BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126781.3 + phase: 0
(77 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43697.1| putative light-inducible protein ATLS1 [Arabidop... 104 7e-22
dbj|BAD53998.1| putative light-inducible protein ATLS1 [Oryza sa... 92 4e-18
emb|CAB82281.1| light-inducible protein ATLS1 [Arabidopsis thali... 90 2e-17
emb|CAA41632.1| AT-LS1 product [Arabidopsis thaliana] 87 8e-17
emb|CAB46355.1| macrophage migration inhibitory factor-like prot... 68 7e-11
gb|AAP33793.1| macrophage migration inhibitory factor [Petromyzo... 64 8e-10
emb|CAC70155.1| Bm-MIF-1; Brugia malayi MIF-1 64 1e-09
gb|AAK19154.2| macrophage migration inhibitory factor [Amblyomma... 62 5e-09
gb|AAC82502.1| macrophage migration inhibitory factor [Brugia ma... 62 5e-09
pdb|1HFO|F Chain F, The Structure Of The Macrophage Migration In... 61 6e-09
gb|AAK66563.1| macrophage migration inhibitory factor-1 [Onchoce... 61 8e-09
gb|AAL12629.1| macrophage migration inhibitory factor-like prote... 59 2e-08
ref|YP_172221.1| hypothetical protein syc1511_d [Synechococcus e... 59 2e-08
emb|CAE06891.1| possible ATLS1-like light-inducible protein [Syn... 59 2e-08
emb|CAB63152.1| LS1-like protein [Arabidopsis thaliana] gi|11358... 59 3e-08
gb|AAM60978.1| LS1-like protein [Arabidopsis thaliana] gi|264503... 59 3e-08
emb|CAB46354.1| macrophage migration inhibitory factor like prot... 59 3e-08
ref|YP_115190.1| phenylpyruvate tautomerase, putative [Methyloco... 57 9e-08
emb|CAE20678.1| possible ATLS1-like light-inducible protein [Pro... 57 1e-07
gb|AAC82615.1| macrophage migration inhibitory factor [Wuchereri... 57 1e-07
>dbj|BAC43697.1| putative light-inducible protein ATLS1 [Arabidopsis thaliana]
gi|8843819|dbj|BAA97367.1| light-inducible protein
ATLS1-like [Arabidopsis thaliana]
gi|28416857|gb|AAO42959.1| At5g57170 [Arabidopsis
thaliana] gi|15242048|ref|NP_200527.1| macrophage
migration inhibitory factor family protein / MIF family
protein [Arabidopsis thaliana]
Length = 115
Score = 104 bits (259), Expect = 7e-22
Identities = 53/75 (70%), Positives = 58/75 (76%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
IL+N GV IAF GTEEPAAYGELISIGGL P VN KLS TI++I+Q L I SSRFYIKF
Sbjct: 41 ILLNSGVPIAFAGTEEPAAYGELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKF 100
Query: 63 SDVQPSFVGFNGSTF 77
D F G+NGSTF
Sbjct: 101 YDSPRPFFGYNGSTF 115
>dbj|BAD53998.1| putative light-inducible protein ATLS1 [Oryza sativa (japonica
cultivar-group)]
Length = 115
Score = 91.7 bits (226), Expect = 4e-18
Identities = 41/75 (54%), Positives = 58/75 (76%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
+ ++G V ++F +EEPAAYGEL+SIGG+ P VN KLS+ +A+I++T L + SRFY+KF
Sbjct: 41 VSISGSVPMSFAASEEPAAYGELMSIGGIGPGVNGKLSAALAEILETKLSVSRSRFYVKF 100
Query: 63 SDVQPSFVGFNGSTF 77
DV+ +GFNGSTF
Sbjct: 101 DDVKGFNLGFNGSTF 115
>emb|CAB82281.1| light-inducible protein ATLS1 [Arabidopsis thaliana]
gi|20148493|gb|AAM10137.1| light-inducible protein ATLS1
[Arabidopsis thaliana] gi|17065566|gb|AAL32937.1|
light-inducible protein ATLS1 [Arabidopsis thaliana]
gi|15241023|ref|NP_195785.1| macrophage migration
inhibitory factor family protein / MIF family protein
[Arabidopsis thaliana] gi|11281345|pir||T48186
light-inducible protein ATLS1 - Arabidopsis thaliana
Length = 115
Score = 89.7 bits (221), Expect = 2e-17
Identities = 40/74 (54%), Positives = 58/74 (78%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
I++ G V ++FGGTE+PAAYGEL+SIGGL+ VN KLS+ ++ I++T L + SRF++KF
Sbjct: 41 IVLKGSVPMSFGGTEDPAAYGELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKF 100
Query: 63 SDVQPSFVGFNGST 76
D + SF G+NG+T
Sbjct: 101 YDTKGSFFGWNGAT 114
>emb|CAA41632.1| AT-LS1 product [Arabidopsis thaliana]
Length = 115
Score = 87.4 bits (215), Expect = 8e-17
Identities = 39/74 (52%), Positives = 57/74 (76%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
I++ G V ++FGGTE+PAAYGEL+SIGGL+ VN KLS+ ++ I+ T L + SRF++KF
Sbjct: 41 IVLKGSVPMSFGGTEDPAAYGELVSIGGLNADVNKKLSAAVSAILDTKLSVPKSRFFLKF 100
Query: 63 SDVQPSFVGFNGST 76
+ + SF G+NG+T
Sbjct: 101 YETKGSFFGWNGAT 114
>emb|CAB46355.1| macrophage migration inhibitory factor-like protein [Trichuris
trichiura]
Length = 114
Score = 67.8 bits (164), Expect = 7e-11
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 1 MCILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYI 60
+ + +NGG I FGGT+ PA +G+L+S+GG+ N S+ + + + L I +R YI
Sbjct: 38 VAVHINGGQKITFGGTDAPAGFGQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYI 97
Query: 61 KFSDVQPSFVGFNGSTF 77
F D++ S VG+NGSTF
Sbjct: 98 NFVDMRGSDVGYNGSTF 114
>gb|AAP33793.1| macrophage migration inhibitory factor [Petromyzon marinus]
Length = 115
Score = 64.3 bits (155), Expect = 8e-10
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 8 GVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKFSDVQP 67
G ++FGGT+EP A L SIG + P N K S+ +++ + T+L I R YI F + P
Sbjct: 45 GQLMSFGGTKEPCALAHLSSIGKISPAENKKYSALLSEAMNTHLGIPKDRMYIAFHNQDP 104
Query: 68 SFVGFNGSTF 77
+ VG+NGSTF
Sbjct: 105 ANVGWNGSTF 114
>emb|CAC70155.1| Bm-MIF-1; Brugia malayi MIF-1
Length = 115
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
I VNGG A+ FGG+E+P A L SIG + P VN + + +++ L I +R YI+F
Sbjct: 40 IHVNGGQAMVFGGSEDPCAVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEF 99
Query: 63 SDVQPSFVGFNGSTF 77
D++ S + FNGSTF
Sbjct: 100 VDIEASSMAFNGSTF 114
>gb|AAK19154.2| macrophage migration inhibitory factor [Amblyomma americanum]
gi|11065782|gb|AAG28339.1| macrophage migration
inhibitory factor; MIF [Amblyomma americanum]
Length = 116
Score = 61.6 bits (148), Expect = 5e-09
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 5 VNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKFSD 64
+N ++FGGT++P A L SIG L P N K S+ + + I+ L I +R YI + D
Sbjct: 42 INADQLLSFGGTDDPCAIANLYSIGCLSPKENKKHSAVLFEHIEKTLGIKENRMYINYFD 101
Query: 65 VQPSFVGFNGSTF 77
+ S VG+NG TF
Sbjct: 102 MPASDVGYNGKTF 114
>gb|AAC82502.1| macrophage migration inhibitory factor [Brugia malayi]
gi|2190976|gb|AAB60943.1| macrophage migration
inhibitory factor [Brugia malayi]
gi|2829751|sp|P91850|MIFH_BRUMA Macrophage migration
inhibitory factor homolog (BmMIF) (Bm-MIF-1)
Length = 115
Score = 61.6 bits (148), Expect = 5e-09
Identities = 32/74 (43%), Positives = 46/74 (61%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
I VNGG A+ FGG+E+P A L SIG + P VN + + +++ L I +R YI+F
Sbjct: 40 IHVNGGQAMVFGGSEDPCAVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEF 99
Query: 63 SDVQPSFVGFNGST 76
D++ S + FNGST
Sbjct: 100 VDIEASSMAFNGST 113
>pdb|1HFO|F Chain F, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis. gi|15826600|pdb|1HFO|E
Chain E, The Structure Of The Macrophage Migration
Inhibitory Factor From Trichinella Spiralis.
gi|15826599|pdb|1HFO|D Chain D, The Structure Of The
Macrophage Migration Inhibitory Factor From Trichinella
Spiralis. gi|15826598|pdb|1HFO|C Chain C, The Structure
Of The Macrophage Migration Inhibitory Factor From
Trichinella Spiralis. gi|15826597|pdb|1HFO|B Chain B,
The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis. gi|15826596|pdb|1HFO|A
Chain A, The Structure Of The Macrophage Migration
Inhibitory Factor From Trichinella Spiralis
Length = 113
Score = 61.2 bits (147), Expect = 6e-09
Identities = 29/77 (37%), Positives = 48/77 (61%)
Query: 1 MCILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYI 60
+ + +N ++FGG+ PAA+G L+SIGG++P+ N S+ + + T L I +R YI
Sbjct: 37 VAVHINTDQQLSFGGSTNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYI 96
Query: 61 KFSDVQPSFVGFNGSTF 77
F ++ VG+NG+TF
Sbjct: 97 HFVNLNGDDVGWNGTTF 113
>gb|AAK66563.1| macrophage migration inhibitory factor-1 [Onchocerca volvulus]
Length = 115
Score = 60.8 bits (146), Expect = 8e-09
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 1 MCILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYI 60
+ I VNGG A+ FGG+ +P A L SIG + P VN S + +++ L I +R YI
Sbjct: 38 VAIHVNGGQAMVFGGSTDPCAVCVLKSIGCVGPNVNNSHSEKLFKLLADELKIPKNRCYI 97
Query: 61 KFSDVQPSFVGFNGSTF 77
+F ++ S + FNGSTF
Sbjct: 98 EFVNIDASTMAFNGSTF 114
>gb|AAL12629.1| macrophage migration inhibitory factor-like protein [Trichinella
spiralis]
Length = 114
Score = 59.3 bits (142), Expect = 2e-08
Identities = 28/77 (36%), Positives = 48/77 (61%)
Query: 1 MCILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYI 60
+ + +N ++FGG+ +PAA+G L+SIGG++P+ N S+ + + L I +R YI
Sbjct: 38 VAVHINTDQQLSFGGSTKPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97
Query: 61 KFSDVQPSFVGFNGSTF 77
F ++ VG+NG+TF
Sbjct: 98 HFVNLNGDDVGWNGTTF 114
>ref|YP_172221.1| hypothetical protein syc1511_d [Synechococcus elongatus PCC 6301]
gi|56686479|dbj|BAD79701.1| hypothetical protein
[Synechococcus elongatus PCC 6301]
gi|46129413|ref|ZP_00202033.1| hypothetical protein
Selo03002652 [Synechococcus elongatus PCC 7942]
Length = 117
Score = 59.3 bits (142), Expect = 2e-08
Identities = 31/74 (41%), Positives = 42/74 (55%)
Query: 4 LVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKFS 63
L+ V + F GT PA Y E+ S+G + PT A++S I + L I S R YI+F+
Sbjct: 43 LLETDVPMTFAGTTAPACYVEIKSVGQMKPTQTAQMSRLFCNQIASELGIASDRIYIEFA 102
Query: 64 DVQPSFVGFNGSTF 77
D Q G+NGSTF
Sbjct: 103 DAQGYLWGWNGSTF 116
>emb|CAE06891.1| possible ATLS1-like light-inducible protein [Synechococcus sp. WH
8102] gi|33864912|ref|NP_896471.1| possible ATLS1-like
light-inducible protein [Synechococcus sp. WH 8102]
Length = 131
Score = 59.3 bits (142), Expect = 2e-08
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 4 LVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKFS 63
L++ GV + F G+EEP AY E+ SIG L P +S ++I+++L I R YI F
Sbjct: 60 LLDSGVPMTFAGSEEPCAYVEVKSIGALTPPA---MSDQFCELIKSSLGIPKDRIYIGFD 116
Query: 64 DVQPSFVGFNGSTF 77
DV S G+NG TF
Sbjct: 117 DVNASNWGWNGRTF 130
>emb|CAB63152.1| LS1-like protein [Arabidopsis thaliana] gi|11358491|pir||T46062
LS1-like protein - Arabidopsis thaliana
Length = 134
Score = 58.9 bits (141), Expect = 3e-08
Identities = 25/63 (39%), Positives = 40/63 (62%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
+++ G V I FGG +E AAY E++S+GG+ V +L +T+ I+ T+ IH +RF K
Sbjct: 63 VVLKGSVEIVFGGNKEAAAYAEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKV 122
Query: 63 SDV 65
D+
Sbjct: 123 FDI 125
>gb|AAM60978.1| LS1-like protein [Arabidopsis thaliana] gi|26450314|dbj|BAC42273.1|
putative LS1 [Arabidopsis thaliana]
gi|28827214|gb|AAO50451.1| putative macrophage migration
inhibitory factor (MIF) [Arabidopsis thaliana]
gi|18409398|ref|NP_566955.1| macrophage migration
inhibitory factor family protein / MIF family protein
[Arabidopsis thaliana]
Length = 112
Score = 58.9 bits (141), Expect = 3e-08
Identities = 25/63 (39%), Positives = 40/63 (62%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
+++ G V I FGG +E AAY E++S+GG+ V +L +T+ I+ T+ IH +RF K
Sbjct: 41 VVLKGSVEIVFGGNKEAAAYAEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKV 100
Query: 63 SDV 65
D+
Sbjct: 101 FDI 103
>emb|CAB46354.1| macrophage migration inhibitory factor like protein [Trichinella
spiralis]
Length = 114
Score = 58.9 bits (141), Expect = 3e-08
Identities = 28/77 (36%), Positives = 47/77 (60%)
Query: 1 MCILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYI 60
+ + +N ++FGG+ PAA+G L+SIGG++P+ N S+ + + L I +R YI
Sbjct: 38 VAVHINTDQQLSFGGSTNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYI 97
Query: 61 KFSDVQPSFVGFNGSTF 77
F ++ VG+NG+TF
Sbjct: 98 HFVNLNGDDVGWNGTTF 114
>ref|YP_115190.1| phenylpyruvate tautomerase, putative [Methylococcus capsulatus str.
Bath] gi|53756802|gb|AAU91093.1| putative phenylpyruvate
tautomerase [Methylococcus capsulatus str. Bath]
Length = 114
Score = 57.4 bits (137), Expect = 9e-08
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 10 AIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKFSDVQPSF 69
A+ F GT+EPAA+ EL SIG L LS T+ ++Q + I +R YI+F+DV F
Sbjct: 48 AMLFAGTDEPAAFVELKSIG-LPAGKTKALSQTLCSLLQDSAGIAPARVYIEFTDVAGGF 106
Query: 70 VGFNGSTF 77
G+NGSTF
Sbjct: 107 WGWNGSTF 114
>emb|CAE20678.1| possible ATLS1-like light-inducible protein [Prochlorococcus
marinus str. MIT 9313] gi|33862776|ref|NP_894336.1|
possible ATLS1-like light-inducible protein
[Prochlorococcus marinus str. MIT 9313]
Length = 115
Score = 57.0 bits (136), Expect = 1e-07
Identities = 30/70 (42%), Positives = 39/70 (54%)
Query: 8 GVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKFSDVQP 67
GV + F G EP Y E+ SIG LD + ++S + I+ NL I + R YI F DV
Sbjct: 45 GVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGFEDVPA 104
Query: 68 SFVGFNGSTF 77
G+NGSTF
Sbjct: 105 RLWGWNGSTF 114
>gb|AAC82615.1| macrophage migration inhibitory factor [Wuchereria bancrofti]
gi|6685646|sp|O44786|MIFH_WUCBA Macrophage migration
inhibitory factor homolog
Length = 115
Score = 57.0 bits (136), Expect = 1e-07
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 3 ILVNGGVAIAFGGTEEPAAYGELISIGGLDPTVNAKLSSTIAQIIQTNLHIHSSRFYIKF 62
I VNGG + FGG+E+P L SIG + P VN + + +++ L I +R YI+
Sbjct: 40 IHVNGGQPMVFGGSEDPCPVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIES 99
Query: 63 SDVQPSFVGFNGSTF 77
D++ S + FNGSTF
Sbjct: 100 VDIEASSMAFNGSTF 114
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.139 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,075,591
Number of Sequences: 2540612
Number of extensions: 3794374
Number of successful extensions: 12499
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 12415
Number of HSP's gapped (non-prelim): 81
length of query: 77
length of database: 863,360,394
effective HSP length: 53
effective length of query: 24
effective length of database: 728,707,958
effective search space: 17488990992
effective search space used: 17488990992
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC126781.3