BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126786.2 - phase: 0
(161 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP04021.1| unknown protein [Arabidopsis thaliana] gi|2645294... 221 7e-57
pir||G86340 protein F2D10.35 [imported] - Arabidopsis thaliana g... 221 7e-57
emb|CAE03756.1| OSJNBa0013K16.5 [Oryza sativa (japonica cultivar... 188 5e-47
ref|ZP_00170687.1| COG3396: Uncharacterized conserved protein [R... 36 0.32
gb|AAW25603.1| unknown [Schistosoma japonicum] 35 0.71
ref|NP_102614.1| hypothetical protein mll0913 [Mesorhizobium lot... 33 2.1
ref|NP_285517.1| hypothetical protein DRA0194 [Deinococcus radio... 33 2.1
gb|AAC83648.1| malate synthase [Streptomyces clavuligerus] gi|62... 33 2.1
gb|AAQ62069.1| single myb histone 6 [Zea mays] 33 2.1
gb|AAK94066.1| MAGI-1C beta [Homo sapiens] 33 2.7
sp|Q96QZ7|BAIP1_HUMAN BAI1-associated protein 1 (BAP-1) (Membran... 33 2.7
emb|CAH76838.1| hypothetical protein PC000785.01.0 [Plasmodium c... 33 3.5
ref|XP_497557.1| PREDICTED: similar to RIKEN cDNA B230315M08; po... 32 4.6
ref|XP_578419.1| PREDICTED: similar to hypothetical protein 9830... 32 6.0
gb|AAN58504.1| putative shikimate kinase [Streptococcus mutans U... 32 6.0
dbj|BAE00673.1| unnamed protein product [Macaca fascicularis] 32 6.0
gb|EAA39610.1| GLP_192_7918_5111 [Giardia lamblia ATCC 50803] 32 7.8
>gb|AAP04021.1| unknown protein [Arabidopsis thaliana] gi|26452945|dbj|BAC43549.1|
unknown protein [Arabidopsis thaliana]
gi|15218043|ref|NP_173507.1| expressed protein
[Arabidopsis thaliana]
Length = 349
Score = 221 bits (562), Expect = 7e-57
Identities = 99/130 (76%), Positives = 117/130 (89%)
Query: 1 ISRNLKYEDPFDNPLVKVSKSKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRP 60
IS++L YEDPF+NP VK+ K S+VEMCGKVYRLAPVTLT++EQ +HQ+RRSRAYQWKRP
Sbjct: 168 ISKSLNYEDPFNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRP 227
Query: 61 TVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEA 120
T+FLKEG+S+PPDVDPDT+RWIPANHPFATT +DI +D A NV QK GVPFRI+AEHEA
Sbjct: 228 TIFLKEGDSIPPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEA 287
Query: 121 LQRKLEALQN 130
+Q+KLEALQN
Sbjct: 288 MQKKLEALQN 297
>pir||G86340 protein F2D10.35 [imported] - Arabidopsis thaliana
gi|8886939|gb|AAF80625.1| F2D10.35 [Arabidopsis
thaliana]
Length = 364
Score = 221 bits (562), Expect = 7e-57
Identities = 99/130 (76%), Positives = 117/130 (89%)
Query: 1 ISRNLKYEDPFDNPLVKVSKSKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRP 60
IS++L YEDPF+NP VK+ K S+VEMCGKVYRLAPVTLT++EQ +HQ+RRSRAYQWKRP
Sbjct: 183 ISKSLNYEDPFNNPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRP 242
Query: 61 TVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEA 120
T+FLKEG+S+PPDVDPDT+RWIPANHPFATT +DI +D A NV QK GVPFRI+AEHEA
Sbjct: 243 TIFLKEGDSIPPDVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEA 302
Query: 121 LQRKLEALQN 130
+Q+KLEALQN
Sbjct: 303 MQKKLEALQN 312
>emb|CAE03756.1| OSJNBa0013K16.5 [Oryza sativa (japonica cultivar-group)]
gi|50928281|ref|XP_473668.1| OSJNBa0013K16.5 [Oryza
sativa (japonica cultivar-group)]
Length = 319
Score = 188 bits (477), Expect = 5e-47
Identities = 87/150 (58%), Positives = 114/150 (76%)
Query: 1 ISRNLKYEDPFDNPLVKVSKSKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRP 60
I++ Y+DPF+NPLVK+ + S+ ++ GK YRLAP+ LT+E+QA+HQ+RRSR YQWKRP
Sbjct: 125 IAKPRVYDDPFNNPLVKIDEDTSTAQVFGKEYRLAPIRLTKEQQAMHQKRRSRTYQWKRP 184
Query: 61 TVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEA 120
TVFLKEG+S+PPDVDPDT+RWIP NHPFA ST++ E+ A +NV QK GVP R++AEHEA
Sbjct: 185 TVFLKEGDSLPPDVDPDTVRWIPVNHPFAAASTEVDEETAKQNVYQKDGVPSRVKAEHEA 244
Query: 121 LQRKLEALQNVSLSRIRNFNSPMFDTVLEV 150
LQ +LEA NV+ N + D L +
Sbjct: 245 LQTRLEASNNVNKFSSSQRNMQLSDRQLRL 274
>ref|ZP_00170687.1| COG3396: Uncharacterized conserved protein [Ralstonia eutropha
JMP134]
Length = 474
Score = 36.2 bits (82), Expect = 0.32
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 104 VSQKHGVPFRIQAEHEALQRKLEALQNVSLS 134
V +KHG+PF++ H+A RK+ L NV +S
Sbjct: 379 VIEKHGIPFKLTVPHKAFNRKIGTLSNVHVS 409
>gb|AAW25603.1| unknown [Schistosoma japonicum]
Length = 198
Score = 35.0 bits (79), Expect = 0.71
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 82 IPANHPFATTSTDIGEDFAHKNVSQK--HGVPFRIQAEHEALQRKLEALQNVSLSRIRNF 139
I AN + S DI +KNVSQK H + + + E E L R ++ L+ +S + R
Sbjct: 121 IEANMKYKNNSDDIQNFEEYKNVSQKLFHEIGYLVDLEGELLYRNIQYLKGLSKEKRRET 180
Query: 140 NSPMFDTVLE 149
N + V +
Sbjct: 181 NLDYYKRVAD 190
>ref|NP_102614.1| hypothetical protein mll0913 [Mesorhizobium loti MAFF303099]
gi|14021789|dbj|BAB48400.1| mll0913 [Mesorhizobium loti
MAFF303099]
Length = 312
Score = 33.5 bits (75), Expect = 2.1
Identities = 22/66 (33%), Positives = 35/66 (52%), Gaps = 6/66 (9%)
Query: 62 VFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEAL 121
V ++ + PP PDT I ANHPF IG+ A ++ ++ G PFR+ + L
Sbjct: 69 VRIRTADQWPPAPLPDTPLVIVANHPFG-----IGDGIAVLSLVEQLGRPFRVMIHKDLL 123
Query: 122 Q-RKLE 126
+ R++E
Sbjct: 124 KIREME 129
>ref|NP_285517.1| hypothetical protein DRA0194 [Deinococcus radiodurans R1]
gi|6460478|gb|AAF12184.1| conserved hypothetical protein
[Deinococcus radiodurans] gi|7471398|pir||B75616
conserved hypothetical protein - Deinococcus radiodurans
(strain R1)
Length = 386
Score = 33.5 bits (75), Expect = 2.1
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 54 AYQWKRPTVFLKEGESVPPDV---DPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGV 110
A +W+R LK+ +PP D I W+ AN P T T + DF N+
Sbjct: 180 AGRWRRARELLKDSGDLPPPAELRDELVIAWLEANVPDETAHTLVHNDFKLDNLMLDPAD 239
Query: 111 PFRIQA 116
P ++ A
Sbjct: 240 PSKVTA 245
>gb|AAC83648.1| malate synthase [Streptomyces clavuligerus]
gi|6225658|sp|Q9ZH77|MASY_STRCL Malate synthase
Length = 541
Score = 33.5 bits (75), Expect = 2.1
Identities = 22/78 (28%), Positives = 36/78 (45%), Gaps = 4/78 (5%)
Query: 42 EEQAVHQRRRSRAYQWKRPTVFLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAH 101
E+ A + RS+ +QW V L+ GE V P + +R + A A T GE++A
Sbjct: 453 EDAATAEISRSQIWQWINAGVVLENGERVTPAL----VRTLAAGELGALRETLGGEEYAA 508
Query: 102 KNVSQKHGVPFRIQAEHE 119
+ H + R+ + E
Sbjct: 509 GRWQEAHDLLLRVALDEE 526
>gb|AAQ62069.1| single myb histone 6 [Zea mays]
Length = 298
Score = 33.5 bits (75), Expect = 2.1
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 79 IRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEALQRKLEALQNVSLSRIRN 138
IR IP N+ T + D + V +K V +A++ + +K L N+ + I+N
Sbjct: 76 IRTIPKNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKN 135
Query: 139 FNSP 142
N P
Sbjct: 136 LNEP 139
>gb|AAK94066.1| MAGI-1C beta [Homo sapiens]
Length = 1462
Score = 33.1 bits (74), Expect = 2.7
Identities = 23/78 (29%), Positives = 33/78 (41%), Gaps = 6/78 (7%)
Query: 26 EMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQW-----KRPTVFLKEGESVPPDVDPDTIR 80
E CGK+ R+ L + + SRA + +R +FLK G+ P+ DP + R
Sbjct: 1159 ERCGKM-RIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGDGSVPEYDPSSDR 1217
Query: 81 WIPANHPFATTSTDIGED 98
PA P G D
Sbjct: 1218 HGPATGPQGVPEVRAGPD 1235
>sp|Q96QZ7|BAIP1_HUMAN BAI1-associated protein 1 (BAP-1) (Membrane associated guanylate
kinase inverted-1) (MAGI-1) (Atrophin-1 interacting
protein 3) (AIP3) (WW domain-containing protein 3) (WWP3)
(Trinucleotide repeat-containing gene 19 protein)
Length = 1491
Score = 33.1 bits (74), Expect = 2.7
Identities = 23/78 (29%), Positives = 33/78 (41%), Gaps = 6/78 (7%)
Query: 26 EMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQW-----KRPTVFLKEGESVPPDVDPDTIR 80
E CGK+ R+ L + + SRA + +R +FLK G+ P+ DP + R
Sbjct: 1188 ERCGKM-RIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRGDGSVPEYDPSSDR 1246
Query: 81 WIPANHPFATTSTDIGED 98
PA P G D
Sbjct: 1247 HGPATGPQGVPEVRAGPD 1264
>emb|CAH76838.1| hypothetical protein PC000785.01.0 [Plasmodium chabaudi]
Length = 84
Score = 32.7 bits (73), Expect = 3.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 66 EGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEA 120
+G+S+ VD D I W ++ TTST +G D KN + VP + EH A
Sbjct: 24 DGDSLFLQVD-DQIIWTESHKSNDTTSTLLGIDVCGKNTPDRLSVPIDAEFEHSA 77
>ref|XP_497557.1| PREDICTED: similar to RIKEN cDNA B230315M08; polymeric
immunoglobulin receptor 4; mast cell-derived paired
immunoglobulin-like receptor 1 [Homo sapiens]
Length = 353
Score = 32.3 bits (72), Expect = 4.6
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 57 WKRPTVFL------KEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGV 110
W R +FL K GES +IR PAN F T + E+ A V G
Sbjct: 201 WCRQPLFLLCDKTVKAGESAGVSNGXVSIRDHPANLSFTVTLESLTEEDAGGGVGVPRGA 260
Query: 111 PFRIQAEHEALQRKLEALQNVSLSRIRNFNSPMFDTVLEVVVQMPCL 157
PF +H+A +L V LS F+SP VL +V+++P L
Sbjct: 261 PF---TQHQACL----SLGLVILSLNSLFSSPY---VLLLVLELPLL 297
>ref|XP_578419.1| PREDICTED: similar to hypothetical protein 9830102E05 [Rattus
norvegicus]
Length = 992
Score = 32.0 bits (71), Expect = 6.0
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 21 SKSSVEMCGKVYRLAPVTLTQEEQAVHQRRRSRAYQWKRPTVFLKEGESVPP 72
S SS E+ G + A V E A H+R R+R YQW TV+ ++ +V P
Sbjct: 77 SFSSPELFGNTFSTAEVI---RETAPHERSRNRGYQWF--TVYARQPYAVSP 123
>gb|AAN58504.1| putative shikimate kinase [Streptococcus mutans UA159]
gi|24379243|ref|NP_721198.1| putative shikimate kinase
[Streptococcus mutans UA159]
Length = 158
Score = 32.0 bits (71), Expect = 6.0
Identities = 16/68 (23%), Positives = 36/68 (52%)
Query: 63 FLKEGESVPPDVDPDTIRWIPANHPFATTSTDIGEDFAHKNVSQKHGVPFRIQAEHEALQ 122
F KEGE +++ +T+ + + +T + E ++++ K+G ++A+ E L
Sbjct: 43 FEKEGEDAFREIESETLSNLADSDSTVSTGGGVVESARNRDILAKNGETIYLKADFETLC 102
Query: 123 RKLEALQN 130
+++EA N
Sbjct: 103 KRIEADSN 110
>dbj|BAE00673.1| unnamed protein product [Macaca fascicularis]
Length = 404
Score = 32.0 bits (71), Expect = 6.0
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 38 TLTQEEQAVHQRRRSRAYQWKRPTVFLKEGESVPPDVDPDTIRWIP----ANHPFATTST 93
T+T+E+Q + S YQ ++ VFLK + +PP V P+ W + HP+
Sbjct: 302 TITKEKQDQPKEDISN-YQVEQAQVFLKREKEIPPTVFPNRSPWCQNPYVSAHPYCPLIE 360
Query: 94 DIGEDFAHKNVS-QKHGVPFRIQAEHEALQRKLEALQNVS 132
A N+ Q P R E + L A + +S
Sbjct: 361 PRNTSTAGGNLDRQSRSQPTRPNRASEKFTKSLNASKKMS 400
>gb|EAA39610.1| GLP_192_7918_5111 [Giardia lamblia ATCC 50803]
Length = 935
Score = 31.6 bits (70), Expect = 7.8
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 73 DVDPDTIRWIP----ANH------PFATTSTDIGE-DFAHKNVSQKHGVPFRIQAEHEAL 121
D+ P+ +R +P ++H PF+ I E + + S++H P + H+++
Sbjct: 604 DIQPEVVRSVPITAPSDHSFALAPPFSAGMFVIDESEIVRQRTSEQHTPPEMVSHGHDSV 663
Query: 122 QRKLEALQNVSLSRIR 137
K EA +V LS IR
Sbjct: 664 YSKCEASDHVDLSLIR 679
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 266,722,714
Number of Sequences: 2540612
Number of extensions: 9928104
Number of successful extensions: 26959
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 26952
Number of HSP's gapped (non-prelim): 17
length of query: 161
length of database: 863,360,394
effective HSP length: 117
effective length of query: 44
effective length of database: 566,108,790
effective search space: 24908786760
effective search space used: 24908786760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC126786.2