BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126019.13 - phase: 0
(367 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_470142.1| putative DNA-binding protein [Oryza sativa (jap... 241 2e-62
emb|CAB85983.1| putative zinc finger protein [Arabidopsis thalia... 223 7e-57
gb|AAC23629.1| putative DOF zinc finger protein [Arabidopsis tha... 208 2e-52
emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum] 201 3e-50
gb|AAU29474.1| At5g02460 [Arabidopsis thaliana] gi|48475048|gb|A... 201 4e-50
emb|CAC85946.1| dof zinc finger protein [Hordeum vulgare subsp. ... 187 3e-46
ref|NP_974442.1| Dof-type zinc finger domain-containing protein ... 184 3e-45
emb|CAB75895.1| zinc finger protein OBP3 [Arabidopsis thaliana] ... 183 8e-45
dbj|BAD94355.1| zinc finger protein OBP3 [Arabidopsis thaliana] ... 182 1e-44
ref|XP_477205.1| putative dof zinc finger protein [Oryza sativa ... 179 9e-44
gb|AAD38988.1| zinc finger protein OBP3 [Arabidopsis thaliana] g... 176 1e-42
gb|AAU44212.1| putative dof-type zinc finger domain-containing p... 167 5e-40
emb|CAA56288.1| Dof3 gene [Zea mays] gi|2130125|pir||S59853 DNA-... 165 2e-39
ref|NP_850126.1| Dof-type zinc finger domain-containing protein ... 163 7e-39
gb|AAC79586.1| putative DOF zinc finger protein [Arabidopsis tha... 161 3e-38
ref|NP_563792.3| Dof-type zinc finger domain-containing protein ... 156 8e-37
gb|AAF75094.1| Strong similarity to zinc finger protein OBP2 fro... 156 8e-37
gb|AAM65740.1| zinc finger protein OBP2 [Arabidopsis thaliana] 154 4e-36
gb|AAM13350.1| strong similarity to zinc finger protein OBP2 [Ar... 147 7e-34
emb|CAA66601.1| Zn finger protein [Nicotiana tabacum] gi|7489124... 143 9e-33
>ref|XP_470142.1| putative DNA-binding protein [Oryza sativa (japonica
cultivar-group)] gi|29124139|gb|AAO65880.1| putative
DNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 355
Score = 241 bits (616), Expect = 2e-62
Identities = 152/335 (45%), Positives = 192/335 (56%), Gaps = 42/335 (12%)
Query: 57 GGGSTG--SIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 114
GGG TG ++RPGSM++RAR+A +P PE LKCPRCESTNTKFCYFNNYSLSQPRHFCKT
Sbjct: 29 GGGPTGGTAVRPGSMTERARLAKIPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKT 88
Query: 115 CRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNN 174
CRRYWTRGGALRNVPVGGG RRNKR +KSS + +ST S A S TG SS+ S T+
Sbjct: 89 CRRYWTRGGALRNVPVGGGCRRNKR-TKSSKSSSST-SAAGSASATGGTSSSTSSTATGG 146
Query: 175 IHSSADILGLTPQMSSLRFMTPLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGG 234
S+A + P + L F+ LHH + + G GF + + + LGG
Sbjct: 147 SSSAAAAAAMMPPQAQLPFLASLHHPLGGGDHYSSGAS---RLGFPGLSSLDPVDYQLGG 203
Query: 235 NSILSSS-GLEQWRMPMSMTHQQHQFPFLAN---LEGTNSNLYPFEGNVQNHEMITSGGY 290
+ +++ GLEQWR+P Q QFPFL+ + S +YPF+ +G
Sbjct: 204 GAAAAAAIGLEQWRLP-----QIQQFPFLSRNDAMPPPMSGIYPFDAEAAADAAGFAGQL 258
Query: 291 VR-PKVISTSGIMTQLASVKMEDSINRGFLGINTSNNN--SNQGSEQFW----------N 337
+ KV +SG++TQLASVKMEDS N +N+S G+ QFW N
Sbjct: 259 LAGTKVPGSSGLITQLASVKMEDS-NAQSAAMNSSPREFLGLPGNLQFWGGGNGAGPGGN 317
Query: 338 SAVVTGNSAA-----------NWTDHVSGFSSSSN 361
TG S A W D +SGF+SSS+
Sbjct: 318 GDGATGGSGAGVAPGGGGSGGGWAD-LSGFNSSSS 351
>emb|CAB85983.1| putative zinc finger protein [Arabidopsis thaliana]
gi|15241827|ref|NP_195866.1| Dof-type zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|11358705|pir||T48267 probable zinc finger protein -
Arabidopsis thaliana gi|55583994|sp|Q9LZ56|DOF51_ARATH
Dof zinc finger protein DOF5.1 (AtDOF5.1)
Length = 399
Score = 223 bits (568), Expect = 7e-57
Identities = 155/390 (39%), Positives = 204/390 (51%), Gaps = 79/390 (20%)
Query: 33 GGSVSQQLLQTQTPPPQQSQSQPH------------GGGSTGSIRPGSMSDRARMANMPM 80
G +++QQ L PPQQ Q+ P GG G IRPGSM++RAR+AN+P+
Sbjct: 31 GNNINQQFLPHHPLPPQQQQTPPQLHHNNGNGGVAVPGGPGGLIRPGSMAERARLANIPL 90
Query: 81 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRS 140
PETALKCPRC+STNTKFCYFNNYSL+QPRHFCK CRRYWTRGGALR+VPVGGG RRNKR+
Sbjct: 91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRT 150
Query: 141 SKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSA---DILGLTPQMSSLRF---- 193
SS G + S +G++ S +S TSN+ H A + +G SSL
Sbjct: 151 KNSSGGGGGSTS-------SGNSKSQDSATSNDQYHHRAMANNQMGPPSSSSSLSSLLSS 203
Query: 194 ----MTPLHHNFSNPNDFVGGG------------DLGLNYGFSYMGGVG----DLGSALG 233
+ P H + SN N+ +G G D N+ Y G V +G
Sbjct: 204 YNAGLIPGHDHNSNNNNILGLGSSLPPLKLMPPLDFTDNFTLQY-GAVSAPSYHIGGGSS 262
Query: 234 GNSILSSSGLEQWRMPMSMTHQQHQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRP 293
G + +G +QWR P + +Q P L L+ + + E + ++T G RP
Sbjct: 263 GGAAALLNGFDQWRFPAT-----NQLP-LGGLDPFDQQ-HQMEQQNPGYGLVTGSGQYRP 315
Query: 294 KVI---------STSGIM-----TQLASVKMEDSINRGFLGINTSNNNSNQGSEQFWN-- 337
K I S S M +QLASVKMEDS N+ +N S +Q WN
Sbjct: 316 KNIFHNLISSSSSASSAMVTATASQLASVKMEDSNNQ----LNLSRQLFGD-EQQLWNIH 370
Query: 338 --SAVVTGNSAANWTDHVSGFSSSSNTTSN 365
+A T + ++W++ + FSSSS TSN
Sbjct: 371 GAAAASTAAATSSWSEVSNNFSSSS--TSN 398
>gb|AAC23629.1| putative DOF zinc finger protein [Arabidopsis thaliana]
gi|15224320|ref|NP_181295.1| Dof-type zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|7485442|pir||T02525 probable DOF zinc finger protein
[imported] - Arabidopsis thaliana
gi|55583796|sp|O80928|DOF24_ARATH Dof zinc finger
protein DOF2.4 (AtDOF2.4)
Length = 330
Score = 208 bits (529), Expect = 2e-52
Identities = 136/335 (40%), Positives = 189/335 (55%), Gaps = 40/335 (11%)
Query: 25 NHHQQPGNGGSVSQ-QLLQTQTPPPQQSQSQPH-------GGGSTGSIRPGSMSDRARMA 76
+++ G G S + +L+ Q P QQ Q QPH GGG GSIR GSM DRAR A
Sbjct: 21 SNYNHDGTGASANGGHVLRPQLQPQQQPQQQPHPNGSGGGGGGGGGSIRAGSMVDRARQA 80
Query: 77 NMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRR 136
N+ +PE ALKCPRCESTNTKFCYFNNYSL+QPRHFCKTCRRYWTRGGALRNVPVGGG RR
Sbjct: 81 NVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRR 140
Query: 137 NKRS-SKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMT 195
N+R+ S S+NN NST + ++ +G+AS+ ++I S++ + I L+ +S R M
Sbjct: 141 NRRTKSNSNNNNNSTATSNNTSFSSGNASTISTILSSHYGGNQESI--LSQILSPARLMN 198
Query: 196 PLHHNFSN--PNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMT 253
P +++ + N LNYG + + G S++S +++WR S +
Sbjct: 199 PTYNHLGDLTSNTKTDNNMSLLNYG-GLSQDLRSIHMGASGGSLMSC--VDEWR---SAS 252
Query: 254 HQQHQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVIS---TSGIMTQLASVKM 310
+ Q NLE +SN P + E P++ S +S + +Q +SVK+
Sbjct: 253 YHQQSSMGGGNLE-DSSNPNPSANGFYSFE--------SPRITSASISSALASQFSSVKV 303
Query: 311 EDSINRGFLGINTSNNNSNQGSEQFWNSAVVTGNS 345
ED+ + +N + N S+ WN G+S
Sbjct: 304 EDN---PYKWVNVNGNCSS------WNDLSAFGSS 329
>emb|CAB89831.1| Dof zinc finger protein [Solanum tuberosum]
Length = 324
Score = 201 bits (511), Expect = 3e-50
Identities = 140/338 (41%), Positives = 175/338 (51%), Gaps = 38/338 (11%)
Query: 21 LQQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMPM 80
LQQ + HQQ GN G + L PPP Q G S GSIRPGSM DRAR+A +P+
Sbjct: 18 LQQPDGHQQ-GNTGLENPTL----QPPPMQV------GASPGSIRPGSMVDRARLAKIPL 66
Query: 81 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRS 140
PE LKCPRC+STNTKFCYFNNY+LSQPRHFCKTCRRYWTRGGALR+VPVGGG RRNKR
Sbjct: 67 PEAGLKCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKR- 125
Query: 141 SKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLR--FMTPLH 198
SKS+NN NS+K+ S+ AS T+ TS + S +I+ S + +TPL
Sbjct: 126 SKSNNNNNSSKTAGSNVNTNTIASGTS--TSASPSSCSTEIMNGRHHFSHEQPPQLTPLM 183
Query: 199 HNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALG-GNSILSSSGLEQWRMPM-SMTHQQ 256
F N N GG + G G LG G I SS+ +P + Q
Sbjct: 184 AAFQNLNHHYGGFQPPPLVSTHHGNGTGALGHHHEMGFQIGSSTNTNNLPVPPGGGSDHQ 243
Query: 257 HQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMEDSINR 316
+ P LA N+NLYPF+ + +S + + + +N
Sbjct: 244 WRLPSLA----ANTNLYPFQHGTDQ------------GIHESSSVNNNNINAHDDQGLNS 287
Query: 317 GFLGINTSNNNSNQGSEQFWNSAVVTGNSAANWTDHVS 354
+ T NN+N Q+W TG S N + S
Sbjct: 288 TKQFLGTMENNTN----QYWGGNAWTGFSGLNSSSSAS 321
>gb|AAU29474.1| At5g02460 [Arabidopsis thaliana] gi|48475048|gb|AAT44131.1|
At5g02460 [Arabidopsis thaliana]
Length = 331
Score = 201 bits (510), Expect = 4e-50
Identities = 125/303 (41%), Positives = 163/303 (53%), Gaps = 54/303 (17%)
Query: 33 GGSVSQQLLQTQTPPPQQSQSQPH------------GGGSTGSIRPGSMSDRARMANMPM 80
G +++QQ L PPQQ Q+ P GG G IRPGSM++RAR+AN+P+
Sbjct: 31 GNNINQQFLPHHPLPPQQQQTPPQLHHNNGNGGVAVPGGPGGLIRPGSMAERARLANIPL 90
Query: 81 PETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRS 140
PETALKCPRC+STNTKFCYFNNYSL+QPRHFCK CRRYWTRGGALR+VPVGGG RRNKR+
Sbjct: 91 PETALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRT 150
Query: 141 SKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSA---DILGLTPQMSSLRF---- 193
SS G + S +G++ S +S TSN+ H A + +G SSL
Sbjct: 151 KNSSGGGGGSTS-------SGNSKSQDSATSNDQYHHRAMANNQMGPPSSSSSLSSLLSS 203
Query: 194 ----MTPLHHNFSNPNDFVGGG------------DLGLNYGFSYMGGVG----DLGSALG 233
+ P H + SN N+ +G G D N+ Y G V +G
Sbjct: 204 YNAGLIPGHDHNSNNNNILGLGSSLPPLKLMPPLDFTDNFTLQY-GAVSAPSYHIGGGSS 262
Query: 234 GNSILSSSGLEQWRMPMSMTHQQHQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRP 293
G + +G +QWR P + +Q P L L+ + + E + ++T G RP
Sbjct: 263 GGAAALLNGFDQWRFPAT-----NQLP-LGGLDPFDQQ-HQMEQQNPGYGLVTGSGQYRP 315
Query: 294 KVI 296
K I
Sbjct: 316 KNI 318
>emb|CAC85946.1| dof zinc finger protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 187 bits (476), Expect = 3e-46
Identities = 110/220 (50%), Positives = 129/220 (58%), Gaps = 11/220 (5%)
Query: 48 PQQSQSQPHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQ 107
P+ S + G RP SM++RARMA +P PE ALKCPRC+STNTKFCY+NNYSLSQ
Sbjct: 20 PRSSAANEAAAGQ--QTRPNSMTERARMARVPQPEPALKCPRCDSTNTKFCYYNNYSLSQ 77
Query: 108 PRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQ--TGSASS 165
PRHFCK CRRYWTRGGALR+VPVGGG RRNKRSSKSS S+ P+SS + G ASS
Sbjct: 78 PRHFCKACRRYWTRGGALRSVPVGGGCRRNKRSSKSSAGAASSSKPSSSSARQLPGGASS 137
Query: 166 TNSITSNNNIHSSADI-LGLTPQMSSLRFMTPLHHNFSNPNDFVGGG--DLGLNYGFSYM 222
S + A I GL+ L FM +H N G L + +M
Sbjct: 138 MPSTATTTLGPDGASIPPGLSSMSHHLPFMGAMHPPGPNLGLAFSAGLPQLAMQQHHHHM 197
Query: 223 GGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQQHQFPFL 262
GV A GG + +S LEQWR+ QQ QFPFL
Sbjct: 198 DGVDQFPLASGGGATFGAS-LEQWRV---QQQQQQQFPFL 233
>ref|NP_974442.1| Dof-type zinc finger domain-containing protein [Arabidopsis
thaliana]
Length = 354
Score = 184 bits (468), Expect = 3e-45
Identities = 137/368 (37%), Positives = 184/368 (49%), Gaps = 67/368 (18%)
Query: 22 QQQNHHQQP--GNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMP 79
QQ N HQ + + L Q +PP Q + R SM +RAR+A +P
Sbjct: 18 QQGNQHQLECVTTDQNPNNYLRQLSSPPTSQV-------AGSSQARVNSMVERARIAKVP 70
Query: 80 MPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKR 139
+PE AL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG+LRNVPVGGGFRRNKR
Sbjct: 71 LPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKR 130
Query: 140 SSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQM-SSLRFMTPLH 198
S S + ++ + T S +S S ++ + HS G P+ S+L + PL
Sbjct: 131 S--KSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHS----YGQIPEFNSNLPILPPLQ 184
Query: 199 ----HNFSNPN-DFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMT 253
+N SN DF G + G S GG+ L+ WR+P S
Sbjct: 185 SLGDYNSSNTGLDFGGTQISNMISGMSSSGGI-----------------LDAWRIPPS-- 225
Query: 254 HQQHQFPFLANLEG---TNSNLYPF---EGNV-QNHEMITSGGY-----VRPKVISTSG- 300
Q QFPFL N G +++ LYP +G V Q S Y +P + +SG
Sbjct: 226 QQAQQFPFLINTTGLVQSSNALYPLLEGKGGVNQGDSQQKSSDYSNQLMFKPLMDFSSGG 285
Query: 301 -IMTQLASVKMED-------------SINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSA 346
TQ +VK E+ +++R FLG N+ N+ + ++ TG ++
Sbjct: 286 VSATQTRNVKAEENDQDRGRDGDGVNNLSRNFLGNININSGRNEEYTSWGGNSSWTGFTS 345
Query: 347 ANWTDHVS 354
N T H+S
Sbjct: 346 NNSTGHLS 353
>emb|CAB75895.1| zinc finger protein OBP3 [Arabidopsis thaliana]
gi|11282341|pir||T47676 zinc finger protein OBP3 -
Arabidopsis thaliana
Length = 307
Score = 183 bits (464), Expect = 8e-45
Identities = 132/359 (36%), Positives = 176/359 (48%), Gaps = 78/359 (21%)
Query: 21 LQQQNHHQQP--GNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANM 78
+QQ N HQ + + L Q +PP Q + R SM +RAR+A +
Sbjct: 1 MQQGNQHQLECVTTDQNPNNYLRQLSSPPTSQV-------AGSSQARVNSMVERARIAKV 53
Query: 79 PMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNK 138
P+PE AL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG+LRNVPVGGGFRRNK
Sbjct: 54 PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNK 113
Query: 139 RSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQM-SSLRFMTPL 197
RS S + ++ + T S +S S ++ + HS G P+ S+L + PL
Sbjct: 114 RS--KSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHS----YGQIPEFNSNLPILPPL 167
Query: 198 H----HNFSNPN-DFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSM 252
+N SN DF G + G S GG+ L+ WR+P S
Sbjct: 168 QSLGDYNSSNTGLDFGGTQISNMISGMSSSGGI-----------------LDAWRIPPS- 209
Query: 253 THQQHQFPFLANLEG---TNSNLYP-FEGNVQNHEMITSGGYVRPKVISTSGIMTQLASV 308
Q QFPFL N G +++ LYP EG V TQ +V
Sbjct: 210 -QQAQQFPFLINTTGLVQSSNALYPLLEGGVS---------------------ATQTRNV 247
Query: 309 KMED-------------SINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSAANWTDHVS 354
K E+ +++R FLG N+ N+ + ++ TG ++ N T H+S
Sbjct: 248 KAEENDQDRGRDGDGVNNLSRNFLGNININSGRNEEYTSWGGNSSWTGFTSNNSTGHLS 306
>dbj|BAD94355.1| zinc finger protein OBP3 [Arabidopsis thaliana]
gi|42565953|ref|NP_191097.3| Dof-type zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|55584042|sp|Q9M2U1|DOF36_ARATH Dof zinc finger
protein DOF3.6 (AtDOF3.6) (OBF binding protein 3)
Length = 323
Score = 182 bits (462), Expect = 1e-44
Identities = 132/358 (36%), Positives = 175/358 (48%), Gaps = 78/358 (21%)
Query: 22 QQQNHHQQP--GNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMSDRARMANMP 79
QQ N HQ + + L Q +PP Q + R SM +RAR+A +P
Sbjct: 18 QQGNQHQLECVTTDQNPNNYLRQLSSPPTSQV-------AGSSQARVNSMVERARIAKVP 70
Query: 80 MPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKR 139
+PE AL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG+LRNVPVGGGFRRNKR
Sbjct: 71 LPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKR 130
Query: 140 SSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQM-SSLRFMTPLH 198
S S + ++ + T S +S S ++ + HS G P+ S+L + PL
Sbjct: 131 S--KSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHS----YGQIPEFNSNLPILPPLQ 184
Query: 199 ----HNFSNPN-DFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMT 253
+N SN DF G + G S GG+ L+ WR+P S
Sbjct: 185 SLGDYNSSNTGLDFGGTQISNMISGMSSSGGI-----------------LDAWRIPPS-- 225
Query: 254 HQQHQFPFLANLEG---TNSNLYP-FEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVK 309
Q QFPFL N G +++ LYP EG V TQ +VK
Sbjct: 226 QQAQQFPFLINTTGLVQSSNALYPLLEGGVS---------------------ATQTRNVK 264
Query: 310 MED-------------SINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSAANWTDHVS 354
E+ +++R FLG N+ N+ + ++ TG ++ N T H+S
Sbjct: 265 AEENDQDRGRDGDGVNNLSRNFLGNININSGRNEEYTSWGGNSSWTGFTSNNSTGHLS 322
>ref|XP_477205.1| putative dof zinc finger protein [Oryza sativa (japonica
cultivar-group)] gi|33146614|dbj|BAC79853.1| putative
dof zinc finger protein [Oryza sativa (japonica
cultivar-group)]
Length = 332
Score = 179 bits (455), Expect = 9e-44
Identities = 129/315 (40%), Positives = 156/315 (48%), Gaps = 83/315 (26%)
Query: 57 GGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCR 116
GGG S RP SM++RARMA +P PE LKCPRC+STNTKFCYFNNYSL+QPRHFCK CR
Sbjct: 25 GGGGASSARPVSMAERARMAKIPQPEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACR 84
Query: 117 RYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIH 176
RYWTRGGALRNVPVGGGFRRNKR +K SN +K PA
Sbjct: 85 RYWTRGGALRNVPVGGGFRRNKRGTKPSN----SKKPA---------------------- 118
Query: 177 SSADILGLTPQMSSLRFMTPLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSA----- 231
A + G M P H P F GGG G +G S +GG G G++
Sbjct: 119 --AAVAG--------GVMAPPHAQLQLPFGFDGGG--GGGHG-SIIGGGGGGGASRLGFP 165
Query: 232 --------------LGGNSILSSSGLEQWRMPMSMTHQQHQFPFLAN---------LEGT 268
LGG GLE+ R+P FPFLA L T
Sbjct: 166 ELSSLHAAAAVDYQLGGGGGGDGLGLERQRLP--------HFPFLARSNAAVHPPPLMST 217
Query: 269 NSNL-YPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMEDSINRGFLGINTSNNN 327
+ + YPF G+V + V ++G++TQ+ASVKM+D N T+ +
Sbjct: 218 AAGVSYPF-GDVAAGGLGGDMPANAASVAGSAGLITQMASVKMDDIDNHPPPSAATTTAS 276
Query: 328 SN------QGSEQFW 336
S +GS QFW
Sbjct: 277 SPIEFLGLRGSLQFW 291
>gb|AAD38988.1| zinc finger protein OBP3 [Arabidopsis thaliana]
gi|11282343|pir||T50640 zinc finger protein OBP3
[imported] - Arabidopsis thaliana
Length = 264
Score = 176 bits (445), Expect = 1e-42
Identities = 120/309 (38%), Positives = 159/309 (50%), Gaps = 69/309 (22%)
Query: 69 MSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNV 128
M +RAR+A +P+PE AL CPRC+STNTKFCYFNNYSL+QPRHFCKTCRRYWTRGG+LRNV
Sbjct: 1 MVERARIAKVPLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNV 60
Query: 129 PVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQM 188
PVGGGFRRNKRS S + ++ + T S +S S ++ + HS G P+
Sbjct: 61 PVGGGFRRNKRS--KSRSKSTVVVSTDNTTSTSSLTSRPSYSNPSKFHS----YGQIPEF 114
Query: 189 -SSLRFMTPLH----HNFSNPN-DFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSG 242
S+L + PL +N SN DF G + G S GG+
Sbjct: 115 NSNLPILPPLQSLGDYNSSNTGLDFGGTQISNMISGMSSSGGI----------------- 157
Query: 243 LEQWRMPMSMTHQQHQFPFLANLEG---TNSNLYP-FEGNVQNHEMITSGGYVRPKVIST 298
L+ WR+P S Q QFPFL N G +++ LYP EG V
Sbjct: 158 LDAWRIPPS--QQAQQFPFLINTTGLVQSSNALYPLLEGGVS------------------ 197
Query: 299 SGIMTQLASVKMED-------------SINRGFLGINTSNNNSNQGSEQFWNSAVVTGNS 345
TQ +VK E+ +++R FLG N+ N+ + ++ TG +
Sbjct: 198 ---ATQTRNVKAEENDQDRGRDGDGVNNLSRNFLGNININSGRNEEYTSWGGNSSWTGFT 254
Query: 346 AANWTDHVS 354
+ N T H+S
Sbjct: 255 SNNSTGHLS 263
>gb|AAU44212.1| putative dof-type zinc finger domain-containing protein [Oryza
sativa (japonica cultivar-group)]
Length = 290
Score = 167 bits (423), Expect = 5e-40
Identities = 96/210 (45%), Positives = 127/210 (59%), Gaps = 18/210 (8%)
Query: 57 GGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCR 116
GGG+ G +P SMS+RAR+A +P+PE LKCPRC+STNTKFCYFNNYSLSQPRHFC+ CR
Sbjct: 12 GGGAVGPAKPMSMSERARLARIPLPEPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACR 71
Query: 117 RYWTRGGALRNVPVGGGFRRNKRSS--KSSNNGNSTKSPASSDRQTGSASSTNSITSNNN 174
RYWTRGGALRNVPVGGG+RR+ + + K ++ S + ++ T + S+T + TS+
Sbjct: 72 RYWTRGGALRNVPVGGGYRRHAKRAKPKPASAAGSASAATTTAGSTPAGSTTTTTTSSTC 131
Query: 175 IHSSADILGLTPQM--SSLRFMTPLHHNFSNPNDFVGGGDLGLNY-GFSYMGGVGDLGSA 231
+A L P M +L + PL DF LG + G + G A
Sbjct: 132 ATPNAPAL---PAMLGGNLSILPPL----LRLADF-DAMSLGSTFSGMAAAAGKPPPVDA 183
Query: 232 LGGNSILSSSGLEQWRMPMSMTHQQHQFPF 261
G S+ +++GLEQWR+ Q FPF
Sbjct: 184 AGCYSVGAATGLEQWRL-----QQMQSFPF 208
>emb|CAA56288.1| Dof3 gene [Zea mays] gi|2130125|pir||S59853 DNA-binding protein
Dof3 - maize (fragment)
Length = 302
Score = 165 bits (418), Expect = 2e-39
Identities = 97/221 (43%), Positives = 129/221 (57%), Gaps = 37/221 (16%)
Query: 57 GGGSTGS-IRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTC 115
GGG G +P SM++RAR+A +P+PE LKCPRC+STNTKFCYFNNYSL+QPRHFC+ C
Sbjct: 3 GGGQVGGPAKPMSMAERARLARIPLPEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCRAC 62
Query: 116 RRYWTRGGALRNVPVGGGFRRNKRSSK------------SSNNGNSTKSPASSDRQTGSA 163
RRYWTRGGALRNVPVGGG+RR+ + +K + NG + PA S + +A
Sbjct: 63 RRYWTRGGALRNVPVGGGYRRHAKRAKPKQQQQHAAAGTGAANGAMQQPPAGSMASSAAA 122
Query: 164 -SSTNSITSNNNIHSSADILGLTPQMSSLRFMTPLHHNFSNPNDFVGGGDLGLNY-GFSY 221
++T ++T+N +L + P + L DF LG ++ G S
Sbjct: 123 CTATTTMTTNALDAGPGGMLPMLPPLVRLA-------------DF-DAMSLGSSFSGISS 168
Query: 222 MGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQQHQFPFL 262
MG G +G+A +S+ GLEQWR+ Q FPFL
Sbjct: 169 MGKPGSIGAACYPHSV---GGLEQWRV-----QQMQSFPFL 201
>ref|NP_850126.1| Dof-type zinc finger domain-containing protein [Arabidopsis
thaliana] gi|55584015|sp|Q9ZV33|DOF22_ARATH Dof zinc
finger protein DOF2.2 (AtDOF2.2)
Length = 340
Score = 163 bits (413), Expect = 7e-39
Identities = 119/334 (35%), Positives = 164/334 (48%), Gaps = 41/334 (12%)
Query: 25 NHHQQPGNGGSVS--QQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMS----DRARMA-N 77
+HHQ NG VS Q+L P + ++ P S++ +RAR+A N
Sbjct: 27 HHHQLQENGSLVSGHHQVLSHHFPQNPNPNHHHVETAAATTVDPSSLNGQAAERARLAKN 86
Query: 78 MPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRN 137
PE ALKCPRC+S NTKFCYFNNY+L+QPRHFCK CRRYWTRGGALRNVPVGGG RRN
Sbjct: 87 SQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
Query: 138 KRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADI-LGLTPQMSSLRFMTP 196
K+ +GNS S +S ++Q+ S + S T+ +N+ + P + +L +
Sbjct: 147 KK----GKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQNLTQLGG 202
Query: 197 LHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQQ 256
+ N + N GG G + + DLG GGN+ G M+
Sbjct: 203 IGLNLAAINGNNGGN------GNTSSSFLNDLGFFHGGNTSGPVMGNNNENNLMTSLGSS 256
Query: 257 HQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMED---- 312
F G LY F V + ++S G R ++Q A VKMED
Sbjct: 257 SHFALFDRTMG----LYNFPNEV--NMGLSSIGATR---------VSQTAQVKMEDNHLG 301
Query: 313 SINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSA 346
+I+R G+ + N SN Q+W + G+S+
Sbjct: 302 NISRPVSGLTSPGNQSN----QYWTGQGLPGSSS 331
>gb|AAC79586.1| putative DOF zinc finger protein [Arabidopsis thaliana]
gi|25352305|pir||B84689 probable DOF zinc finger protein
[imported] - Arabidopsis thaliana
Length = 320
Score = 161 bits (407), Expect = 3e-38
Identities = 117/336 (34%), Positives = 165/336 (48%), Gaps = 65/336 (19%)
Query: 25 NHHQQPGNGGSVS--QQLLQTQTPPPQQSQSQPHGGGSTGSIRPGSMS----DRARMA-N 77
+HHQ NG VS Q+L P + ++ P S++ +RAR+A N
Sbjct: 27 HHHQLQENGSLVSGHHQVLSHHFPQNPNPNHHHVETAAATTVDPSSLNGQAAERARLAKN 86
Query: 78 MPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRN 137
PE ALKCPRC+S NTKFCYFNNY+L+QPRHFCK CRRYWTRGGALRNVPVGGG RRN
Sbjct: 87 SQPPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
Query: 138 KRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMTPL 197
K+ +GNS S +S ++Q+ S + S T+ +N+ + P + +L+ +T L
Sbjct: 147 KK----GKSGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTN--SQFPFLPTLQNLTQL 200
Query: 198 HHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGG---NSILSSSGLEQWRMPMSMTH 254
G +GLN + G G G +G N++++S G T
Sbjct: 201 -------------GGIGLNLA-AINGNNGGNGPVMGNNNENNLMTSLGSSSHFALFDRTM 246
Query: 255 QQHQFPFLANLEGTNSNLYPFEGNVQNHEMITSGGYVRPKVISTSGIMTQLASVKMED-- 312
+ FP N+ ++S G R ++Q A VKMED
Sbjct: 247 GLYNFPNEVNMG------------------LSSIGATR---------VSQTAQVKMEDNH 279
Query: 313 --SINRGFLGINTSNNNSNQGSEQFWNSAVVTGNSA 346
+I+R G+ + N SN Q+W + G+S+
Sbjct: 280 LGNISRPVSGLTSPGNQSN----QYWTGQGLPGSSS 311
>ref|NP_563792.3| Dof-type zinc finger domain-containing protein [Arabidopsis
thaliana] gi|60392196|sp|Q8L9V6|DOF11_ARATH Dof zinc
finger protein DOF1.1 (AtDOF1.1) (OBF binding protein 2)
Length = 331
Score = 156 bits (395), Expect = 8e-37
Identities = 118/345 (34%), Positives = 169/345 (48%), Gaps = 46/345 (13%)
Query: 22 QQQNHHQQPGNGGSVSQQ--LLQTQTPPPQQSQSQPHGGGSTGSIRP----GSMSDRARM 75
Q HQ NG +S +L Q PP Q + + H +T + P GSM++RAR
Sbjct: 8 QHHLQHQLNENGSIISGHGLVLSHQLPPLQANPNPNHHHVATSAGLPSRMGGSMAERARQ 67
Query: 76 ANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFR 135
AN+P LKCPRC+S+NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRNVPVGGG R
Sbjct: 68 ANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCR 127
Query: 136 RNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMT 195
RN + K+ N +S+ S S + S+ + +N+ S + LT Q+ +
Sbjct: 128 RNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTLYNLT-QLGGIGL-- 184
Query: 196 PLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQ 255
N + N G + G S M + DLG G N+ +G + + +
Sbjct: 185 ----NLAATN----GNNQAHQIGSSLM--MSDLGFLHGRNTSTPMTG----NIHENNNNN 230
Query: 256 QHQFPFLAN--------LEGTNSNLYPF--EGNVQNHEMITSGGYVRPKVISTSGI---M 302
++ +A+ L + LY F +GN+ N+ I+ STS + +
Sbjct: 231 NNENNLMASVGSLSPFALFDPTTGLYAFQNDGNIGNNVGISGS--------STSMVDSRV 282
Query: 303 TQLASVKMEDSINRGFLGINTSNNNS--NQGSEQFWNSAVVTGNS 345
Q VKME+ N L S S NQ ++ FW + +G S
Sbjct: 283 YQTPPVKMEEQPNLANLSRPVSGLTSPGNQTNQYFWPGSDFSGPS 327
>gb|AAF75094.1| Strong similarity to zinc finger protein OBP2 from Arabidopsis
thaliana gb|AF155816. EST gb|N65215 comes from this
gene
Length = 339
Score = 156 bits (395), Expect = 8e-37
Identities = 118/345 (34%), Positives = 169/345 (48%), Gaps = 46/345 (13%)
Query: 22 QQQNHHQQPGNGGSVSQQ--LLQTQTPPPQQSQSQPHGGGSTGSIRP----GSMSDRARM 75
Q HQ NG +S +L Q PP Q + + H +T + P GSM++RAR
Sbjct: 16 QHHLQHQLNENGSIISGHGLVLSHQLPPLQANPNPNHHHVATSAGLPSRMGGSMAERARQ 75
Query: 76 ANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFR 135
AN+P LKCPRC+S+NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRNVPVGGG R
Sbjct: 76 ANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCR 135
Query: 136 RNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMT 195
RN + K+ N +S+ S S + S+ + +N+ S + LT Q+ +
Sbjct: 136 RNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTLYNLT-QLGGIGL-- 192
Query: 196 PLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQ 255
N + N G + G S M + DLG G N+ +G + + +
Sbjct: 193 ----NLAATN----GNNQAHQIGSSLM--MSDLGFLHGRNTSTPMTG----NIHENNNNN 238
Query: 256 QHQFPFLAN--------LEGTNSNLYPF--EGNVQNHEMITSGGYVRPKVISTSGI---M 302
++ +A+ L + LY F +GN+ N+ I+ STS + +
Sbjct: 239 NNENNLMASVGSLSPFALFDPTTGLYAFQNDGNIGNNVGISGS--------STSMVDSRV 290
Query: 303 TQLASVKMEDSINRGFLGINTSNNNS--NQGSEQFWNSAVVTGNS 345
Q VKME+ N L S S NQ ++ FW + +G S
Sbjct: 291 YQTPPVKMEEQPNLANLSRPVSGLTSPGNQTNQYFWPGSDFSGPS 335
>gb|AAM65740.1| zinc finger protein OBP2 [Arabidopsis thaliana]
Length = 331
Score = 154 bits (389), Expect = 4e-36
Identities = 117/345 (33%), Positives = 169/345 (48%), Gaps = 46/345 (13%)
Query: 22 QQQNHHQQPGNGGSVSQQ--LLQTQTPPPQQSQSQPHGGGSTGSIRP----GSMSDRARM 75
Q HQ NG +S +L Q PP Q + + H +T + P GSM++RAR
Sbjct: 8 QHHLQHQLNENGSIISGHGLVLSHQLPPLQANPNPNHHHVATSAGLPSRMGGSMAERARQ 67
Query: 76 ANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFR 135
AN+P LKCPRC+S+NTKFCY+NNY+L+QPR+FCK CRRYWT+GGALRNVPVGGG R
Sbjct: 68 ANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRYFCKGCRRYWTQGGALRNVPVGGGCR 127
Query: 136 RNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTPQMSSLRFMT 195
RN + K+ N +S+ S S + S+ + +N+ S + LT Q+ +
Sbjct: 128 RNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTLYNLT-QLGGIGL-- 184
Query: 196 PLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQWRMPMSMTHQ 255
N + N G + G S M + DLG G N+ +G + + +
Sbjct: 185 ----NLAATN----GNNQAHQIGSSLM--MSDLGFLHGRNTSTPMTG----NIHENNNNN 230
Query: 256 QHQFPFLAN--------LEGTNSNLYPF--EGNVQNHEMITSGGYVRPKVISTSGI---M 302
++ +A+ L + LY F +GN+ N+ I+ STS + +
Sbjct: 231 NNENNLMASVGSLSPFALFDPTTGLYAFQNDGNIGNNVGISGS--------STSMVDSRV 282
Query: 303 TQLASVKMEDSINRGFLGINTSNNNS--NQGSEQFWNSAVVTGNS 345
Q VKME+ N L S S NQ ++ FW + +G S
Sbjct: 283 YQTPPVKMEEQPNLANLSRPVSGLTSPGNQTNQYFWPGSDFSGPS 327
>gb|AAM13350.1| strong similarity to zinc finger protein OBP2 [Arabidopsis
thaliana] gi|30680237|ref|NP_850938.1| Dof-type zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|17065278|gb|AAL32793.1| Strong similarity to zinc
finger protein OBP2 [Arabidopsis thaliana]
Length = 275
Score = 147 bits (370), Expect = 7e-34
Identities = 104/294 (35%), Positives = 149/294 (50%), Gaps = 40/294 (13%)
Query: 67 GSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALR 126
GSM++RAR AN+P LKCPRC+S+NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALR
Sbjct: 3 GSMAERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALR 62
Query: 127 NVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNNIHSSADILGLTP 186
NVPVGGG RRN + K+ N +S+ S S + S+ + +N+ S + LT
Sbjct: 63 NVPVGGGCRRNNKKGKNGNLKSSSSSSKQSSSVNAQSPSSGQLRTNHQFPFSPTLYNLT- 121
Query: 187 QMSSLRFMTPLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGGNSILSSSGLEQW 246
Q+ + N + N G + G S M + DLG G N+ +G
Sbjct: 122 QLGGIGL------NLAATN----GNNQAHQIGSSLM--MSDLGFLHGRNTSTPMTG---- 165
Query: 247 RMPMSMTHQQHQFPFLAN--------LEGTNSNLYPF--EGNVQNHEMITSGGYVRPKVI 296
+ + + ++ +A+ L + LY F +GN+ N+ I+
Sbjct: 166 NIHENNNNNNNENNLMASVGSLSPFALFDPTTGLYAFQNDGNIGNNVGISGS-------- 217
Query: 297 STSGI---MTQLASVKMEDSINRGFLGINTSNNNS--NQGSEQFWNSAVVTGNS 345
STS + + Q VKME+ N L S S NQ ++ FW + +G S
Sbjct: 218 STSMVDSRVYQTPPVKMEEQPNLANLSRPVSGLTSPGNQTNQYFWPGSDFSGPS 271
>emb|CAA66601.1| Zn finger protein [Nicotiana tabacum] gi|7489124|pir||T02370 finger
protein BBF1.1 - common tobacco (fragment)
Length = 234
Score = 143 bits (360), Expect = 9e-33
Identities = 82/187 (43%), Positives = 105/187 (55%), Gaps = 10/187 (5%)
Query: 55 PHGGGSTGSIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 114
P G G ++ P P E A+ CPRC STNTKFCY+NNYSLSQPR+FCKT
Sbjct: 14 PQGIGLAKAVEPSKPVPVTERKPRPQKEQAINCPRCNSTNTKFCYYNNYSLSQPRYFCKT 73
Query: 115 CRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTGSASSTNSITSNNN 174
CRRYWT GG+LRNVPVGGG R+NKRS+ SSNN +S+ S +S + T+S T N
Sbjct: 74 CRRYWTDGGSLRNVPVGGGSRKNKRSNSSSNNSSSSTS-SSYKKIPDLTIPTSSSTQNPK 132
Query: 175 IHSSADILGLTPQMSSLRFMTPLHHNFSNPNDFVGGGDLGLNYGFSYMGGVGDLGSALGG 234
I + L LT F NFSN ++F+ + N S+M + +
Sbjct: 133 IINEPHDLNLT-------FNPSTTSNFSNISEFMALPLMNPNSTTSFMSSI--MPQISDS 183
Query: 235 NSILSSS 241
N+I+ SS
Sbjct: 184 NNIMYSS 190
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 679,041,219
Number of Sequences: 2540612
Number of extensions: 30449003
Number of successful extensions: 217800
Number of sequences better than 10.0: 824
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 588
Number of HSP's that attempted gapping in prelim test: 195475
Number of HSP's gapped (non-prelim): 11008
length of query: 367
length of database: 863,360,394
effective HSP length: 129
effective length of query: 238
effective length of database: 535,621,446
effective search space: 127477904148
effective search space used: 127477904148
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)
Medicago: description of AC126019.13