BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126787.10 - phase: 0
(306 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB78794.1| putative protein [Arabidopsis thaliana] gi|28946... 207 3e-52
dbj|BAB08909.1| unnamed protein product [Arabidopsis thaliana] g... 163 5e-39
ref|XP_450948.1| RING-H2 zinc finger protein ATL6-like [Oryza sa... 140 4e-32
gb|AAV43794.1| At2g35000 [Arabidopsis thaliana] gi|52627087|gb|A... 140 4e-32
emb|CAD40832.2| OSJNBa0086B14.4 [Oryza sativa (japonica cultivar... 129 1e-28
gb|AAT06451.1| At2g35420 [Arabidopsis thaliana] gi|42569636|ref|... 127 5e-28
gb|AAC36179.1| unknown protein [Arabidopsis thaliana] gi|2540837... 126 7e-28
ref|NP_174766.1| zinc finger (C3HC4-type RING finger) family pro... 126 7e-28
gb|AAO45753.1| RING/C3HC4/PHD zinc finger-like protein [Cucumis ... 126 9e-28
dbj|BAD36097.1| putative RING-H2 zinc finger protein [Oryza sati... 124 3e-27
ref|XP_483020.1| putative RING-H2 zinc finger protein [Oryza sat... 116 7e-25
gb|AAY78717.1| zinc finger (C3HC4-type RING finger) family prote... 116 9e-25
gb|AAF27026.1| putative RING-H2 zinc finger protein ATL6 [Arabid... 115 2e-24
gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabid... 115 2e-24
gb|AAW38988.1| At1g72200 [Arabidopsis thaliana] gi|15218389|ref|... 114 5e-24
gb|AAO42269.1| putative RING-H2 zinc finger protein ATL3 [Arabid... 114 5e-24
ref|NP_198094.1| zinc finger (C3HC4-type RING finger) family pro... 112 1e-23
gb|AAM60957.1| RING-H2 zinc finger protein-like [Arabidopsis tha... 112 2e-23
ref|NP_912558.1| Hypothetical protein [Oryza sativa (japonica cu... 108 1e-22
ref|XP_466364.1| putative RING-H2 zinc finger protein ATL6 [Oryz... 105 1e-21
>emb|CAB78794.1| putative protein [Arabidopsis thaliana] gi|2894601|emb|CAA17135.1|
putative protein [Arabidopsis thaliana]
gi|15236701|ref|NP_193526.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
gi|7459592|pir||T05078 hypothetical protein T6K21.100 -
Arabidopsis thaliana
Length = 289
Score = 207 bits (527), Expect = 3e-52
Identities = 121/280 (43%), Positives = 149/280 (53%), Gaps = 28/280 (10%)
Query: 6 PKYDTPPAPTYKTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLV 65
P PP Y TPP V T+ +L+ F+ F +Y CK W L G V
Sbjct: 8 PLAPQPPQQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHH--GGDTV 65
Query: 66 RLSPDRSPSR-----GLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLR 120
+P + P GL+ ++ FPTF YSSVKDLR+EK Y LECAICLLEFD D +LR
Sbjct: 66 SDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEK-YGLECAICLLEFDGDHVLR 124
Query: 121 LLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMT 180
LLT C HVFHQECIDLW ESH+TCPVCR DLD PP N + +
Sbjct: 125 LLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPE---------------NTKPTVD 169
Query: 181 SLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIV 240
+ D I EE D+ + T Q+ + +Q +FSRSHSTGHSIV
Sbjct: 170 EMIIDVIQETSDDEEDDHHRQQTTTQIDTWPSSGQTSSIKKEQNLPEKFSRSHSTGHSIV 229
Query: 241 TIRGEEKDHEKYTLRLPEHV---IRGGHNYTRSCTNYNEM 277
+ EE+D KYTLRLPEHV + GH+ T SC + E+
Sbjct: 230 RNKPEEED--KYTLRLPEHVKIKVTRGHSQTESCVTFAEL 267
>dbj|BAB08909.1| unnamed protein product [Arabidopsis thaliana]
gi|15237483|ref|NP_199477.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
Length = 289
Score = 163 bits (413), Expect = 5e-39
Identities = 100/277 (36%), Positives = 152/277 (54%), Gaps = 36/277 (12%)
Query: 12 PAPTYKTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDR 71
P Y PP ++ T+ +L++ F+ F +Y CK + W ++ +
Sbjct: 16 PPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQAQQ 75
Query: 72 SPSR-----GLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDS-MLRLLTIC 125
P + GL+ +++ +P F +SSVKDLR++K Y LECAICLLEF+++ +LRLLT C
Sbjct: 76 EPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDK-YGLECAICLLEFEEEHILLRLLTTC 134
Query: 126 CHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCD 185
HVFHQECID WLES+KTCPVCR +LD PN N++E + + +
Sbjct: 135 YHVFHQECIDQWLESNKTCPVCRRNLD--PNAPE--------------NIKELIIEVIQE 178
Query: 186 DIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGE 245
+ H + E++ E+ ++ G+ ++ D +FSRS +TGHSIV + E
Sbjct: 179 NAHENRDQEQTSTSNEVMLSRQSSGNNE-----RKIETLPD-KFSRSKTTGHSIVRNKPE 232
Query: 246 EKDHEKYTLRLPEHV-----IRGGHNYTRSCTNYNEM 277
E+D +YTLRLP+HV R +N T SC ++ E+
Sbjct: 233 EED--RYTLRLPDHVKIKVTRRHNNNQTESCISFGEL 267
>ref|XP_450948.1| RING-H2 zinc finger protein ATL6-like [Oryza sativa (japonica
cultivar-group)] gi|47497675|dbj|BAD19742.1| RING-H2
zinc finger protein ATL6-like [Oryza sativa (japonica
cultivar-group)]
Length = 392
Score = 140 bits (354), Expect = 4e-32
Identities = 94/278 (33%), Positives = 133/278 (47%), Gaps = 27/278 (9%)
Query: 2 SSSEPKYDTPPAPTYKT---PPALVAFTLTVLILCFVAFSVVYVCKYCFAGF--FHTWAL 56
++++P D PPA Y T P + + + F+ F +YV ++C+ G + T L
Sbjct: 25 AAAQPSQDNPPAGYYATNFSPSMAIVIVVLIAAFFFLGFFSIYV-RHCYGGRGDYSTTPL 83
Query: 57 QRTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDD 116
R+ + R RGLD ++L FPT Y+ VK + K +LECA+C+ EFDDD
Sbjct: 84 PRSGAARSRR-------QRGLDQSVLATFPTMAYADVKAHKSVKG-ALECAVCISEFDDD 135
Query: 117 SMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDL----DSP--------PNQMSKHGEG 164
LRLL C HVFHQ+CID WL SH TCPVCR +L P P + EG
Sbjct: 136 ETLRLLPKCSHVFHQDCIDTWLASHATCPVCRANLVDGASEPASDVAAELPTAPAPRPEG 195
Query: 165 NHNNNNNNLNVQEGMTSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQ 224
+ E + + IDV E + + A++ + +
Sbjct: 196 -ATPSEAAAPGGEAPAAAAAAAVVIDVEETEEERIIREEAAELTRIGSLKRALRSKSGRA 254
Query: 225 EDHRFSRSHSTGHSIVTIRGEEKDHEKYTLRLPEHVIR 262
RF RSHSTGHS+ + E++TLRLPEHV+R
Sbjct: 255 PAARFPRSHSTGHSLSSSAAASAGAERFTLRLPEHVLR 292
>gb|AAV43794.1| At2g35000 [Arabidopsis thaliana] gi|52627087|gb|AAU84670.1|
At2g35000 [Arabidopsis thaliana]
gi|3033395|gb|AAC12839.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|66865924|gb|AAY57596.1| RING finger family protein
[Arabidopsis thaliana] gi|7485807|pir||T00481 probable
RING zinc finger protein [imported] - Arabidopsis
thaliana gi|15226874|ref|NP_181045.1| zinc finger
(C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 378
Score = 140 bits (354), Expect = 4e-32
Identities = 89/263 (33%), Positives = 136/263 (50%), Gaps = 28/263 (10%)
Query: 10 TPPAPTYKTP--PALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGS---L 64
TPP T P P +V T+ L++ F+ F ++ C+ A F + + T + + +
Sbjct: 38 TPPGTTKTKPNDPVVVVITVLFLVIFFMVFGSIF-CRRSNAQFSRSSIFRSTDADAESQV 96
Query: 65 VRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTI 124
VR+ R +RGLD +E FPTFLYS VK +R K +ECA+CL EF+DD LRL+
Sbjct: 97 VRIR--RLTARGLDAEAIETFPTFLYSEVKAVRIGKG-GVECAVCLCEFEDDETLRLMPP 153
Query: 125 CCHVFHQECIDLWLESHKTCPVCRTDL-----DSPPNQMSKHGEGNHNNNNNNLNVQEGM 179
CCHVFH +C+D+WL H TCP+CR DL + + + +++ + + GM
Sbjct: 154 CCHVFHADCVDVWLSEHSTCPLCRADLVLNQQGDDDDSTESYSGTDPGTISSSTDPERGM 213
Query: 180 TSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSI 239
D +D + N+ +++ G+S Q F RSHSTGHS+
Sbjct: 214 VLESSDAHLLDAVTWSNSNITPRSKS-----------TGLSSWQITGILFPRSHSTGHSL 262
Query: 240 VTIRGEEKDHEKYTLRLPEHVIR 262
+ G + +++TLRLP+ V R
Sbjct: 263 IQPAG---NLDRFTLRLPDDVRR 282
>emb|CAD40832.2| OSJNBa0086B14.4 [Oryza sativa (japonica cultivar-group)]
gi|50924608|ref|XP_472662.1| OSJNBa0086B14.4 [Oryza
sativa (japonica cultivar-group)]
Length = 387
Score = 129 bits (324), Expect = 1e-28
Identities = 96/274 (35%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 2 SSSEPKYDTPPAPTYK--TP---PALVAFTLTVLILCFVAFSVVYV--CKYCFAGFFHTW 54
SS+ P T APT + TP T+++ + F+ F Y+ C+ AG
Sbjct: 25 SSASPAPATSQAPTVRQQTPFGRTMSTVITVSISVFFFLLFFCAYINQCRLAEAG--DAR 82
Query: 55 ALQRTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFD 114
A +G P R RGLD ++ FP Y V + KS LECA+CL FD
Sbjct: 83 AAAAAAAGGGAGGGPSRRGKRGLDPAVVATFPIVPYREVVKHKIGKSV-LECAVCLTSFD 141
Query: 115 DDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLN 174
D LRLL C H FH ECID WLES TCP+CR +L+ PP + + +
Sbjct: 142 DGDDLRLLPHCSHAFHPECIDPWLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSPERS 201
Query: 175 VQEGMTSLPCDDIH---IDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDH--RF 229
+ + P H I V EE D+ E D+ + V + M + E R
Sbjct: 202 PRCQPSPPPPPPPHALVIPVEDEEDDS---------DEDDRKEEAVELEMLRSERRAARL 252
Query: 230 SRSHSTGHSIVT---IRGEEKDHEKYTLRLPEHV 260
RSHSTGHS+V E DHE++TLRLP+HV
Sbjct: 253 PRSHSTGHSLVASAAAAAESGDHERFTLRLPQHV 286
>gb|AAT06451.1| At2g35420 [Arabidopsis thaliana] gi|42569636|ref|NP_181085.2| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana]
Length = 254
Score = 127 bits (318), Expect = 5e-28
Identities = 90/281 (32%), Positives = 127/281 (45%), Gaps = 56/281 (19%)
Query: 3 SSEPKYDTPPAPTY---KTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRT 59
SS D+ PA + P V T +L + F F +++ ++ F TW LQRT
Sbjct: 2 SSTTSIDSIPATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRT 61
Query: 60 TSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSML 119
G L+ ++ + GLD ++ FP F YSS +K++ ECAICL EF D+ +
Sbjct: 62 PYGDLIHVATPPE-NTGLDPFIIRSFPVFHYSSAT----KKNHGTECAICLSEFSDEDTV 116
Query: 120 RLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGM 179
RL+T+C H FH CIDLW E HKTCPVCR +LD P + G G
Sbjct: 117 RLITVCRHPFHSNCIDLWFELHKTCPVCRCELD--PGMI---GSG--------------- 156
Query: 180 TSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQ--QQEDHRFSRSHSTGH 237
R E N IT ++ +++ G S + + RFSRSHSTGH
Sbjct: 157 ------------RLESFHNTVTITIQDINHDEENPPTAGSSKRLIEASAWRFSRSHSTGH 204
Query: 238 SIV-TIRGEEKDHEKYTLRLPEHVIRGGHNYTRSCTNYNEM 277
+V T K + H T SC +++E+
Sbjct: 205 FMVKTTDANVKSKRR-------------HYQTGSCVSFDEL 232
>gb|AAC36179.1| unknown protein [Arabidopsis thaliana] gi|25408377|pir||D84768
hypothetical protein At2g35420 [imported] - Arabidopsis
thaliana
Length = 234
Score = 126 bits (317), Expect = 7e-28
Identities = 85/261 (32%), Positives = 120/261 (45%), Gaps = 53/261 (20%)
Query: 20 PALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSPSRGLDN 79
P V T +L + F F +++ ++ F TW LQRT G L+ ++ + GLD
Sbjct: 2 PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVATPPE-NTGLDP 60
Query: 80 TLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLE 139
++ FP F YSS +K++ ECAICL EF D+ +RL+T+C H FH CIDLW E
Sbjct: 61 FIIRSFPVFHYSSAT----KKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFE 116
Query: 140 SHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGEESDNV 199
HKTCPVCR +LD P + G G R E N
Sbjct: 117 LHKTCPVCRCELD--PGMI---GSG---------------------------RLESFHNT 144
Query: 200 GEITRAQVHEGDQHDHHVGMSMQ--QQEDHRFSRSHSTGHSIV-TIRGEEKDHEKYTLRL 256
IT ++ +++ G S + + RFSRSHSTGH +V T K +
Sbjct: 145 VTITIQDINHDEENPPTAGSSKRLIEASAWRFSRSHSTGHFMVKTTDANVKSKRR----- 199
Query: 257 PEHVIRGGHNYTRSCTNYNEM 277
H T SC +++E+
Sbjct: 200 --------HYQTGSCVSFDEL 212
>ref|NP_174766.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana] gi|12322941|gb|AAG51457.1| RING zinc finger
protein, putative [Arabidopsis thaliana]
gi|25403229|pir||D86474 probable RING zinc finger
protein [imported] - Arabidopsis thaliana
Length = 327
Score = 126 bits (317), Expect = 7e-28
Identities = 92/265 (34%), Positives = 127/265 (47%), Gaps = 22/265 (8%)
Query: 5 EPKYDTPPAPTYK---TPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTS 61
+P+ PP + P ++A + L+ +A V Y KY T + T
Sbjct: 29 QPRTTAPPYIAQRPNQVPAVIIAMLMFTLLFSMLACCVCY--KYTNTSPHGTSS--DTEE 84
Query: 62 GSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRL 121
G ++ R SRGL ++ FP+FLYS VK L+ K +ECAICL EF+D+ LRL
Sbjct: 85 GGHGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKG-GVECAICLNEFEDEETLRL 143
Query: 122 LTICCHVFHQECIDLWLESHKTCPVCRTDLDSPP----NQMSKHGEGNHNNNNNNLNVQE 177
+ C H FH CID+WL S TCPVCR L P N + + N + + NV
Sbjct: 144 MPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQDMDLENVTA 203
Query: 178 GMTSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGH 237
+ L D+ + R S+N G T G+S + + F RSHSTGH
Sbjct: 204 RRSVLESPDVRLLDRLSWSNNTGANT-------PPRSRSTGLSNWRITELLFPRSHSTGH 256
Query: 238 SIVTIRGEEKDHEKYTLRLPEHVIR 262
S+V R E D ++TL+LPE V R
Sbjct: 257 SLVP-RVENLD--RFTLQLPEEVRR 278
>gb|AAO45753.1| RING/C3HC4/PHD zinc finger-like protein [Cucumis melo]
Length = 379
Score = 126 bits (316), Expect = 9e-28
Identities = 91/271 (33%), Positives = 130/271 (47%), Gaps = 47/271 (17%)
Query: 12 PAPTYKTPP--------ALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGS 63
PAP ++ P V + + L F+AF VY+ ++C +T +G
Sbjct: 30 PAPDPRSDPYQYRLSGSMAVIIVILIAALFFMAFFSVYI-RHCNDSPSNTVRPITAAAGR 88
Query: 64 LVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLT 123
R +RGLD ++E FPT +YS VK+ + KS +LECA+CL EF+DD LRL+
Sbjct: 89 ------SRRATRGLDPAVIETFPTLIYSDVKEHKIGKS-ALECAVCLNEFEDDETLRLIP 141
Query: 124 ICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLP 183
C HVFH ECID WL SH TCPVCR +L P + H +++N V
Sbjct: 142 KCDHVFHPECIDAWLASHSTCPVCRANLSPQPT------DSVHRADDSNAVVNS------ 189
Query: 184 CDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHR--------------F 229
D D+ + +D V E T + Q + + + + +R F
Sbjct: 190 -DTDGGDIEAQSNDVVSETTAPPTVQ-IQTESELSTTTSNKALNRTRTRGSRSNRLRWLF 247
Query: 230 SRSHSTGHSIVTIRGEEKDHEKYTLRLPEHV 260
RSHSTGHS+V +D E++TLRLP +
Sbjct: 248 PRSHSTGHSLVQ---PGEDTERFTLRLPVEI 275
>dbj|BAD36097.1| putative RING-H2 zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 442
Score = 124 bits (312), Expect = 3e-27
Identities = 88/253 (34%), Positives = 123/253 (47%), Gaps = 15/253 (5%)
Query: 13 APTYKTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRS 72
+P++ P ++ L + F+ F +Y+ + C + +L R
Sbjct: 62 SPSFSAPMVVLLVAL-IAAFFFIGFFSIYI-RRCGGEASTGPTIPAAALAALSRQEQRSR 119
Query: 73 PSRGLDNTLLEKFPTFLYSSVKDLRKE-KSYSLECAICLLEFDDDSMLRLLTICCHVFHQ 131
RGLD ++E FPT Y+ ++LR K LECA+CL EFDDD LRLL C H FH
Sbjct: 120 RQRGLDPAVVESFPTMKYAEARELRDGGKDAVLECAVCLSEFDDDEELRLLPKCSHAFHP 179
Query: 132 ECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDV 191
+CI WL H TCPVCR +L P+ + E N + + QE + D +D
Sbjct: 180 DCIGEWLAGHVTCPVCRCNL--APDAAA--AEANVVSGEVDGEQQEEEVVVAID---VDR 232
Query: 192 RGEESDNVGEITRAQVHEGDQ-HDHHVGMSMQQQEDHRFSRSHSTGHSIVTIR-GEEKDH 249
GEE D E R + E ++ + + RSHSTGHS+ T R G+ D
Sbjct: 233 EGEEED---EERRREAMELERIGSQRRAVRSRSGRPLPLPRSHSTGHSLATTRLGDAGDL 289
Query: 250 EKYTLRLPEHVIR 262
E++TLRLPEHV R
Sbjct: 290 ERFTLRLPEHVRR 302
>ref|XP_483020.1| putative RING-H2 zinc finger protein [Oryza sativa (japonica
cultivar-group)] gi|42409391|dbj|BAD10704.1| putative
RING-H2 zinc finger protein [Oryza sativa (japonica
cultivar-group)] gi|42408167|dbj|BAD09305.1| putative
RING-H2 zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 413
Score = 116 bits (291), Expect = 7e-25
Identities = 89/283 (31%), Positives = 124/283 (43%), Gaps = 47/283 (16%)
Query: 12 PAPTYKTPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSL------- 64
P P Y P + V+++ AF F GFF + ++R G L
Sbjct: 41 PGPNYFNPKSFNPSMAVVIVVLVTAFF--------FLGFFSIY-IRRCAGGPLGGPGGYG 91
Query: 65 ------------VRLSPDRSPS-RGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLL 111
+ RS RGLD +L FPT Y+ VK + K +LECA+CL
Sbjct: 92 VGGGGGGRVGGGFTFAAARSRRVRGLDPAVLGAFPTMAYADVKAHKAGKG-ALECAVCLS 150
Query: 112 EFDDDSMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLD-----SPPNQMSKHGEGNH 166
EFDDD LRLL C H FH +CID WL SH TCPVCR +L PP H
Sbjct: 151 EFDDDETLRLLPRCSHAFHADCIDAWLASHVTCPVCRANLAFDAGVPPPPLAPPHA---- 206
Query: 167 NNNNNNLNVQEGMTSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQED 226
++ + P + + +DV +++ E R + V +++ +
Sbjct: 207 LTTGQDVAAAPPQPAAP-EQVTVDVVVADAEETEERIRREEAAELMRIGSVKRALRSKSG 265
Query: 227 HR---FSRSHSTGHSIVTIRG----EEKDHEKYTLRLPEHVIR 262
R F RSH+TGHS+ + E+YTLRLP+HV+R
Sbjct: 266 RRPPQFPRSHTTGHSLAAAAAVPATADDAAERYTLRLPDHVLR 308
>gb|AAY78717.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana] gi|3033394|gb|AAC12838.1| putative RING zinc
finger protein [Arabidopsis thaliana]
gi|15226873|ref|NP_181044.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
gi|7459591|pir||T00480 probable RING zinc finger protein
At2g34990 [imported] - Arabidopsis thaliana
Length = 302
Score = 116 bits (290), Expect = 9e-25
Identities = 80/241 (33%), Positives = 113/241 (46%), Gaps = 33/241 (13%)
Query: 26 TLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTS---GSLVRLSPDRSPSRGLDNTLL 82
TL V+ + A +V + CF + Q + + S V + RGLD ++
Sbjct: 14 TLLVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSITAVRGLDEAII 73
Query: 83 EKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECIDLWLESHK 142
FPTFLYS VK+ R+ +ECA+C+ EF+D LRL+ CCHVFH +C+ +WL H
Sbjct: 74 NSFPTFLYSEVKE-RRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHS 132
Query: 143 TCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGEESDNVGEI 202
TCP+CR DL P GE ++ N P D+ D V
Sbjct: 133 TCPLCRVDLCLQP------GERSYLN--------------PEPDLVESTNSHLFDGVTWT 172
Query: 203 TRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGEEKDH-EKYTLRLPEHVI 261
R + +S + SRSHSTGHS+V + D+ +++TLRLPE V
Sbjct: 173 NRNR----PSRSWSTRLSQCRVSQILISRSHSTGHSVV----QPLDNLDRFTLRLPEEVR 224
Query: 262 R 262
R
Sbjct: 225 R 225
>gb|AAF27026.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
Length = 392
Score = 115 bits (288), Expect = 2e-24
Identities = 92/264 (34%), Positives = 128/264 (47%), Gaps = 34/264 (12%)
Query: 2 SSSEPKYDTPPAPTYKTPPAL-VAFTLTVLILCFVAFSVVYVCKYCF----AGFFHTWAL 56
S S+P P + PA+ V + + L F+ F +Y ++C AG
Sbjct: 23 SQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYF-RHCSGVPDAGV------ 75
Query: 57 QRTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDD 116
+ +G + + +RGLD +++E FPTFLYS VK + K LECAICL EF+DD
Sbjct: 76 --SPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKG-ELECAICLNEFEDD 132
Query: 117 SMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQ 176
LRLL C HVFH CID WLE+H TCPVCR +L + GE +V+
Sbjct: 133 ETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL----AEQVAEGE----------SVE 178
Query: 177 EGMTSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTG 236
G T P ++ V E + V G+ + + +FSRSH+TG
Sbjct: 179 PGGTE-PDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKR-VKFSRSHTTG 236
Query: 237 HSIVTIRGEEKDHEKYTLRLPEHV 260
HS+V + E++TLRLPE V
Sbjct: 237 HSVVQ---PGECTERFTLRLPEDV 257
>gb|AAL86301.1| putative RING-H2 zinc finger protein ATL6 [Arabidopsis thaliana]
Length = 388
Score = 115 bits (288), Expect = 2e-24
Identities = 92/264 (34%), Positives = 128/264 (47%), Gaps = 34/264 (12%)
Query: 2 SSSEPKYDTPPAPTYKTPPAL-VAFTLTVLILCFVAFSVVYVCKYCF----AGFFHTWAL 56
S S+P P + PA+ V + + L F+ F +Y ++C AG
Sbjct: 29 SQSQPGPTNQPYNYGRLSPAMAVIVVILIAALFFMGFFSIYF-RHCSGVPDAGV------ 81
Query: 57 QRTTSGSLVRLSPDRSPSRGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDD 116
+ +G + + +RGLD +++E FPTFLYS VK + K LECAICL EF+DD
Sbjct: 82 --SPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKG-ELECAICLNEFEDD 138
Query: 117 SMLRLLTICCHVFHQECIDLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQ 176
LRLL C HVFH CID WLE+H TCPVCR +L + GE +V+
Sbjct: 139 ETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL----AEQVAEGE----------SVE 184
Query: 177 EGMTSLPCDDIHIDVRGEESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTG 236
G T P ++ V E + V G+ + + +FSRSH+TG
Sbjct: 185 PGGTE-PDLELQQVVVNPEPVVTAPVPEQLVTSEVDSRRLPGVPVDLKR-VKFSRSHTTG 242
Query: 237 HSIVTIRGEEKDHEKYTLRLPEHV 260
HS+V + E++TLRLPE V
Sbjct: 243 HSVVQ---PGECTERFTLRLPEDV 263
>gb|AAW38988.1| At1g72200 [Arabidopsis thaliana] gi|15218389|ref|NP_177365.1| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana] gi|12323662|gb|AAG51795.1|
RING-H2 zinc finger protein ATL3, putative; 35094-33880
[Arabidopsis thaliana] gi|25406155|pir||E96745
hypothetical protein T9N14.11 [imported] - Arabidopsis
thaliana
Length = 404
Score = 114 bits (284), Expect = 5e-24
Identities = 64/143 (44%), Positives = 82/143 (56%), Gaps = 16/143 (11%)
Query: 25 FTLTVLILCFVAFSVVYVCKYCFAGFFHTW---ALQRTTSGSLVR-------LSPDRSPS 74
F T+ IL V SV + F GFF + L+R L+ +R +
Sbjct: 59 FDPTMAILMIVLVSVFF-----FLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQA 113
Query: 75 RGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECI 134
RGLD +++E FPTF YS+VK LR K +LEC++CL EF+DD LRL+ CCHVFH CI
Sbjct: 114 RGLDASIIETFPTFQYSTVKTLRIGKE-ALECSVCLNEFEDDETLRLIPKCCHVFHPGCI 172
Query: 135 DLWLESHKTCPVCRTDLDSPPNQ 157
D WL SH TCP+CR DL P +
Sbjct: 173 DAWLRSHTTCPLCRADLIPVPGE 195
>gb|AAO42269.1| putative RING-H2 zinc finger protein ATL3 [Arabidopsis thaliana]
Length = 404
Score = 114 bits (284), Expect = 5e-24
Identities = 64/143 (44%), Positives = 82/143 (56%), Gaps = 16/143 (11%)
Query: 25 FTLTVLILCFVAFSVVYVCKYCFAGFFHTW---ALQRTTSGSLVR-------LSPDRSPS 74
F T+ IL V SV + F GFF + L+R L+ +R +
Sbjct: 59 FDPTMAILMIVLVSVFF-----FLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQA 113
Query: 75 RGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECI 134
RGLD +++E FPTF YS+VK LR K +LEC++CL EF+DD LRL+ CCHVFH CI
Sbjct: 114 RGLDASIIETFPTFQYSTVKTLRIGKE-ALECSVCLNEFEDDETLRLIPKCCHVFHPGCI 172
Query: 135 DLWLESHKTCPVCRTDLDSPPNQ 157
D WL SH TCP+CR DL P +
Sbjct: 173 DAWLRSHTTCPLCRADLIPVPGE 195
>ref|NP_198094.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana]
Length = 368
Score = 112 bits (280), Expect = 1e-23
Identities = 82/245 (33%), Positives = 114/245 (46%), Gaps = 56/245 (22%)
Query: 18 TPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQR--TTSGSLVRLSPDRSPSR 75
+P V + + L F+ F VY+ ++C T A+ T +G R + + +R
Sbjct: 42 SPAMAVVVVVVIAALFFMGFFTVYI-RHC------TGAVDGSVTPAGGARRRVTNATVAR 94
Query: 76 GLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECID 135
GLD +E FPTF+YS VK + K +LECAICL EF+DD LRLL C HVFH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKG-ALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 136 LWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGEE 195
WL+ H TCPVCRT+L T P + D+
Sbjct: 154 AWLQGHVTCPVCRTNLAE-------------------------QTPEPEVVVETDLEA-- 186
Query: 196 SDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGEEKDHEKYTLR 255
Q V + + + +F RSH+TGHS+V + GE D ++TLR
Sbjct: 187 ----------------QQQSAVPVPVVELPRVKFPRSHTTGHSVV-LPGESTD--RFTLR 227
Query: 256 LPEHV 260
+PE +
Sbjct: 228 VPEEL 232
>gb|AAM60957.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana]
Length = 368
Score = 112 bits (279), Expect = 2e-23
Identities = 82/245 (33%), Positives = 114/245 (46%), Gaps = 56/245 (22%)
Query: 18 TPPALVAFTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQR--TTSGSLVRLSPDRSPSR 75
+P V + + L F+ F VY+ ++C T A+ T +G R + + +R
Sbjct: 42 SPAMAVVVVVVIAALFFMGFFTVYI-RHC------TGAVDGSVTPAGGARRRVTNATVAR 94
Query: 76 GLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECID 135
GLD +E FPTF+YS VK + K +LECAICL EF+DD LRLL C HVFH CI
Sbjct: 95 GLDVETIETFPTFVYSEVKTQKIGKG-ALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 136 LWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGEE 195
WL+ H TCPVCRT+L T P + D+
Sbjct: 154 AWLQGHVTCPVCRTNLAE-------------------------QTPEPEVVVETDLEA-- 186
Query: 196 SDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGEEKDHEKYTLR 255
Q V + + + +F RSH+TGHS+V + GE D ++TLR
Sbjct: 187 ----------------QQQSAVPVPVVELPRVKFPRSHTTGHSVV-LPGESTD--RFTLR 227
Query: 256 LPEHV 260
+PE +
Sbjct: 228 VPEEL 232
>ref|NP_912558.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|24756877|gb|AAN64141.1| Hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 353
Score = 108 bits (271), Expect = 1e-22
Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 35/248 (14%)
Query: 25 FTLTVLILCFVAFSVVYVCKYCFAGFFHTWALQRTTSGSLVRLSPDRSP----------S 74
FT T +++ VA +V F+ + A R R + P S
Sbjct: 43 FTPTTVVV-LVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAASRAS 101
Query: 75 RGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECI 134
RGLD ++E FPT +Y VK KS LECA+CL EF D LR+L CCHVFH +CI
Sbjct: 102 RGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCI 161
Query: 135 DLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGE 194
D WL + TCP+CR +L +PP ++ +++L E V+ E
Sbjct: 162 DPWLAAAVTCPLCRANLTAPPVSLAA-------AESSDLTAPEEA-----------VQEE 203
Query: 195 ESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTIRGEEKDHEKYTL 254
ES+ + E + + + DH F R+ H T + +++TL
Sbjct: 204 ESEELDEASLMATFTPES-----VIDFGATHDHEFDRA-GYPHYRRTQSAMDAAPDRHTL 257
Query: 255 RLPEHVIR 262
RLPEHV++
Sbjct: 258 RLPEHVMK 265
>ref|XP_466364.1| putative RING-H2 zinc finger protein ATL6 [Oryza sativa (japonica
cultivar-group)] gi|46806007|dbj|BAD17281.1| putative
RING-H2 zinc finger protein ATL6 [Oryza sativa (japonica
cultivar-group)]
Length = 349
Score = 105 bits (263), Expect = 1e-21
Identities = 67/193 (34%), Positives = 94/193 (47%), Gaps = 14/193 (7%)
Query: 75 RGLDNTLLEKFPTFLYSSVKDLRKEKSYSLECAICLLEFDDDSMLRLLTICCHVFHQECI 134
RGLD + P Y+ V+ R +LECA+CL FDD LRLL C H FH +CI
Sbjct: 92 RGLDPAAVAAIPVVPYAEVRKHRSGGGGALECAVCLTVFDDGDDLRLLPQCSHAFHPDCI 151
Query: 135 DLWLESHKTCPVCRTDLDSPPNQMSKHGEGNHNNNNNNLNVQEGMTSLPCDDIHIDVRGE 194
D WLE H TCP+CR +L+ P E + + +E T + ++ E
Sbjct: 152 DPWLEGHVTCPLCRANLEKQPAPSPPAVEFSSSPAAAAAAAEESRTP-EAAAVRVEEVAE 210
Query: 195 ESDNVGEITRAQVHEGDQHDHHVGMSMQQQEDHRFSRSHSTGHSIVTI-------RGEEK 247
SD E TR + E + + + + R RS+STGHS+ + G+
Sbjct: 211 ASDE--EETRRREEEAVELESLRAV----RRAARMPRSNSTGHSLCALPAPRAPGPGDGG 264
Query: 248 DHEKYTLRLPEHV 260
DHE++T+RLP HV
Sbjct: 265 DHERFTVRLPPHV 277
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 575,028,089
Number of Sequences: 2540612
Number of extensions: 25106096
Number of successful extensions: 276410
Number of sequences better than 10.0: 2393
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 939
Number of HSP's that attempted gapping in prelim test: 268125
Number of HSP's gapped (non-prelim): 5087
length of query: 306
length of database: 863,360,394
effective HSP length: 127
effective length of query: 179
effective length of database: 540,702,670
effective search space: 96785777930
effective search space used: 96785777930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)
Medicago: description of AC126787.10