BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126782.12 + phase: 0
(116 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_671822.1| hypothetical protein [Arabidopsis thaliana] 74 1e-12
ref|NP_683354.1| glycine-rich protein [Arabidopsis thaliana] 47 8e-05
dbj|BAB03174.1| unnamed protein product [Arabidopsis thaliana] g... 44 7e-04
gb|AAL79730.1| putative ribosomal protein [Oryza sativa] 42 0.003
ref|XP_423391.1| PREDICTED: similar to SET domain ERG-associated... 42 0.005
emb|CAI75704.1| hypothetical protein, conserved [Theileria annul... 41 0.008
ref|NP_076368.1| retinitis pigmentosa GTPase regulator interacti... 40 0.013
dbj|BAC26697.1| unnamed protein product [Mus musculus] 40 0.013
ref|XP_652429.1| hypothetical protein 118.t00021 [Entamoeba hist... 40 0.017
emb|CAA94113.1| Hypothetical protein C11G6.3 [Caenorhabditis ele... 39 0.023
gb|EAL22384.1| hypothetical protein CNBB5570 [Cryptococcus neofo... 39 0.023
dbj|BAA95789.1| KED [Nicotiana tabacum] 39 0.023
ref|XP_655698.1| hypothetical protein 24.t00040 [Entamoeba histo... 39 0.030
ref|XP_641606.1| hypothetical protein DDB0205993 [Dictyostelium ... 39 0.039
ref|XP_635574.1| hypothetical protein DDB0189046 [Dictyostelium ... 39 0.039
emb|CAG91077.1| unnamed protein product [Debaryomyces hansenii C... 38 0.051
emb|CAE70892.1| Hypothetical protein CBG17683 [Caenorhabditis br... 38 0.051
gb|AAP78929.1| At5g38880 [Arabidopsis thaliana] 38 0.066
ref|XP_234092.3| PREDICTED: similar to intracellular membrane-as... 38 0.066
dbj|BAB08644.1| unnamed protein product [Arabidopsis thaliana] g... 38 0.066
>ref|NP_671822.1| hypothetical protein [Arabidopsis thaliana]
Length = 133
Score = 73.6 bits (179), Expect = 1e-12
Identities = 48/118 (40%), Positives = 72/118 (60%), Gaps = 20/118 (16%)
Query: 1 MGGNVGSGSSRSKRSHK------DSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWV 54
+GGN SGSS SKR+H+ +SVGSSARPM R+AAKKK KK++++ LE++
Sbjct: 29 IGGNTYSGSSGSKRAHESDASDSNSVGSSARPMERDAAKKKLKKKAQELDRLEKI----- 83
Query: 55 QFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYLKLSSEEHLDDRKKEHLVKHIWTKFG 112
+ H E ++ +EK KKMKM+++L+ +E+LDD+ K+ L + FG
Sbjct: 84 --------TMMH-SETNQLIKEKTHAKKMKMFIELTEKENLDDKSKKLLQQLSHDLFG 132
>ref|NP_683354.1| glycine-rich protein [Arabidopsis thaliana]
Length = 268
Score = 47.4 bits (111), Expect = 8e-05
Identities = 26/43 (60%), Positives = 31/43 (71%), Gaps = 6/43 (13%)
Query: 3 GNVGSGSSRSKRSHK------DSVGSSARPMGREAAKKKGIKK 39
GN GSGSS SKR+H+ +SVGSSARP+G + AKKK KK
Sbjct: 132 GNTGSGSSGSKRTHESDVRDANSVGSSARPIGSDIAKKKTKKK 174
>dbj|BAB03174.1| unnamed protein product [Arabidopsis thaliana]
gi|15228477|ref|NP_189519.1| expressed protein
[Arabidopsis thaliana]
Length = 2081
Score = 44.3 bits (103), Expect = 7e-04
Identities = 32/101 (31%), Positives = 56/101 (54%), Gaps = 4/101 (3%)
Query: 12 SKRSHKDSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYT 71
+K +KD++ +S++ G++ KKK K+ ++ EE +KE+V E+K+QE ++ KE T
Sbjct: 925 NKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVN-NELKKQE-DNKKETT 982
Query: 72 KVQQEKNRLKKMKMYLKLSSEEHL--DDRKKEHLVKHIWTK 110
K + K + + K SE+ + KKE+ K TK
Sbjct: 983 KSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTK 1023
Score = 32.7 bits (73), Expect = 2.1
Identities = 22/97 (22%), Positives = 51/97 (51%), Gaps = 5/97 (5%)
Query: 9 SSRSKRSHKDSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLK 68
S++ K + S + ++ + KK K++++ + +E+E Q E+ ++E + K
Sbjct: 1128 SNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSK 1187
Query: 69 EYTKVQQEKNRLKKMKMYLKLSSEEHLDDRKKEHLVK 105
+ Q+K + K+MK + +++ +DRKK+ V+
Sbjct: 1188 D-----QQKKKEKEMKESEEKKLKKNEEDRKKQTSVE 1219
>gb|AAL79730.1| putative ribosomal protein [Oryza sativa]
Length = 915
Score = 42.4 bits (98), Expect = 0.003
Identities = 28/88 (31%), Positives = 47/88 (52%), Gaps = 19/88 (21%)
Query: 18 DSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEK 77
D + RPMG++ AKK ++ Q KE+ ++E L +++K+Q E+
Sbjct: 300 DELDEQPRPMGQKRAKKL----------------QYAQSKEVDHIDLEELDKFSKLQNEQ 343
Query: 78 --NRLKKMKMYLKLSSEEHLDDRKKEHL 103
NRLK +++ KLSSE+ ++ K HL
Sbjct: 344 NANRLKVLEIQQKLSSEK-IEQTKISHL 370
>ref|XP_423391.1| PREDICTED: similar to SET domain ERG-associated histone
methyltransferase [Gallus gallus]
Length = 1301
Score = 41.6 bits (96), Expect = 0.005
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 16/110 (14%)
Query: 19 SVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKN 78
+VG A P GR + IK+ + E +E+ + +E+++ E L++ V+Q+K
Sbjct: 198 AVGVGAGPWGRAEMDSQDIKELQQ----EVMEEMGISMEELQDIINEELEKSEYVKQKKQ 253
Query: 79 RLKKMKMYLKLSSEE--HLDD---------RKKEHLVKHIWTKFGM-YRD 116
+L++++ Y+K EE H+D K E LVK +++K G+ YR+
Sbjct: 254 QLEELEKYVKQKEEEVAHVDRLFDDAWRDFDKCEMLVKDLYSKLGLEYRE 303
>emb|CAI75704.1| hypothetical protein, conserved [Theileria annulata]
Length = 377
Score = 40.8 bits (94), Expect = 0.008
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 35 KGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYL-KLSSEE 93
+GIK+ + +E V++ + E+K+ E+ +EY +++ E R KK+KM L +LS
Sbjct: 284 EGIKEIGNTLIIESVKE---MYNEVKKYMKENEEEYEELESELERNKKLKMKLEQLSKSR 340
Query: 94 HLDDRKKEHL 103
L+D++K HL
Sbjct: 341 RLNDQEKRHL 350
>ref|NP_076368.1| retinitis pigmentosa GTPase regulator interacting protein 1 [Mus
musculus] gi|44888535|sp|Q9EPQ2|RPGR1_MOUSE X-linked
retinitis pigmentosa GTPase regulator-interacting
protein 1 (RPGR-interacting protein 1)
gi|11496167|gb|AAG22857.1| RPGR-interacting protein [Mus
musculus]
Length = 1331
Score = 40.0 bits (92), Expect = 0.013
Identities = 23/72 (31%), Positives = 46/72 (62%), Gaps = 1/72 (1%)
Query: 30 EAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYLKL 89
EA K +G +K ++ G EEV++E V+ +E +E+E E +KE + ++E+ R ++ + +
Sbjct: 903 EAEKPEGEEKEEE-GGEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEK 961
Query: 90 SSEEHLDDRKKE 101
EE D++++E
Sbjct: 962 EEEEEEDEKEEE 973
Score = 32.7 bits (73), Expect = 2.1
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 28 GREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYL 87
G E K++ +++ ++ EE KE + +E +E+E E KE K ++E+ K+ +
Sbjct: 917 GEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEEEE 976
Query: 88 KLSSEEHLDDRKKEHL 103
+ EE +D K+ L
Sbjct: 977 EEEEEEEEEDENKDVL 992
>dbj|BAC26697.1| unnamed protein product [Mus musculus]
Length = 695
Score = 40.0 bits (92), Expect = 0.013
Identities = 23/72 (31%), Positives = 46/72 (62%), Gaps = 1/72 (1%)
Query: 30 EAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYLKL 89
EA K +G +K ++ G EEV++E V+ +E +E+E E +KE + ++E+ R ++ + +
Sbjct: 267 EAEKPEGEEKEEE-GGEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEK 325
Query: 90 SSEEHLDDRKKE 101
EE D++++E
Sbjct: 326 EEEEEEDEKEEE 337
Score = 32.7 bits (73), Expect = 2.1
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 28 GREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYL 87
G E K++ +++ ++ EE KE + +E +E+E E KE K ++E+ K+ +
Sbjct: 281 GEEEVKEEEVEEEEEEEEEEEEVKEEKEEEEEEEREEEEEKEEEKEEEEEEDEKEEEEEE 340
Query: 88 KLSSEEHLDDRKKEHL 103
+ EE +D K+ L
Sbjct: 341 EEEEEEEEEDENKDVL 356
>ref|XP_652429.1| hypothetical protein 118.t00021 [Entamoeba histolytica HM-1:IMSS]
gi|56469281|gb|EAL47043.1| hypothetical protein
118.t00021 [Entamoeba histolytica HM-1:IMSS]
Length = 539
Score = 39.7 bits (91), Expect = 0.017
Identities = 27/98 (27%), Positives = 52/98 (52%), Gaps = 3/98 (3%)
Query: 6 GSGSSRSKRSHKDSVGSSARPMGREAAKKKGIKKSKDVAGLEE--VEKEWVQFKEIKEQE 63
GS +S + K S+ S+ E +KK ++ + + + E +E+ + K+IK++
Sbjct: 414 GSSELKSNQKKKSSLSDSSLKNVFEGMEKKHKERMESLKKIREKRIEQMKEKKKQIKKEW 473
Query: 64 IEHLKEYTKVQQEKNRLKKMKMYLKLSSEEHLDDRKKE 101
+ KE+ + ++E+ R K++K LK +E RKKE
Sbjct: 474 SSNWKEFKETREEEKRKKELKKVLKKEKKEE-KKRKKE 510
>emb|CAA94113.1| Hypothetical protein C11G6.3 [Caenorhabditis elegans]
gi|17550336|ref|NP_510658.1| TBP-Associated
transcription Factor family member (taf-3)
[Caenorhabditis elegans] gi|7495866|pir||T19201
hypothetical protein C11G6.3 - Caenorhabditis elegans
Length = 385
Score = 39.3 bits (90), Expect = 0.023
Identities = 25/91 (27%), Positives = 45/91 (48%), Gaps = 5/91 (5%)
Query: 11 RSKRSHKDSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEY 70
+ R H+D R +E +++ K+ +D A E EK + K + E+E E KE
Sbjct: 134 KKDREHRDREKERERDERKERERQQKEKEREDAARREIEEKAEMDAKRVAEEEEERRKEK 193
Query: 71 TKVQQEKNRLKKMKMYLKLSSEEHLDDRKKE 101
K ++EK + K++ L +E + ++KE
Sbjct: 194 EKRREEKKKQKEL-----LKEKERSERKEKE 219
>gb|EAL22384.1| hypothetical protein CNBB5570 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1561
Score = 39.3 bits (90), Expect = 0.023
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 7 SGSSRSKRS-HKDSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIE 65
S S +SK S H +SVG G E A+ +G +K KD +E V+ ++ K++EIE
Sbjct: 1415 SASMQSKASNHGESVGLGIIAKGDEDAESEGKEKDKDEENVEGGPGRGVKEEDEKQKEIE 1474
Query: 66 HLKEYTKV-QQEKNRLKKMKMYLKLSSEEHLDD 97
++ +K +E++ + + + L ++ E+ DD
Sbjct: 1475 RAEKTSKAWPEEESEIFRKGVQLGVADEDEDDD 1507
>dbj|BAA95789.1| KED [Nicotiana tabacum]
Length = 513
Score = 39.3 bits (90), Expect = 0.023
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 13 KRSHKDSVGSSARPMGREAAKKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTK 72
K +K+S R E +KG+KK K+ E+ EK+ + K+ ++E E K+ K
Sbjct: 209 KGKNKESDEEDERQTEEEENDEKGVKKDKEKKNKEKKEKKDNEKKDKSKEETEEEKDDEK 268
Query: 73 VQQEKNRLKKMKMYLKLSSEEHLDDRKKE 101
++K++ KK K K ++ D+ KE
Sbjct: 269 -GEKKDKEKKCKKNKKEKKDKETKDKSKE 296
>ref|XP_655698.1| hypothetical protein 24.t00040 [Entamoeba histolytica HM-1:IMSS]
gi|56472855|gb|EAL50313.1| hypothetical protein
24.t00040 [Entamoeba histolytica HM-1:IMSS]
Length = 1053
Score = 38.9 bits (89), Expect = 0.030
Identities = 30/89 (33%), Positives = 43/89 (47%), Gaps = 9/89 (10%)
Query: 26 PMGREAAKKKGIKKSKDVAGLE--EVEKEWVQFKEIKEQE-------IEHLKEYTKVQQE 76
P E +KK KK + E E+EKE V KE KE+E I+ K+ ++E
Sbjct: 847 PKTEEKKEKKSKKKEAKIVEKEKEEIEKEEVSIKETKEEETKEDKKAIKKPKDENVEKKE 906
Query: 77 KNRLKKMKMYLKLSSEEHLDDRKKEHLVK 105
K KK + + KLS EE +K++ K
Sbjct: 907 KKEAKKEEGHKKLSKEEKKALKKQKKAKK 935
>ref|XP_641606.1| hypothetical protein DDB0205993 [Dictyostelium discoideum]
gi|60469635|gb|EAL67624.1| hypothetical protein
DDB0205993 [Dictyostelium discoideum]
Length = 1361
Score = 38.5 bits (88), Expect = 0.039
Identities = 25/79 (31%), Positives = 47/79 (58%), Gaps = 1/79 (1%)
Query: 33 KKKGIKKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYL-KLSS 91
K+K K+ K+ E++EKE ++ +++++++ E L++ K ++EK RLKK K L KL S
Sbjct: 1043 KEKLEKEKKEKLEKEKLEKERLEKEKLEKEKKEKLEKEKKEKEEKERLKKEKENLEKLKS 1102
Query: 92 EEHLDDRKKEHLVKHIWTK 110
+ ++ K I+ K
Sbjct: 1103 KSKSPSKETSKKEKTIFVK 1121
Score = 32.0 bits (71), Expect = 3.6
Identities = 30/112 (26%), Positives = 51/112 (44%), Gaps = 16/112 (14%)
Query: 4 NVGSGSSRSKRSHKDSVGSSARPMGREAAK-------KKGIKKSKDVAGLEEVEKEWVQF 56
N+ S+SK K++ +E K +K +KK K+ EE E+E V
Sbjct: 1096 NLEKLKSKSKSPSKETSKKEKTIFVKEEEKEVKKEKEEKEVKKEKEEK--EEEEEEEVIE 1153
Query: 57 KEIKEQEIEHLKEYTKVQQEKNR-------LKKMKMYLKLSSEEHLDDRKKE 101
K IK++ + TK Q K+ ++K K +K S+E + D+++E
Sbjct: 1154 KPIKKKSSTPIPTPTKSSQNKSSSTPTKSPIQKKKSIIKQESDEEMKDQEQE 1205
>ref|XP_635574.1| hypothetical protein DDB0189046 [Dictyostelium discoideum]
gi|60463901|gb|EAL62069.1| hypothetical protein
DDB0189046 [Dictyostelium discoideum]
Length = 832
Score = 38.5 bits (88), Expect = 0.039
Identities = 20/59 (33%), Positives = 39/59 (65%), Gaps = 1/59 (1%)
Query: 47 EEVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYLKLSSEEHLDDRKKEHLVK 105
E+ EKE + KE KE+++E+ ++ K +EK ++K + +KL ++H+D+ +KE +K
Sbjct: 315 EKEEKEEKEEKEEKEEKVENDEKEEKQDKEKE-IEKEEQIIKLYEKDHIDNNEKEKKLK 372
>emb|CAG91077.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50427907|ref|XP_462566.1| unnamed protein product
[Debaryomyces hansenii]
Length = 302
Score = 38.1 bits (87), Expect = 0.051
Identities = 31/138 (22%), Positives = 53/138 (37%), Gaps = 36/138 (26%)
Query: 2 GGNVGSGSSRSKRSHKDSVGSSARPMGREAAKKKGIKKSKDVAGLE-------------- 47
G N G S R+ R S P E++ K+ + K +D+ GLE
Sbjct: 109 GYNKGKSSGRNPRKQVQKKKSKHAPS--ESSSKRPVSKVRDIGGLESKSMYRDIRFDPAY 166
Query: 48 ------EVEKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYLKLSS---------- 91
EV K + + ++QE++ +++ K + + K K+ K+ S
Sbjct: 167 GKANLDEVRKNYSFLDDYRQQEVQEMEQVLKKDRNLSHFNKQKLEFKVQSLKSRLDTLNN 226
Query: 92 ----EEHLDDRKKEHLVK 105
+ L + KKE L K
Sbjct: 227 RDLENKILSEHKKEQLAK 244
>emb|CAE70892.1| Hypothetical protein CBG17683 [Caenorhabditis briggsae]
Length = 385
Score = 38.1 bits (87), Expect = 0.051
Identities = 23/89 (25%), Positives = 47/89 (51%), Gaps = 9/89 (10%)
Query: 18 DSVGSSARPMGREAAKKKGI-----KKSKDVAGLEEVEKEWVQFKEIKEQEIEHLKEYTK 72
+SV + A P+ +AA K + K +K+ GL E +++++ E+ +E + L +
Sbjct: 208 ESVQAGANPVDLDAADKLALELEEDKSAKEAVGLTETNEQYIKDLEVALKEFQSLSK--- 264
Query: 73 VQQEKNRLKKMKMYLKLSSEEHLDDRKKE 101
+K ++KK+K S EE ++ ++E
Sbjct: 265 -AYDKEKMKKLKRKDSSSEEEEEEEEEEE 292
>gb|AAP78929.1| At5g38880 [Arabidopsis thaliana]
Length = 775
Score = 37.7 bits (86), Expect = 0.066
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 15 SHKDSVGSSARPMGREAAKKKGIKKSKDVAG----LEEVEKEWVQFKEIKEQEIEHLKEY 70
S S+GSS P G+E +K KG +K K V G E + +Q +E+ +E+E L+
Sbjct: 61 SSNASIGSSVNP-GKEESKSKGRRKDKTVTGESSSYAEDREAALQERELAAKEVERLRNI 119
Query: 71 TKVQQEKNRLKKMKMYLKLSSEEHLDDRKKEH 102
+ Q++ + + +++ + + + + D + +
Sbjct: 120 VRRQRKDLKARMLEVSREEAERKRMLDERANY 151
>ref|XP_234092.3| PREDICTED: similar to intracellular membrane-associated
calcium-independent phospholipase A2 gamma [Rattus
norvegicus]
Length = 737
Score = 37.7 bits (86), Expect = 0.066
Identities = 22/63 (34%), Positives = 30/63 (46%), Gaps = 2/63 (3%)
Query: 50 EKEWVQFKEIKEQEIEHLKEYTKVQQEKNRLKKMKMYLKLSSEEHLDDRKKEHLVKHIWT 109
++ W++ K +K Q IE LK Y+ EKN + K Y EE D H I T
Sbjct: 100 DRGWLKHKNVK-QAIESLKNYSDKSAEKNSFAEQKSYF-ADKEEGSDKHSLYHYAYRITT 157
Query: 110 KFG 112
+FG
Sbjct: 158 RFG 160
>dbj|BAB08644.1| unnamed protein product [Arabidopsis thaliana]
gi|30693316|ref|NP_198704.2| expressed protein
[Arabidopsis thaliana]
Length = 796
Score = 37.7 bits (86), Expect = 0.066
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 15 SHKDSVGSSARPMGREAAKKKGIKKSKDVAG----LEEVEKEWVQFKEIKEQEIEHLKEY 70
S S+GSS P G+E +K KG +K K V G E + +Q +E+ +E+E L+
Sbjct: 82 SSNASIGSSVNP-GKEESKSKGRRKDKTVTGESSSYAEDREAALQERELAAKEVERLRNI 140
Query: 71 TKVQQEKNRLKKMKMYLKLSSEEHLDDRKKEH 102
+ Q++ + + +++ + + + + D + +
Sbjct: 141 VRRQRKDLKARMLEVSREEAERKRMLDERANY 172
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.309 0.127 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,386,009
Number of Sequences: 2540612
Number of extensions: 7498713
Number of successful extensions: 58274
Number of sequences better than 10.0: 1193
Number of HSP's better than 10.0 without gapping: 211
Number of HSP's successfully gapped in prelim test: 1016
Number of HSP's that attempted gapping in prelim test: 53847
Number of HSP's gapped (non-prelim): 3995
length of query: 116
length of database: 863,360,394
effective HSP length: 92
effective length of query: 24
effective length of database: 629,624,090
effective search space: 15110978160
effective search space used: 15110978160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC126782.12