BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125481.7 + phase: 0 /pseudo
(489 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176623.2| hypothetical protein [Arabidopsis thaliana] 279 1e-73
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 269 2e-70
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 269 2e-70
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 261 4e-68
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 252 2e-65
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 252 2e-65
gb|AAT81738.1| hypothetical protein [Oryza sativa (japonica cult... 248 2e-64
gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultiva... 246 2e-63
gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-... 243 8e-63
gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultiva... 239 2e-61
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 229 1e-58
gb|AAD25621.1| Hypothetical protein [Arabidopsis thaliana] gi|... 219 2e-55
ref|NP_175845.1| hypothetical protein [Arabidopsis thaliana] 217 6e-55
ref|XP_463203.1| putative helicase [Oryza sativa (japonica culti... 209 1e-52
ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana] gi|... 182 3e-44
emb|CAB77939.1| hypothetical protein [Arabidopsis thaliana] gi|4... 171 6e-41
emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa (japonica cultivar... 166 1e-39
gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353... 162 3e-38
ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana] 162 3e-38
dbj|BAB11364.1| helicase [Arabidopsis thaliana] 153 1e-35
>ref|NP_176623.2| hypothetical protein [Arabidopsis thaliana]
Length = 1231
Score = 279 bits (714), Expect = 1e-73
Identities = 154/362 (42%), Positives = 202/362 (55%), Gaps = 64/362 (17%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD YTMIES RLRYI+ NQ R + A + G D N G+++ + PSF GG Y
Sbjct: 288 VDAYTMIESNRLRYIKNNQPQFRSSNKESIQNASNSGNNDLENQGKEVKIPPSFTGGPRY 347
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVFKMKLD 137
M NN DAM+ICK +G+P LF+T CN W EI F KERNLK+ DRPDI+CR+FKMKLD
Sbjct: 348 MTNNYLDAMAICKHFGFPSLFITFTCNPKWPEIVRFCKERNLKSEDRPDIICRIFKMKLD 407
Query: 138 KLMDD--------------------FEKE--------------------ECLAKLMQRHV 157
LM D F+K E K++ +
Sbjct: 408 NLMHDLTIKHLLGKTVSDMCMYTIEFQKRGLPHAHILLFMHPTSKLSTAEDTDKVITAEI 467
Query: 158 PCGGARP-----FSPCMDRGRC---------------TKYYRKNYKGTTTID-EGYPRYK 196
P +P CM G C KY+ K+Y TT +D +G+P Y+
Sbjct: 468 PDKKKKPELYAVVKDCMIHGPCGVGHPNSPCMENGKCKKYFPKSYSDTTKVDNDGFPVYR 527
Query: 197 RRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKA 256
RRD GI+V+K DNRYV+PYN L +RY H+NVE CN+S SIKYLFKYV+K D+
Sbjct: 528 RRDTGIYVEKNGFQCDNRYVIPYNEKLSLRYQAHINVEWCNQSGSIKYLFKYVHKGHDR- 586
Query: 257 LMQLSVDGDNRDKS-KPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHN 315
+ ++V+ +++D + K DE+K Y+DCRYVS CEA+WRIF F IH++ V+KL FH
Sbjct: 587 -VTVTVEPNDQDTAKKEKDEVKDYFDCRYVSACEAMWRIFKFPIHYRTTPVVKLFFHEEG 645
Query: 316 EQ 317
+Q
Sbjct: 646 KQ 647
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 269 bits (687), Expect = 2e-70
Identities = 147/370 (39%), Positives = 198/370 (52%), Gaps = 70/370 (18%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD +TMIES RLR+I+KNQ +R + +A D G+ D SN G+ +++ PSF GG Y
Sbjct: 630 VDAFTMIESNRLRFIKKNQTKLRSTNKQAVQDASDAGDNDLSNKGKSVIIPPSFTGGPAY 689
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVF----- 132
M N DAM CK +G+PDLF+T CN+ W +I F+KER L A D+PDI+CR++
Sbjct: 690 MQQNYLDAMGTCKHFGFPDLFITFTCNSKWPKITRFVKERKLNAEDKPDIICRIYKMKLE 749
Query: 133 -------------KMKLDKLMDDFEK---------------------------------- 145
K KL +F+K
Sbjct: 750 NLMDDLTKNHIFGKTKLATYTIEFQKRGLPHAHIIVWMDPRYKFPIADHVDKIIFAEIPD 809
Query: 146 EECLAKLMQR------HVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRYKRR 198
+E KL Q H PC P SPCM+ G+C+KYY KN+ T +D EGYP Y+RR
Sbjct: 810 KENDPKLYQAVSECMIHGPCRLVNPNSPCMENGKCSKYYPKNHVENTFLDNEGYPIYRRR 869
Query: 199 DFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKALM 258
D G + K + DNRYVVPYN LL +Y H+NVE CN+S S+KYLFKYVNK PD+ +
Sbjct: 870 DTGRFIKKNKYPCDNRYVVPYNDFLLRKYRAHINVEWCNQSVSVKYLFKYVNKGPDRVTV 929
Query: 259 QLSVD-----------GDNRDKSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVL 307
L G+ + + ++++ Y+DCRYVS CEA+WRI + IH++ V
Sbjct: 930 SLEPHRKEVVSEENNVGETNNDPQEQNQVEDYFDCRYVSACEAMWRIKGYPIHYRQTLVT 989
Query: 308 KLLFHLHNEQ 317
KL FH +Q
Sbjct: 990 KLTFHEKGKQ 999
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 269 bits (687), Expect = 2e-70
Identities = 147/370 (39%), Positives = 198/370 (52%), Gaps = 70/370 (18%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD +TMIES RLR+I+KNQ +R + +A D G+ D SN G+ +++ PSF GG Y
Sbjct: 415 VDAFTMIESNRLRFIKKNQTKLRSTNKQAVQDASDAGDNDLSNKGKSVIIPPSFTGGPAY 474
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVF----- 132
M N DAM CK +G+PDLF+T CN+ W +I F+KER L A D+PDI+CR++
Sbjct: 475 MQQNYLDAMGTCKHFGFPDLFITFTCNSKWPKITRFVKERKLNAEDKPDIICRIYKMKLE 534
Query: 133 -------------KMKLDKLMDDFEK---------------------------------- 145
K KL +F+K
Sbjct: 535 NLMDDLTKNHIFGKTKLATYTIEFQKRGLPHAHIIVWMDPRYKFPIADHVDKIIFAEIPD 594
Query: 146 EECLAKLMQR------HVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRYKRR 198
+E KL Q H PC P SPCM+ G+C+KYY KN+ T +D EGYP Y+RR
Sbjct: 595 KENDPKLYQAVSECMIHGPCRLVNPNSPCMENGKCSKYYPKNHVENTFLDNEGYPIYRRR 654
Query: 199 DFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKALM 258
D G + K + DNRYVVPYN LL +Y H+NVE CN+S S+KYLFKYVNK PD+ +
Sbjct: 655 DTGRFIKKNKYPCDNRYVVPYNDFLLRKYRAHINVEWCNQSVSVKYLFKYVNKGPDRVTV 714
Query: 259 QLSVD-----------GDNRDKSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVL 307
L G+ + + ++++ Y+DCRYVS CEA+WRI + IH++ V
Sbjct: 715 SLEPHRKEVVSEENNVGETNNDPQEQNQVEDYFDCRYVSACEAMWRIKGYPIHYRQTLVT 774
Query: 308 KLLFHLHNEQ 317
KL FH +Q
Sbjct: 775 KLTFHEKGKQ 784
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 261 bits (667), Expect = 4e-68
Identities = 139/333 (41%), Positives = 192/333 (56%), Gaps = 56/333 (16%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD TMIE++R+ Y++ NQKT+R + + + + G D+S G++ VL SF GG Y
Sbjct: 257 VDGLTMIEAERISYLQFNQKTLRAEKYSSVEASAEKGNNDSSMCGKRYVLPSSFVGGARY 316
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVFKMKLD 137
M DAM++C+ YGYP LF+T CN W EI +L R L A DR DIV RV+KMKLD
Sbjct: 317 MQQKYMDAMALCQHYGYPHLFITFTCNPKWPEITRYLNARGLSAEDRADIVTRVYKMKLD 376
Query: 138 KLMDDF----------------------EKEECL-------------------------- 149
L+ D EKE +
Sbjct: 377 HLIWDIKNNNVFGPSRAGLPHAHILLFLEKEAKIPTTADVDKFIWAEIPDKYTHPILHEV 436
Query: 150 AKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRYKRRDFGIHVDKQR 208
K M H PCG A SPCM++G+C+K + K++ +T I+ +G+P YKRRD G V+K
Sbjct: 437 VKEMMIHGPCGLANKNSPCMEKGKCSKKFPKDFTSSTHINKDGFPIYKRRDDGRFVEKNG 496
Query: 209 VLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKALMQLSVDGDNRD 268
+LLDNR+V+PYNP LL++Y H+NVE ++S +KYLFKY+NK DK ++ ++
Sbjct: 497 ILLDNRFVIPYNPTLLLKYQAHINVEWVSQSKIVKYLFKYINKGNDKVTARI------KE 550
Query: 269 KSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHH 301
+ P +EIK++YDCRY+SPCEA WRIF FD+HH
Sbjct: 551 GTGP-NEIKRWYDCRYISPCEAAWRIFGFDLHH 582
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 252 bits (644), Expect = 2e-65
Identities = 150/393 (38%), Positives = 200/393 (50%), Gaps = 76/393 (19%)
Query: 1 MQDRVVDYGNVVNSRRSV-----DCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGE 55
+Q+R V+ ++ S+R D YT IES RL YI+ NQ +RC + EA G
Sbjct: 628 IQEREVECQTLLRSKRLFQQCLCDAYTTIESNRLNYIKFNQSKLRCENYTSVKEAAAAGA 687
Query: 56 TDASNVGQKIVLQPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLK 115
T G ++++ SF GG YM + DAM+ICK YG+PDLF+T CN W EI +
Sbjct: 688 TTMEEEGNQLLIPASFTGGPRYMVQSYYDAMAICKHYGFPDLFITFTCNPKWPEITRYYD 747
Query: 116 ERNLKASDRPDIVCRVFKMKL--------------------------------------- 136
+R L DRP+I+ R+FK+KL
Sbjct: 748 KRGLNPEDRPNIIARIFKIKLDSLMNDLTVKKMLGKTVASMYTVEFQKRGLPHAHILLFM 807
Query: 137 ------------DKLMD----DFEKEECLAKLMQR---HVPCGGARPFSPCMDRGRCTKY 177
DKL+ D EKE L ++++ H PCG A SPCM G C+K
Sbjct: 808 HAKSKLPTADDIDKLISAEIPDKEKEPDLYEVIKNSMIHGPCGSANVNSPCMVDGECSKL 867
Query: 178 YRKNYKGTTTI-DEGYPRYKRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECC 236
Y K ++ T I +GYP Y+RR +V+K + DNRYVVPYN L +RY H+NVE C
Sbjct: 868 YPKKHQDITKIGSDGYPIYRRRKTDDYVEKGGIKCDNRYVVPYNKKLSLRYNAHINVEWC 927
Query: 237 NKSNSIKYLFKYVNKVPDKALM-----QLSVDGDNR-------DKSKPVDEIKQYYDCRY 284
N++ SIKYLFKY+NK PDK + Q + GD+ K +EIK ++DCRY
Sbjct: 928 NQNGSIKYLFKYINKGPDKVVFIVEPTQQTTAGDSETPQQEQGSAEKKKNEIKDWFDCRY 987
Query: 285 VSPCEAVWRIFAFDIHHK*PHVLKLLFHLHNEQ 317
VS EAVWRIF + I H V KL FH+ +Q
Sbjct: 988 VSASEAVWRIFKYPIQHISTPVQKLSFHVEGKQ 1020
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 252 bits (643), Expect = 2e-65
Identities = 143/372 (38%), Positives = 194/372 (51%), Gaps = 75/372 (20%)
Query: 19 DCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHYM 78
D YT IES RL YI+ NQ +RC N + E+ G T S G ++++ SF GG YM
Sbjct: 309 DAYTTIESNRLAYIKFNQSKLRCENFNSIKESASSGSTTMSEEGNQVLIPSSFTGGPRYM 368
Query: 79 FNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVFKMK--- 135
DAM+ICK +G+PDLF+T CN W EI + ++R L A DRPDIV R+FK+K
Sbjct: 369 LQTYYDAMAICKHFGFPDLFITFTCNPKWPEITRYCEKRGLTADDRPDIVARIFKIKLDS 428
Query: 136 ------------------------------------------------LDKLMD----DF 143
+DK++ +
Sbjct: 429 LMKDLTERHLLGKTVASMYTVEFQKRGLPHAHILLFMAANSKLPTADDIDKIISAEIPNK 488
Query: 144 EKEECLAKLMQR---HVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRYKRRD 199
+KE L ++++ H PCG A SPCM G+C+K Y K ++ T + +GYP Y+RR
Sbjct: 489 DKEPELYEVIKNSMMHGPCGSANTSSPCMVDGQCSKLYPKKHQEITKVGADGYPIYRRRL 548
Query: 200 FGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKALMQ 259
+++K V DNRYVVPYN L +RY H+NVE CN++ SIKYLFKY+NK PD+ +
Sbjct: 549 TDDYIEKGGVKCDNRYVVPYNKKLSLRYQAHINVEWCNQNGSIKYLFKYINKGPDRVVFI 608
Query: 260 LS--------------VDGDNRDKSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PH 305
+ V+ D +K K DEIK ++DCRYVS EA+WRIF F I H+
Sbjct: 609 VEPIKEATSSDTTAPVVESDTTEKKK--DEIKDWFDCRYVSASEAIWRIFKFPIQHRSTP 666
Query: 306 VLKLLFHLHNEQ 317
V KL FH +Q
Sbjct: 667 VQKLSFHDKGKQ 678
>gb|AAT81738.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 1500
Score = 248 bits (634), Expect = 2e-64
Identities = 131/322 (40%), Positives = 195/322 (59%), Gaps = 17/322 (5%)
Query: 8 YGNVVNSRRSVDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVL 67
YG + + + VD ++ IE+ RL++ ++K +R ++G+ +A+D G TD ++G++++L
Sbjct: 222 YGRL-SDQIDVDIFSTIEANRLQFFIDHRKELRGESVDGIVDAIDKGVTDGDSIGKRVIL 280
Query: 68 QPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLK-ERNLKASDRPD 126
SF GGR YM N QDAM+IC YG PDLFVT CN+ W++I + ++ E + SDR D
Sbjct: 281 PASFIGGRRYMVMNYQDAMAICHVYGSPDLFVTYTCNSKWQDIAEAIRFEPGQQPSDRAD 340
Query: 127 IVCRVFKMKLDKLMDDFEKEECLAKLM---------QRHVPCGGARPFSPCMDRGRCTKY 177
I+ RVF MK+++ + D + K++ H PCG A PCM +C+K
Sbjct: 341 IIVRVFNMKVNEFITDIREGRTFGKVLAGYELVSEFMMHGPCGDANKSCPCMKNDKCSKN 400
Query: 178 YRKNYKGTTTIDE-GYPRYKRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECC 236
Y K+++ T IDE + Y++R+ G + K + LDNR VVPYN LL +Y H+NVE C
Sbjct: 401 YPKDFQDETIIDEAAFTIYRQRNDGRCIIKNGIPLDNRSVVPYNMKLLKKYEAHINVEWC 460
Query: 237 NKSNSIKYLFKYVNKVPDKALMQLSVDGDNRDKS-----KPVDEIKQYYDCRYVSPCEAV 291
NKSN IKYLFKY+ K D+A + + S P DEI +Y D R++S CEA+
Sbjct: 461 NKSNLIKYLFKYITKGQDRAKIYFETTAKTTNASPNHDLAPRDEILEYMDARFLSTCEAL 520
Query: 292 WRIFAFDIHHK*PHVLKLLFHL 313
R+F FDIH++ P V +L+ HL
Sbjct: 521 HRLFEFDIHYRVPLVERLVVHL 542
>gb|AAV44035.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1634
Score = 246 bits (627), Expect = 2e-63
Identities = 146/361 (40%), Positives = 191/361 (52%), Gaps = 71/361 (19%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD I RL +IRK+Q +R + GL +A++ G+T A VG++I+L SF GG Y
Sbjct: 550 VDALACIIQYRLDWIRKHQGNLRTELYAGLQDAIERGDTRADQVGKRILLPSSFTGGPRY 609
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNL-KASDRPDIVCR------ 130
N QDAM+IC+ GYPDLFVT CN W EIQ+ L E + K SDRPDIV R
Sbjct: 610 KAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNMLDEIGVQKPSDRPDIVDRVFHIKL 669
Query: 131 ------------------------------------VFKMKLDKLMD------------- 141
+F K DK D
Sbjct: 670 RELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCPDASEIDRIISAEIP 729
Query: 142 ----DFEKEECLAKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTIDE-GYPRYK 196
D E E + M H PCG A+ SPCM +C + + K + TT+DE G+P Y+
Sbjct: 730 DKEEDREGFEAVENFMM-HGPCGEAKSNSPCMIENKCIRNFPKKFHSETTVDEDGFPTYR 788
Query: 197 RRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKA 256
RRD G +++K V LDNRYVVPYN LL++Y H+NVE CN+S SIKYLFKY++K D+A
Sbjct: 789 RRDNGRYIEKGNVKLDNRYVVPYNRDLLVKYQAHINVERCNRSKSIKYLFKYMHKGDDQA 848
Query: 257 LMQLSVDGDNRDKSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHNE 316
+ D DEIK+Y +C Y+S +A WRIF F++H++ P V +L FHL NE
Sbjct: 849 TALIESDH---------DEIKKYLECTYISGHDACWRIFQFEMHYRYPSVERLPFHLENE 899
Query: 317 Q 317
Q
Sbjct: 900 Q 900
>gb|AAU44208.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1525
Score = 243 bits (621), Expect = 8e-63
Identities = 145/361 (40%), Positives = 190/361 (52%), Gaps = 71/361 (19%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD I RL +IRK+Q +R + GL +A++ G+T A VG++I+L SF G Y
Sbjct: 441 VDALACIIQYRLDWIRKHQGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSFTGSPRY 500
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNL-KASDRPDIVCR------ 130
N QDAM+IC+ GYPDLFVT CN W EIQ+ L E + K SDRPDIV R
Sbjct: 501 KAQNYQDAMAICRWAGYPDLFVTFTCNAAWPEIQNMLDEIGVQKPSDRPDIVDRVFHIKL 560
Query: 131 ------------------------------------VFKMKLDKLMD------------- 141
+F K DK D
Sbjct: 561 RELMTDIKDKQYFGKTLAIIYTIEFQKRGLPHAHILIFLDKKDKCPDASEIDRIISAEIP 620
Query: 142 ----DFEKEECLAKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTIDE-GYPRYK 196
D E E + M H PCG A+ SPCM +C + + K + TT+DE G+P Y+
Sbjct: 621 DKEEDREGFEAVENFMM-HGPCGEAKSNSPCMIENKCIRNFPKKFHSETTVDEDGFPTYR 679
Query: 197 RRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKA 256
RRD G +++K V LDNRYVVPYN LL++Y H+NVE CN+S SIKYLFKY++K D+A
Sbjct: 680 RRDNGRYIEKGNVKLDNRYVVPYNRDLLVKYQAHINVERCNRSKSIKYLFKYMHKGDDQA 739
Query: 257 LMQLSVDGDNRDKSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHNE 316
+ D DEIK+Y +C Y+S +A WRIF F++H++ P V +L FHL NE
Sbjct: 740 TALIESDH---------DEIKKYLECTYISGHDACWRIFQFEMHYRYPSVERLPFHLENE 790
Query: 317 Q 317
Q
Sbjct: 791 Q 791
>gb|AAP54108.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|37535038|ref|NP_921821.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
gi|14140296|gb|AAK54302.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1573
Score = 239 bits (609), Expect = 2e-61
Identities = 141/360 (39%), Positives = 187/360 (51%), Gaps = 64/360 (17%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD YT IE RL +IR+NQ +R + GL +A+ G+T +G++IVL SF GG
Sbjct: 483 VDAYTCIEQCRLSWIRQNQGILRTELYGGLQDALRTGDTRTEKLGRRIVLPASFTGGPRN 542
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFL-KERNLKASDRPDIVCRVFKMKL 136
N QDAM+IC+ G PDLFVT CN W EIQ L K + K S+RPDIV RVF +KL
Sbjct: 543 KEQNYQDAMAICRWAGNPDLFVTFTCNPKWPEIQCMLEKVGHQKPSERPDIVVRVFMIKL 602
Query: 137 DKLMDDFE---------------------------------KEECL-------------- 149
+LM D + KE+CL
Sbjct: 603 RELMSDIKRNQHFGKTKAIIFTIEFQKKGLPHAHILIFLDKKEKCLKPSQIDKMICAEIP 662
Query: 150 -----------AKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTIDE-GYPRYKR 197
K H PCG P SPCM +C +Y+ K + T IDE +P YKR
Sbjct: 663 DSNKDPETFEAVKNFMMHGPCGETNPKSPCMVDHKCDRYFPKGFSDETIIDEVNFPIYKR 722
Query: 198 RDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKAL 257
RD G + K R+ L+N +VVPYN LL+++ H+NVE N+S SI+YLFK + D+A
Sbjct: 723 RDDGRQIKKGRINLNNGFVVPYNKDLLVKFQAHINVEWFNRSKSIRYLFKSIYNGDDQAT 782
Query: 258 MQLSVDGDNRDKSKPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHNEQ 317
+ + D +K DEIK+Y C Y++ EA WRIF F +H++ P V +L FH+ NEQ
Sbjct: 783 AVV----EETDTAKDNDEIKRYLGCSYMTATEACWRIFTFPLHYQEPSVQRLFFHVENEQ 838
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 229 bits (584), Expect = 1e-58
Identities = 133/363 (36%), Positives = 190/363 (51%), Gaps = 65/363 (17%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD Y+ +E RL++I +Q +R + G+ +A+D G +VG+K VL SF GGR Y
Sbjct: 336 VDAYSTVEGSRLKFIHDHQPELRSECVQGIVDAIDHGLESGDSVGKKYVLPSSFTGGRRY 395
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLK-ERNLKASDRPDIVCRVFKMKL 136
M N QDAM++C+ +G PDLFVT CN+ W+EI D L E SDR D++ RVF MK+
Sbjct: 396 MVQNYQDAMAVCRVFGSPDLFVTFTCNSKWQEIYDALVFEPGQVPSDRSDMIVRVFSMKV 455
Query: 137 DKLMDDFEKEECLAKLMQ------------RHVPC-----GGARPFS------------- 166
D+ + D ++ ++ H+ C FS
Sbjct: 456 DEFISDIKEGRTFGPVLAVLYTVEFQKRGLPHIHCIVWRAAADAEFSATAVDSLICAEIP 515
Query: 167 -------------------PCMDR---------GRCTKYYRKNYKGTTTIDE-GYPRYKR 197
PC D+ G C+K++ K ++ TT+DE G+ Y+R
Sbjct: 516 DVFSDPLGYALVDEFMIHGPCGDKNKSCVCMKNGHCSKHFPKGFQEETTMDEFGFTVYRR 575
Query: 198 RDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKAL 257
R+ G +V K + LDNR+VVPYN LL +Y H+NVE CNKSN IKYLFKY+ K D+
Sbjct: 576 RNDGRYVVKNGIKLDNRWVVPYNMKLLKKYQAHINVESCNKSNMIKYLFKYITKGGDRTK 635
Query: 258 MQLSVDGDNRDKS-----KPVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFH 312
+ G+ +K+ P +EI +Y + R++S CEA WR F FDIH++ P V +L H
Sbjct: 636 LYFETTGNTPNKTVDGTVLPPNEIDEYINARFLSTCEAFWRAFEFDIHYRVPAVERLPIH 695
Query: 313 LHN 315
L N
Sbjct: 696 LPN 698
>gb|AAD25621.1| Hypothetical protein [Arabidopsis thaliana]
gi|25353659|pir||A96586 hypothetical protein F20D21.24
[imported] - Arabidopsis thaliana
Length = 1250
Score = 219 bits (558), Expect = 2e-55
Identities = 138/393 (35%), Positives = 200/393 (50%), Gaps = 74/393 (18%)
Query: 1 MQDRVVDYGNVVNSRRS-----VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGE 55
+Q R+ + +V S+R VD YT IE +RLR+ R NQK +R N + +A+ G+
Sbjct: 196 IQTRLTEGMTIVRSKRLLHQYIVDAYTSIEQERLRWYRLNQKKLRADQYNNVKDAVARGD 255
Query: 56 TDASNVGQKIVLQPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVT--------------- 100
TDA ++G++++L S+ G YM DAM+IC+ YG PDLF+T
Sbjct: 256 TDAKSIGKRVILPASYTGSPRYMVEKYHDAMAICRWYGNPDLFITMTTNPKWEEISEHLK 315
Query: 101 ------------IACNTNWREIQDFLKERNLKASDRPDIVCRVFKMKLDK---------- 138
I C ++ + L + N K P + V+ ++ K
Sbjct: 316 TYGNDAANVRPDIECRVFKIKLDELLADFN-KGLFFPKPIAIVYTIEFQKRGLPHAHILL 374
Query: 139 -LMDDFEKE----------------------ECLAKLMQRHVPCGGARPFSPCMDRGRCT 175
L D +K L + H PCG RP SPCM++G C+
Sbjct: 375 WLQGDLKKPTPNDIDKYISAEIPVKDKDPEGHTLVEQHMMHGPCGKDRPSSPCMEKGICS 434
Query: 176 KYYRKNYKGTTTIDE-GYPRYKRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVE 234
K + + + T ++E G+ Y+RR+ +V K + LDNR+VVP+N +L +Y H+NVE
Sbjct: 435 KKFPREFVNHTKMNESGFILYRRRNDQRYVLKGQTRLDNRFVVPHNLEILKKYKAHINVE 494
Query: 235 CCNKSNSIKYLFKYVNKVPDKALMQL----SVDGD---NRDKSKPVDEIKQYYDCRYVSP 287
CNKS++IKYLFKY+ K DKA + SV+G N + KP +EI +Y DCRY+S
Sbjct: 495 WCNKSSAIKYLFKYITKGVDKATFIIQKGNSVNGQGSGNGFEEKPRNEINEYLDCRYLSA 554
Query: 288 CEAVWRIFAFDIHHK*PHVLKLLFHLHNEQGNI 320
CEA+WRIF F+IHH P V +L HL EQ I
Sbjct: 555 CEAMWRIFMFNIHHHNPPVQRLPLHLPGEQSTI 587
>ref|NP_175845.1| hypothetical protein [Arabidopsis thaliana]
Length = 1639
Score = 217 bits (553), Expect = 6e-55
Identities = 139/390 (35%), Positives = 199/390 (50%), Gaps = 75/390 (19%)
Query: 5 VVDYG-NVVNSRRS-----VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDA 58
VV+ G +V S+R VD YT IE +RLR+ R NQK +R N + +A+ G+TDA
Sbjct: 541 VVEKGMTIVRSKRLLHQYIVDAYTSIEQERLRWYRLNQKKLRADQYNNVKDAVARGDTDA 600
Query: 59 SNVGQKIVLQPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVT------------------ 100
++G++++L S+ G YM DAM+IC+ YG PDLF+T
Sbjct: 601 KSIGKRVILPASYTGSPRYMVEKYHDAMAICRWYGNPDLFITMTTNPKWEEISEHLKTYG 660
Query: 101 ---------IACNTNWREIQDFLKERNLKASDRPDIVCRVFKMKLDK-----------LM 140
I C ++ + L + N K P + V+ ++ K L
Sbjct: 661 NDAANVRPDIECRVFKIKLDELLADFN-KGLFFPKPIAIVYTIEFQKRGLPHAHILLWLQ 719
Query: 141 DDFEKE----------------------ECLAKLMQRHVPCGGARPFSPCMDRGRCTKYY 178
D +K L + H PCG RP SPCM++G C+K +
Sbjct: 720 GDLKKPTPNDIDKYISAEIPVKDKDPEGHTLVEQHMMHGPCGKDRPSSPCMEKGICSKKF 779
Query: 179 RKNYKGTTTIDE-GYPRYKRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCN 237
+ + T ++E G+ Y+RR+ +V K + LDNR+VVP+N +L +Y H+NVE CN
Sbjct: 780 PREFVNHTKMNESGFILYRRRNDQRYVLKGQTRLDNRFVVPHNLEILKKYKAHINVEWCN 839
Query: 238 KSNSIKYLFKYVNKVPDKALMQL----SVDGD---NRDKSKPVDEIKQYYDCRYVSPCEA 290
KS++IKYLFKY+ K DKA + SV+G N + KP +EI +Y DCRY+S CEA
Sbjct: 840 KSSAIKYLFKYITKGVDKATFIIQKGNSVNGQGSGNGFEEKPRNEINEYLDCRYLSACEA 899
Query: 291 VWRIFAFDIHHK*PHVLKLLFHLHNEQGNI 320
+WRIF F+IHH P V +L HL EQ I
Sbjct: 900 MWRIFMFNIHHHNPPVQRLPLHLPGEQSTI 929
>ref|XP_463203.1| putative helicase [Oryza sativa (japonica cultivar-group)]
gi|28201555|gb|AAO34493.1| putative helicase [Oryza
sativa (japonica cultivar-group)]
Length = 1629
Score = 209 bits (533), Expect = 1e-52
Identities = 130/338 (38%), Positives = 179/338 (52%), Gaps = 39/338 (11%)
Query: 8 YGNVVNSRRSVDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVL 67
+G + + +VD Y +ES RL Y+ NQK IR + GL +++ GE+ AS VG++ VL
Sbjct: 594 HGGRLFQQFAVDMYIKVESSRLDYVWNNQKEIRADLYQGLMDSIQAGESRASAVGKRTVL 653
Query: 68 QPSFAGGRHYMFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDI 127
SF GG M DAM++ +KYG PD+F+T+ N W EI L E DRPD+
Sbjct: 654 PASFVGGGRNMKRRYMDAMALVQKYGKPDVFLTMTSNPKWDEITREL-EPVQTPQDRPDL 712
Query: 128 VCRVFKMKLDKLMDDFEKEECLAKL-------------------------MQRHVPCGGA 162
V RVF+ KL+ L ++ L K H PCG
Sbjct: 713 VVRVFRAKLEDLKKQLFEKHILGKTNMTASSRLSFQTRKKYPELYNMVVKHMMHGPCGRL 772
Query: 163 RPFSPCMDRGRCTKYYRKNYKGTTTI-DEGYPRYKRRDFGIHVDKQRVL----LDNRYVV 217
CM G+C Y + + TT+ + YP Y+RR+ G K RV+ LDNR+VV
Sbjct: 773 NGRCQCMRDGKCRNNYPREFNPTTSQGKDSYPLYRRRNDG----KSRVVRGHPLDNRWVV 828
Query: 218 PYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKALMQLSVDGDNRDKSKPVDEIK 277
PYNP+LL Y H+NVE C+ ++KYLFKY K DKA S+ + +K+ +DEI+
Sbjct: 829 PYNPYLLRMYNCHMNVEVCSSIKAVKYLFKYHYKGHDKA----SISINEANKNGEIDEIQ 884
Query: 278 QYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHN 315
+Y D R+V P EA+W I+ FDI H P V +L HL N
Sbjct: 885 RYRDARWVIPPEALWCIYGFDICHISPSVRQLQLHLPN 922
>ref|NP_175704.1| hypothetical protein [Arabidopsis thaliana]
gi|12324645|gb|AAG52281.1| hypothetical protein;
100703-104276 [Arabidopsis thaliana]
Length = 996
Score = 182 bits (461), Expect = 3e-44
Identities = 85/164 (51%), Positives = 117/164 (70%), Gaps = 4/164 (2%)
Query: 156 HVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRYKRRDFGIHVDKQRVLLDNR 214
H PCG P SPCM+ G+C KY+ K+Y TT +D +G+P Y+RRD GI+V+K DNR
Sbjct: 112 HGPCGVGHPNSPCMENGKCKKYFPKSYSDTTKVDNDGFPVYRRRDTGIYVEKNGFQCDNR 171
Query: 215 YVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDKALMQLSVDGDNRDKS-KPV 273
YV+PYN + +RY H+NVE CN+S SIKYLFKYV+K D+ + ++V+ +++D + K
Sbjct: 172 YVIPYNEKVSLRYQAHINVELCNQSGSIKYLFKYVHKGHDR--VTVTVEPNDQDTAKKEK 229
Query: 274 DEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHNEQ 317
DE+K Y+DCRYVS CEA+WRIF F IH++ V+KL FH +Q
Sbjct: 230 DEVKDYFDCRYVSACEAMWRIFKFPIHYRTTPVVKLFFHEEGKQ 273
>emb|CAB77939.1| hypothetical protein [Arabidopsis thaliana]
gi|4325356|gb|AAD17353.1| contains similarity to C.
elegans predicted proteins (GB:AF025472, AF04064 and
AF026212) [Arabidopsis thaliana] gi|25407412|pir||B85077
hypothetical protein AT4g07800 [imported] - Arabidopsis
thaliana gi|15235833|ref|NP_192522.1| hypothetical
protein [Arabidopsis thaliana]
Length = 448
Score = 171 bits (432), Expect = 6e-41
Identities = 114/327 (34%), Positives = 161/327 (48%), Gaps = 60/327 (18%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
+D YT+IES RL YI+ NQ +R SF Y
Sbjct: 56 IDAYTIIESNRLAYIKFNQSKLR----------------------------SSFTSASRY 87
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNL-----------KASDRPD 126
M DAM+ICK YG+PD + ++ R+ L ERNL + R
Sbjct: 88 MLQTYYDAMAICKHYGFPDFLSRLRLDSLMRD----LTERNLLRKTVAFKFKKRGLPRAR 143
Query: 127 IVCRVFKMKLDKLMDDFEKEECLAKLMQR---HVPCGGARPFSPCMDRGRCTKYYRKNYK 183
I+ + + + DD E E+ L +L++ H CG A S CM G+C+K Y K ++
Sbjct: 144 ILLFMEANRKLPIADDIETEQELYELIKNSMIHGLCGSANTNSLCMVDGQCSKLYPKKHQ 203
Query: 184 GTTTID-EGYPRYKRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSI 242
T + +GYP Y+RR ++K V DN YVVPYN ++Y H+NVE CN++ SI
Sbjct: 204 ELTKVGADGYPVYRRRPIDGCIEKGGVKCDNMYVVPYN-RFSLKYQAHINVEWCNQNGSI 262
Query: 243 KYLFKYVNKVPDKA--LMQLSVDGDNRDKS----------KPVDEIKQYYDCRYVSPCEA 290
KYLFKY+NK PD+ +++L + N + + K D IK ++D YVS EA
Sbjct: 263 KYLFKYINKGPDRVVFIVELVKEETNSNTTTLGDETVTTKKKKDGIKDWFDYIYVSASEA 322
Query: 291 VWRIFAFDIHHK*PHVLKLLFHLHNEQ 317
+WRIF F I H+ V KL FH+ +Q
Sbjct: 323 IWRIFKFPIQHRSTPVQKLSFHVEGKQ 349
>emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa (japonica cultivar-group)]
gi|50923469|ref|XP_472095.1| OSJNBa0061G20.6 [Oryza
sativa (japonica cultivar-group)]
Length = 1410
Score = 166 bits (421), Expect = 1e-39
Identities = 109/293 (37%), Positives = 142/293 (48%), Gaps = 63/293 (21%)
Query: 86 MSICKKYGYPDLFVTIACNTNWREIQDFL-KERNLKASDRPD------------------ 126
M+IC+ G PDLFVT CN+ W+EI D L E SDR D
Sbjct: 1 MAICRVLGAPDLFVTFTCNSKWQEIYDALIYEPGQVPSDRSDMIVRVFNINEFISDIREG 60
Query: 127 -----IVCRVFKMKLDK----------------------LMDDFEKEE-----------C 148
I+ ++ ++ K ++D F E
Sbjct: 61 NTFGPILAVLYTVEFQKCGLPHIHCIVWLAAQNANFSAAVVDGFISAELPDVFADPLGYA 120
Query: 149 LAKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTIDE-GYPRYKRRDFGIHVDKQ 207
L + H PCG PCM +G C+K++ K ++ T +DE G YKRRD G +V K
Sbjct: 121 LVEEFMIHGPCGVDNKTCPCMKKGSCSKHFPKTFQAETILDEFGLTVYKRRDDGRYVIKN 180
Query: 208 RVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPD--KALMQLSVDGD 265
LDNR VVPYN LL +Y H+NVE CNKSN IKYLFKYV K D K + S
Sbjct: 181 GKKLDNRNVVPYNMKLLKKYQAHINVEWCNKSNMIKYLFKYVTKGSDCTKRYFETSTQTM 240
Query: 266 NRDKSK---PVDEIKQYYDCRYVSPCEAVWRIFAFDIHHK*PHVLKLLFHLHN 315
NR S+ P +EI++Y D R++S CEA WR + FDIH++ P V +L HL N
Sbjct: 241 NRSNSENNAPRNEIQEYIDARFLSTCEAFWRAYEFDIHYRLPSVERLTVHLPN 293
>gb|AAD25596.1| putative helicase [Arabidopsis thaliana] gi|25353661|pir||H84464
probable helicase [imported] - Arabidopsis thaliana
Length = 1219
Score = 162 bits (409), Expect = 3e-38
Identities = 84/197 (42%), Positives = 119/197 (59%), Gaps = 18/197 (9%)
Query: 137 DKLMDDFEKEECLAKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRY 195
DKL D E + K M H PCG P PCM+ G+C+K+Y K++ T ID EG+P Y
Sbjct: 305 DKLKDPELFE--VIKEMMVHGPCGVVNPKCPCMENGKCSKFYPKDHVPKTIIDKEGFPIY 362
Query: 196 KRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDK 255
+RR V K+ DNRYV+PYN L +RY H+NVE CN+S S+KY+FKY++K PD+
Sbjct: 363 RRRRIDDFVQKKDFKCDNRYVIPYNRSLSLRYRAHINVEWCNQSGSVKYIFKYIHKGPDR 422
Query: 256 ALMQL--SVDGDNRDKS-------------KPVDEIKQYYDCRYVSPCEAVWRIFAFDIH 300
+ + S++ N++K K +E++ +++CRYVS CEA WRI + IH
Sbjct: 423 VTVVVGSSLNSKNKEKGKQKVNADTDGSEPKKKNEVEDFFNCRYVSACEAAWRILKYPIH 482
Query: 301 HK*PHVLKLLFHLHNEQ 317
++ V+KL FHL EQ
Sbjct: 483 YRSTSVMKLSFHLPGEQ 499
Score = 128 bits (321), Expect = 5e-28
Identities = 61/134 (45%), Positives = 80/134 (59%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD Y IES RL YI+ NQ ++R N + +A + G+ D G L +F GG Y
Sbjct: 126 VDSYIAIESNRLGYIKLNQSSLRADNYNSVQKASEEGKCDLKYQGLACYLPATFTGGPRY 185
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVFKMKLD 137
M N DAM++CK +G+PD F+T CN W E+ F ERNL+ DRP+I+C++FKMKLD
Sbjct: 186 MRNMYLDAMAVCKHFGFPDYFITFTCNPKWPELIRFCGERNLRVDDRPEIICKIFKMKLD 245
Query: 138 KLMDDFEKEECLAK 151
LM D K L K
Sbjct: 246 SLMLDLTKRNILGK 259
>ref|NP_178583.2| hypothetical protein [Arabidopsis thaliana]
Length = 1238
Score = 162 bits (409), Expect = 3e-38
Identities = 84/197 (42%), Positives = 119/197 (59%), Gaps = 18/197 (9%)
Query: 137 DKLMDDFEKEECLAKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTID-EGYPRY 195
DKL D E + K M H PCG P PCM+ G+C+K+Y K++ T ID EG+P Y
Sbjct: 404 DKLKDPELFE--VIKEMMVHGPCGVVNPKCPCMENGKCSKFYPKDHVPKTIIDKEGFPIY 461
Query: 196 KRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDK 255
+RR V K+ DNRYV+PYN L +RY H+NVE CN+S S+KY+FKY++K PD+
Sbjct: 462 RRRRIDDFVQKKDFKCDNRYVIPYNRSLSLRYRAHINVEWCNQSGSVKYIFKYIHKGPDR 521
Query: 256 ALMQL--SVDGDNRDKS-------------KPVDEIKQYYDCRYVSPCEAVWRIFAFDIH 300
+ + S++ N++K K +E++ +++CRYVS CEA WRI + IH
Sbjct: 522 VTVVVGSSLNSKNKEKGKQKVNADTDGSEPKKKNEVEDFFNCRYVSACEAAWRILKYPIH 581
Query: 301 HK*PHVLKLLFHLHNEQ 317
++ V+KL FHL EQ
Sbjct: 582 YRSTSVMKLSFHLPGEQ 598
Score = 128 bits (321), Expect = 5e-28
Identities = 61/134 (45%), Positives = 80/134 (59%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD Y IES RL YI+ NQ ++R N + +A + G+ D G L +F GG Y
Sbjct: 225 VDSYIAIESNRLGYIKLNQSSLRADNYNSVQKASEEGKCDLKYQGLACYLPATFTGGPRY 284
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDRPDIVCRVFKMKLD 137
M N DAM++CK +G+PD F+T CN W E+ F ERNL+ DRP+I+C++FKMKLD
Sbjct: 285 MRNMYLDAMAVCKHFGFPDYFITFTCNPKWPELIRFCGERNLRVDDRPEIICKIFKMKLD 344
Query: 138 KLMDDFEKEECLAK 151
LM D K L K
Sbjct: 345 SLMLDLTKRNILGK 358
>dbj|BAB11364.1| helicase [Arabidopsis thaliana]
Length = 1523
Score = 153 bits (386), Expect = 1e-35
Identities = 91/285 (31%), Positives = 145/285 (49%), Gaps = 32/285 (11%)
Query: 18 VDCYTMIESQRLRYIRKNQKTIRCGILNGLHEAMDMGETDASNVGQKIVLQPSFAGGRHY 77
VD YT IES L YI+ NQ ++R N + +A + G++D + G L +F GG Y
Sbjct: 557 VDSYTAIESNWLGYIKLNQTSLRAYNYNSVQKASEEGKSDLKDQGLACYLPATFTGGPRY 616
Query: 78 MFNNCQDAMSICKKYGYPDLFVTIACNTNWREIQDFLKERNLKASDR--PDIVCRVFKMK 135
M N DAM++CK +G+PD F+T CN W E+ F ++ R P ++
Sbjct: 617 MRNMYLDAMALCKHFGFPDYFITFTCNPKWPELIRFCAMYTIEFQKRGLPHAHILIWLDS 676
Query: 136 LDKLMDDFEKEECLAKLMQRHVPCGGARPFSPCMDRGRCTKYYRKNYKGTTTIDEGYPRY 195
KL K E + K++ +P D+ + + + + G+P Y
Sbjct: 677 KSKL----TKAEHIDKVISAEIP-----------DKLKDPELFEVIKESMVHGPCGFPIY 721
Query: 196 KRRDFGIHVDKQRVLLDNRYVVPYNPHLLIRYGGHVNVECCNKSNSIKYLFKYVNKVPDK 255
+RR V+K+ DNRYV+PYN L +RY H+NVE CN+S S+KY+FKY++K PD+
Sbjct: 722 RRRRTDDFVEKKDFKCDNRYVIPYNRSLSLRYRAHINVEWCNQSGSVKYIFKYIHKGPDR 781
Query: 256 --ALMQLSVDGDNRDKSKPVD-------------EIKQYYDCRYV 285
+++ S++ N++ K D E++ Y++CR +
Sbjct: 782 VTVVVESSLNSKNKENGKQKDNADTDGSETKKKNEVEDYFNCRRI 826
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.342 0.150 0.514
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 789,464,718
Number of Sequences: 2540612
Number of extensions: 32413829
Number of successful extensions: 85338
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 84941
Number of HSP's gapped (non-prelim): 197
length of query: 489
length of database: 863,360,394
effective HSP length: 132
effective length of query: 357
effective length of database: 527,999,610
effective search space: 188495860770
effective search space used: 188495860770
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (22.0 bits)
S2: 77 (34.3 bits)
Medicago: description of AC125481.7