BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126794.6 - phase: 0
(926 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S31164 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain, c... 1617 0.0
pir||B35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd... 1564 0.0
pir||A35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd... 1551 0.0
dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit ... 1533 0.0
gb|AAC04687.1| ClpC [Arabidopsis thaliana] gi|25289891|pir||T522... 1519 0.0
emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa (japonica cultivar... 1508 0.0
dbj|BAA82062.1| AtClpC [Arabidopsis thaliana] gi|25289890|pir||T... 1464 0.0
emb|CAB87915.1| AtClpC [Arabidopsis thaliana] gi|18408722|ref|NP... 1463 0.0
gb|AAD02267.1| ClpC protease [Spinacia oleracea] 1456 0.0
emb|CAA53077.1| clpA [Brassica napus] gi|1168972|sp|P46523|CLPA_... 1447 0.0
ref|ZP_00325035.1| COG0542: ATPases with chaperone activity, ATP... 1254 0.0
ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [... 1249 0.0
dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. ... 1244 0.0
ref|ZP_00163644.2| COG0542: ATPases with chaperone activity, ATP... 1243 0.0
ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [... 1242 0.0
ref|ZP_00162274.2| COG0542: ATPases with chaperone activity, ATP... 1242 0.0
ref|ZP_00110397.1| COG0542: ATPases with chaperone activity, ATP... 1237 0.0
ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit C... 1236 0.0
pir||S71553 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cl... 1236 0.0
gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa... 1234 0.0
>pir||S31164 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain, chloroplast
[similarity] - garden pea gi|461753|sp|P35100|CLPA_PEA
ATP-dependent clp protease ATP-binding subunit clpA
homolog, chloroplast precursor gi|169128|gb|AAA33680.1|
nuclear encoded precursor to chloroplast protein
Length = 922
Score = 1617 bits (4187), Expect = 0.0
Identities = 835/926 (90%), Positives = 877/926 (94%), Gaps = 4/926 (0%)
Query: 1 MSRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASPRLSSYSGLRTLNSLD 60
M+R LAQS++VPGLVAG + + +KG+ +S+RSV+ M RT+ R+S +SGLRT N L+
Sbjct: 1 MARVLAQSLSVPGLVAGHKD-SQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLN 59
Query: 61 SMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHN 120
+M+RPG DFHSKV + + RA R R + +AMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 60 TMMRPGLDFHSKVSKAVSSRRA---RAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHN 116
Query: 121 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 180
FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR
Sbjct: 117 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 176
Query: 181 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGA 240
VLELS EEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGE A
Sbjct: 177 VLELSQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESA 236
Query: 241 DSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP 300
DSV ATVGSGSSNNK PTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP
Sbjct: 237 DSVTATVGSGSSNNKTPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP 296
Query: 301 CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 360
CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL
Sbjct: 297 CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 356
Query: 361 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 420
MEEIKQSD+IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI
Sbjct: 357 MEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 416
Query: 421 EKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISD 480
EKDP LERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDEAL+AAA+LS+QYISD
Sbjct: 417 EKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLSYQYISD 476
Query: 481 RFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRD 540
RFLPDKAIDL+DEAGSRVRLQHAQLPEEA+ L+KEVR+IVKEK+E VRNQ+FEKAGELRD
Sbjct: 477 RFLPDKAIDLVDEAGSRVRLQHAQLPEEAKELDKEVRKIVKEKEEYVRNQDFEKAGELRD 536
Query: 541 KEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDR 600
KEMDLK QISALIEK KEM+KAE+E D G +VTEVDIQHIV+SWTGIPVDKVS DESDR
Sbjct: 537 KEMDLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDR 596
Query: 601 LLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 660
LLKMEDTLHKRIIGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL
Sbjct: 597 LLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 656
Query: 661 ASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 720
A+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE
Sbjct: 657 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 716
Query: 721 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 780
IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY
Sbjct: 717 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 776
Query: 781 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK 840
DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF+RLK
Sbjct: 777 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFQRLK 836
Query: 841 TKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 900
TKEIEL VTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD
Sbjct: 837 TKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 896
Query: 901 ADSDGNVIVLNGSTGAPDSLPDALPV 926
DSDG VIVLNGS+G P+SLP+AL +
Sbjct: 897 VDSDGKVIVLNGSSGTPESLPEALSI 922
>pir||B35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd4B, chloroplast
[similarity] - tomato gi|399213|sp|P31542|CLAB_LYCES
ATP-dependent clp protease ATP-binding subunit clpA
homolog CD4B, chloroplast precursor
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
Length = 923
Score = 1564 bits (4049), Expect = 0.0
Identities = 813/927 (87%), Positives = 859/927 (91%), Gaps = 5/927 (0%)
Query: 1 MSRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASPRLSSYSGLRTLNSLD 60
M+RAL QS ++P VAG R N G+ +++R+V M+ +++S L ++GLR N++D
Sbjct: 1 MARALVQSTSIPSSVAGERTTKFN-GSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAID 59
Query: 61 SMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHN 120
+++R G+ SKV R RG R V KAMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 60 TLVRSGETLQSKVAAATYVRRP---RGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHN 116
Query: 121 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 180
FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR
Sbjct: 117 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 176
Query: 181 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGA 240
VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQVIRMVGE
Sbjct: 177 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESN 236
Query: 241 DSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP 300
++VGA+VG G+S KMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP
Sbjct: 237 EAVGASVGGGTSGQKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP 296
Query: 301 CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 360
CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL
Sbjct: 297 CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 356
Query: 361 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 420
MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI
Sbjct: 357 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 416
Query: 421 EKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISD 480
EKDPALERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDE LVAAA+LS+QYISD
Sbjct: 417 EKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISD 476
Query: 481 RFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRD 540
RFLPDKAIDLIDEAGSRVRL+HAQLPEEA+ LEKE+RQI KEK+EAVR Q+FEKAGELRD
Sbjct: 477 RFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEKNEAVRGQDFEKAGELRD 536
Query: 541 KEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDR 600
+EMDLK QI+ALI+KNKE++KAESEA D G LVTE DIQHIV+SWTGIPV+KVS DESDR
Sbjct: 537 REMDLKAQITALIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDR 596
Query: 601 LLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 660
LLKME+TLH RIIGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL
Sbjct: 597 LLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 656
Query: 661 ASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 720
A+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE
Sbjct: 657 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 716
Query: 721 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 780
IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD
Sbjct: 717 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDL 776
Query: 781 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK 840
DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK
Sbjct: 777 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK 836
Query: 841 TKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 900
KEIEL VTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVIVD
Sbjct: 837 VKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVD 896
Query: 901 ADSDGNVIVLNGSTGAP-DSLPDALPV 926
DSDGNV VLNGS+G P D P+ +PV
Sbjct: 897 VDSDGNVTVLNGSSGTPSDPAPEPIPV 923
>pir||A35905 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd4A, chloroplast
[similarity] - tomato gi|399212|sp|P31541|CLAA_LYCES
ATP-dependent clp protease ATP-binding subunit clpA
homolog CD4A, chloroplast precursor
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A)
Length = 926
Score = 1551 bits (4015), Expect = 0.0
Identities = 812/929 (87%), Positives = 859/929 (92%), Gaps = 7/929 (0%)
Query: 1 MSRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASPRLSSYSGLRTLNSLD 60
M+RAL QS N+ VAG R N G+ + +R+VRM+ + S RL++++GLR N+LD
Sbjct: 2 MARALVQSTNILPSVAGERAGQFN-GSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALD 60
Query: 61 SML-RPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGH 119
++L + G+ HSKV R RG R V KAMFERFTEKAIKVIMLAQEEARRLGH
Sbjct: 61 TLLVKSGETLHSKVAAATFVRRP---RGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGH 117
Query: 120 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 179
NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGF+AVEIPFTPRAK
Sbjct: 118 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAK 177
Query: 180 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEG 239
RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGE
Sbjct: 178 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGES 237
Query: 240 ADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNN 299
+++VGA+VG G+S KMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNN
Sbjct: 238 SEAVGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNN 297
Query: 300 PCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKK 359
PCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKK
Sbjct: 298 PCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKK 357
Query: 360 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKH 419
LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKH
Sbjct: 358 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKH 417
Query: 420 IEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYIS 479
IEKDPALERRFQPVKVPEP+V ETIQILKGLRERYEIHHKL YTDEA+ AAA+LSHQYIS
Sbjct: 418 IEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYIS 477
Query: 480 DRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELR 539
DRFLPDKAIDLIDEAGSRVRL+HAQLPEEAR LEKE+RQI KEK+EAVR Q+FEKAGELR
Sbjct: 478 DRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELR 537
Query: 540 DKEMDLKTQISALIEKNKEMNKAESEAGD-VGALVTEVDIQHIVASWTGIPVDKVSVDES 598
D+EMDLK QISALI+KNKE +KAESEAGD G +VTE DIQHIV+SWTGIPV+KVS DES
Sbjct: 538 DREMDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKVSTDES 597
Query: 599 DRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 658
DRLLKME+TLH R+IGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK
Sbjct: 598 DRLLKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK 657
Query: 659 ALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 718
+LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF
Sbjct: 658 SLATYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLF 717
Query: 719 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 778
DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL
Sbjct: 718 DEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDL 777
Query: 779 DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFER 838
D+DEKDSSYNRIKSLVTEELKQYFRPEFLNRL EMIVFRQLTKLEVKEIADIMLKEVF R
Sbjct: 778 DFDEKDSSYNRIKSLVTEELKQYFRPEFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVR 837
Query: 839 LKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVI 898
LK KEIEL VTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLA EIKEGDSVI
Sbjct: 838 LKNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVI 897
Query: 899 VDADSDGNVIVLNGSTGAP-DSLPDALPV 926
VD DSDGNV VLNG++GAP DS P+ + V
Sbjct: 898 VDVDSDGNVTVLNGTSGAPSDSAPEPILV 926
>dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis
thaliana] gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7
[Arabidopsis thaliana] gi|18423214|ref|NP_568746.1|
ATP-dependent Clp protease ATP-binding subunit / ClpC
[Arabidopsis thaliana]
Length = 929
Score = 1533 bits (3968), Expect = 0.0
Identities = 804/930 (86%), Positives = 856/930 (91%), Gaps = 11/930 (1%)
Query: 2 SRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASP-RLSSYSGLRTLNSLD 60
+R LAQS P L +R+V + +G+ RSRRSV+MM + S R+ + GLR N+LD
Sbjct: 5 TRVLAQS-TPPSLACYQRNVPS-RGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNALD 62
Query: 61 SMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHN 120
++ + QDFHSKV + + G+ SR KAMFERFTEKAIKVIMLAQEEARRLGHN
Sbjct: 63 TLGKSRQDFHSKVRQAMNVPK---GKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHN 119
Query: 121 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 180
FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR
Sbjct: 120 FVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKR 179
Query: 181 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGA 240
VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQVIRMVGE
Sbjct: 180 VLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN- 238
Query: 241 DSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNP 300
+ V A VG GSS+NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGRRTKNNP
Sbjct: 239 NEVTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNP 298
Query: 301 CLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 360
CLIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL
Sbjct: 299 CLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKL 358
Query: 361 MEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 420
MEEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI
Sbjct: 359 MEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHI 418
Query: 421 EKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISD 480
EKDPALERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDE+LVAAA+LS+QYISD
Sbjct: 419 EKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISD 478
Query: 481 RFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRD 540
RFLPDKAIDLIDEAGSRVRL+HAQ+PEEAR LEKE+RQI KEK+EAVR Q+FEKAG LRD
Sbjct: 479 RFLPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRD 538
Query: 541 KEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDR 600
+E++L+ ++SA+ K KEM+KAESE G+ G +VTE DIQHIV+SWTGIPV+KVS DESDR
Sbjct: 539 REIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDR 598
Query: 601 LLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 660
LLKME+TLHKRIIGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL
Sbjct: 599 LLKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKAL 658
Query: 661 ASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 720
A+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE
Sbjct: 659 AAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDE 718
Query: 721 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 780
IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY
Sbjct: 719 IEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDY 778
Query: 781 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLK 840
DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVFERLK
Sbjct: 779 DEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLK 838
Query: 841 TKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 900
KEIEL VTERF+ERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD
Sbjct: 839 KKEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD 898
Query: 901 ADSDGNVIVLNGSTGAP----DSLPDALPV 926
D++GNV VLNG +G P + D+LPV
Sbjct: 899 VDAEGNVTVLNGGSGTPTTSLEEQEDSLPV 928
>gb|AAC04687.1| ClpC [Arabidopsis thaliana] gi|25289891|pir||T52292 endopeptidase
Clp (EC 3.4.21.92) ATP-binding chain C, chloroplast
[imported] - Arabidopsis thaliana
Length = 928
Score = 1519 bits (3933), Expect = 0.0
Identities = 797/929 (85%), Positives = 848/929 (90%), Gaps = 10/929 (1%)
Query: 2 SRALAQSINVPGLVAGRRHVNNNKGAARSRRSVRMMFTTRTASPRLSSYSGLRTLNSLDS 61
+R LAQS P L +R+V + +G+ RSRRSV+MM + + GLR N+LD+
Sbjct: 5 TRVLAQS-TPPSLACYQRNVPS-RGSGRSRRSVKMMCIIFNVWLPMQGFMGLRGNNALDT 62
Query: 62 MLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHNF 121
+ + QDFHSKV + + G+ SR KAMFERFTEKAIKVIMLAQEEARRLGHNF
Sbjct: 63 LGKSRQDFHSKVRQAMNVPK---GKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNF 119
Query: 122 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRV 181
VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRV
Sbjct: 120 VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRV 179
Query: 182 LELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGAD 241
LELSLE RQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQVIRMVGE +
Sbjct: 180 LELSLEATRQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN-N 238
Query: 242 SVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPC 301
V A VG GSS+NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERV QILGRRTKNNPC
Sbjct: 239 EVTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPC 298
Query: 302 LIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 361
LIGEPGVGKTAIAEGLAQRIA+GDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM
Sbjct: 299 LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLM 358
Query: 362 EEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIE 421
EEI+QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIE
Sbjct: 359 EEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIE 418
Query: 422 KDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISDR 481
KDPALERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDE+LVAAA+LS+QYISDR
Sbjct: 419 KDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDR 478
Query: 482 FLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRDK 541
FLPDKAIDLIDEAGSRVRL+HAQ+PEE R LEKE+RQI KEK+EAVR Q+FEKAG LRD+
Sbjct: 479 FLPDKAIDLIDEAGSRVRLRHAQVPEEVRELEKELRQITKEKNEAVRGQDFEKAGTLRDR 538
Query: 542 EMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESDRL 601
E++L+ ++SA+ K KEM+KAESE G+ G +VTE DIQHIV+SWTGIPV+KVS DESDRL
Sbjct: 539 EIELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRL 598
Query: 602 LKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 661
LKME+TLHKRIIGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA
Sbjct: 599 LKMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALA 658
Query: 662 SYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 721
+YYFGSEEAMIRLDMSEFMERHTVS LIGS PGYVGYTEGGQLTEAVRRRPYTVVLFDEI
Sbjct: 659 AYYFGSEEAMIRLDMSEFMERHTVSTLIGSLPGYVGYTEGGQLTEAVRRRPYTVVLFDEI 718
Query: 722 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 781
EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD
Sbjct: 719 EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYD 778
Query: 782 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKT 841
EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADI+LKEVFERLK
Sbjct: 779 EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKK 838
Query: 842 KEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDA 901
KEIEL VTERF+ERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVD
Sbjct: 839 KEIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDV 898
Query: 902 DSDGNVIVLNGSTGAP----DSLPDALPV 926
D++GNV VLNG +G P + D+LPV
Sbjct: 899 DAEGNVTVLNGGSGTPTTSLEEQEDSLPV 927
>emb|CAE05148.2| OSJNBa0039C07.4 [Oryza sativa (japonica cultivar-group)]
gi|50923949|ref|XP_472335.1| OSJNBa0039C07.4 [Oryza
sativa (japonica cultivar-group)]
Length = 888
Score = 1508 bits (3903), Expect = 0.0
Identities = 778/891 (87%), Positives = 831/891 (92%), Gaps = 3/891 (0%)
Query: 36 MMFTTRTASPRLSSYSGLRTLNSLDSMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAM 95
MM T T + L + GLR N LDS +DF S V +QI R G GSR V +AM
Sbjct: 1 MMRTMPTRTLTLGGFQGLRQTNFLDSRSVIKRDFGSIVASQISRPR---GLGSRGVVRAM 57
Query: 96 FERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARV 155
FERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARV
Sbjct: 58 FERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARV 117
Query: 156 EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAA 215
EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAA
Sbjct: 118 EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAA 177
Query: 216 RVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKL 275
RVLE+LGADP NIRTQVIRMVGE ++VGA VG GSS KMPTLEEYGTNLTKLAEEGKL
Sbjct: 178 RVLESLGADPNNIRTQVIRMVGESTEAVGAGVGGGSSGQKMPTLEEYGTNLTKLAEEGKL 237
Query: 276 DPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKV 335
DPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRI+NGDVPETIEGKKV
Sbjct: 238 DPVVGRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKV 297
Query: 336 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANI 395
ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQ+D+IILFIDEVHTLIGAGAAEGAIDAANI
Sbjct: 298 ITLDMGLLVAGTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANI 357
Query: 396 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYE 455
LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTV ETIQIL+GLRERYE
Sbjct: 358 LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRGLRERYE 417
Query: 456 IHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKE 515
+HHKLRYTD++L+AAA+LS+QYISDRFLPDKAIDLIDEAGSRVRL+HAQLP+EA+ L+KE
Sbjct: 418 LHHKLRYTDDSLIAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPDEAKELDKE 477
Query: 516 VRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTE 575
+RQ+ K+K+EAVR Q+FEKAGELRD+EM+LK QI+A+I+K+KEM KAE+E+G+VG LVTE
Sbjct: 478 LRQVTKDKNEAVRGQDFEKAGELRDREMELKAQITAIIDKSKEMVKAETESGEVGPLVTE 537
Query: 576 VDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKN 635
DIQHIV+SWTGIPV+KVS DESDRLLKME+TLH RIIGQ EAV+AISRAIRRARVGLKN
Sbjct: 538 ADIQHIVSSWTGIPVEKVSSDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKN 597
Query: 636 PNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 695
PNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY
Sbjct: 598 PNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGY 657
Query: 696 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 755
VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL
Sbjct: 658 VGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTL 717
Query: 756 LIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 815
LIMTSNVGSSVIEKGGR+IGFDLDYDEKD+SYNRIKSLVTEELKQYFRPEFLNRLDEMIV
Sbjct: 718 LIMTSNVGSSVIEKGGRKIGFDLDYDEKDTSYNRIKSLVTEELKQYFRPEFLNRLDEMIV 777
Query: 816 FRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIM 875
FRQLTKLEVKEIADIMLKEVF+RLK K+I+L VTE+FR+RVVDEGYNPSYGARPLRRAIM
Sbjct: 778 FRQLTKLEVKEIADIMLKEVFDRLKAKDIDLQVTEKFRDRVVDEGYNPSYGARPLRRAIM 837
Query: 876 RLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTGAPDSLPDALPV 926
RLLEDS+AEKMLA E+KEGDS IVD DS+G VIVLNG +G P+ L AL V
Sbjct: 838 RLLEDSLAEKMLAGEVKEGDSAIVDVDSEGKVIVLNGGSGVPEPLAPALSV 888
>dbj|BAA82062.1| AtClpC [Arabidopsis thaliana] gi|25289890|pir||T52456 endopeptidase
Clp ATP-binding chain C [imported] - Arabidopsis
thaliana
Length = 952
Score = 1464 bits (3791), Expect = 0.0
Identities = 764/903 (84%), Positives = 826/903 (90%), Gaps = 11/903 (1%)
Query: 31 RRSVRMMFTTRTASPRLSSYSGLRTLNSLDSMLRPGQDFHSKVLTQIGTNRAKGGRGSRC 90
R V+MM + + + S+SGLR ++LD + RP F K + R K SRC
Sbjct: 53 RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKA---SRC 109
Query: 91 VTKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 150
V KAMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL
Sbjct: 110 VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 169
Query: 151 KDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 210
KD+RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG
Sbjct: 170 KDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 229
Query: 211 EGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSS-NNKMPTLEEYGTNLTKL 269
EGVAARVLENLGADP+NIRTQVIRMVGE + V A+VG GSS N+KMPTLEEYGTNLTKL
Sbjct: 230 EGVAARVLENLGADPSNIRTQVIRMVGEN-NEVTASVGGGSSGNSKMPTLEEYGTNLTKL 288
Query: 270 AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 329
AEEGKLDPVVGRQPQIERV QIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPET
Sbjct: 289 AEEGKLDPVVGRQPQIERVVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPET 348
Query: 330 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 389
IEGK VITLDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGA
Sbjct: 349 IEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGA 408
Query: 390 IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKG 449
IDAANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEPTV E IQIL+G
Sbjct: 409 IDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
Query: 450 LRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEA 509
LRERYEIHHKLRYTDEALVAAA+LSHQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEA
Sbjct: 469 LRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 528
Query: 510 RGLEKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDV 569
R LEK++RQI KEK+EAVR+Q+FE AG RD+E++LK +I+ ++ + KE+ KAE+EA +
Sbjct: 529 RELEKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEG 588
Query: 570 GALVTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRA 629
G VTE DIQHIVA+WTGIPV+KVS DES RLL+ME TLH R+IGQ EAV+AISRAIRRA
Sbjct: 589 GPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRA 648
Query: 630 RVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLI 689
RVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 649 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 708
Query: 690 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 749
GSPPGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 709 GSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 768
Query: 750 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 809
DFKNTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNR
Sbjct: 769 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNR 828
Query: 810 LDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARP 869
LDEMIVFRQLTKLEVKEIADIMLKEV RL+ KEIEL VTERF+ERVVDEG++PSYGARP
Sbjct: 829 LDEMIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARP 888
Query: 870 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTG------APDSLPDA 923
LRRAIMRLLEDSMAEKML+R+IKEGDSVIVD D++G+V+VL+G+TG A +++ D
Sbjct: 889 LRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDP 948
Query: 924 LPV 926
+P+
Sbjct: 949 IPI 951
>emb|CAB87915.1| AtClpC [Arabidopsis thaliana] gi|18408722|ref|NP_566912.1|
ATP-dependent Clp protease ATP-binding subunit (ClpC)
[Arabidopsis thaliana] gi|11265212|pir||T49283 AtClpC -
Arabidopsis thaliana
Length = 952
Score = 1463 bits (3788), Expect = 0.0
Identities = 763/903 (84%), Positives = 826/903 (90%), Gaps = 11/903 (1%)
Query: 31 RRSVRMMFTTRTASPRLSSYSGLRTLNSLDSMLRPGQDFHSKVLTQIGTNRAKGGRGSRC 90
R V+MM + + + S+SGLR ++LD + RP F K + R K SRC
Sbjct: 53 RGRVKMMSSLQAPLLTIQSFSGLRAPSALDYLGRPSPGFLVKYKLAKSSGREKA---SRC 109
Query: 91 VTKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 150
V KAMFERFTEKAIKVIML+QEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL
Sbjct: 110 VPKAMFERFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINL 169
Query: 151 KDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 210
KD+RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG
Sbjct: 170 KDSRVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 229
Query: 211 EGVAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSS-NNKMPTLEEYGTNLTKL 269
EGVAARVLENLGADP+NIRTQVIRMVGE + V A+VG GSS N+KMPTLEEYGTNLTKL
Sbjct: 230 EGVAARVLENLGADPSNIRTQVIRMVGEN-NEVTASVGGGSSGNSKMPTLEEYGTNLTKL 288
Query: 270 AEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPET 329
AEEGKLDPVVGRQPQIER+ QIL RRTKNNPCLIGEPGVGKTAIAEGLAQRIA+GDVPET
Sbjct: 289 AEEGKLDPVVGRQPQIERMVQILARRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPET 348
Query: 330 IEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA 389
IEGK VITLDMGLLVAGTKYRGEFEERLKKLMEEI+QSDEIILFIDEVHTLIGAGAAEGA
Sbjct: 349 IEGKTVITLDMGLLVAGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGA 408
Query: 390 IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKG 449
IDAANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPVKVPEPTV E IQIL+G
Sbjct: 409 IDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
Query: 450 LRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEA 509
LRERYEIHHKLRYTDEALVAAA+LSHQYISDRFLPDKAIDLIDEAGSRVRL+HAQLPEEA
Sbjct: 469 LRERYEIHHKLRYTDEALVAAAQLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEA 528
Query: 510 RGLEKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDV 569
R LEK++RQI KEK+EAVR+Q+FE AG RD+E++LK +I+ ++ + KE+ KAE+EA +
Sbjct: 529 RELEKQLRQITKEKNEAVRSQDFEMAGSHRDREIELKAEIANVLSRGKEVAKAENEAEEG 588
Query: 570 GALVTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRA 629
G VTE DIQHIVA+WTGIPV+KVS DES RLL+ME TLH R+IGQ EAV+AISRAIRRA
Sbjct: 589 GPTVTESDIQHIVATWTGIPVEKVSSDESSRLLQMEQTLHTRVIGQDEAVKAISRAIRRA 648
Query: 630 RVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLI 689
RVGLKNPNRPIASFIFSGPTGVGKSELAKALA+YYFGSEEAMIRLDMSEFMERHTVSKLI
Sbjct: 649 RVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKLI 708
Query: 690 GSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 749
GSPPGYVGYTEGGQLTEAVRRRPYT+VLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV
Sbjct: 709 GSPPGYVGYTEGGQLTEAVRRRPYTLVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTV 768
Query: 750 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNR 809
DFKNTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRPEFLNR
Sbjct: 769 DFKNTLLIMTSNVGSSVIEKGGRRIGFDLDHDEKDSSYNRIKSLVTEELKQYFRPEFLNR 828
Query: 810 LDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARP 869
LDEMIVFRQLTKLEVKEIADIMLKEV RL+ KEIEL VTERF+ERVVDEG++PSYGARP
Sbjct: 829 LDEMIVFRQLTKLEVKEIADIMLKEVVARLEVKEIELQVTERFKERVVDEGFDPSYGARP 888
Query: 870 LRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGSTG------APDSLPDA 923
LRRAIMRLLEDSMAEKML+R+IKEGDSVIVD D++G+V+VL+G+TG A +++ D
Sbjct: 889 LRRAIMRLLEDSMAEKMLSRDIKEGDSVIVDVDAEGSVVVLSGTTGRVGGFAAEEAMEDP 948
Query: 924 LPV 926
+P+
Sbjct: 949 IPI 951
>gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 1456 bits (3770), Expect = 0.0
Identities = 763/893 (85%), Positives = 810/893 (90%), Gaps = 7/893 (0%)
Query: 1 MSRALAQSINVPGLVAGRRHVNNN-KGAARSRRSVRMMFTTRTASPRLSSYSGLRTLNSL 59
M+ AL QS N+P L VN + + + ++V+MM + + R+ ++SG+R N+L
Sbjct: 1 MAGALIQSTNIPSLAY---KVNGQFQRSDKGNKAVKMMASLQDPGYRMRTFSGVRGGNAL 57
Query: 60 DSMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGH 119
D++ + F+SK+ + + G SR V +AMFERFTEKAIKVIMLAQEEARRLGH
Sbjct: 58 DTLGTTSECFYSKMRAVLSVRK---GTASRGVVRAMFERFTEKAIKVIMLAQEEARRLGH 114
Query: 120 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 179
NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK
Sbjct: 115 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAK 174
Query: 180 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEG 239
RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQVIRMVGE
Sbjct: 175 RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGEN 234
Query: 240 ADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNN 299
++VGA VG G++ NKMPTLEEYGTNLTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNN
Sbjct: 235 TEAVGAGVGGGTTGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNN 294
Query: 300 PCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKK 359
PCLIGEPGVGKTAIAEGLAQRIA GDVPETIEGKKVITL MGLLVAGTKYRGEFEERLKK
Sbjct: 295 PCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLHMGLLVAGTKYRGEFEERLKK 354
Query: 360 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKH 419
LMEEIKQSDEIILFIDEVHTLIGAGAAEGAID ANILKP RGELQCIGATTLDEYRKH
Sbjct: 355 LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPRFRRGELQCIGATTLDEYRKH 414
Query: 420 IEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYIS 479
IEKDPALERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDEALVAAA+LS+QYIS
Sbjct: 415 IEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYIS 474
Query: 480 DRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELR 539
DRFLPDKAIDLIDEAGSRV + E EKE+RQ+ KEK+EAVR Q+FEKAGELR
Sbjct: 475 DRFLPDKAIDLIDEAGSRVLPSSLKKLESWLQHEKELRQLTKEKNEAVRGQDFEKAGELR 534
Query: 540 DKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVDESD 599
D+EMDLK QISAL+EK KEM+KAE+EAGDVG +VTE DIQHIV+SWTGIPV+KVS DESD
Sbjct: 535 DREMDLKAQISALVEKKKEMSKAETEAGDVGPMVTESDIQHIVSSWTGIPVEKVSTDESD 594
Query: 600 RLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 659
RLLKMEDTLH R+IGQ EAV+AISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA
Sbjct: 595 RLLKMEDTLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKA 654
Query: 660 LASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 719
LA+YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD
Sbjct: 655 LAAYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD 714
Query: 720 EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 779
EIEKAHPDVFNMMLQILEDGRLTDSKGRT DFKNTLLIMTSNVGSSVIEKGGRRIGFDLD
Sbjct: 715 EIEKAHPDVFNMMLQILEDGRLTDSKGRTADFKNTLLIMTSNVGSSVIEKGGRRIGFDLD 774
Query: 780 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERL 839
YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF RL
Sbjct: 775 YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFGRL 834
Query: 840 KTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIK 892
K KEIEL VTERFR+RVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAR+ K
Sbjct: 835 KNKEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLARKSK 887
>emb|CAA53077.1| clpA [Brassica napus] gi|1168972|sp|P46523|CLPA_BRANA ATP-dependent
clp protease ATP-binding subunit clpA homolog,
chloroplast precursor gi|480969|pir||S37557
endopeptidase Clp ATP-binding chain A, chloroplast -
rape (fragment)
Length = 874
Score = 1447 bits (3745), Expect = 0.0
Identities = 758/874 (86%), Positives = 803/874 (91%), Gaps = 10/874 (1%)
Query: 57 NSLDSMLRPGQDFHSKVLTQIGTNRAKGGRGSRCVTKAMFERFTEKAIKVIMLAQEEARR 116
N LD++ R Q F KV + + KG RG V KAMFERFTEKAIKVIMLAQEEARR
Sbjct: 6 NVLDTLGRSRQSFGGKVRQAMNVPKGKGSRG---VVKAMFERFTEKAIKVIMLAQEEARR 62
Query: 117 LGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTP 176
LGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTP
Sbjct: 63 LGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTP 122
Query: 177 RAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMV 236
RAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADP+NIRTQVIRMV
Sbjct: 123 RAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMV 182
Query: 237 GEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRT 296
GE + V A VG GS NKMPTLEEYGTNLTKLAEEGKLDPVVGR PQIERV QILGRRT
Sbjct: 183 GEN-NEVTANVGGGSGTNKMPTLEEYGTNLTKLAEEGKLDPVVGRHPQIERVVQILGRRT 241
Query: 297 KNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEER 356
KNNPCLIGEPGVGKTAIAEGLAQRIA+G V ET EGKKVITLDMGLL AGTKYRGEFEER
Sbjct: 242 KNNPCLIGEPGVGKTAIAEGLAQRIASGVVRETSEGKKVITLDMGLLAAGTKYRGEFEER 301
Query: 357 LKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY 416
+KKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY
Sbjct: 302 VKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEY 361
Query: 417 RKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQ 476
RKHIEKDPALERRFQPVKVPEPTV ETIQILKGLRERYEIHHKLRYTDE+LVAAA+LS+Q
Sbjct: 362 RKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQ 421
Query: 477 YISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAG 536
YISDRFLPD+AIDL+DEAGSRVRL+HAQ+PEEAR LEKE+RQI KE +EAVR Q+FEKAG
Sbjct: 422 YISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKE-NEAVRGQDFEKAG 480
Query: 537 ELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVTEVDIQHIVASWTGIPVDKVSVD 596
LRD+E++L+ ++SA+ K KEM+KAESE GD G +VTE DIQHIV+SWTGI V+KVS D
Sbjct: 481 TLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVSTD 540
Query: 597 ESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSEL 656
ESD LLKME+TLHKR+IGQ EAV+AISRAIRRARVGLKNPNRPIASFIF GPTGVGKSEL
Sbjct: 541 ESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFFGPTGVGKSEL 600
Query: 657 AKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVV 716
AKALA+YYFG EEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTE QLTEAVRRRPYTVV
Sbjct: 601 AKALAAYYFGCEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEPPQLTEAVRRRPYTVV 660
Query: 717 LFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 776
LFDEIEKAHPDVFNMMLQILEDGRLT+SKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF
Sbjct: 661 LFDEIEKAHPDVFNMMLQILEDGRLTNSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGF 720
Query: 777 DLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVF 836
DLDY EKDSSYNRIKSLVT+ELKQYFRPEFLNRLDEMI+FRQLTKLEVKEIADI+L+E+F
Sbjct: 721 DLDY-EKDSSYNRIKSLVTQELKQYFRPEFLNRLDEMILFRQLTKLEVKEIADILLQELF 779
Query: 837 ERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDS 896
ERLK KE+EL VTERF+ERVVDEGYNPSYGARPLRRAIMRLLEDSM EKMLAREIKEGDS
Sbjct: 780 ERLKKKEVELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMEEKMLAREIKEGDS 839
Query: 897 VIVDADSDGNVIVLNGSTGAP----DSLPDALPV 926
VIVD DS+G V VLNG +G P + D+LPV
Sbjct: 840 VIVDVDSEGKVTVLNGGSGTPTTSLEEQEDSLPV 873
>ref|ZP_00325035.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Trichodesmium erythraeum IMS101]
Length = 825
Score = 1254 bits (3245), Expect = 0.0
Identities = 636/818 (77%), Positives = 727/818 (88%), Gaps = 7/818 (0%)
Query: 95 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 154
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 155 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 214
+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 215 ARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGK 274
ARVLENLG D T +RTQVIRM+GE A+ T G G K PTL+E+G+NLT++A EGK
Sbjct: 121 ARVLENLGVDLTKVRTQVIRMLGETAE---VTAGGGGGRTKTPTLDEFGSNLTQMASEGK 177
Query: 275 LDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK 334
LDPVVGRQ +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIAN D+P+ +E K+
Sbjct: 178 LDPVVGRQTEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANNDIPDILEEKR 237
Query: 335 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 394
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAAN
Sbjct: 238 VVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAAN 297
Query: 395 ILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERY 454
ILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V ETI+IL GLRERY
Sbjct: 298 ILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRERY 357
Query: 455 EIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEK 514
E HHKL+ D AL AAA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+ L+K
Sbjct: 358 EQHHKLKILDTALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDK 417
Query: 515 EVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVT 574
E+R I+KEKDEAVR+Q+F+KAGELRD+EM++K++I +L + K +S D +VT
Sbjct: 418 ELRSILKEKDEAVRSQDFDKAGELRDREMEIKSEIRSLAQNKK----LDSTNEDDSPMVT 473
Query: 575 EVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLK 634
E DI HIVASWTG+PV+K++ ES++LL MEDTLH+R+IGQ EAV+A+SRAIRRARVGLK
Sbjct: 474 EEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEEAVKAVSRAIRRARVGLK 533
Query: 635 NPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 694
NPNRPIASF+FSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPG
Sbjct: 534 NPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPG 593
Query: 695 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 754
YVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNT
Sbjct: 594 YVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNT 653
Query: 755 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMI 814
L+IMTSN+GS VIEKGG +GF+ +E D+ YNRI++LV EELKQYFRPEFLNRLDE+I
Sbjct: 654 LIIMTSNIGSKVIEKGGGGLGFEFSENEADAQYNRIRNLVNEELKQYFRPEFLNRLDEII 713
Query: 815 VFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAI 874
VFRQLTK EVKEI+ I+LKEVF RL K I+L +T+RF+ER+V+EGYNPSYGARPLRRAI
Sbjct: 714 VFRQLTKDEVKEISVILLKEVFSRLTEKGIKLEITDRFQERLVEEGYNPSYGARPLRRAI 773
Query: 875 MRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNG 912
MRLLEDS+AE++LA +I EGD+ +VD G +IV G
Sbjct: 774 MRLLEDSLAEEILAGKINEGDTAVVDVGESGQIIVSKG 811
>ref|NP_681098.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus
elongatus BP-1] gi|22294028|dbj|BAC07860.1|
ATP-dependent Clp protease regulatory subunit
[Thermosynechococcus elongatus BP-1]
Length = 824
Score = 1249 bits (3231), Expect = 0.0
Identities = 640/815 (78%), Positives = 724/815 (88%), Gaps = 9/815 (1%)
Query: 95 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 154
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVL+SMG+NLKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR 60
Query: 155 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 214
+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 215 ARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGK 274
ARVLENLG D + +RTQVIRM+GE A+ T G+ K PTL+E+G NLT+LA EGK
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGETAE---VTAGASQGRTKTPTLDEFGVNLTQLAIEGK 177
Query: 275 LDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK 334
LDPVVGRQ +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIAN DVP+ +E K+
Sbjct: 178 LDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDVPDILEDKR 237
Query: 335 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 394
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAAN
Sbjct: 238 VVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAAN 297
Query: 395 ILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERY 454
ILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V ETI+IL GLRERY
Sbjct: 298 ILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERY 357
Query: 455 EIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEK 514
E HHKL+ +DEAL AAA+LS +YISDR+LPDKAIDLIDEAGSRVRL ++QLP A+ L++
Sbjct: 358 EKHHKLKISDEALEAAAKLSDRYISDRYLPDKAIDLIDEAGSRVRLINSQLPPAAKELDR 417
Query: 515 EVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNK-EMNKAESEAGDVGALV 573
E+RQ++KEKD+AVR Q F+KAGELRD+EM+LK QI A+ ++ K E+ E E +V
Sbjct: 418 ELRQVLKEKDDAVRAQNFDKAGELRDREMELKAQIRAIAQQKKAEIANGEEET----PVV 473
Query: 574 TEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGL 633
TE DI HIVASWTG+PV K++ ES++LL ME+TLH+R+IGQ EAV+AISRAIRRARVGL
Sbjct: 474 TEEDIAHIVASWTGVPVSKLTESESEKLLHMEETLHQRVIGQDEAVKAISRAIRRARVGL 533
Query: 634 KNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 693
KNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPP
Sbjct: 534 KNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPP 593
Query: 694 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 753
GYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFN++LQILEDGRLTDSKGRTVDFKN
Sbjct: 594 GYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDSKGRTVDFKN 653
Query: 754 TLLIMTSNVGSSVIEKGGRRIGFDL-DYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDE 812
TLLIMTSN+GS VIEKG +GF+ D +S YNRI+SLV EELKQYFRPEFLNRLDE
Sbjct: 654 TLLIMTSNIGSKVIEKGAAGLGFEFGTEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDE 713
Query: 813 MIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRR 872
+IVFRQLTK EVK+IADI+LKEVF RL K I L VTERF+ER++DEGYNPSYGARPLRR
Sbjct: 714 IIVFRQLTKDEVKQIADILLKEVFSRLTEKGITLEVTERFKERLIDEGYNPSYGARPLRR 773
Query: 873 AIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNV 907
AIMRLLED++AE+ML+ I+EGD+ ++D D G V
Sbjct: 774 AIMRLLEDTLAEEMLSGRIREGDTALIDVDESGQV 808
>dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120]
gi|17230491|ref|NP_487039.1| endopeptidase Clp
ATP-binding chain [Nostoc sp. PCC 7120]
gi|25289939|pir||AH2180 endopeptidase Clp ATP-binding
chain [imported] - Nostoc sp. (strain PCC 7120)
Length = 839
Score = 1244 bits (3218), Expect = 0.0
Identities = 632/816 (77%), Positives = 731/816 (89%), Gaps = 7/816 (0%)
Query: 94 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDA 153
AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKDA
Sbjct: 16 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 75
Query: 154 RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 213
R+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGV
Sbjct: 76 RIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 135
Query: 214 AARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEG 273
AARVLENLG D + +RTQVIRM+GE A+ V AT SG + K PTL+E+G+NLT++A +
Sbjct: 136 AARVLENLGVDLSKVRTQVIRMLGETAE-VSATGQSGRT--KTPTLDEFGSNLTQMATDN 192
Query: 274 KLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGK 333
KLDPVVGR +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLA RIAN DVP+ +E K
Sbjct: 193 KLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDK 252
Query: 334 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 393
+V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 253 RVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAA 312
Query: 394 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRER 453
NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V ETI+IL GLR+R
Sbjct: 313 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDR 372
Query: 454 YEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLE 513
YE HHKL+ +DEALVAAA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+ L+
Sbjct: 373 YEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKELD 432
Query: 514 KEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALV 573
KE+RQI+KEKD+AVR+Q+F++AGELRD+EM++K +I A+ + + E + +V
Sbjct: 433 KELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTEGQE----PVV 488
Query: 574 TEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGL 633
TE DI HIVASWTG+PV+K++ ES++LL MEDTLH+R+IGQ +AV+A+SRAIRRARVGL
Sbjct: 489 TEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGL 548
Query: 634 KNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 693
KNPNRPIASF+FSGPTGVGK+ELAK+LASY+FGSEEAMIRLDMSE+MERHTVSKLIGSPP
Sbjct: 549 KNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPP 608
Query: 694 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 753
GYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKN
Sbjct: 609 GYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKN 668
Query: 754 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 813
TLLI+TSN+GS VIEKGG IGF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+
Sbjct: 669 TLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEI 728
Query: 814 IVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRA 873
IVFRQL+KLEV EIADIMLKEVF RL K I L V++RF+ R+++EGY+PSYGARPLRRA
Sbjct: 729 IVFRQLSKLEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRA 788
Query: 874 IMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIV 909
IMRLLEDS+AE++L+ IK+GD ++D D +GNV V
Sbjct: 789 IMRLLEDSLAEEILSGRIKDGDVALIDIDENGNVQV 824
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/84 (42%), Positives = 59/84 (69%)
Query: 164 GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 223
G G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+++G
Sbjct: 11 GDGKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGV 70
Query: 224 DPTNIRTQVIRMVGEGADSVGATV 247
+ + R +V +++G G+ V +
Sbjct: 71 NLKDARIEVEKIIGRGSGFVAVEI 94
>ref|ZP_00163644.2| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Synechococcus elongatus PCC 7942]
Length = 839
Score = 1243 bits (3215), Expect = 0.0
Identities = 628/819 (76%), Positives = 728/819 (88%), Gaps = 7/819 (0%)
Query: 93 KAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD 152
+AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKD
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 153 ARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 212
AR+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74 ARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133
Query: 213 VAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEE 272
VAARVLENLG D + +RTQVIRM+GE A+ + G G K PTL+E+G+NLT+ A +
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGETAE---VSTGGGQGRTKTPTLDEFGSNLTQQAAD 190
Query: 273 GKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 332
GKLDPVVGRQ +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA GD+P+ +E
Sbjct: 191 GKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILED 250
Query: 333 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 392
K+V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDA
Sbjct: 251 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDA 310
Query: 393 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRE 452
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V +TI+IL+GLRE
Sbjct: 311 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRE 370
Query: 453 RYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGL 512
RYE HHKL+ DEAL AAA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+ L
Sbjct: 371 RYEQHHKLKIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKEL 430
Query: 513 EKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGAL 572
+KE+RQ++K+KD+AVR+Q+F+KAGELRD+EM++KTQI ++ + K + + D +
Sbjct: 431 DKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPI 487
Query: 573 VTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVG 632
VTE DI HIVASWTG+PV+K++ ES +LL ME+TLH R+IGQ EAV+A+SRAIRRARVG
Sbjct: 488 VTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVG 547
Query: 633 LKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 692
LKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 548 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 607
Query: 693 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 752
PGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFK
Sbjct: 608 PGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFK 667
Query: 753 NTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 811
NTL+I+TSN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLD
Sbjct: 668 NTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLD 727
Query: 812 EMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLR 871
E+IVFRQL K EVKEIADIML+EVF R+ K I LSVTE+F++R+V+EGYNPSYGARPLR
Sbjct: 728 EIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLR 787
Query: 872 RAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVL 910
RAIMRLLEDS+AE+ L+ +++EGD+ +VD +G V VL
Sbjct: 788 RAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL 826
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/85 (42%), Positives = 60/85 (70%)
Query: 163 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLG 222
R +G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+++G
Sbjct: 9 RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68
Query: 223 ADPTNIRTQVIRMVGEGADSVGATV 247
+ + R +V +++G G+ V +
Sbjct: 69 VNLKDARIEVEKIIGRGSGFVAVEI 93
>ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp.
PCC 6803] gi|1001555|dbj|BAA10182.1| ATP-dependent Clp
protease regulatory subunit [Synechocystis sp. PCC 6803]
gi|7428212|pir||S76330 endopeptidase Clp (EC 3.4.21.-)
ATP-binding chain C [similarity] - Synechocystis sp.
(strain PCC 6803)
Length = 821
Score = 1242 bits (3213), Expect = 0.0
Identities = 636/820 (77%), Positives = 727/820 (88%), Gaps = 8/820 (0%)
Query: 95 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 154
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 155 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 214
+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 215 ARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGK 274
ARVLENLG D + +RTQVIRM+GE A+ V A GSG K PTL+E+G+NLT++A EGK
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGETAE-VAAGGGSGG-RTKTPTLDEFGSNLTQMAAEGK 178
Query: 275 LDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK 334
LDPVVGRQ +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIAN D+P+ +E K+
Sbjct: 179 LDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIANKDIPDILEEKR 238
Query: 335 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 394
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q+ IIL IDEVHTLIGAGAAEGAIDAAN
Sbjct: 239 VVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDAAN 298
Query: 395 ILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERY 454
ILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V ETI+IL GLRERY
Sbjct: 299 ILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERY 358
Query: 455 EIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEK 514
E HHKL+ DEAL AAA+LS +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+ L+K
Sbjct: 359 EQHHKLKILDEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPAAKELDK 418
Query: 515 EVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVT 574
E+RQI+KEKD+AVRNQ+FE+AGEL+D+E ++K QI A+ K AE + G+ VT
Sbjct: 419 ELRQILKEKDDAVRNQDFEQAGELKDREDEIKKQIRAIASSKK----AEGDNGEPE--VT 472
Query: 575 EVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLK 634
+I HIVASWTG+PV+K++ ES++LL MEDTLH+R+IGQ +AV+A+SRAIRRARVGLK
Sbjct: 473 SEEIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLK 532
Query: 635 NPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 694
NPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSEFMERHTVSKLIGSPPG
Sbjct: 533 NPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 592
Query: 695 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 754
YVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPD+FNM+LQILEDGRLTD+KGRTVDFKNT
Sbjct: 593 YVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNT 652
Query: 755 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMI 814
LLIMTSN+GS VIEKGG +GFD D+ +S YNRI+SLV EELK YFRPEFLNRLDE+I
Sbjct: 653 LLIMTSNIGSKVIEKGGGGLGFDFADDQAESQYNRIRSLVNEELKNYFRPEFLNRLDEII 712
Query: 815 VFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAI 874
VFRQL K EVKEI++I+L++VF RL KEI L VT++F+ER+V+EG+NP+YGARPLRRAI
Sbjct: 713 VFRQLNKEEVKEISEILLRDVFARLVEKEISLQVTDKFKERIVEEGFNPAYGARPLRRAI 772
Query: 875 MRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVLNGST 914
MRLLED +AE++L+ +KEG +VD D V+V+ G T
Sbjct: 773 MRLLEDVLAEEILSGRLKEGSQALVDIGEDNQVVVIPGET 812
>ref|ZP_00162274.2| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Anabaena variabilis ATCC 29413]
Length = 839
Score = 1242 bits (3213), Expect = 0.0
Identities = 631/816 (77%), Positives = 730/816 (89%), Gaps = 7/816 (0%)
Query: 94 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDA 153
AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKDA
Sbjct: 16 AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDA 75
Query: 154 RVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGV 213
R+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGV
Sbjct: 76 RIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGV 135
Query: 214 AARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEG 273
AARVLENLG D + +RTQVIRM+GE A+ V AT SG + K PTL+E+G+NLT++A +
Sbjct: 136 AARVLENLGVDLSKVRTQVIRMLGETAE-VSATGQSGRT--KTPTLDEFGSNLTQMATDN 192
Query: 274 KLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGK 333
KLDPVVGR +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLA RIAN DVP+ +E K
Sbjct: 193 KLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIANKDVPDILEDK 252
Query: 334 KVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAA 393
+V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+Q+ +IL IDEVHTLIGAGAAEGAIDAA
Sbjct: 253 RVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAA 312
Query: 394 NILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRER 453
NILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V ETI+IL GLR+R
Sbjct: 313 NILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDR 372
Query: 454 YEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLE 513
YE HHKL+ +DEALVAAA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+ L+
Sbjct: 373 YEQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLMNSQLPPAAKELD 432
Query: 514 KEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALV 573
KE+RQI+KEKD+AVR+Q+F++AGELRD+EM++K +I A+ + + E + +V
Sbjct: 433 KELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRAIAQSKTNASGTEGQE----PVV 488
Query: 574 TEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGL 633
TE DI HIVASWTG+PV+K++ ES++LL MEDTLH+R+IGQ +AV+A+SRAIRRARVGL
Sbjct: 489 TEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGL 548
Query: 634 KNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPP 693
KNPNRPIASF+FSGPTGVGK+ELAK+LASY+FGSEEAMIRLDMSE+MERHTVSKLIGSPP
Sbjct: 549 KNPNRPIASFVFSGPTGVGKTELAKSLASYFFGSEEAMIRLDMSEYMERHTVSKLIGSPP 608
Query: 694 GYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKN 753
GYVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKN
Sbjct: 609 GYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKN 668
Query: 754 TLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEM 813
TLLI+TSN+GS VIEKGG IGF+ D+ ++ YNRI+SLV EELKQYFRPEFLNRLDE+
Sbjct: 669 TLLILTSNIGSKVIEKGGGGIGFEFSEDQTETQYNRIRSLVNEELKQYFRPEFLNRLDEI 728
Query: 814 IVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRA 873
IVFRQL+K EV EIADIMLKEVF RL K I L V++RF+ R+++EGY+PSYGARPLRRA
Sbjct: 729 IVFRQLSKAEVTEIADIMLKEVFGRLTEKGITLEVSDRFKGRLIEEGYSPSYGARPLRRA 788
Query: 874 IMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIV 909
IMRLLEDS+AE++L+ IK+GD ++D D +GNV V
Sbjct: 789 IMRLLEDSLAEEILSGRIKDGDVALIDIDDNGNVQV 824
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/84 (42%), Positives = 59/84 (69%)
Query: 164 GSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGA 223
G G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+++G
Sbjct: 11 GDGKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGV 70
Query: 224 DPTNIRTQVIRMVGEGADSVGATV 247
+ + R +V +++G G+ V +
Sbjct: 71 NLKDARIEVEKIIGRGSGFVAVEI 94
>ref|ZP_00110397.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Nostoc punctiforme PCC 73102]
Length = 822
Score = 1237 bits (3201), Expect = 0.0
Identities = 629/815 (77%), Positives = 722/815 (88%), Gaps = 7/815 (0%)
Query: 95 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDAR 154
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKDAR
Sbjct: 1 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDAR 60
Query: 155 VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVA 214
+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEGVA
Sbjct: 61 IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA 120
Query: 215 ARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEEGK 274
ARVLENLG D + +RTQVIRM+GE A+ + G S K PTL+E+G+NLT++A + K
Sbjct: 121 ARVLENLGVDLSKVRTQVIRMLGETAE---VSPGGSSGRTKTPTLDEFGSNLTQMAIDNK 177
Query: 275 LDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKK 334
LDPVVGR +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLA RIA DVP+ +E K+
Sbjct: 178 LDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRIATKDVPDILEDKR 237
Query: 335 VITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAAN 394
V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDAAN
Sbjct: 238 VVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAAN 297
Query: 395 ILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRERY 454
ILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EPTV ETI+IL GLRERY
Sbjct: 298 ILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETIEILYGLRERY 357
Query: 455 EIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEK 514
E HHKL+ +DEALVAAA+LS +YISDR+LPDKAIDL+DEAGSRVRL ++QLP A+ L+K
Sbjct: 358 EQHHKLKISDEALVAAAKLSDRYISDRYLPDKAIDLVDEAGSRVRLINSQLPPAAKELDK 417
Query: 515 EVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGALVT 574
E+RQI+KEKD+AVR+Q+F+KAGELRD+EM++K +I A+ + E E +VT
Sbjct: 418 ELRQILKEKDDAVRSQDFDKAGELRDREMEIKAEIRAIAQSKTNATGTEGEE----PVVT 473
Query: 575 EVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVGLK 634
E DI HIVASWTG+PV+K++ ES++LL MEDTLH+R+IGQ EAV A+SRAIRRARVGLK
Sbjct: 474 EEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQDEAVRAVSRAIRRARVGLK 533
Query: 635 NPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPG 694
NPNRPIASF+FSGPTGVGK+ELAK+LA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSPPG
Sbjct: 534 NPNRPIASFVFSGPTGVGKTELAKSLAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPG 593
Query: 695 YVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNT 754
YVGY EGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNM+LQILEDGRLTD+KGRTVDFKNT
Sbjct: 594 YVGYNEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMLLQILEDGRLTDAKGRTVDFKNT 653
Query: 755 LLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMI 814
LLI+TSN+GS VIEKGG IGF+ D +S+YNRI+SLV EELKQYFRPEFLNRLDE+I
Sbjct: 654 LLILTSNIGSKVIEKGGSGIGFEFSEDASESTYNRIRSLVNEELKQYFRPEFLNRLDEII 713
Query: 815 VFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLRRAI 874
VFRQL+K EV +IA+IMLKEVF RL K I L VT+RF++R++ EGY+PSYGARPLRRAI
Sbjct: 714 VFRQLSKPEVTQIAEIMLKEVFGRLTEKGITLEVTDRFKDRLIQEGYSPSYGARPLRRAI 773
Query: 875 MRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIV 909
MRLLEDS+AE++L+ IK+GD+ +VD D +G V V
Sbjct: 774 MRLLEDSLAEEILSGRIKDGDTALVDVDENGVVQV 808
>ref|YP_171963.1| ATP-dependent Clp protease regulatory subunit ClpC [Synechococcus
elongatus PCC 6301] gi|56686221|dbj|BAD79443.1|
ATP-dependent Clp protease regulatory subunit ClpC
[Synechococcus elongatus PCC 6301]
Length = 839
Score = 1236 bits (3199), Expect = 0.0
Identities = 625/819 (76%), Positives = 726/819 (88%), Gaps = 7/819 (0%)
Query: 93 KAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD 152
+AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKD
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 153 ARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 212
AR+EVEKIIGRGSGFVA EIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74 ARIEVEKIIGRGSGFVAAEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133
Query: 213 VAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEE 272
VAARVLENLG D + +RTQVIRM+GE A+ + G G K PTL+E+G+NLT+ A +
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGETAE---VSTGGGQGRTKTPTLDEFGSNLTQQAAD 190
Query: 273 GKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 332
GKLDPVVGRQ +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA GD+P+ +E
Sbjct: 191 GKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILED 250
Query: 333 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 392
K+V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ + ++IL IDEVHTLIGAGAAEGAIDA
Sbjct: 251 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGDVILVIDEVHTLIGAGAAEGAIDA 310
Query: 393 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRE 452
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV V EP+V +TI+IL+GLRE
Sbjct: 311 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRE 370
Query: 453 RYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGL 512
RYE HHKL+ DEAL AAA+L+ +YISDRFLPDKAIDLIDEAGSRVRL ++QLP A+ L
Sbjct: 371 RYEQHHKLKIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKEL 430
Query: 513 EKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGAL 572
+KE+RQ++K+KD+AVR+Q+F+KAGELRD+EM++KTQI ++ + K + + D +
Sbjct: 431 DKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPI 487
Query: 573 VTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVG 632
VTE DI HIVASWTG+PV+K++ ES +LL ME+TLH R+IGQ EAV+A+SRAIRRARVG
Sbjct: 488 VTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVG 547
Query: 633 LKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 692
LKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 548 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 607
Query: 693 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 752
PGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDV N++LQ+LEDGRLTD+KGRTVDFK
Sbjct: 608 PGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVLNLLLQLLEDGRLTDAKGRTVDFK 667
Query: 753 NTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 811
NTL+I+TSN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLD
Sbjct: 668 NTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLD 727
Query: 812 EMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLR 871
E+IVF QL K EVKEIADIML+EVF R+ K I LSVTE+F++R+V+EGYNPSYGARPLR
Sbjct: 728 EIIVFCQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLR 787
Query: 872 RAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVL 910
RAIMRLLEDS+AE+ L+ +++EGD+ +VD +G V VL
Sbjct: 788 RAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL 826
Score = 75.5 bits (184), Expect = 8e-12
Identities = 37/85 (43%), Positives = 61/85 (71%)
Query: 163 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLG 222
R +G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+++G
Sbjct: 9 RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68
Query: 223 ADPTNIRTQVIRMVGEGADSVGATV 247
+ + R +V +++G G+ V A +
Sbjct: 69 VNLKDARIEVEKIIGRGSGFVAAEI 93
>pir||S71553 endopeptidase Clp (EC 3.4.21.-) ATP-binding chain clpC [similarity]
- Synechococcus sp. (strain PCC 7942)
gi|755163|gb|AAB67745.1| ClpC
Length = 839
Score = 1236 bits (3197), Expect = 0.0
Identities = 625/819 (76%), Positives = 726/819 (88%), Gaps = 7/819 (0%)
Query: 93 KAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKD 152
+AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTG+AAKVLKSMG+NLKD
Sbjct: 14 EAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKD 73
Query: 153 ARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEG 212
AR+EVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIG+EHLLLGL+REGEG
Sbjct: 74 ARIEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEG 133
Query: 213 VAARVLENLGADPTNIRTQVIRMVGEGADSVGATVGSGSSNNKMPTLEEYGTNLTKLAEE 272
VAARVLENLG D + +RTQVIRM+GE A+ + G G K PTL+E+G+NLT+ A +
Sbjct: 134 VAARVLENLGVDLSKVRTQVIRMLGETAE---VSTGGGQGRTKTPTLDEFGSNLTQQAAD 190
Query: 273 GKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEG 332
GKLDPVVGRQ +IERV QILGRRTKNNP LIGEPGVGKTAIAEGLAQRIA GD+P+ +E
Sbjct: 191 GKLDPVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILED 250
Query: 333 KKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDA 392
K+V+TLD+GLLVAGTKYRGEFEERLKK+M+EI+ + +IL IDEVHTLIGAGAAEGAIDA
Sbjct: 251 KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDA 310
Query: 393 ANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVPETIQILKGLRE 452
ANILKPALARGELQCIGATTLDEYRKHIE+D ALERRFQPV + EP+V +TI+IL+GLRE
Sbjct: 311 ANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMLGEPSVDDTIEILRGLRE 370
Query: 453 RYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGL 512
RYE HHKL+ DEAL AAA+L+ +YISD FLPDKAIDLIDEAGSRVRL ++QL A+ L
Sbjct: 371 RYEQHHKLKIADEALEAAAKLADRYISDLFLPDKAIDLIDEAGSRVRLMNSQLAPAAKEL 430
Query: 513 EKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALIEKNKEMNKAESEAGDVGAL 572
+KE+RQ++K+KD+AVR+Q+F+KAGELRD+EM++KTQI ++ + K + + D +
Sbjct: 431 DKELRQVLKDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSST---DDSPI 487
Query: 573 VTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRIIGQHEAVEAISRAIRRARVG 632
VTE DI HIVASWTG+PV+K++ ES +LL ME+TLH R+IGQ EAV+A+SRAIRRARVG
Sbjct: 488 VTEEDIAHIVASWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVG 547
Query: 633 LKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMIRLDMSEFMERHTVSKLIGSP 692
LKNPNRPIASFIFSGPTGVGK+EL KALA+Y+FGSEEAMIRLDMSE+MERHTVSKLIGSP
Sbjct: 548 LKNPNRPIASFIFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSP 607
Query: 693 PGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFK 752
PGYVGY EGGQLTEAVRRRPYTVVL DEIEKAHPDVFN++LQ+LEDGRLTD+KGRTVDFK
Sbjct: 608 PGYVGYNEGGQLTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFK 667
Query: 753 NTLLIMTSNVGSSVIEKGGRRIGFDLD-YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLD 811
NTL+I+TSN+GS VIEKGG +GF+ DE ++ YNRI+SLV EELKQYFRPEFLNRLD
Sbjct: 668 NTLIILTSNIGSKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLD 727
Query: 812 EMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERFRERVVDEGYNPSYGARPLR 871
E+IVFRQL K EVKEIADIML+EVF R+ K I LSVTE+F++R+V+EGYNPSYGARPLR
Sbjct: 728 EIIVFRQLNKEEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLR 787
Query: 872 RAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVL 910
RAIMRLLEDS+AE+ L+ +++EGD+ +VD +G V VL
Sbjct: 788 RAIMRLLEDSLAEEFLSGKLREGDTAVVDIGEEGKVQVL 826
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/85 (42%), Positives = 60/85 (70%)
Query: 163 RGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLG 222
R +G A+ FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG GVAA+VL+++G
Sbjct: 9 RHAGREAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMG 68
Query: 223 ADPTNIRTQVIRMVGEGADSVGATV 247
+ + R +V +++G G+ V +
Sbjct: 69 VNLKDARIEVEKIIGRGSGFVAVEI 93
>gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa (japonica
cultivar-group)]
Length = 932
Score = 1234 bits (3194), Expect = 0.0
Identities = 634/855 (74%), Positives = 739/855 (86%), Gaps = 11/855 (1%)
Query: 81 RAKGG----RGSRCVTKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGT 136
RA GG RG+R V + F+ FT+KAIK IM+AQEEARRLGH+ G+EQ+LLG+IGEGT
Sbjct: 80 RASGGGGRRRGARVVARMGFDMFTDKAIKAIMMAQEEARRLGHHAAGSEQLLLGVIGEGT 139
Query: 137 GIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNY 196
GI AKVL+ G++LK AR EVEK+ GRG G V +EI FTP AK VL+ S EEA QLGHNY
Sbjct: 140 GIGAKVLRGAGLSLKAARAEVEKMAGRGPGMVPMEIKFTPAAKNVLQASQEEAHQLGHNY 199
Query: 197 IGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEGADS---VGATVGSGSSN 253
+GSEHLLLGLLRE G A VL+N ADP+NIR++VIRM+ + ++ V A VG GSS
Sbjct: 200 VGSEHLLLGLLRE-HGAALVVLKNFQADPSNIRSEVIRMISDTSEDHQPVSAAVGGGSST 258
Query: 254 NKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAI 313
K+PTL EYGTNLTKLAEEGKLDPVVGRQ Q++RV QILGRRTKNNPCLIGEPGVGKTAI
Sbjct: 259 TKIPTLLEYGTNLTKLAEEGKLDPVVGRQNQVDRVVQILGRRTKNNPCLIGEPGVGKTAI 318
Query: 314 AEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILF 373
AEGLAQRIA G+VPETI+GK VITLDMGLLVAGTKYRGEFEERLKKLM+E+KQ+ EIILF
Sbjct: 319 AEGLAQRIAAGNVPETIDGKTVITLDMGLLVAGTKYRGEFEERLKKLMDEVKQNGEIILF 378
Query: 374 IDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPV 433
+DEVHTL+GAGAAEGAIDAANILKPALARGELQCIGATT+DEYRKHIEKDPALERRFQPV
Sbjct: 379 LDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEKDPALERRFQPV 438
Query: 434 KVPEPTVPETIQILKGLRERYEIHHKLRYTDEALVAAAELSHQYISDRFLPDKAIDLIDE 493
KVPEPTV ETI ILKGLRERYEIHHK++YTDE+L+AAA LS+QYISDRFLPDKAIDL+DE
Sbjct: 439 KVPEPTVDETIGILKGLRERYEIHHKVQYTDESLIAAARLSYQYISDRFLPDKAIDLVDE 498
Query: 494 AGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELRDKEMDLKTQISALI 553
AGS VRL++AQLP+EA+ LEK++++I+ EK EA+R+Q+FEKAG LR +E++LK++I +L+
Sbjct: 499 AGSLVRLRNAQLPDEAKELEKKLKKIMAEKSEAIRSQDFEKAGALRGEEVELKSEIMSLV 558
Query: 554 EKNKEMNKAESEAGD-VGALVTEVDIQHIVASWTGIPVDKVSVDESDRLLKMEDTLHKRI 612
+K+KEM+KA ++G+ G VTE D+QHIV+SWTG+PV+KV+VDES RLL ME +LH+RI
Sbjct: 559 DKSKEMSKAAVDSGESPGPTVTEADVQHIVSSWTGVPVEKVTVDESSRLLAMESSLHRRI 618
Query: 613 IGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYYFGSEEAMI 672
+GQ EAV AISRAIRRARVGL++P RPIASFIF+GPTGVGKSELAKALA+YY+GS EAM+
Sbjct: 619 VGQDEAVTAISRAIRRARVGLRDPRRPIASFIFAGPTGVGKSELAKALAAYYYGSPEAMV 678
Query: 673 RLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMM 732
RLDMSEFME+HTV+KL+GSPPGYVGY EGGQLTEA+RRRPY VVLFDE+EKAHPDVFNMM
Sbjct: 679 RLDMSEFMEKHTVAKLVGSPPGYVGYAEGGQLTEAIRRRPYAVVLFDEVEKAHPDVFNMM 738
Query: 733 LQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKS 792
LQIL+DGRLTDSKGRTVDFKN+L+IMTSNVGS VIEKGGR++GF D D Y IK+
Sbjct: 739 LQILDDGRLTDSKGRTVDFKNSLIIMTSNVGSGVIEKGGRQLGFAGD-GSGDGGYGVIKN 797
Query: 793 LVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEIELSVTERF 852
+V EE+K+YFRPEFLNRLDEMIVFRQLTKLEVKEIA IML EV R+ K I L VTERF
Sbjct: 798 MVEEEMKRYFRPEFLNRLDEMIVFRQLTKLEVKEIAGIMLAEVTGRIGGKGIGLQVTERF 857
Query: 853 RERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDADSDGNVIVL-N 911
+E VV++G++PSYGARPLRRAIMRLLED++ +KMLA EI GDSVIVDAD DGNV+V+
Sbjct: 858 KELVVEQGFDPSYGARPLRRAIMRLLEDTLTDKMLAGEICAGDSVIVDADGDGNVVVVGR 917
Query: 912 GSTGAPDSLPDALPV 926
S G PD A V
Sbjct: 918 RSAGLPDLKSPAFTV 932
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.136 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,485,531,638
Number of Sequences: 2540612
Number of extensions: 64203426
Number of successful extensions: 267468
Number of sequences better than 10.0: 3709
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 2605
Number of HSP's that attempted gapping in prelim test: 256193
Number of HSP's gapped (non-prelim): 8443
length of query: 926
length of database: 863,360,394
effective HSP length: 137
effective length of query: 789
effective length of database: 515,296,550
effective search space: 406568977950
effective search space used: 406568977950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)
Medicago: description of AC126794.6