALKDMAVVM
Sbjct: 39 EKKDLFHVVHKVPAGNSPYVRAKHLQLVDKDPETAIVWFWKAINSRDKVDSALKDMAVVM 98
Query: 91 KQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGE 150
KQ DRA+EAIEAI+SFR LC++ +QESLDN+L+DLYKKCG+V+EQI+LLK+KL++IY GE
Sbjct: 99 KQQDRAKEAIEAIRSFRHLCSRQAQESLDNLLIDLYKKCGKVDEQIDLLKQKLKMIYLGE 158
Query: 151 AFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADAN 210
AFNG+ TKTARSHGKKFQVSI+QET+R+LGNLGWAYMQ++NY AE+V++KAQ I+ DAN
Sbjct: 159 AFNGKATKTARSHGKKFQVSIQQETSRILGNLGWAYMQQSNYSAAELVYRKAQSIEPDAN 218
Query: 211 KALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDEIKSRNRAEELLVELS--ANLPQPKF 268
+A NL LCL++QSR++EA +L V+ ++ GS++ K RA++LL EL ++ P
Sbjct: 219 RACNLGLCLIKQSRHDEARQVLHDVVLRRISGSEDDKVVARAKQLLHELEPVTHVTSPN- 277
Query: 269 MDDLGLDDDLLKGIDGLLNVWSPTRSRRLPIFEEISSFRDQLAC 312
L + +++++ +D +LN W+P RSRRLP+FEEI++ RDQ+AC
Sbjct: 278 NAGLSVSEEIMERLDLVLNEWTPFRSRRLPVFEEIATLRDQIAC 321
>gb|AAP42722.1| At1g04770 [Arabidopsis thaliana] gi|22655080|gb|AAM98131.1| unknown
protein [Arabidopsis thaliana]
gi|30678993|ref|NP_171969.2| male sterility MS5 family
protein [Arabidopsis thaliana]
Length = 303
Score = 325 bits (833), Expect = 1e-87
Identities = 168/294 (57%), Positives = 223/294 (75%), Gaps = 11/294 (3%)
Query: 30 GKKED----LYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKD 85
G+++D Y+V+HK+P+GD+PYV+AKH QLV+KD E AI FW AI A D+VDSALKD
Sbjct: 10 GERQDSSAAAYNVVHKLPHGDSPYVRAKHVQLVEKDAEAAIELFWIAIKARDRVDSALKD 69
Query: 86 MAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRL 145
MA++MKQ +RAEEAI+AI+SFR LC++ +QESLDNVL+DLYKKCGR+EEQ+ELLK+KL +
Sbjct: 70 MALLMKQQNRAEEAIDAIQSFRDLCSRQAQESLDNVLIDLYKKCGRIEEQVELLKQKLWM 129
Query: 146 IYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMI 205
IYQGEAFNG+ TKTARSHGKKFQV++++ET+R+LGNLGWAYMQ +Y AE V++KAQ+I
Sbjct: 130 IYQGEAFNGKPTKTARSHGKKFQVTVEKETSRILGNLGWAYMQLMDYTAAEAVYRKAQLI 189
Query: 206 DADANKALNLALCLMRQSRYEEAYLIL-EQVLQGKLPGSDEIKSRNRAEELLVELSANLP 264
+ DANKA NL CL++Q +++EA IL VL GS + + R +ELL EL
Sbjct: 190 EPDANKACNLCTCLIKQGKHDEARSILFRDVLMENKEGSGDPRLMARVQELLSELKPQEE 249
Query: 265 QP----KFMDDLGLDD-DLLKGIDGLLNVW-SPTRSRRLPIFEEISSFRDQLAC 312
+ ++G+D+ +++G+D + W P R+RRLPIFEEI RDQLAC
Sbjct: 250 EAAASVSVECEVGIDEIAVVEGLDEFVKEWRRPYRTRRLPIFEEILPLRDQLAC 303
>gb|AAF40459.1| Strong similarity to the beta-9 tubulin gene (178 gene product)
gb|AF060248. [Arabidopsis thaliana]
gi|25406811|pir||G86180 hypothetical protein [imported]
- Arabidopsis thaliana
Length = 364
Score = 325 bits (833), Expect = 1e-87
Identities = 168/294 (57%), Positives = 223/294 (75%), Gaps = 11/294 (3%)
Query: 30 GKKED----LYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKD 85
G+++D Y+V+HK+P+GD+PYV+AKH QLV+KD E AI FW AI A D+VDSALKD
Sbjct: 71 GERQDSSAAAYNVVHKLPHGDSPYVRAKHVQLVEKDAEAAIELFWIAIKARDRVDSALKD 130
Query: 86 MAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRL 145
MA++MKQ +RAEEAI+AI+SFR LC++ +QESLDNVL+DLYKKCGR+EEQ+ELLK+KL +
Sbjct: 131 MALLMKQQNRAEEAIDAIQSFRDLCSRQAQESLDNVLIDLYKKCGRIEEQVELLKQKLWM 190
Query: 146 IYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMI 205
IYQGEAFNG+ TKTARSHGKKFQV++++ET+R+LGNLGWAYMQ +Y AE V++KAQ+I
Sbjct: 191 IYQGEAFNGKPTKTARSHGKKFQVTVEKETSRILGNLGWAYMQLMDYTAAEAVYRKAQLI 250
Query: 206 DADANKALNLALCLMRQSRYEEAYLIL-EQVLQGKLPGSDEIKSRNRAEELLVELSANLP 264
+ DANKA NL CL++Q +++EA IL VL GS + + R +ELL EL
Sbjct: 251 EPDANKACNLCTCLIKQGKHDEARSILFRDVLMENKEGSGDPRLMARVQELLSELKPQEE 310
Query: 265 QP----KFMDDLGLDD-DLLKGIDGLLNVW-SPTRSRRLPIFEEISSFRDQLAC 312
+ ++G+D+ +++G+D + W P R+RRLPIFEEI RDQLAC
Sbjct: 311 EAAASVSVECEVGIDEIAVVEGLDEFVKEWRRPYRTRRLPIFEEILPLRDQLAC 364
>dbj|BAD34381.1| putative pollenless3 [Oryza sativa (japonica cultivar-group)]
Length = 515
Score = 288 bits (736), Expect = 2e-76
Identities = 152/269 (56%), Positives = 189/269 (69%), Gaps = 13/269 (4%)
Query: 34 DLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQL 93
D +HV HKVP GDTPYV+AK QLVDKDPE AI FW AINAGD+VDSALKDMA+VMKQ
Sbjct: 52 DSFHVAHKVPVGDTPYVRAKRVQLVDKDPEKAIALFWAAINAGDRVDSALKDMAIVMKQQ 111
Query: 94 DRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEAFN 153
+RAEEAIEAIKS R C+ +QESLDN+LLDLYK+CGR+++QI LLK KL+LI+QG AFN
Sbjct: 112 NRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQISLLKHKLQLIHQGHAFN 171
Query: 154 GRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANKAL 213
G+ TKTARS G+KFQV+++QE RLLGNLGWA MQK NY AE +++A +I D NK
Sbjct: 172 GKRTKTARSQGRKFQVTLEQEATRLLGNLGWALMQKENYTEAEGAYRRALLIGPDNNKMC 231
Query: 214 NLALCLMRQSRYEEAYLILEQV----LQGKLPGSDEIKSRNRAEELLVELSANL------ 263
NL +CLM+Q R EA +L+QV + G +K+ RA+E+L +L A L
Sbjct: 232 NLGICLMKQGRVLEAKDVLKQVRPAGVDGLRGADSHLKAYERAQEMLRDLEAKLVGRRLP 291
Query: 264 -PQPKFMDDLGLDDDLLKGIDGLLNVWSP 291
+ +D L D LL G ++W P
Sbjct: 292 RAGDQLVDKSWLFDALLLGSSS--SIWQP 318
>emb|CAB62650.1| MS5-like protein [Arabidopsis thaliana] gi|30102656|gb|AAP21246.1|
At3g51280 [Arabidopsis thaliana]
gi|15230439|ref|NP_190696.1| male sterility MS5,
putative [Arabidopsis thaliana] gi|11358516|pir||T45759
MS5-like protein - Arabidopsis thaliana
Length = 430
Score = 275 bits (704), Expect = 9e-73
Identities = 144/264 (54%), Positives = 188/264 (70%), Gaps = 5/264 (1%)
Query: 32 KEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMK 91
+ + +H IHKVP GD+PYV+AK+ QLV+KDPE AI FWKAINAGD+VDSALKDMA+VMK
Sbjct: 26 QSESFHAIHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWKAINAGDRVDSALKDMAIVMK 85
Query: 92 QLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEA 151
Q +RAEEAIEAIKS R C+ +QESLDN+LLDLYK+CGR+++QI LLK KL LI +G A
Sbjct: 86 QQNRAEEAIEAIKSLRVRCSDQAQESLDNILLDLYKRCGRLDDQIGLLKHKLFLIQKGLA 145
Query: 152 FNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANK 211
FNG+ TKTARS GKKFQVS++QE RLLGNLGWA MQ+ N++ AE +++A I D NK
Sbjct: 146 FNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQRDNFVEAEDAYRRALSIAPDNNK 205
Query: 212 ALNLALCLMRQSRYEEAYLILEQVLQGKLPG----SDEIKSRNRAEELLVELSANLPQPK 267
NL +CLM+Q R +EA L +V + G +K+ RA+++L +L + + + +
Sbjct: 206 MCNLGICLMKQGRIDEAKETLRRVKPAVVDGPRGVDSHLKAYERAQQMLNDLGSEMMR-R 264
Query: 268 FMDDLGLDDDLLKGIDGLLNVWSP 291
DD L I G ++W P
Sbjct: 265 GGDDKVEQRRLFDAIFGSSSIWQP 288
>gb|AAC97106.1| pollenless3 [Arabidopsis thaliana]
Length = 434
Score = 253 bits (647), Expect = 4e-66
Identities = 130/245 (53%), Positives = 173/245 (70%), Gaps = 8/245 (3%)
Query: 27 SSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDM 86
SS ++ D +H++HKVP GD+PYV+AKHAQL+DKDP AI FW AINAGD+VDSALKDM
Sbjct: 42 SSSSERRDPFHIVHKVPSGDSPYVRAKHAQLIDKDPNRAISLFWTAINAGDRVDSALKDM 101
Query: 87 AVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLI 146
AVVMKQL R++E IEAIKSFR LC+ SQ+S+DN+LL+LYKK GR+EE+ LL+ KL+ +
Sbjct: 102 AVVMKQLGRSDEGIEAIKSFRYLCSFESQDSIDNLLLELYKKSGRIEEEAVLLEHKLQTL 161
Query: 147 YQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMID 206
QG F GR ++ R GK ++I+QE AR+LGNLGW ++Q NY +AE +++A ++
Sbjct: 162 EQGMGFGGRVSRAKRVQGKHVIMTIEQEKARILGNLGWVHLQLHNYGIAEQHYRRALGLE 221
Query: 207 ADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDE------IKSRNRAEELLVELS 260
D NK NLA+CLMR SR EA +L+ V P E KS +RA E+L E+
Sbjct: 222 RDKNKLCNLAICLMRMSRIPEAKSLLDDVRDS--PAESECGDEPFAKSYDRAVEMLAEIE 279
Query: 261 ANLPQ 265
+ P+
Sbjct: 280 SKKPE 284
>gb|AAC72541.1| male sterility MS5 [Arabidopsis thaliana]
Length = 434
Score = 253 bits (647), Expect = 4e-66
Identities = 130/245 (53%), Positives = 173/245 (70%), Gaps = 8/245 (3%)
Query: 27 SSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDM 86
SS ++ D +H++HKVP GD+PYV+AKHAQL+DKDP AI FW AINAGD+VDSALKDM
Sbjct: 42 SSSSERRDPFHIVHKVPSGDSPYVRAKHAQLIDKDPNRAISLFWTAINAGDRVDSALKDM 101
Query: 87 AVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLI 146
AVVMKQL R++E IEAIKSFR LC+ SQ+S+DN+LL+LYKK GR+EE+ LL+ KL+ +
Sbjct: 102 AVVMKQLGRSDEGIEAIKSFRYLCSFESQDSIDNLLLELYKKSGRIEEEAVLLEHKLQTL 161
Query: 147 YQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMID 206
QG F GR ++ R GK ++I+QE AR+LGNLGW ++Q NY +AE +++A ++
Sbjct: 162 EQGMGFGGRVSRAKRVQGKHVIMTIEQEKARILGNLGWVHLQLHNYGIAEQHYRRALGLE 221
Query: 207 ADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDE------IKSRNRAEELLVELS 260
D NK NLA+CLMR SR EA +L+ V P E KS +RA E+L E+
Sbjct: 222 RDKNKLCNLAICLMRMSRIPEAKSLLDDVRDS--PAESECGDEPFAKSYDRAVEMLAEIE 279
Query: 261 ANLPQ 265
+ P+
Sbjct: 280 SKKPE 284
>emb|CAB79090.1| putative protein [Arabidopsis thaliana] gi|5262780|emb|CAB45885.1|
putative protein [Arabidopsis thaliana]
gi|15233432|ref|NP_193822.1| male sterility MS5 /
pollenless 3 [Arabidopsis thaliana]
gi|7486981|pir||T10632 hypothetical protein T13K14.60 -
Arabidopsis thaliana
Length = 450
Score = 243 bits (620), Expect = 5e-63
Identities = 130/261 (49%), Positives = 173/261 (65%), Gaps = 24/261 (9%)
Query: 27 SSKGKKEDLYHVIHKVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDM 86
SS ++ D +H++HKVP GD+PYV+AKHAQL+DKDP AI FW AINAGD+VDSALKDM
Sbjct: 42 SSSSERRDPFHIVHKVPSGDSPYVRAKHAQLIDKDPNRAISLFWTAINAGDRVDSALKDM 101
Query: 87 AVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLI 146
AVVMKQL R++E IEAIKSFR LC+ SQ+S+DN+LL+LYKK GR+EE+ LL+ KL+ +
Sbjct: 102 AVVMKQLGRSDEGIEAIKSFRYLCSFESQDSIDNLLLELYKKSGRIEEEAVLLEHKLQTL 161
Query: 147 YQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFK------ 200
QG F GR ++ R GK ++I+QE AR+LGNLGW ++Q NY +AE ++
Sbjct: 162 EQGMGFGGRVSRAKRVQGKHVIMTIEQEKARILGNLGWVHLQLHNYGIAEQHYRFGFVTK 221
Query: 201 ----------KAQMIDADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPGSDE----- 245
+A ++ D NK NLA+CLMR SR EA +L+ V P E
Sbjct: 222 IPNIDYCLVMRALGLERDKNKLCNLAICLMRMSRIPEAKSLLDDVRDS--PAESECGDEP 279
Query: 246 -IKSRNRAEELLVELSANLPQ 265
KS +RA E+L E+ + P+
Sbjct: 280 FAKSYDRAVEMLAEIESKKPE 300
>ref|XP_479930.1| putative pollenless3 [Oryza sativa (japonica cultivar-group)]
gi|29467532|dbj|BAC66721.1| putative pollenless3 [Oryza
sativa (japonica cultivar-group)]
Length = 815
Score = 223 bits (567), Expect = 7e-57
Identities = 111/216 (51%), Positives = 155/216 (71%), Gaps = 1/216 (0%)
Query: 46 DTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKS 105
D+PYV+AK AQ+++KDP A+ FW AIN+GD+++SALKDMA V+KQ +RAEEAIEAI+S
Sbjct: 85 DSPYVRAKQAQVIEKDPNKAVPLFWAAINSGDRIESALKDMATVLKQANRAEEAIEAIRS 144
Query: 106 FRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGK 165
FR C +QESLDN+LLDLYKKCGR +EQIE+L KLR++ + A TK ++SHG+
Sbjct: 145 FRDRCPNEAQESLDNILLDLYKKCGRTKEQIEMLTLKLRIVDEELASGRWKTKLSKSHGR 204
Query: 166 KFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANKALNLALCLMRQSRY 225
+S++ E ARLLGNL WA+MQ NY AE+++++A I+AD NK NLA+CL++ +
Sbjct: 205 VVYLSLRDEKARLLGNLAWAHMQSENYDEAEMLYRQALAIEADYNKECNLAICLIKTGKV 264
Query: 226 EEAYLILEQVLQGKLPGSDEIKSRNRAEELLVELSA 261
EA +L Q + ++S RA E+L+EL +
Sbjct: 265 AEAKYLL-QSIPDNCSDESHVRSLARAREMLMELES 299
>dbj|BAB10118.1| male sterility MS5; pollenless3 [Arabidopsis thaliana]
gi|67633856|gb|AAY78852.1| male sterility MS5 family
protein [Arabidopsis thaliana]
gi|15241471|ref|NP_199246.1| male sterility MS5 family
protein [Arabidopsis thaliana]
Length = 469
Score = 213 bits (542), Expect = 6e-54
Identities = 115/221 (52%), Positives = 148/221 (66%), Gaps = 3/221 (1%)
Query: 41 KVPYGDTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAI 100
+V GD+PYV+AKHAQLV KDP AI FW AINAGD+VDSALKDM VV+KQL+R +E I
Sbjct: 49 RVRTGDSPYVRAKHAQLVSKDPNRAISLFWAAINAGDRVDSALKDMVVVLKQLNRFDEGI 108
Query: 101 EAIKSFRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTA 160
EAIKSFR LC SQ+S+DN+LL+LY K GR+ E ELL+ KLR + Q + + GR
Sbjct: 109 EAIKSFRYLCPFESQDSIDNLLLELYMKSGRITEVAELLEHKLRTLEQDKHYGGRIKIAK 168
Query: 161 RSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANKALNLALCLM 220
RSH ++ +I+QE AR+LGNL W ++Q NY +AE ++ A ++ D NK NLA+CL+
Sbjct: 169 RSHEEQNNKTIEQEKARILGNLAWVHLQLHNYGIAEQYYRNALSLEPDNNKLCNLAICLI 228
Query: 221 RQSRYEEAYLILEQVLQ---GKLPGSDEIKSRNRAEELLVE 258
R R EA +LE V Q + KS RA E+L E
Sbjct: 229 RMERTHEAKSLLEDVKQSLGNQWKNEPFCKSFERATEMLAE 269
>gb|AAC72542.1| MS5-like protein [Arabidopsis thaliana] gi|25455795|pir||T51865
MS5-like protein [imported] - Arabidopsis thaliana
(fragment)
Length = 307
Score = 122 bits (305), Expect = 2e-26
Identities = 69/157 (43%), Positives = 96/157 (60%), Gaps = 5/157 (3%)
Query: 139 LKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETARLLGNLGWAYMQKTNYMMAEVV 198
LK KL LI +G AFNG+ TKTARS GKKFQVS++QE RLLGNLGWA MQ+ N++ AE
Sbjct: 1 LKHKLFLIQKGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQRDNFVEAEDA 60
Query: 199 FKKAQMIDADANKALNLALCLMRQSRYEEAYLILEQVLQGKLPG----SDEIKSRNRAEE 254
+++A I D NK NL +CLM+Q R +EA L +V + G +K+ RA++
Sbjct: 61 YRRALSIAPDNNKMCNLGICLMKQGRIDEAKETLRRVKPAVVDGPRGVDSHLKAYERAQQ 120
Query: 255 LLVELSANLPQPKFMDDLGLDDDLLKGIDGLLNVWSP 291
+L +L + + + + DD L I G ++W P
Sbjct: 121 MLNDLGSEMMR-RGGDDKVEQRRLFDAIFGSSSIWQP 156
>gb|AAT78774.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 274
Score = 82.0 bits (201), Expect = 2e-14
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 39/143 (27%)
Query: 57 LVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQE 116
+++KDP A+ FW AIN+GD+++SALK
Sbjct: 166 VIEKDPNKAVPLFWAAINSGDRIESALK-------------------------------- 193
Query: 117 SLDNVLLDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGKKFQVSIKQETA 176
D+ KC R +EQIE+L KL + + A TK ++SHG+ +S++ E A
Sbjct: 194 -------DMATKCDRTKEQIEMLTLKLIFVDEELASGRWKTKLSKSHGRVVYLSLRDEKA 246
Query: 177 RLLGNLGWAYMQKTNYMMAEVVF 199
LLGNL WA+MQ NY AE+++
Sbjct: 247 WLLGNLAWAHMQSENYDGAEMLY 269
>gb|AAR87226.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 160
Score = 69.7 bits (169), Expect = 1e-10
Identities = 29/47 (61%), Positives = 40/47 (84%)
Query: 46 DTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQ 92
D+PYV+AK AQ+++KDP A+ FW AIN+GD+++SALKDMA V+KQ
Sbjct: 112 DSPYVRAKQAQVIEKDPNKAVPLFWAAINSGDRIESALKDMATVLKQ 158
>gb|AAL94055.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gi|19705261|ref|NP_602756.1| Tetratricopeptide repeat
family protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 345
Score = 47.8 bits (112), Expect = 4e-04
Identities = 53/189 (28%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 61 DPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDN 120
D E + Y +A G + +M + +L+RAEE +E +K L + E+++
Sbjct: 89 DYEQGLKYLLEAEKLGRDDEWLNTEMGQCLGRLERAEEGLERLKKSLKLIETEAPENINE 148
Query: 121 VLL---DLYKKCGRVEEQIELLK---------RKLRLIYQGEAFNGRTTKTARSHGKKFQ 168
+ ++ G +E E LK RK IY FN +K K F+
Sbjct: 149 KIFINSEIGYLYGFLENSEEALKYFHIAKDLGRKDDWIYMHLWFNLERSKGKEEALKYFE 208
Query: 169 VSIKQE--TARLLGNLGWAYMQK-TNYMMAEVVFKKAQMIDADANKALNLALCLMRQSRY 225
K + A + +LG YM NY AE VFKKA + D N + L RY
Sbjct: 209 NEAKTDDKNAIVWASLGQIYMNFFRNYEEAEKVFKKAFGLSGDGLYLYNRGMVLRILGRY 268
Query: 226 EEAYLILEQ 234
+EA +L Q
Sbjct: 269 KEAVEVLLQ 277
>gb|AAU07067.1| surface-located membrane protein 1 [Borrelia garinii PBi]
gi|51598471|ref|YP_072659.1| surface-located membrane
protein 1 [Borrelia garinii PBi]
Length = 906
Score = 42.7 bits (99), Expect = 0.013
Identities = 49/227 (21%), Positives = 101/227 (43%), Gaps = 18/227 (7%)
Query: 46 DTPYVKAKHAQLVDKDPEVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKS 105
DT Y + A+ + D + A F A N K++ ALK +V L +++ E +
Sbjct: 630 DTAYYQKGIAEEKNGDMQQAFTSFKNAYNIDKKLNYALK-AGIVSNNLGNFKKSEEYLSF 688
Query: 106 FRGLCNKHSQESLDNVLLDLYKKCGRVEEQIELLKRKLRL-------IYQGEAFNGRTTK 158
F K ++ ++ N+ + ++ ++EE +E++ + L L +Y + N +
Sbjct: 689 FNDNAKKPNEIAIYNLSIAKFEN-NKLEESLEIINKALNLNPEKSEYLYLKASINLKNEN 747
Query: 159 TARSHGKKFQVSIKQ-ETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANKAL-NLA 216
+ V K E NL AY + N A+ + ++I+ + AL NL
Sbjct: 748 YQNAISLYSSVIEKNPENTSAYINLAKAYEKLGN--KAQAISTLEKIINKNNKLALNNLG 805
Query: 217 LCLMRQSRYEEAYLILEQVLQGKLPGSDEIKSRNRAEELLVELSANL 263
+ +Q Y++A I E+ ++ + +I+++ L+E++ N+
Sbjct: 806 ILYKKQKNYQKAIEIFEKAIK-----NSDIEAKYNLATTLIEINDNI 847
>ref|ZP_00513782.1| TPR repeat:Sel1-like repeat:Sel1-like repeat [Crocosphaera watsonii
WH 8501] gi|67857746|gb|EAM52985.1| TPR repeat:Sel1-like
repeat:Sel1-like repeat [Crocosphaera watsonii WH 8501]
Length = 353
Score = 42.4 bits (98), Expect = 0.018
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 16/231 (6%)
Query: 63 EVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQE--SLDN 120
E AI + KAI A +M + + + EEAI A K L ++ ++ N
Sbjct: 111 EEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYNMGN 170
Query: 121 VLLDLYKKCGRVEEQIELLKRKLRLIYQGEAFNGRTTKTARSHGK--------KFQVSIK 172
L + G++EE I K+ + L R GK K + I
Sbjct: 171 AL----NRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQGKYDEAIAAYKKAIEIN 226
Query: 173 QETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDA-DANKALNLALCLMRQSRYEEAYLI 231
A N+G A ++ Y A +KKA I+ DA N+ L L Q +Y+EA
Sbjct: 227 PNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDAFGYNNMGLALDDQGKYDEAIAA 286
Query: 232 LEQVLQGKLPGSDEIKSRNRAEELLVELSANLPQPKFMDDLGLDDDLLKGI 282
++ L+ P ++ + E L+ ++ N P P D L + +G+
Sbjct: 287 HKKALEID-PNLVLAQNNLKEAERLLAINNNPPLPNIDDRDYLPTETQEGL 336
Score = 39.7 bits (91), Expect = 0.11
Identities = 46/188 (24%), Positives = 83/188 (43%), Gaps = 19/188 (10%)
Query: 63 EVAIVYFWKAINAGDKVDSALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVL 122
E A + KAI A +M +++ + EEAI A K L + + + +N+
Sbjct: 77 EEATAAYKKAIELDPNYSFAYNNMGNALRKQGKLEEAIAAYKKAIEL-DPNDAFAYNNMG 135
Query: 123 LDLYKKCGRVEEQIELLKRKLRL--------IYQGEAFN--GRTTKTARSHGKKFQVSIK 172
L L + G++EE I K+ + L G A N G+ + ++ K ++
Sbjct: 136 LALDDQ-GKLEEAIAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPN 194
Query: 173 QETARLLGNLGWAYMQKTNYMMAEVVFKKAQMIDADANKAL---NLALCLMRQSRYEEAY 229
A N+G A ++ Y A +KKA I+ + N A N+ + L +Q +Y+EA
Sbjct: 195 YSFA--YNNMGVALRKQGKYDEAIAAYKKA--IEINPNYAFAYNNMGVALRKQGKYDEAI 250
Query: 230 LILEQVLQ 237
++ ++
Sbjct: 251 AAYKKAIE 258
>ref|NP_213628.1| cell division protein FtsY [Aquifex aeolicus VF5]
gi|2983449|gb|AAC07030.1| cell division protein FtsY
[Aquifex aeolicus VF5] gi|7443750|pir||G70379 cell
division protein FtsY - Aquifex aeolicus
gi|6225393|sp|O67066|FTSY_AQUAE Cell division protein
ftsY homolog
Length = 461
Score = 42.4 bits (98), Expect = 0.018
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 13/134 (9%)
Query: 23 VLKKSSKGKKEDLYHVIHKVPYGDTPYVKA-----KHAQLVDKDPEVAIVY-----FWKA 72
+LKK + ++EDL ++ ++ + V+A K+ + K E A VY + KA
Sbjct: 37 ILKKYAS-QREDLAELLFELYVQEGKLVQAYPLLKKYGDKIGKAKERAKVYQAVGEYQKA 95
Query: 73 INAGDKVDS--ALKDMAVVMKQLDRAEEAIEAIKSFRGLCNKHSQESLDNVLLDLYKKCG 130
I KV +L ++A + QL++ ++A+E + L +E L+N + L K+ G
Sbjct: 96 IEEFLKVGDFESLYNVAKIYHQLEKPDKALEYAQRAEKLVPYEKKEELENFITQLKKELG 155
Query: 131 RVEEQIELLKRKLR 144
+EE+ E + KLR
Sbjct: 156 LIEEKKESILDKLR 169
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,706,917
Number of Sequences: 2540612
Number of extensions: 19467798
Number of successful extensions: 54293
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 54088
Number of HSP's gapped (non-prelim): 285
length of query: 312
length of database: 863,360,394
effective HSP length: 128
effective length of query: 184
effective length of database: 538,162,058
effective search space: 99021818672
effective search space used: 99021818672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)
Medicago: description of AC130200.5