BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126783.2 + phase: 0
(147 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA63025.1| 60S ribosomal protein L27a [Arabidopsis thaliana... 265 2e-70
gb|AAM62795.1| 60S ribosomal protein L27A [Arabidopsis thaliana] 264 4e-70
gb|AAD13388.1| ribosomal protein L27a [Petunia x hybrida] 260 5e-69
gb|AAN18111.1| At1g23290/F26F24_23 [Arabidopsis thaliana] gi|131... 258 3e-68
dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng] 257 4e-68
ref|XP_479144.1| putative 60S ribosomal protein L27a [Oryza sati... 242 1e-63
ref|XP_468609.1| putative ribosomal protein L27a [Oryza sativa (... 241 3e-63
dbj|BAD27612.1| putative 60S ribosomal protein L27a [Oryza sativ... 238 3e-62
ref|NP_703842.1| 60S ribosomal protein L27a, putative [Plasmodiu... 206 7e-53
gb|EAA22942.1| ribosomal protein L27a [Plasmodium yoelii yoelii] 206 7e-53
emb|CAI74670.1| 60S ribosomal protein L27a, putative [Theileria ... 205 2e-52
emb|CAH96683.1| 60S ribosomal protein L27a, putative [Plasmodium... 204 3e-52
gb|AAN05585.1| ribosomal protein L22 [Argopecten irradians] 204 5e-52
ref|XP_629601.1| 60S ribosomal protein L27a [Dictyostelium disco... 199 1e-50
gb|AAY66881.1| ribosomal protein L27A [Ixodes scapularis] 197 4e-50
gb|AAW47434.1| ribosomal protein L27a [Pectinaria gouldii] 195 2e-49
emb|CAG61114.1| unnamed protein product [Candida glabrata CBS138... 195 2e-49
gb|AAS98891.1| ribosomal protein L29 [Cyanidioschyzon merolae st... 195 2e-49
gb|AAW41860.1| structural constituent of ribosome, putative [Cry... 194 4e-49
gb|AAK27870.1| Hypothetical protein Y37E3.8a [Caenorhabditis ele... 194 5e-49
>emb|CAA63025.1| 60S ribosomal protein L27a [Arabidopsis thaliana]
gi|20147177|gb|AAM10305.1| At1g70600/F5A18_22
[Arabidopsis thaliana] gi|15223190|ref|NP_177217.1| 60S
ribosomal protein L27A (RPL27aC) [Arabidopsis thaliana]
gi|15081672|gb|AAK82491.1| At1g70600/F5A18_22
[Arabidopsis thaliana] gi|14517370|gb|AAK62576.1|
At1g70600/F5A18_22 [Arabidopsis thaliana]
gi|1710530|sp|P49637|RL27C_ARATH 60S ribosomal protein
L27a-3 gi|12325037|gb|AAG52464.1| 60S ribosomal protein
L27A; 71521-71081 [Arabidopsis thaliana]
gi|12324756|gb|AAG52338.1| 60S ribosomal protein L27A;
82981-83421 [Arabidopsis thaliana]
Length = 146
Score = 265 bits (676), Expect = 2e-70
Identities = 126/147 (85%), Positives = 137/147 (92%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FHKLRNKF+ PIVN+DK+ SL+P+DVK K+ K+N P+IDVTQ GFFK+LGKG LP+N+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDN-VPLIDVTQHGFFKVLGKGHLPENKP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
FVVK KLISK AEKKIKEAGGAVVLTA
Sbjct: 120 FVVKAKLISKTAEKKIKEAGGAVVLTA 146
>gb|AAM62795.1| 60S ribosomal protein L27A [Arabidopsis thaliana]
Length = 146
Score = 264 bits (674), Expect = 4e-70
Identities = 126/147 (85%), Positives = 136/147 (91%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FHKLRNKF+ PIVN+DK+ SL+P+DVK K+ K N P+IDVTQ GFFK+LGKG LP+N+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSTK-NNVPLIDVTQHGFFKVLGKGHLPENKP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
FVVK KLISK AEKKIKEAGGAVVLTA
Sbjct: 120 FVVKAKLISKTAEKKIKEAGGAVVLTA 146
>gb|AAD13388.1| ribosomal protein L27a [Petunia x hybrida]
Length = 150
Score = 260 bits (664), Expect = 5e-69
Identities = 125/150 (83%), Positives = 135/150 (89%), Gaps = 3/150 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKAL---KENKAPVIDVTQFGFFKLLGKGVLPQ 117
FHKLRNKFY P VNIDK+ SL+PQDVK+K + AP+IDVTQ+G+FK+LGKGVLP+
Sbjct: 61 FHKLRNKFYCPTVNIDKLWSLVPQDVKDKVAAGGAKGTAPLIDVTQYGYFKVLGKGVLPE 120
Query: 118 NQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
NQ VVK KL+SK AEKKIKEAGGAVVLTA
Sbjct: 121 NQAVVVKAKLVSKNAEKKIKEAGGAVVLTA 150
>gb|AAN18111.1| At1g23290/F26F24_23 [Arabidopsis thaliana]
gi|13194820|gb|AAK15572.1| putative 60s ribosomal
protein l27a [Arabidopsis thaliana]
gi|11692928|gb|AAG40067.1| At1g23290 [Arabidopsis
thaliana] gi|15220698|ref|NP_173743.1| 60S ribosomal
protein L27A (RPL27aB) [Arabidopsis thaliana]
gi|15294178|gb|AAK95266.1| At1g23290/F26F24_23
[Arabidopsis thaliana] gi|20143883|sp|Q9LR33|RL27A_ARATH
60S ribosomal protein L27a-2 gi|9295692|gb|AAF86998.1|
F26F24.13 [Arabidopsis thaliana]
Length = 146
Score = 258 bits (658), Expect = 3e-68
Identities = 123/147 (83%), Positives = 134/147 (90%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M T KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FHKLRNKF+ PIVN+DK+ SL+P+DVK K+ K+N P+IDVTQ GFFK+LGKG LP+N+P
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDN-VPLIDVTQHGFFKVLGKGHLPENKP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
FVVK KLISK AEKKIKEAGGAVVLTA
Sbjct: 120 FVVKAKLISKTAEKKIKEAGGAVVLTA 146
>dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]
Length = 146
Score = 257 bits (657), Expect = 4e-68
Identities = 123/147 (83%), Positives = 133/147 (89%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKN KKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNXKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FH+LRNKFY P+VNIDK+ SL+PQ+ KEKA +N APVIDVTQ G+FK+LGKG LP + P
Sbjct: 61 FHRLRNKFYCPVVNIDKLWSLLPQEAKEKADAQN-APVIDVTQHGYFKVLGKGFLPSSHP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
VVK KL+SK AEKKIKEAGGAVVLTA
Sbjct: 120 IVVKAKLVSKTAEKKIKEAGGAVVLTA 146
>ref|XP_479144.1| putative 60S ribosomal protein L27a [Oryza sativa (japonica
cultivar-group)] gi|24059854|dbj|BAC21322.1| putative
60S ribosomal protein L27a [Oryza sativa (japonica
cultivar-group)] gi|23237917|dbj|BAC16490.1| putative
60S ribosomal protein L27a [Oryza sativa (japonica
cultivar-group)]
Length = 146
Score = 242 bits (618), Expect = 1e-63
Identities = 112/147 (76%), Positives = 131/147 (88%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTT +KNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTSLRKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FH+LRNKFY+P VN++++ S++P + +A KAP++DVTQFG+FK+LGKG+LP+ +P
Sbjct: 61 FHRLRNKFYSPAVNVERLWSMVPAEQAAEAAGAGKAPLLDVTQFGYFKVLGKGLLPE-KP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
VVK KLISK+AEKKIK AGGAVVLTA
Sbjct: 120 IVVKAKLISKVAEKKIKAAGGAVVLTA 146
>ref|XP_468609.1| putative ribosomal protein L27a [Oryza sativa (japonica
cultivar-group)] gi|30017566|gb|AAP12988.1| putative
ribosomal protein L27a [Oryza sativa (japonica
cultivar-group)]
Length = 146
Score = 241 bits (614), Expect = 3e-63
Identities = 114/147 (77%), Positives = 128/147 (86%), Gaps = 1/147 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FHKL N+F+ P VN++++ S++P D K KAPVIDVTQFG+ K+LGKG+LP +P
Sbjct: 61 FHKLSNRFHCPAVNVERLWSMVPTD-KAAEAGAGKAPVIDVTQFGYTKVLGKGMLPPQRP 119
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
VVK KLISK+AEKKIK AGGAV+LTA
Sbjct: 120 IVVKAKLISKVAEKKIKAAGGAVLLTA 146
>dbj|BAD27612.1| putative 60S ribosomal protein L27a [Oryza sativa (japonica
cultivar-group)]
Length = 144
Score = 238 bits (606), Expect = 3e-62
Identities = 112/147 (76%), Positives = 128/147 (86%), Gaps = 3/147 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FH+L N+F+ P VN++++ S++P + A KAPVIDVTQFG+ K+LGKG+LP +P
Sbjct: 61 FHRLSNRFHCPAVNVERLWSMVPAEAGAGA---GKAPVIDVTQFGYTKVLGKGMLPPERP 117
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
VVK KLISK+AEKKIK AGGAV+LTA
Sbjct: 118 IVVKAKLISKVAEKKIKAAGGAVLLTA 144
>ref|NP_703842.1| 60S ribosomal protein L27a, putative [Plasmodium falciparum 3D7]
gi|46361134|emb|CAG24998.1| 60S ribosomal protein L27a,
putative; putative 60S ribosomal protein l27a
[Plasmodium falciparum 3D7]
Length = 148
Score = 206 bits (525), Expect = 7e-53
Identities = 98/149 (65%), Positives = 117/149 (77%), Gaps = 3/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRFKKNRKKRGHVSAGHGR+GKHRKHPGGRG AGG+HH RI FDKYHPGYFGKVGMR+
Sbjct: 1 MATRFKKNRKKRGHVSAGHGRVGKHRKHPGGRGKAGGLHHMRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENK--APVIDVTQFGFFKLLGKGVLPQN 118
+ L+N+ Y P +N+DK+ L+P++ K+K ENK APVIDVT+ G+FK+LG G L N
Sbjct: 61 LNLLKNRTYCPTINVDKLWGLLPEE-KKKEFSENKDIAPVIDVTRKGYFKVLGNGKLKHN 119
Query: 119 QPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
QP VVK + S +AEKKIK GG +L A
Sbjct: 120 QPIVVKARYFSSVAEKKIKAVGGQCILVA 148
>gb|EAA22942.1| ribosomal protein L27a [Plasmodium yoelii yoelii]
Length = 148
Score = 206 bits (525), Expect = 7e-53
Identities = 100/148 (67%), Positives = 116/148 (77%), Gaps = 1/148 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG AGGMHH RI FDKYHPGYFGKVGMR+
Sbjct: 1 MATRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGKAGGMHHMRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEK-ALKENKAPVIDVTQFGFFKLLGKGVLPQNQ 119
+ L+N+ Y +NIDK+ L+P++ K++ A EN APVIDVT+ G+FK+LG G L NQ
Sbjct: 61 LNLLKNRKYCRTINIDKLWGLLPEEKKQEFAKNENIAPVIDVTRVGYFKVLGNGNLEHNQ 120
Query: 120 PFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P VVK + S IAEKKIK GG +L A
Sbjct: 121 PIVVKARYFSSIAEKKIKAVGGQCILVA 148
>emb|CAI74670.1| 60S ribosomal protein L27a, putative [Theileria annulata]
Length = 147
Score = 205 bits (521), Expect = 2e-52
Identities = 99/148 (66%), Positives = 121/148 (80%), Gaps = 2/148 (1%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
MTTRFKK+RK RGHVSAGHGR+GKHRKHPGGRG AGG HHRILFDK+HPGYFGKVGMR+
Sbjct: 1 MTTRFKKSRKLRGHVSAGHGRVGKHRKHPGGRGKAGGDSHHRILFDKFHPGYFGKVGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDV-KEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQ 119
FHKLRN+++ VN++++ L+P++ KE A K + APV+DV Q G+FK+LG G +P +
Sbjct: 61 FHKLRNQYFMRTVNVNQLWDLVPEETRKEYADKPDMAPVLDVMQSGYFKVLGTGNMPP-R 119
Query: 120 PFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P VVK +L SK AE+KIKEAGGA VL A
Sbjct: 120 PLVVKARLFSKTAERKIKEAGGACVLVA 147
>emb|CAH96683.1| 60S ribosomal protein L27a, putative [Plasmodium berghei]
Length = 148
Score = 204 bits (520), Expect = 3e-52
Identities = 99/148 (66%), Positives = 115/148 (76%), Gaps = 1/148 (0%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRG AGGMHH RI FDKYHPGYFGKVGMR+
Sbjct: 1 MATRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGKAGGMHHMRINFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQD-VKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQ 119
+ L+N+ Y +N+DK+ L+P++ KE A EN APVIDVT+ G+FK+LG G L NQ
Sbjct: 61 LNLLKNRKYCRTINVDKLWGLLPEEKKKEFAKNENIAPVIDVTRVGYFKVLGNGHLEHNQ 120
Query: 120 PFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P VVK + S +AEKKIK GG +L A
Sbjct: 121 PIVVKARYFSSMAEKKIKAVGGQCILVA 148
>gb|AAN05585.1| ribosomal protein L22 [Argopecten irradians]
Length = 152
Score = 204 bits (518), Expect = 5e-52
Identities = 98/146 (67%), Positives = 116/146 (79%), Gaps = 2/146 (1%)
Query: 3 TRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFH 62
T+ KK RK RGHVS GHGRIGKHRKHPGGRGNAGG HHHRI FDKYHPGYFGKVGMRY+H
Sbjct: 8 TKLKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRYYH 67
Query: 63 KLRNKFYNPIVNIDKIASLIPQDVKEK-ALKENKAPVIDVTQFGFFKLLGKGVLPQNQPF 121
K +NKF+ P VN+DK+ SL+ +EK A ++KAPVIDV + G++K+LGKG LP+ QP
Sbjct: 68 KTQNKFFCPTVNLDKLWSLVSDQTREKYASSKDKAPVIDVVRAGYYKVLGKGHLPK-QPV 126
Query: 122 VVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK + S+ AE KIK AGGA VL A
Sbjct: 127 IVKARFFSRSAELKIKAAGGACVLVA 152
>ref|XP_629601.1| 60S ribosomal protein L27a [Dictyostelium discoideum]
gi|7440771|pir||JE0320 ribosomal protein Ddl27a - slime
mold (Dictyostelium discoideum)
gi|60462977|gb|EAL61173.1| ribosomal protein L27a
[Dictyostelium discoideum]
gi|1350711|sp|P48160|RL27A_DICDI 60S ribosomal protein
L27a gi|790954|dbj|BAA08873.1| ribosomal protein
[Dictyostelium discoideum]
Length = 148
Score = 199 bits (505), Expect = 1e-50
Identities = 93/149 (62%), Positives = 118/149 (78%), Gaps = 3/149 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRF K+RK RG V AG+GR+GKHRKHPGGRGNAGG+ HHRI FDKYHPGYFGK+GMR+
Sbjct: 1 MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEK--ALKENKAPVIDVTQFGFFKLLGKGVLPQN 118
FH LRN+++ P V+++KI +L+P+ V++ A + APV+DVTQ GFFK+LG G+LP
Sbjct: 61 FHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-T 119
Query: 119 QPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
QP +VK + SK+AEKKIK GGA +L A
Sbjct: 120 QPIIVKARYFSKVAEKKIKAVGGACILVA 148
>gb|AAY66881.1| ribosomal protein L27A [Ixodes scapularis]
Length = 148
Score = 197 bits (501), Expect = 4e-50
Identities = 95/150 (63%), Positives = 117/150 (77%), Gaps = 5/150 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M+T KK RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI FDKYHPGYFGKVGMR
Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRN 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKEN---KAPVIDVTQFGFFKLLGKGVLPQ 117
FH +N ++ P +NIDKI SL+ + ++ K LK++ KAPVID+ + G++K+LGKG LP+
Sbjct: 61 FHLKKNHYWKPCINIDKIWSLVSEQMR-KRLKDDTAGKAPVIDIVKHGYYKVLGKGALPK 119
Query: 118 NQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
QP +VK K S+ AE+KIK GGA +LTA
Sbjct: 120 -QPVIVKAKWFSRTAEEKIKNVGGACILTA 148
>gb|AAW47434.1| ribosomal protein L27a [Pectinaria gouldii]
Length = 147
Score = 195 bits (496), Expect = 2e-49
Identities = 90/142 (63%), Positives = 110/142 (77%), Gaps = 1/142 (0%)
Query: 6 KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLR 65
KK RK RGHVS GHGR+GKHRKHPGGRGNAGGMHHHRI +DKYHPGYFGKVGMR+FH +
Sbjct: 7 KKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGMHHHRINYDKYHPGYFGKVGMRHFHMTK 66
Query: 66 NKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQPFVVKT 125
K+Y P +N+DK+ +L+ + V++ A K PVI+ G +K+LGKG+LP+ QP +VK
Sbjct: 67 QKYYCPTINVDKLWTLVSEKVRDDAKNNQKVPVINCLNGGVYKVLGKGLLPK-QPVIVKA 125
Query: 126 KLISKIAEKKIKEAGGAVVLTA 147
K SK AEKKIK+ GGA VL A
Sbjct: 126 KFFSKQAEKKIKDVGGACVLIA 147
>emb|CAG61114.1| unnamed protein product [Candida glabrata CBS138]
gi|50291461|ref|XP_448163.1| unnamed protein product
[Candida glabrata]
Length = 149
Score = 195 bits (495), Expect = 2e-49
Identities = 94/150 (62%), Positives = 115/150 (76%), Gaps = 4/150 (2%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRF K RK RGHVSAG GRIGKHRKHPGGRG AGG HHHR DKYHPGYFGKVGMRY
Sbjct: 1 MPTRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRY 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALK---ENKAPVIDVTQFGFFKLLGKGVLPQ 117
FHK +N F+ P++N+DK+ +LIP+D +++ LK ++ APVID G+ K+LGKG +P
Sbjct: 61 FHKQQNHFWRPVLNLDKLWTLIPEDKRDEYLKSSSKSAAPVIDTLAAGYGKVLGKGRIP- 119
Query: 118 NQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
N P +VK + +SK+AE+KIK AGG V L A
Sbjct: 120 NVPVIVKARFVSKLAEEKIKAAGGVVELIA 149
>gb|AAS98891.1| ribosomal protein L29 [Cyanidioschyzon merolae strain 10D]
Length = 151
Score = 195 bits (495), Expect = 2e-49
Identities = 103/152 (67%), Positives = 116/152 (75%), Gaps = 6/152 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHP--GGRGNAGGMHHHRILFDKYHPGYFGKVGM 58
M TRFKKNRKKRGHVSAGHGRIGKHRK GGRG AGGMHHHR L DKYHPGYFGKVGM
Sbjct: 1 MATRFKKNRKKRGHVSAGHGRIGKHRKGGARGGRGMAGGMHHHRTLLDKYHPGYFGKVGM 60
Query: 59 RYFH--KLRNKFYNPIVNIDKIASLIPQDVKEK-ALKENKAPVIDVTQFGFFKLLGKGVL 115
RYF+ +N Y P +NIDK+ +LIP KEK A + APV+DVT+ GFFK+LG+G L
Sbjct: 61 RYFNAGADKNAKYTPCINIDKLWTLIPPAEKEKYASNKEAAPVLDVTRAGFFKVLGRGHL 120
Query: 116 PQNQPFVVKTKLISKIAEKKIKEAGGAVVLTA 147
P+ QP +VK K SK AEK+IK AGG VLTA
Sbjct: 121 PK-QPLIVKAKYFSKTAEKRIKAAGGVCVLTA 151
>gb|AAW41860.1| structural constituent of ribosome, putative [Cryptococcus
neoformans var. neoformans JEC21]
gi|50259781|gb|EAL22449.1| hypothetical protein CNBB3280
[Cryptococcus neoformans var. neoformans B-3501A]
gi|58263519|ref|XP_569167.1| structural constituent of
ribosome, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 142
Score = 194 bits (493), Expect = 4e-49
Identities = 94/147 (63%), Positives = 109/147 (73%), Gaps = 5/147 (3%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M TRF RK RGHVSAGHGRIGKHRKHPGGRG AGG HHHR FDKYHPGYFGKVGMR+
Sbjct: 1 MPTRFSNTRKHRGHVSAGHGRIGKHRKHPGGRGLAGGQHHHRTNFDKYHPGYFGKVGMRH 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
+H L+N +Y P +N+DK+ SL V E PVID+ G FKLLGKG + N+P
Sbjct: 61 YHLLKNHYYRPTINLDKLISLPEAKVD---APEGNVPVIDLVHLGKFKLLGKGRI--NKP 115
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
F+VKT+ +SK+AE+KIKEAGG V L A
Sbjct: 116 FIVKTRFVSKLAEEKIKEAGGVVKLVA 142
>gb|AAK27870.1| Hypothetical protein Y37E3.8a [Caenorhabditis elegans]
gi|17509867|ref|NP_490927.1| ribosomal protein L27 (16.2
kD) (1C638) [Caenorhabditis elegans]
Length = 145
Score = 194 bits (492), Expect = 5e-49
Identities = 93/147 (63%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Query: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
M +K RK RGHVS GHGRIGKHRKHPGGRGNAGG HHHRI DKYHPGYFGKVGMR
Sbjct: 1 MAHALRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRV 60
Query: 61 FHKLRNKFYNPIVNIDKIASLIPQDVKEKALKENKAPVIDVTQFGFFKLLGKGVLPQNQP 120
FH +N+ Y P VN++++ SL+PQ+V++KA K+PVID T+ G+FK+LGKG+LP+ P
Sbjct: 61 FHLNKNQHYCPTVNVERLWSLVPQEVRDKA-TGGKSPVIDCTKLGYFKVLGKGLLPET-P 118
Query: 121 FVVKTKLISKIAEKKIKEAGGAVVLTA 147
+VK + S AE+KIK+AGGA VL A
Sbjct: 119 LIVKARFFSHEAEQKIKKAGGACVLVA 145
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.142 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 282,414,433
Number of Sequences: 2540612
Number of extensions: 12605979
Number of successful extensions: 29096
Number of sequences better than 10.0: 269
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 28299
Number of HSP's gapped (non-prelim): 350
length of query: 147
length of database: 863,360,394
effective HSP length: 123
effective length of query: 24
effective length of database: 550,865,118
effective search space: 13220762832
effective search space used: 13220762832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC126783.2