BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126018.10 + phase: 0
(72 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA84410.1| ATP-dependent protease subunit [Arabidopsis thal... 105 2e-22
emb|CAB88752.1| ATP-dependent protease proteolytic subunit [Spin... 104 5e-22
gb|AAP29415.2| ATP-dependent Clp protease proteolytic subunit [A... 103 1e-21
dbj|BAB33221.1| ATP-dependent protease subunit [Lotus corniculat... 103 2e-21
emb|CAA77422.1| ATP-dependent protease proteolytic subuni [Nicot... 102 3e-21
emb|CAF28619.1| ATP-dependent protease proteolytic subunit [Nymp... 102 3e-21
dbj|BAB84241.1| ATP-dependent protease [Psilotum nudum] gi|18860... 102 3e-21
pir||A05201 endopeptidase Clp (EC 3.4.21.92) chain P [similarity... 102 3e-21
prf||1211235BD ORF 73 102 3e-21
emb|CAA28109.1| unnamed protein product [Marchantia polymorpha] ... 102 3e-21
gb|AAV74350.1| ClpP [Acorus gramineus] 102 3e-21
ref|YP_209504.1| ATP-dependent protease [Huperzia lucidula] gi|5... 102 3e-21
dbj|BAC55470.1| ATP-dependent protease proteolytic subunit [Anth... 102 3e-21
ref|YP_086990.1| ATP-dependent protease; catalytic subunit [Pana... 100 7e-21
emb|CAD28745.1| ATP-dependent protease proteolytic subunit [Caly... 100 1e-20
dbj|BAC85025.1| ATP-dependent protease proteolytic subunit [Phys... 100 1e-20
emb|CAD45131.1| ATP-dependent protease proteolytic subunit [Ambo... 99 4e-20
emb|CAC88069.1| ATP-dependent protease; catalytic subunit [Atrop... 98 5e-20
emb|CAJ00784.1| ATP-dependent Clp protease proteolytic subunit [... 96 2e-19
gb|AAA65858.1| protease [Epifagus virginiana] gi|11466963|ref|NP... 96 2e-19
>dbj|BAA84410.1| ATP-dependent protease subunit [Arabidopsis thaliana]
gi|5360576|dbj|BAA82063.1| pClpP [Arabidopsis thaliana]
gi|7525058|ref|NP_051083.1| ATP-dependent Clp protease
proteolytic subunit [Arabidopsis thaliana]
gi|6685310|sp|P56772|CLPP_ARATH ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 196
Score = 105 bits (263), Expect = 2e-22
Identities = 51/71 (71%), Positives = 58/71 (80%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+TIT +Y QRTGK W I DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+AHGIVD VA
Sbjct: 184 AQAHGIVDLVA 194
>emb|CAB88752.1| ATP-dependent protease proteolytic subunit [Spinacia oleracea]
gi|11497551|ref|NP_054959.1| ATP-dependent Clp protease
proteolytic subunit [Spinacia oleracea]
gi|18203258|sp|Q9M3K5|CLPP_SPIOL ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 196
Score = 104 bits (260), Expect = 5e-22
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+T+T +Y QRTGK W + DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAQTGEFLLEAEELLKLRETLTKVYGQRTGKPLWVVSEDMERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+AHGI+D VA
Sbjct: 184 AQAHGIIDLVA 194
>gb|AAP29415.2| ATP-dependent Clp protease proteolytic subunit [Adiantum
capillus-veneris] gi|49574608|ref|NP_848084.2|
ATP-dependent Clp protease proteolytic subunit [Adiantum
capillus-veneris]
Length = 200
Score = 103 bits (257), Expect = 1e-21
Identities = 47/71 (66%), Positives = 59/71 (82%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S Y+GQ GEC++EAEE+LK+R IT +YAQRTGK W I DMERD+F+SAEE
Sbjct: 124 MIHQPASSYYDGQAGECVMEAEEVLKLRDCITKVYAQRTGKPLWLISEDMERDVFLSAEE 183
Query: 61 AEAHGIVDTVA 71
A+ +G+VD VA
Sbjct: 184 AQDYGVVDLVA 194
>dbj|BAB33221.1| ATP-dependent protease subunit [Lotus corniculatus var. japonicus]
gi|13518463|ref|NP_084822.1| ATP-dependent Clp protease
proteolytic subunit [Lotus corniculatus var. japonicus]
gi|18202721|sp|Q9BBQ9|CLPP_LOTJA ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 196
Score = 103 bits (256), Expect = 2e-21
Identities = 49/71 (69%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+TIT +Y QRTGK W + DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWLVSEDMERDVFMSAAE 183
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 184 AQAYGIVDLVA 194
>emb|CAA77422.1| ATP-dependent protease proteolytic subuni [Nicotiana tabacum]
gi|11465983|ref|NP_054525.1| ATP-dependent Clp protease
proteolytic subunit [Nicotiana tabacum]
gi|1143166|gb|AAA84867.1| ClpP protease [Nicotiana
tabacum] gi|116527|sp|P12210|CLPP_TOBAC ATP-dependent
Clp protease proteolytic subunit (Endopeptidase Clp)
Length = 196
Score = 102 bits (254), Expect = 3e-21
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+T+T +Y QRTGK W + DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 184 AQAYGIVDLVA 194
>emb|CAF28619.1| ATP-dependent protease proteolytic subunit [Nymphaea alba]
gi|50346808|ref|YP_053179.1| ATP-dependent protease
proteolytic subunit [Nymphaea alba]
Length = 202
Score = 102 bits (254), Expect = 3e-21
Identities = 48/71 (67%), Positives = 57/71 (79%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+ +T +Y QRTGK W + DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+AHGIVD VA
Sbjct: 184 AQAHGIVDLVA 194
>dbj|BAB84241.1| ATP-dependent protease [Psilotum nudum]
gi|18860336|ref|NP_569653.1| ATP-dependent Clp protease
proteolytic subunit [Psilotum nudum]
gi|22653694|sp|Q8WHZ7|CLPP_PSINU ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 198
Score = 102 bits (254), Expect = 3e-21
Identities = 47/71 (66%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S Y+GQ GEC++EAEE+LK+R IT +YAQRT K W I DMERD+FMSA+E
Sbjct: 124 MIHQPASSYYDGQAGECIMEAEEILKLRDCITRVYAQRTEKPLWVISEDMERDIFMSAKE 183
Query: 61 AEAHGIVDTVA 71
A A+GIVD +A
Sbjct: 184 ARAYGIVDLIA 194
>pir||A05201 endopeptidase Clp (EC 3.4.21.92) chain P [similarity] - common
tobacco chloroplast (fragments)
Length = 147
Score = 102 bits (254), Expect = 3e-21
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+T+T +Y QRTGK W + DMERD+FMSA E
Sbjct: 75 MIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATE 134
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 135 AQAYGIVDLVA 145
>prf||1211235BD ORF 73
Length = 73
Score = 102 bits (254), Expect = 3e-21
Identities = 48/71 (67%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+T+T +Y QRTGK W + DMERD+FMSA E
Sbjct: 1 MIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATE 60
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 61 AQAYGIVDLVA 71
>emb|CAA28109.1| unnamed protein product [Marchantia polymorpha]
gi|81339|pir||A05056 endopeptidase Clp (EC 3.4.21.92)
chain P [similarity] - liverwort (Marchantia polymorpha)
chloroplast gi|11466727|ref|NP_039323.1| ATP-dependent
Clp protease proteolytic subunit [Marchantia polymorpha]
gi|116525|sp|P12208|CLPP_MARPO ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 203
Score = 102 bits (253), Expect = 3e-21
Identities = 47/71 (66%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S Y+GQ GEC++EAEE+LK+R IT +Y QRTGK W I DMERD+FMSA+E
Sbjct: 124 MIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMSAKE 183
Query: 61 AEAHGIVDTVA 71
A+ +GIVD VA
Sbjct: 184 AKLYGIVDLVA 194
>gb|AAV74350.1| ClpP [Acorus gramineus]
Length = 202
Score = 102 bits (253), Expect = 3e-21
Identities = 47/70 (67%), Positives = 57/70 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+T+T +Y QRTGK W + DMERD+F+SA E
Sbjct: 124 MIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLSATE 183
Query: 61 AEAHGIVDTV 70
A+AHGIVD V
Sbjct: 184 AQAHGIVDLV 193
>ref|YP_209504.1| ATP-dependent protease [Huperzia lucidula]
gi|50659978|gb|AAT80700.1| ATP-dependent protease
[Huperzia lucidula]
Length = 209
Score = 102 bits (253), Expect = 3e-21
Identities = 46/71 (64%), Positives = 58/71 (80%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YEGQVGEC++EAEE+LK+R IT +YAQRTGK W + D ERD+F SAEE
Sbjct: 124 MIHQPASSYYEGQVGECIMEAEEVLKIRDCITKVYAQRTGKPLWVVSEDTERDVFTSAEE 183
Query: 61 AEAHGIVDTVA 71
A+ +G++D VA
Sbjct: 184 AKVYGVIDPVA 194
>dbj|BAC55470.1| ATP-dependent protease proteolytic subunit [Anthoceros formosae]
gi|28202196|ref|NP_777437.1| ATP-dependent Clp protease
proteolytic subunit [Anthoceros formosae]
gi|27807898|dbj|BAC55373.1| ATP-dependent protease
proteolytic subunit exon3 [Anthoceros formosae]
gi|41688497|sp|Q85BZ1|CLPP_ANTFO ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 204
Score = 102 bits (253), Expect = 3e-21
Identities = 47/71 (66%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S Y+GQ GEC++EAEE+LK+R IT +Y QRTGK W I DMERD+FMSA+E
Sbjct: 124 MIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMSAKE 183
Query: 61 AEAHGIVDTVA 71
A+ +GIVD VA
Sbjct: 184 AQIYGIVDFVA 194
>ref|YP_086990.1| ATP-dependent protease; catalytic subunit [Panax ginseng]
gi|51235337|gb|AAT98533.1| ATP-dependent protease;
catalytic subunit [Panax ginseng]
Length = 196
Score = 100 bits (250), Expect = 7e-21
Identities = 47/71 (66%), Positives = 58/71 (81%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE Q GE +LEAEELLK+R+TIT +Y Q+TGK W + D+ERD+FMSA E
Sbjct: 124 MIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYVQKTGKPFWVVSEDLERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 184 AQAYGIVDLVA 194
>emb|CAD28745.1| ATP-dependent protease proteolytic subunit [Calycanthus floridus
var. glaucus] gi|32480867|ref|NP_862778.1| ATP-dependent
Clp protease proteolytic subunit [Calycanthus floridus
var. glaucus]
Length = 202
Score = 100 bits (249), Expect = 1e-20
Identities = 47/71 (66%), Positives = 56/71 (78%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE GE +LEAEELLK+R+T+T +Y QRTG W + DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+AHGIVD VA
Sbjct: 184 AQAHGIVDLVA 194
>dbj|BAC85025.1| ATP-dependent protease proteolytic subunit [Physcomitrella patens
subsp. patens] gi|34501388|ref|NP_904176.1|
ATP-dependent Clp protease proteolytic subunit
[Physcomitrella patens subsp. patens]
Length = 199
Score = 100 bits (248), Expect = 1e-20
Identities = 46/71 (64%), Positives = 57/71 (79%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S Y+GQ GEC++EAEE+LK+R IT +Y QR GK W I DMERD+FMSA+E
Sbjct: 125 MIHQPASSYYDGQAGECIMEAEEVLKLRDYITRVYVQRIGKPLWVISEDMERDVFMSAQE 184
Query: 61 AEAHGIVDTVA 71
A+ +GIVD VA
Sbjct: 185 AKTYGIVDLVA 195
>emb|CAD45131.1| ATP-dependent protease proteolytic subunit [Amborella trichopoda]
gi|34500938|ref|NP_904123.1| ATP-dependent protease
proteolytic subunit [Amborella trichopoda]
Length = 202
Score = 98.6 bits (244), Expect = 4e-20
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S YE GE +LEA ELLK+R+TIT++Y QRTG W + DMERD+FMSA E
Sbjct: 124 MIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNPLWVVSEDMERDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+AHGIVD +A
Sbjct: 184 AQAHGIVDLIA 194
>emb|CAC88069.1| ATP-dependent protease; catalytic subunit [Atropa belladonna]
gi|28261742|ref|NP_783256.1| ATP-dependent Clp protease
proteolytic subunit [Atropa belladonna]
Length = 196
Score = 98.2 bits (243), Expect = 5e-20
Identities = 45/71 (63%), Positives = 57/71 (79%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
M+HQPA+ YE Q GE +LEAEELLK+R+T+T +Y QRTGK W + DME+D+FMSA E
Sbjct: 124 MMHQPASGYYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMEKDVFMSATE 183
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 184 AQAYGIVDLVA 194
>emb|CAJ00784.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 95.9 bits (237), Expect = 2e-19
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+S +G+ GE +LE+ ELL +R+TIT +Y QRTGK W I DMERD+FMSA E
Sbjct: 124 MIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRTGKPLWVIPEDMERDVFMSAPE 183
Query: 61 AEAHGIVDTVA 71
A+AHGIVD VA
Sbjct: 184 AQAHGIVDLVA 194
>gb|AAA65858.1| protease [Epifagus virginiana] gi|11466963|ref|NP_054384.1|
ATP-dependent Clp protease proteolytic subunit [Epifagus
virginiana] gi|7435699|pir||S78388 endopeptidase Clp (EC
3.4.21.92) chain P [similarity] - beechdrops plastid
gi|231812|sp|P30063|CLPP_EPIVI ATP-dependent Clp
protease proteolytic subunit (Endopeptidase Clp)
Length = 196
Score = 95.9 bits (237), Expect = 2e-19
Identities = 45/71 (63%), Positives = 57/71 (79%)
Query: 1 MIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSAEE 60
MIHQPA+ + Q GE +LEAEELLK+R+T+T +Y QRTGK W I DMERD+FMSA++
Sbjct: 124 MIHQPASYFFGAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVISEDMERDVFMSAKD 183
Query: 61 AEAHGIVDTVA 71
A+A+GIVD VA
Sbjct: 184 AQAYGIVDLVA 194
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.129 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,998,793
Number of Sequences: 2540612
Number of extensions: 3159566
Number of successful extensions: 7611
Number of sequences better than 10.0: 504
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 7119
Number of HSP's gapped (non-prelim): 505
length of query: 72
length of database: 863,360,394
effective HSP length: 48
effective length of query: 24
effective length of database: 741,411,018
effective search space: 17793864432
effective search space used: 17793864432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC126018.10