BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC129091.6 - phase: 0 /pseudo
(1077 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192401.2| expressed protein [Arabidopsis thaliana] 402 e-110
gb|AAM93675.1| putative glycine-rich protein [Oryza sativa (japo... 386 e-105
gb|AAL58272.2| hypothetical protein, 3'-partial [Oryza sativa (j... 386 e-105
emb|CAB81034.1| hypothetical protein [Arabidopsis thaliana] gi|2... 340 1e-91
ref|YP_165060.1| glycine betaine/proline ABC transporter, peripl... 40 0.32
ref|XP_641853.1| hypothetical protein DDB0218153 [Dictyostelium ... 40 0.42
gb|AAM35642.1| conserved hypothetical protein [Xanthomonas axono... 36 7.9
>ref|NP_192401.2| expressed protein [Arabidopsis thaliana]
Length = 1250
Score = 402 bits (1032), Expect = e-110
Identities = 203/317 (64%), Positives = 235/317 (74%), Gaps = 22/317 (6%)
Query: 18 IEEVEAGTVFHIRLKQSPSTLLHKMNLHESMRRNFSAVAWCAKLNAIACATETCARIPRS 77
I+ V TVF ++LKQ S LLHKM++ E + RNFSAVAWC KLNAIACA+ETCARIP S
Sbjct: 79 IDPVSPATVFCVKLKQPNSNLLHKMSVPE-LCRNFSAVAWCGKLNAIACASETCARIPSS 137
Query: 78 SVNPPFWIPIHIVIPERPTENAVFNVVADSPLDSVQFIQWSPVCCPRALLIANFHGRVTI 137
N PFWIPIHI+IPERPTE AVFNVVADSP DSVQFI+WSP CPRALLIANFHGR+TI
Sbjct: 138 KANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIANFHGRITI 197
Query: 138 WTQPSHGPANLVIDTNCWLREHEWRQDTAVVTKWLSG---YRWLSSKSSAPANLKSIFEE 194
WTQP+ G ANLV D W EHEWRQD AVVTKWL+G YRWLSSK S+ N KS FEE
Sbjct: 198 WTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGASPYRWLSSKPSSGTNAKSTFEE 257
Query: 195 KFISQQSQ---------------TSGSVQLHWSQWPPTQNATLHKWFCTSKGLLACGPSG 239
KF+SQ S+ +SGSVQ+HWSQWP Q +T KWF T KGLL GPSG
Sbjct: 258 KFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAPKWFSTKKGLLGAGPSG 317
Query: 240 IITGDAIITDNGTLLVAGVPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVPP-LSAPN 298
I+ DAIITD+G + VAGVP VNP+ I+VWEV PG GN LQ +PK S + VPP LS+ +
Sbjct: 318 IMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPSLSSSS 377
Query: 299 WSGFAPL--YHFTARQF 313
W+GFAPL Y F+ +++
Sbjct: 378 WTGFAPLAAYLFSWQEY 394
Score = 244 bits (622), Expect = 1e-62
Identities = 157/347 (45%), Positives = 193/347 (55%), Gaps = 56/347 (16%)
Query: 738 TTISGGSTQMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPISINTETFPGTPAVR 797
TT S GS+ + AW+Q AIAKISS++DG SN T SPI G + MPISINT TFPGTPAVR
Sbjct: 886 TTNSSGSSHVQAWMQGAIAKISSSNDG-SNST-ASPISGSPTFMPISINTGTFPGTPAVR 943
Query: 798 LIGDCHFLQRLCQLLFFCFFFKRSQLV----------LYMNGLRRTAETS-------LVR 840
LIGDCHFL RLCQLL FCF + S+ L + E + L R
Sbjct: 944 LIGDCHFLHRLCQLLLFCFLQRSSRFPQRNADVSSQKLQTGATSKLEEVNSAKPTPALNR 1003
Query: 841 SDDGQTGRAGQIVHGSKGGEEPSLGHIRLGTGNSGQGYSFKEAALY*G------------ 888
+D Q R Q+ G KG +E S ++G+GN+GQGY+++E +
Sbjct: 1004 IEDAQGFRGAQLGTGVKGIDENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGL 1063
Query: 889 --ELHCTS*GFGSIPCHTSACNFHYIKMA----------MQNIPRPRGVDDTRLLLRKLE 936
L + G G+I + +Y + MQN+PRPRG D LLLR+LE
Sbjct: 1064 AHPLPGSQVGSGNIQVRLHYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAAGLLLRELE 1123
Query: 937 LLPPAEVWHRLNMFGGPCTDPDD----SPRPVRSNPLDSRSLESNNIDYGTN---GLWPR 989
L PP+E WHR N+FGGP ++P+D SN LD + I G N LWPR
Sbjct: 1124 LHPPSEEWHRRNLFGGPGSEPEDMILTDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPR 1183
Query: 990 KHRMIERDAAFALNTS------LDIMGSRRDVITTSWKTGLEGVWYK 1030
K RM ERDAAF NTS L IMGSRRDV+T +WKTGLEGVWYK
Sbjct: 1184 KRRMSERDAAFGSNTSVGLGAYLGIMGSRRDVVTATWKTGLEGVWYK 1230
Score = 76.3 bits (186), Expect = 5e-12
Identities = 38/57 (66%), Positives = 44/57 (76%)
Query: 537 AYVDSVLDLALSFFTRLRCYAKFCRTLASQAATAGNVSNQNMVASPAQNSTTPETSQ 593
AYVD+VLDLA F TRLR YA FCRTLAS AA+AG SN+N V SP QN+++P T Q
Sbjct: 807 AYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVTSPTQNASSPATPQ 863
>gb|AAM93675.1| putative glycine-rich protein [Oryza sativa (japonica
cultivar-group)] gi|31432881|gb|AAP54457.1| putative
glycine-rich protein [Oryza sativa (japonica
cultivar-group)] gi|37535736|ref|NP_922170.1| putative
glycine-rich protein [Oryza sativa (japonica
cultivar-group)]
Length = 1291
Score = 386 bits (992), Expect = e-105
Identities = 193/305 (63%), Positives = 233/305 (76%), Gaps = 13/305 (4%)
Query: 19 EEVEAGTVFHIRLKQSPSTLLHKMNLHESMRRNFSAVAWCAKLNAIACATETCARIPRSS 78
++ TVF IRLKQ PS+L HKM + E + RNFSAVAWC KLNAIACA+ETCARIP S+
Sbjct: 109 QQASPATVFRIRLKQPPSSLRHKMRVPE-LCRNFSAVAWCGKLNAIACASETCARIPSSN 167
Query: 79 VNPPFWIPIHIVIPERPTENAVFNVVADSPLDSVQFIQWSPVCCPRALLIANFHGRVTIW 138
+PPFWIPIHI+ PERPTE +VFNV ADSP D VQFI+WSP CPRALL+ANFHGR+TIW
Sbjct: 168 SSPPFWIPIHILNPERPTECSVFNVKADSPRDFVQFIEWSPRSCPRALLVANFHGRITIW 227
Query: 139 TQPSHGPANLVIDTNCWLREHEWRQDTAVVTKWLSG---YRWLSSKSSAPANLKSIFEEK 195
TQP+ GP NLV D + W EHEWRQD +VVTKWLSG YRWL + SS +NLK+ FEEK
Sbjct: 228 TQPTKGPTNLVRDASSWQCEHEWRQDLSVVTKWLSGISPYRWLPANSSTSSNLKT-FEEK 286
Query: 196 FISQQSQ----TSGSVQLHWSQWPPTQNATLHKWFCTSKGLLACGPSGIITGDAIITDNG 251
F++QQ Q +SGSVQLHWSQW P+QN+ +WF TSKGLL GPSGI+ DAIIT+ G
Sbjct: 287 FLTQQPQSSVFSSGSVQLHWSQW-PSQNSAQPRWFSTSKGLLGAGPSGIMAADAIITETG 345
Query: 252 TLLVAGVPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVPP-LSAPNWSGFAPL--YHF 308
L VAGVP VNP+ ++VWEVMPG GN +Q + K + + +PP L+ P W+GFAPL Y F
Sbjct: 346 ALHVAGVPLVNPSTVVVWEVMPGLGNGIQATAKINATSSLPPSLNPPLWAGFAPLASYLF 405
Query: 309 TARQF 313
+ + +
Sbjct: 406 SLQDY 410
Score = 325 bits (833), Expect = 5e-87
Identities = 190/409 (46%), Positives = 236/409 (57%), Gaps = 67/409 (16%)
Query: 733 GGENGTTISGGSTQMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPISINTETFPG 792
G + G + GS+QM WVQ AIAKIS+ +DG +N P +PI G SS MPISINT TFPG
Sbjct: 885 GNQGGVASTTGSSQMQEWVQGAIAKISNNTDGAANAAP-NPISGRSSFMPISINTGTFPG 943
Query: 793 TPAVRLIGDCHFLQRLCQLLFFCFFFKRSQLVLYMNGLRRTAETSL-------------- 838
TPAVRLIGDCHFL RLCQLL FC F+R Q ++++++S+
Sbjct: 944 TPAVRLIGDCHFLHRLCQLLLFCLLFRRRQSPRIPANAQKSSDSSMQKQHLMNSKTEDNT 1003
Query: 839 --VRS-------DDGQTGRAGQIVHGSKGGEEPSLGH--IRLGTGNSGQGYSF------- 880
VRS +DG T R GQ+V G+KG EE +G+ R+G+GN+GQGY+
Sbjct: 1004 LAVRSGLGAAKLEDGTTSR-GQMV-GAKGAEENPVGNKSARIGSGNAGQGYTSDEVKVLF 1061
Query: 881 -------KEAALY*GELHCTS*GFGSIPCHTSACNFHYIKMA----------MQNIPRPR 923
K A L + G +I + +Y + MQN+PRPR
Sbjct: 1062 LILVDLCKRTATLQHPLPSSQVGSSNIIIRLHYIDGNYTVLPEVVEASLGPHMQNMPRPR 1121
Query: 924 GVDDTRLLLRKLELLPPAEVWHRLNMFGGPCTDPDD-----SPRPVRSNPLDSRSL---- 974
G D LLLR+LEL PPAE WHR NMFGGP ++PDD + R ++ N +R L
Sbjct: 1122 GADAAGLLLRELELQPPAEEWHRRNMFGGPWSEPDDLGPLDNTRQLKINGSTNRHLSDME 1181
Query: 975 ESNNIDYGTNGLWPRKHRMIERDAAFALNTS------LDIMGSRRDVITTSWKTGLEGVW 1028
E + +G LWPRK R+ ERDAAF L TS L +MGSRRDVIT WKTGLEG W
Sbjct: 1182 EDGDSSFGIQNLWPRKRRLSERDAAFGLKTSVGLGSFLGVMGSRRDVITAVWKTGLEGEW 1241
Query: 1029 YKCIRCMRQTSAFTSPASANIPNQNERESWWVSRWATNCPMCGGRWVRV 1077
YKCIRC+RQT AF P + NE E+WW+SRW CPMCGG WV+V
Sbjct: 1242 YKCIRCLRQTCAFAQPGALAPNTSNELEAWWISRWTHACPMCGGTWVKV 1290
Score = 68.9 bits (167), Expect = 8e-10
Identities = 35/60 (58%), Positives = 46/60 (76%), Gaps = 2/60 (3%)
Query: 538 YVDSVLDLALSFFTRLRCYAKFCRTLASQA--ATAGNVSNQNMVASPAQNSTTPETSQGS 595
YVD+VLDLA F TRLR YA FCRTLAS A A++G+ +++NMV SP +S +P T+QG+
Sbjct: 827 YVDAVLDLASHFITRLRRYASFCRTLASHAVGASSGSGNSRNMVTSPTNSSPSPSTNQGN 886
>gb|AAL58272.2| hypothetical protein, 3'-partial [Oryza sativa (japonica
cultivar-group)]
Length = 812
Score = 386 bits (992), Expect = e-105
Identities = 193/305 (63%), Positives = 233/305 (76%), Gaps = 13/305 (4%)
Query: 19 EEVEAGTVFHIRLKQSPSTLLHKMNLHESMRRNFSAVAWCAKLNAIACATETCARIPRSS 78
++ TVF IRLKQ PS+L HKM + E + RNFSAVAWC KLNAIACA+ETCARIP S+
Sbjct: 37 QQASPATVFRIRLKQPPSSLRHKMRVPE-LCRNFSAVAWCGKLNAIACASETCARIPSSN 95
Query: 79 VNPPFWIPIHIVIPERPTENAVFNVVADSPLDSVQFIQWSPVCCPRALLIANFHGRVTIW 138
+PPFWIPIHI+ PERPTE +VFNV ADSP D VQFI+WSP CPRALL+ANFHGR+TIW
Sbjct: 96 SSPPFWIPIHILNPERPTECSVFNVKADSPRDFVQFIEWSPRSCPRALLVANFHGRITIW 155
Query: 139 TQPSHGPANLVIDTNCWLREHEWRQDTAVVTKWLSG---YRWLSSKSSAPANLKSIFEEK 195
TQP+ GP NLV D + W EHEWRQD +VVTKWLSG YRWL + SS +NLK+ FEEK
Sbjct: 156 TQPTKGPTNLVRDASSWQCEHEWRQDLSVVTKWLSGISPYRWLPANSSTSSNLKT-FEEK 214
Query: 196 FISQQSQ----TSGSVQLHWSQWPPTQNATLHKWFCTSKGLLACGPSGIITGDAIITDNG 251
F++QQ Q +SGSVQLHWSQW P+QN+ +WF TSKGLL GPSGI+ DAIIT+ G
Sbjct: 215 FLTQQPQSSVFSSGSVQLHWSQW-PSQNSAQPRWFSTSKGLLGAGPSGIMAADAIITETG 273
Query: 252 TLLVAGVPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVPP-LSAPNWSGFAPL--YHF 308
L VAGVP VNP+ ++VWEVMPG GN +Q + K + + +PP L+ P W+GFAPL Y F
Sbjct: 274 ALHVAGVPLVNPSTVVVWEVMPGLGNGIQATAKINATSSLPPSLNPPLWAGFAPLASYLF 333
Query: 309 TARQF 313
+ + +
Sbjct: 334 SLQDY 338
Score = 66.2 bits (160), Expect = 5e-09
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Query: 538 YVDSVLDLALSFFTRLRCYAKFCRTLASQA--ATAGNVSNQNMVASPAQNSTTPETSQ 593
YVD+VLDLA F TRLR YA FCRTLAS A A++G+ +++NMV SP +S +P T+Q
Sbjct: 755 YVDAVLDLASHFITRLRRYASFCRTLASHAVGASSGSGNSRNMVTSPTNSSPSPSTNQ 812
>emb|CAB81034.1| hypothetical protein [Arabidopsis thaliana] gi|25372623|pir||H85061
hypothetical protein AT4g04920 [imported] - Arabidopsis
thaliana
Length = 1196
Score = 340 bits (873), Expect = 1e-91
Identities = 176/299 (58%), Positives = 203/299 (67%), Gaps = 40/299 (13%)
Query: 18 IEEVEAGTVFHIRLKQSPSTLLHKMNLHESMRRNFSAVAWCAKLNAIACATETCARIPRS 77
I+ V TVF ++LKQ S LLHKM++ E + RNFSAVAWC KLNAIACA+ETCARIP S
Sbjct: 79 IDPVSPATVFCVKLKQPNSNLLHKMSVPE-LCRNFSAVAWCGKLNAIACASETCARIPSS 137
Query: 78 SVNPPFWIPIHIVIPERPTENAVFNVVADSPLDSVQFIQWSPVCCPRALLIANFHGRVTI 137
N PFWIPIHI+IPERPTE AVFNVVADSP DSVQFI+WSP CPRALLIANFHGR+TI
Sbjct: 138 KANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWSPTSCPRALLIANFHGRITI 197
Query: 138 WTQPSHGPANLVIDTNCWLREHEWRQDTAVVTKWLSGYRWLSSKSSAPANLKSIFEEKFI 197
WTQP+ G ANLV D W EHEWRQD AVVTKWL+G
Sbjct: 198 WTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGA---------------------- 235
Query: 198 SQQSQTSGSVQLHWSQWPPTQNATLHKWFCTSKGLLACGPSGIITGDAIITDNGTLLVAG 257
S WP Q +T KWF T KGLL GPSGI+ DAIITD+G + VAG
Sbjct: 236 --------------SPWPSNQGSTAPKWFSTKKGLLGAGPSGIMAADAIITDSGAMHVAG 281
Query: 258 VPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVPP-LSAPNWSGFAPL--YHFTARQF 313
VP VNP+ I+VWEV PG GN LQ +PK S + VPP LS+ +W+GFAPL Y F+ +++
Sbjct: 282 VPIVNPSTIVVWEVTPGPGNGLQATPKISTGSRVPPSLSSSSWTGFAPLAAYLFSWQEY 340
Score = 244 bits (622), Expect = 1e-62
Identities = 157/347 (45%), Positives = 193/347 (55%), Gaps = 56/347 (16%)
Query: 738 TTISGGSTQMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPISINTETFPGTPAVR 797
TT S GS+ + AW+Q AIAKISS++DG SN T SPI G + MPISINT TFPGTPAVR
Sbjct: 832 TTNSSGSSHVQAWMQGAIAKISSSNDG-SNST-ASPISGSPTFMPISINTGTFPGTPAVR 889
Query: 798 LIGDCHFLQRLCQLLFFCFFFKRSQLV----------LYMNGLRRTAETS-------LVR 840
LIGDCHFL RLCQLL FCF + S+ L + E + L R
Sbjct: 890 LIGDCHFLHRLCQLLLFCFLQRSSRFPQRNADVSSQKLQTGATSKLEEVNSAKPTPALNR 949
Query: 841 SDDGQTGRAGQIVHGSKGGEEPSLGHIRLGTGNSGQGYSFKEAALY*G------------ 888
+D Q R Q+ G KG +E S ++G+GN+GQGY+++E +
Sbjct: 950 IEDAQGFRGAQLGTGVKGIDENSARTTKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGL 1009
Query: 889 --ELHCTS*GFGSIPCHTSACNFHYIKMA----------MQNIPRPRGVDDTRLLLRKLE 936
L + G G+I + +Y + MQN+PRPRG D LLLR+LE
Sbjct: 1010 AHPLPGSQVGSGNIQVRLHYIDGNYTVLPEVVEAALGPHMQNMPRPRGADAAGLLLRELE 1069
Query: 937 LLPPAEVWHRLNMFGGPCTDPDD----SPRPVRSNPLDSRSLESNNIDYGTN---GLWPR 989
L PP+E WHR N+FGGP ++P+D SN LD + I G N LWPR
Sbjct: 1070 LHPPSEEWHRRNLFGGPGSEPEDMILTDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPR 1129
Query: 990 KHRMIERDAAFALNTS------LDIMGSRRDVITTSWKTGLEGVWYK 1030
K RM ERDAAF NTS L IMGSRRDV+T +WKTGLEGVWYK
Sbjct: 1130 KRRMSERDAAFGSNTSVGLGAYLGIMGSRRDVVTATWKTGLEGVWYK 1176
Score = 76.3 bits (186), Expect = 5e-12
Identities = 38/57 (66%), Positives = 44/57 (76%)
Query: 537 AYVDSVLDLALSFFTRLRCYAKFCRTLASQAATAGNVSNQNMVASPAQNSTTPETSQ 593
AYVD+VLDLA F TRLR YA FCRTLAS AA+AG SN+N V SP QN+++P T Q
Sbjct: 753 AYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVTSPTQNASSPATPQ 809
>ref|YP_165060.1| glycine betaine/proline ABC transporter, periplasmic
substrate-binding protein [Silicibacter pomeroyi DSS-3]
gi|56680700|gb|AAV97365.1| glycine betaine/proline ABC
transporter, periplasmic substrate-binding protein
[Silicibacter pomeroyi DSS-3]
Length = 313
Score = 40.4 bits (93), Expect = 0.32
Identities = 20/63 (31%), Positives = 33/63 (51%), Gaps = 1/63 (1%)
Query: 200 QSQTSGSVQLHWSQWPPTQNATLHKWFCTSKGLLACGPSGIITGDAIITDNGTLLVAGVP 259
++ +G++Q+H W P Q+ LH F KG +A P+GI A+ GT G+
Sbjct: 66 EAMDAGAMQVHPEVWLPNQS-NLHNTFVKEKGTVAMNPNGIAADQAMCVTRGTAERTGIK 124
Query: 260 AVN 262
A++
Sbjct: 125 ALS 127
>ref|XP_641853.1| hypothetical protein DDB0218153 [Dictyostelium discoideum]
gi|60469894|gb|EAL67878.1| hypothetical protein
DDB0218153 [Dictyostelium discoideum]
Length = 1521
Score = 40.0 bits (92), Expect = 0.42
Identities = 22/71 (30%), Positives = 32/71 (44%), Gaps = 13/71 (18%)
Query: 1005 SLDIMGSRRDVITT-SWKTGLEGVWYKCIRCMRQTSAFTSPASANIPNQNERESWWVSRW 1063
S + MG D+IT ++ + KCIRC R T + +W RW
Sbjct: 1119 STEYMGIVHDIITRIPIAPRIDKPYKKCIRCHRITVMLRT------------SMFWSDRW 1166
Query: 1064 ATNCPMCGGRW 1074
+ CP+CGG+W
Sbjct: 1167 SMACPICGGKW 1177
>gb|AAM35642.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21241524|ref|NP_641106.1| hypothetical
protein XAC0753 [Xanthomonas axonopodis pv. citri str.
306]
Length = 526
Score = 35.8 bits (81), Expect = 7.9
Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 29/123 (23%)
Query: 209 LHWSQWPPTQNATLHKWFCTSKGLLACGPSGIITGDAI-------------ITDNGTLLV 255
L + W Q AT GLL+ P+G +TG + D+G +LV
Sbjct: 324 LDYPDWASVQQATTQLGLSAPAGLLS--PTGGLTGGTASGWQWRIATDVPSVADSGVVLV 381
Query: 256 AG------------VPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVPPLSAPNWSGFA 303
+G +P VN AA VW P G + + + + S+ V P S N S FA
Sbjct: 382 SGLLQGIGLPVSTSIPLVNRAAAAVWVGSPSNG-TRRLAGRPSLRVTVVP-SQSNVSLFA 439
Query: 304 PLY 306
LY
Sbjct: 440 YLY 442
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.340 0.148 0.510
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,801,234,885
Number of Sequences: 2540612
Number of extensions: 76056011
Number of successful extensions: 237715
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 237654
Number of HSP's gapped (non-prelim): 30
length of query: 1077
length of database: 863,360,394
effective HSP length: 139
effective length of query: 938
effective length of database: 510,215,326
effective search space: 478581975788
effective search space used: 478581975788
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 81 (35.8 bits)
Medicago: description of AC129091.6