BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125480.3 + phase: 0
(476 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF18411.1| putative integral membrane protein [Phaseolus vul... 917 0.0
dbj|BAD28481.1| putative Sec61 alpha form 2 [Oryza sativa (japon... 891 0.0
gb|AAN18076.1| At2g34250/F13P17.9 [Arabidopsis thaliana] gi|2159... 880 0.0
gb|AAM13046.1| putative protein transport protein SEC61 alpha su... 879 0.0
ref|NP_174225.1| protein transport protein sec61, putative [Arab... 873 0.0
gb|AAK94784.1| Sec61 alpha subunit [Hordeum vulgare] 873 0.0
gb|AAM65038.1| putative protein transport protein SEC61 alpha su... 872 0.0
ref|NP_177993.1| protein transport protein sec61, putative [Arab... 861 0.0
ref|XP_647801.1| hypothetical protein DDB0206262 [Dictyostelium ... 698 0.0
gb|EAK90569.1| putative Sec61; signal peptide plus 9 transmembra... 690 0.0
ref|XP_665568.1| Pfsec61 [Cryptosporidium hominis] gi|54656318|g... 690 0.0
gb|AAH05458.1| Sec61a2 protein [Mus musculus] gi|10946604|ref|NP... 676 0.0
ref|XP_424024.1| PREDICTED: similar to Sec61 alpha isoform 2, pa... 676 0.0
gb|AAU84942.1| probable transport protein Sec61 alpha subunit [T... 676 0.0
gb|AAM62136.1| Sec61 [Dissostichus mawsoni] gi|32450765|gb|AAM62... 674 0.0
gb|AAH66715.1| SEC61, alpha subunit [Danio rerio] gi|27882231|gb... 674 0.0
gb|AAM52491.1| Sec61-alpha [Gadus ogac] gi|48428630|sp|Q8AY32|S6... 674 0.0
gb|AAM52488.1| Sec61-alpha [Notothenia angustata] gi|23429003|gb... 674 0.0
ref|XP_535191.1| PREDICTED: similar to Sec61 alpha isoform 2 [Ca... 674 0.0
gb|AAK29081.1| Sec61 alpha form A [Oncorhynchus mykiss] gi|48428... 674 0.0
>gb|AAF18411.1| putative integral membrane protein [Phaseolus vulgaris]
Length = 476
Score = 917 bits (2369), Expect = 0.0
Identities = 467/476 (98%), Positives = 472/476 (99%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIA+GEAVAYVLSGMYGSVGQLGVGNAILII+QL FAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGSVGQLGVGNAILIILQLCFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITR+DKVRALREAFYRQ
Sbjct: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYFISQLLHRKYSGNF V+LLGKWKESEYGGG S PVGGIAYYITAPSSLADMAANP
Sbjct: 301 VSNLYFISQLLHRKYSGNFFVDLLGKWKESEYGGGQSAPVGGIAYYITAPSSLADMAANP 360
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFYLVFMLSACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 361 FHALFYLVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF
Sbjct: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
>dbj|BAD28481.1| putative Sec61 alpha form 2 [Oryza sativa (japonica
cultivar-group)] gi|50252404|dbj|BAD28559.1| putative
Sec61 alpha form 2 [Oryza sativa (japonica
cultivar-group)]
Length = 475
Score = 891 bits (2303), Expect = 0.0
Identities = 447/476 (93%), Positives = 468/476 (97%), Gaps = 1/476 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
M GGFRVLHLVRPFL+FLPEVQ+ADRK+PFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILASNRGTVMELGITPIVTSG+VMQLL GSKIIEVDN+VREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIA+GEAVAYVLSGMYGSV QLG GNAILII+QLFFAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
Sbjct: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVL+FLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIIL SAL
Sbjct: 241 NLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
++NLYFISQLL+R+YSGNF+VNLLGKWKESEY GHS+PVGG+AYY+TAPSSLAD+ ANP
Sbjct: 301 ITNLYFISQLLYRRYSGNFLVNLLGKWKESEY-SGHSVPVGGLAYYVTAPSSLADVLANP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFY+VFMLSACALFSKTWIEVSGSSA+DVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 360 FHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERA+ELGFFGF
Sbjct: 420 TAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF 475
>gb|AAN18076.1| At2g34250/F13P17.9 [Arabidopsis thaliana]
gi|21593809|gb|AAM65776.1| putative protein transport
protein SEC61 alpha subunit [Arabidopsis thaliana]
gi|3337356|gb|AAC27401.1| putative protein transport
protein SEC61 alpha subunit [Arabidopsis thaliana]
gi|13605799|gb|AAK32885.1| At2g34250/F13P17.9
[Arabidopsis thaliana] gi|15226261|ref|NP_180972.1|
protein transport protein sec61, putative [Arabidopsis
thaliana] gi|7446500|pir||T02313 endoplasmic reticulum
insertion protein F13P17.9 - Arabidopsis thaliana
Length = 475
Score = 880 bits (2273), Expect = 0.0
Identities = 445/476 (93%), Positives = 467/476 (97%), Gaps = 1/476 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
MGGGFRVLHLVRPFL+FLPEVQ+ADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIA+GEAVAYVLSGMYG VGQLGVGNAILII+QLFFAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT+++KV ALR+AFYRQ
Sbjct: 181 GISLFIATNICESIIWKAFSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYFISQLL+RK+SGNF VNLLG+WKESEY G SIPV G+AY ITAP+S +DMAA+P
Sbjct: 301 VSNLYFISQLLYRKFSGNFFVNLLGQWKESEY-SGQSIPVSGLAYLITAPASFSDMAAHP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFY+VFML+ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 360 FHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF
Sbjct: 420 TAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>gb|AAM13046.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis
thaliana]
Length = 475
Score = 879 bits (2270), Expect = 0.0
Identities = 444/476 (93%), Positives = 467/476 (97%), Gaps = 1/476 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
MGGGFRVLHLVRPFL+FLPEVQ+ADRK+PFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIA+GEAVAYVLSGMYG VGQLGVGNAILII+QLFFAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT+++KV ALR+AFYRQ
Sbjct: 181 GISLFIATNICESIIWKAFSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSK+ARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKSARGQQGSYPIKLFYTSNMPIILQSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYFISQLL+RK+SGNF VNLLG+WKESEY G SIPV G+AY ITAP+S ADMAA+P
Sbjct: 301 VSNLYFISQLLYRKFSGNFFVNLLGQWKESEY-SGQSIPVSGLAYLITAPASFADMAAHP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFY+VFML+ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 360 FHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF
Sbjct: 420 TAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>ref|NP_174225.1| protein transport protein sec61, putative [Arabidopsis thaliana]
gi|25307860|pir||F86415 probable protein transport
protein SEC61 alpha chain - Arabidopsis thaliana
gi|9502410|gb|AAF88109.1| Putative protein transport
protein SEC61 alpha subunit [Arabidopsis thaliana]
Length = 475
Score = 873 bits (2256), Expect = 0.0
Identities = 442/476 (92%), Positives = 465/476 (96%), Gaps = 1/476 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
MGGGFRVLHLVRPFL+FLPEVQ+ADRK+PFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LL IL A+GEAVAYVLSGMYG VGQLGVGNAILII+QLFFAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLWILSAIGEAVAYVLSGMYGPVGQLGVGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT+++KV ALR+AFYRQ
Sbjct: 181 GISLFIATNICESIIWKAFSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSK+ARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKSARGQQGSYPIKLFYTSNMPIILQSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYFISQLL+RK+SGNF VNLLG+WKESEY G SIPV G+AY ITAP+S ADMAA+P
Sbjct: 301 VSNLYFISQLLYRKFSGNFFVNLLGQWKESEY-SGQSIPVSGLAYLITAPASFADMAAHP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFY+VFML+ACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 360 FHALFYIVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAAFGG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF
Sbjct: 420 TAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>gb|AAK94784.1| Sec61 alpha subunit [Hordeum vulgare]
Length = 475
Score = 873 bits (2256), Expect = 0.0
Identities = 436/476 (91%), Positives = 463/476 (96%), Gaps = 1/476 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
M GGFRVLHLVRPFL FLPEVQ+ADR++PFREK+IYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MAGGFRVLHLVRPFLGFLPEVQSADRRIPFREKLIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYW+R ILASNRG+VMELGITPIVTSG+VMQLL GSKIIEVDN+VREDRALLNGAQK
Sbjct: 61 ADPFYWLRAILASNRGSVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIA+GEAVAYVLSGMYGSV QLG GNAILII+QLFFAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVI LFHLLITRTDKVRALREAFYRQ
Sbjct: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIGLFHLLITRTDKVRALREAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVL+FLIVIYFQGFRVVLPVRS+NARGQQGSYPIKLFYTSNMPIIL SAL
Sbjct: 241 NLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSRNARGQQGSYPIKLFYTSNMPIILHSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
++NLYFISQLL++K+SGNF+VNLLG WKESEY GHSIPVGG+AYY+TAPSSLAD+ ANP
Sbjct: 301 ITNLYFISQLLYKKFSGNFLVNLLGIWKESEY-SGHSIPVGGLAYYVTAPSSLADVVANP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFY+VFMLSACALFSKTWIEVSGSSARDVA+QLKEQQMVMPGHRESNL++ELNRYIP
Sbjct: 360 FHALFYVVFMLSACALFSKTWIEVSGSSARDVARQLKEQQMVMPGHRESNLERELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAA GG+CIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERA+ELGFFGF
Sbjct: 420 TAAAIGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF 475
>gb|AAM65038.1| putative protein transport protein SEC61 alpha subunit [Arabidopsis
thaliana]
Length = 475
Score = 872 bits (2254), Expect = 0.0
Identities = 441/476 (92%), Positives = 465/476 (97%), Gaps = 1/476 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
MGGGFRVLHLVRPFL+FLPEVQ+ADRK+PFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MGGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIA+GEAVAYVLSGMYG VGQLG GNAILII+QLFFAGIIVICLDELLQKGYGLGS
Sbjct: 121 LLGILIAIGEAVAYVLSGMYGPVGQLGFGNAILIILQLFFAGIIVICLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE+IIWKAFSPTTIN+GRGAEFEGAVIALFH+LIT+++KV ALR+AFYRQ
Sbjct: 181 GISLFIATNICESIIWKAFSPTTINTGRGAEFEGAVIALFHMLITKSNKVAALRQAFYRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSK+ARGQQGSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKSARGQQGSYPIKLFYTSNMPIILQSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYFISQLL+RK+SGNF VNLLG+WKESEY G SIPV G+AY ITAP+S ADMAA+P
Sbjct: 301 VSNLYFISQLLYRKFSGNFFVNLLGQWKESEY-SGQSIPVSGLAYLITAPASFADMAAHP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFY+VFML+ACALFSKTWIEVSGSSARDV+KQLKEQQMVMPGHRESNLQKELNRYIP
Sbjct: 360 FHALFYIVFMLTACALFSKTWIEVSGSSARDVSKQLKEQQMVMPGHRESNLQKELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 476
TAAAFGG+CIGALTVLADFM AIGSGTGILLAVTIIYQYFETFEKE+ASELGFFGF
Sbjct: 420 TAAAFGGVCIGALTVLADFMRAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF 475
>ref|NP_177993.1| protein transport protein sec61, putative [Arabidopsis thaliana]
gi|3834321|gb|AAC83037.1| Strong similarity to F13P17.9
gi|3337356 transport protein SEC61 alpha subunit homolog
from Arabidopsis thaliana BAC gb|AC004481
gi|25307853|pir||B96816 hypothetical protein F9K20.24
[imported] - Arabidopsis thaliana
Length = 475
Score = 861 bits (2224), Expect = 0.0
Identities = 433/475 (91%), Positives = 463/475 (97%), Gaps = 1/475 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
M GGFRV+HLVRPFL+FLPEVQ+ +RK+PFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
Sbjct: 1 MVGGFRVIHLVRPFLAFLPEVQSPERKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
ADPFYWMRVILAS+RGTVMELGITPIVTSG+VMQLLAGSKIIE+DNNVREDRALLNGAQK
Sbjct: 61 ADPFYWMRVILASSRGTVMELGITPIVTSGMVMQLLAGSKIIEIDNNVREDRALLNGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
LLGILIAVG+AVAYVLSGMYGSVG+LGVGNAILIIVQL FA IIV+CLDELLQKGYGLGS
Sbjct: 121 LLGILIAVGQAVAYVLSGMYGSVGELGVGNAILIIVQLCFAAIIVLCLDELLQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE+IIWKAFSPTTINSGRGA+FEGAVIALFHLLITRTDKVRALREAF+RQ
Sbjct: 181 GISLFIATNICESIIWKAFSPTTINSGRGAQFEGAVIALFHLLITRTDKVRALREAFFRQ 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
NLPNVTNL ATVLIFLIVIYFQGFRVVLPVRSKNARGQ+GSYPIKLFYTSNMPIILQSAL
Sbjct: 241 NLPNVTNLHATVLIFLIVIYFQGFRVVLPVRSKNARGQRGSYPIKLFYTSNMPIILQSAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSN+YFISQ+L+RK+ GNF+VNL+G WKESEY G SIPVGGIAYYITAPSSLA+MA +P
Sbjct: 301 VSNIYFISQILYRKFGGNFLVNLIGTWKESEY-SGQSIPVGGIAYYITAPSSLAEMATHP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
FHALFYLVFML+ACALFSKTWIEVSGSSA+DVA+QL+EQQMVMPGHR+SNLQKELNRYIP
Sbjct: 360 FHALFYLVFMLAACALFSKTWIEVSGSSAKDVARQLREQQMVMPGHRDSNLQKELNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
TAAAFGG+CIGALTVLAD MGAIGSGTGILLAVTIIYQYFETFEKE+ASELGFFG
Sbjct: 420 TAAAFGGLCIGALTVLADLMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFG 474
>ref|XP_647801.1| hypothetical protein DDB0206262 [Dictyostelium discoideum]
gi|60470063|gb|EAL68044.1| hypothetical protein
DDB0206262 [Dictyostelium discoideum]
Length = 475
Score = 698 bits (1801), Expect = 0.0
Identities = 341/472 (72%), Positives = 404/472 (85%), Gaps = 1/472 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
GFR L +V+PF S +PEV DRK+PFREKV++T I LFIFLVCSQ+PLYGI ST +DP
Sbjct: 2 GFRFLDIVKPFTSLVPEVGQPDRKIPFREKVLWTAICLFIFLVCSQIPLYGIRSTDSSDP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYW +VI+ASNRGT+MELGI+PIVTSG+VMQLLAG+K+IE+D +V+ DR L + AQKL G
Sbjct: 62 FYWAKVIMASNRGTLMELGISPIVTSGMVMQLLAGAKLIEIDQSVKADRDLFSAAQKLFG 121
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
+LI VG+ VAY+ SG YG LG GN LI++QLFFAGIIV+ LDELLQKGYG+GSGIS
Sbjct: 122 MLICVGQGVAYIWSGSYGDPAVLGFGNCFLIVLQLFFAGIIVMLLDELLQKGYGIGSGIS 181
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WK FSPTT++ G+G EFEGAVIALFHLL+TR DKVRAL+EAFYRQNLP
Sbjct: 182 LFIATNICETIVWKTFSPTTVSVGKGTEFEGAVIALFHLLLTRNDKVRALKEAFYRQNLP 241
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+TNLLATVLIF++VIYFQGFRV LPV+S GQQG+YPIKLFYTSN+PIILQSALVSN
Sbjct: 242 NITNLLATVLIFMVVIYFQGFRVDLPVKSTRVSGQQGTYPIKLFYTSNIPIILQSALVSN 301
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANPFHA 363
LYFISQLL+R++ N +VNL G W+ SEY IPV G+ YYI++P++++ + A+PFHA
Sbjct: 302 LYFISQLLYRRFPDNILVNLFGAWRTSEY-SQQMIPVSGLTYYISSPNNMSAVLADPFHA 360
Query: 364 LFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAA 423
LFY+ FML++CALFSK WIEVSGSSARDVAKQLK+QQM M GHR++++ KELNRYIPTAA
Sbjct: 361 LFYITFMLTSCALFSKVWIEVSGSSARDVAKQLKDQQMTMKGHRDTSVIKELNRYIPTAA 420
Query: 424 AFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AFGG+CIGALTV+ADFMGAIGSGTGILLAVTIIYQYFETF KE+ G G
Sbjct: 421 AFGGLCIGALTVVADFMGAIGSGTGILLAVTIIYQYFETFVKEQQELSGGIG 472
>gb|EAK90569.1| putative Sec61; signal peptide plus 9 transmembrane
domain-containing protein [Cryptosporidium parvum]
gi|66362634|ref|XP_628283.1| putative Sec61
[Cryptosporidium parvum]
Length = 473
Score = 690 bits (1781), Expect = 0.0
Identities = 334/469 (71%), Positives = 409/469 (86%), Gaps = 1/469 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
M G R L+L++P L +PEV + DR+VPF+E+V++T+ISLF+FLVC Q+PLYG+ S+
Sbjct: 1 MAKGLRFLNLIKPALCVIPEVSSPDRRVPFKERVLWTLISLFVFLVCCQIPLYGVLSSKS 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
+DPFYW+RVILASNRGT+MELGI+PIVTS +VMQLLAGSKII+VD +++EDRAL GAQK
Sbjct: 61 SDPFYWVRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRALFQGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
L G+LI +GEAVAYV+SGMYG + +G NAILII+QLFFAG++VI LDEL+QKGYGLGS
Sbjct: 121 LFGLLITLGEAVAYVISGMYGDIRTIGAWNAILIIIQLFFAGVVVILLDELMQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ DK+ ALREAFYR
Sbjct: 181 GISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLFTKPDKISALREAFYRS 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
+ N+TNLLATVL+FLIVIYFQGFRV L V+ + RGQQGS+PIKLFYTSN+PIILQ+AL
Sbjct: 241 HATNMTNLLATVLVFLIVIYFQGFRVDLAVKYQKVRGQQGSFPIKLFYTSNIPIILQTAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYF SQLL+R++ N +VN+LG+W+E + GG SIPVGGIAYYI+ P+SL D+ ++P
Sbjct: 301 VSNLYFFSQLLYRRFKSNMLVNILGQWQELDV-GGQSIPVGGIAYYISPPNSLVDVVSDP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
H FY+ F+L +CALFSKTWIEVSGSSA+DVAKQL++QQM+M G+R+S+L + LNRYIP
Sbjct: 360 IHTFFYISFVLISCALFSKTWIEVSGSSAKDVAKQLRDQQMIMKGYRDSSLVQVLNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERAS 469
TAAAFGG+CIGALT++ADF+GAIGSGTGILLAVTII+QY+E F KER S
Sbjct: 420 TAAAFGGMCIGALTIIADFLGAIGSGTGILLAVTIIFQYYEMFAKERES 468
>ref|XP_665568.1| Pfsec61 [Cryptosporidium hominis] gi|54656318|gb|EAL35337.1|
Pfsec61 [Cryptosporidium hominis]
Length = 473
Score = 690 bits (1780), Expect = 0.0
Identities = 333/469 (71%), Positives = 409/469 (87%), Gaps = 1/469 (0%)
Query: 1 MGGGFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG 60
M G R L+L++P L +PEV + DR+VPF+E+V++T+ISLF+FLVC Q+PLYG+ S+
Sbjct: 1 MAKGLRFLNLIKPALCVIPEVSSPDRRVPFKERVLWTLISLFVFLVCCQIPLYGVLSSKS 60
Query: 61 ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
+DPFYW+RVILASNRGT+MELGI+PIVTS +VMQLLAGSKII+VD +++EDRAL GAQK
Sbjct: 61 SDPFYWVRVILASNRGTLMELGISPIVTSSMVMQLLAGSKIIDVDQSLKEDRALFQGAQK 120
Query: 121 LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGS 180
L G+LI +GEAVAYV+SGMYG + +G NAILII+QLFFAG++VI LDEL+QKGYGLGS
Sbjct: 121 LFGLLITLGEAVAYVISGMYGDIRTIGAWNAILIIIQLFFAGVVVILLDELMQKGYGLGS 180
Query: 181 GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ 240
GISLFIATNICE I+WKAFSPTT+N+GRG EFEGAVIALFHLL T+ DK+ ALREAFYR
Sbjct: 181 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAVIALFHLLFTKPDKISALREAFYRS 240
Query: 241 NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL 300
+ N+TNLLATVL+FLIVIYFQGFRV L V+ + RGQQGS+PIKLFYTSN+PIILQ+AL
Sbjct: 241 HATNMTNLLATVLVFLIVIYFQGFRVDLAVKYQKVRGQQGSFPIKLFYTSNIPIILQTAL 300
Query: 301 VSNLYFISQLLHRKYSGNFIVNLLGKWKESEYGGGHSIPVGGIAYYITAPSSLADMAANP 360
VSNLYF SQLL+R++ N +VN+LG+W+E + GG SIPVGGIAYYI+ P+SL D+ ++P
Sbjct: 301 VSNLYFFSQLLYRRFKSNMLVNILGQWQELDV-GGQSIPVGGIAYYISPPNSLVDVVSDP 359
Query: 361 FHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP 420
H FY+ F+L +CALFSKTWIEVSGSSA+DVAKQL++QQM+M G+R+S+L + LNRYIP
Sbjct: 360 IHTFFYISFVLISCALFSKTWIEVSGSSAKDVAKQLRDQQMIMKGYRDSSLVQVLNRYIP 419
Query: 421 TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERAS 469
TAAAFGG+CIGALT++ADF+GAIGSGTGILLAVTII+QY+E F KER S
Sbjct: 420 TAAAFGGMCIGALTIIADFLGAIGSGTGILLAVTIIFQYYEMFAKERES 468
>gb|AAH05458.1| Sec61a2 protein [Mus musculus] gi|10946604|ref|NP_067280.1| Sec61,
alpha subunit 2 [Mus musculus]
gi|34876835|ref|XP_341559.1| PREDICTED: similar to Sec61
alpha isoform 2 [Rattus norvegicus]
gi|7673003|gb|AAF66696.1| Sec61 alpha isoform 2 [Mus
musculus] gi|12230591|sp|Q9JLR1|S61A2_MOUSE Protein
transport protein Sec61 alpha subunit isoform 2 (Sec61
alpha-2) gi|13517991|gb|AAK29084.1| Sec61 alpha form 2
[Homo sapiens] gi|48477069|sp|Q9H9S3|S61A2_HUMAN Protein
transport protein Sec61 alpha subunit isoform 2 (Sec61
alpha-2) gi|14589847|ref|NP_060614.2| Sec61 alpha form 2
[Homo sapiens] gi|12004986|gb|AAG44253.1| Sec61 alpha-2
[Mus musculus] gi|26346637|dbj|BAC36967.1| unnamed
protein product [Mus musculus]
Length = 476
Score = 676 bits (1745), Expect = 0.0
Identities = 333/473 (70%), Positives = 401/473 (84%), Gaps = 3/473 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I +G+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTTIN+GRG EFEGAVIALFHLL TRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV +F +VIYFQGFRV LP++S RGQ SYPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L ++SGNF+VNLLG+W + GG S PVGG+ YY++ P S+ + +P H
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 360
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTA
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA 420
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G G
Sbjct: 421 AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 472
>ref|XP_424024.1| PREDICTED: similar to Sec61 alpha isoform 2, partial [Gallus
gallus]
Length = 540
Score = 676 bits (1745), Expect = 0.0
Identities = 333/473 (70%), Positives = 401/473 (84%), Gaps = 3/473 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 66 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 125
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 126 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 184
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I +G+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 185 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 244
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTTIN+GRG EFEGAVIALFHLL TRTDKVRALREAFYRQNLP
Sbjct: 245 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 304
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV +F +VIYFQGFRV LP++S RGQ SYPIKLFYTSN+PIILQSALVSN
Sbjct: 305 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 364
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L ++SGNF+VNLLG+W + GG S PVGG+ YY++ P S+ + +P H
Sbjct: 365 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 424
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTA
Sbjct: 425 VIVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTA 484
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G G
Sbjct: 485 AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGVG 536
>gb|AAU84942.1| probable transport protein Sec61 alpha subunit [Toxoptera
citricida]
Length = 476
Score = 676 bits (1743), Expect = 0.0
Identities = 336/470 (71%), Positives = 400/470 (84%), Gaps = 3/470 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
GF+ L +++PF S LPE+ +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GFKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYW+RVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I VG+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MVITVGQAIVYVMTGMYGDPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTT+N+GRG EFEGAVIALFHLL TR DKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAVIALFHLLATRQDKVRALREAFYRQNLP 240
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NLLATVL+F IVIYFQGFRV LP++S RGQ SYPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLLATVLVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L K+ GN +VNLLG W + GG + PVGG+ YY++ P +L+ +A +P H
Sbjct: 301 LYVISQMLAVKFHGNILVNLLGVWADVGGGGPARAYPVGGLCYYLSPPENLSHIAEDPIH 360
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
A+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTA
Sbjct: 361 AILYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTA 420
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELG 472
AAFGG+CIGAL+VLADFMGAIGSGTGILLAVTIIYQYFE F KE+ SE+G
Sbjct: 421 AAFGGLCIGALSVLADFMGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMG 469
>gb|AAM62136.1| Sec61 [Dissostichus mawsoni] gi|32450765|gb|AAM62135.1| Sec61
[Harpagifer antarcticus]
gi|48428619|sp|Q7T278|S61A_HARAN Protein transport
protein Sec61 alpha subunit
gi|48428618|sp|Q7T277|S61A_DISMA Protein transport
protein Sec61 alpha subunit
Length = 476
Score = 674 bits (1740), Expect = 0.0
Identities = 329/473 (69%), Positives = 398/473 (83%), Gaps = 3/473 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I +G+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTT+N+GRG EFEGA+IALFHLL TRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV +F +VIYFQGFRV LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L ++SGNF+VNLLG W ++ GG + PV G+ YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRE+++ ELNRYIPTA
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA 420
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G
Sbjct: 421 AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
>gb|AAH66715.1| SEC61, alpha subunit [Danio rerio] gi|27882231|gb|AAH44351.1|
SEC61, alpha subunit [Danio rerio]
gi|48428666|sp|Q90ZM2|S611_BRARE Protein transport
protein Sec61 alpha subunit isoform A
Length = 476
Score = 674 bits (1740), Expect = 0.0
Identities = 329/471 (69%), Positives = 399/471 (83%), Gaps = 3/471 (0%)
Query: 6 RVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGISLF 185
I +G+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNV 245
IATNICE I+WKAFSPTT+N+GRG EFEGA+IALFHLL TRTDKVRALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLY 305
NL+ATV +F +VIYFQGFRV LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFHAL 364
ISQ+L ++SGNF+VNLLG W ++ GG + PVGG+ YY++ P S + +P HA+
Sbjct: 303 VISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLDDPVHAV 362
Query: 365 FYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAA 424
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRE+++ ELNRYIPTAAA
Sbjct: 363 IYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAA 422
Query: 425 FGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
FGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G
Sbjct: 423 FGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGSMG 472
>gb|AAM52491.1| Sec61-alpha [Gadus ogac] gi|48428630|sp|Q8AY32|S61A_GADOC Protein
transport protein Sec61 alpha subunit
Length = 476
Score = 674 bits (1739), Expect = 0.0
Identities = 329/473 (69%), Positives = 398/473 (83%), Gaps = 3/473 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I +G+A+ YV++GMYG ++G G ++II+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLVIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTT+N+GRG EFEGA+IALFHLL TRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV +F +VIYFQGFRV LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L ++SGNF+VNLLG W ++ GG + PVGG+ YY + P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYFSPPESFGSVLDDPVH 360
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRE+++ ELNRYIPTA
Sbjct: 361 ASIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA 420
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G
Sbjct: 421 AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
>gb|AAM52488.1| Sec61-alpha [Notothenia angustata] gi|23429003|gb|AAM52487.1|
Sec61-alpha [Pagothenia borchgrevinki]
gi|48428634|sp|Q8AY36|S61A_PAGBO Protein transport
protein Sec61 alpha subunit
gi|48428633|sp|Q8AY35|S61A_NOTAN Protein transport
protein Sec61 alpha subunit
Length = 476
Score = 674 bits (1739), Expect = 0.0
Identities = 329/473 (69%), Positives = 397/473 (83%), Gaps = 3/473 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L ++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I +G+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTT+N+GRG EFEGA+IALFHLL TRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV +F +VIYFQGFRV LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L ++SGNF+VNLLG W ++ GG + PV G+ YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRE+++ ELNRYIPTA
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTA 420
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G
Sbjct: 421 AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
>ref|XP_535191.1| PREDICTED: similar to Sec61 alpha isoform 2 [Canis familiaris]
Length = 540
Score = 674 bits (1739), Expect = 0.0
Identities = 332/471 (70%), Positives = 400/471 (84%), Gaps = 3/471 (0%)
Query: 6 RVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 68 KFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 127
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 128 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 186
Query: 126 IAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGISLF 185
I +G+A+ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 187 ITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLF 246
Query: 186 IATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNV 245
IATNICE I+WKAFSPTTIN+GRG EFEGAVIALFHLL TRTDKVRALREAFYRQNLPN+
Sbjct: 247 IATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNL 306
Query: 246 TNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLY 305
NL+ATV +F +VIYFQGFRV LP++S RGQ SYPIKLFYTSN+PIILQSALVSNLY
Sbjct: 307 MNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLY 366
Query: 306 FISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFHAL 364
ISQ+L ++SGNF+VNLLG+W + GG S PVGG+ YY++ P S+ + +P H +
Sbjct: 367 VISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVV 426
Query: 365 FYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAA 424
Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHR++++ ELNRYIPTAAA
Sbjct: 427 VYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAA 486
Query: 425 FGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
FGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G G
Sbjct: 487 FGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGGMG 536
>gb|AAK29081.1| Sec61 alpha form A [Oncorhynchus mykiss]
gi|48428675|sp|Q98SN9|S611_ONCMY Protein transport
protein Sec61 alpha subunit isoform A
Length = 476
Score = 674 bits (1739), Expect = 0.0
Identities = 328/473 (69%), Positives = 399/473 (84%), Gaps = 3/473 (0%)
Query: 4 GFRVLHLVRPFLSFLPEVQTADRKVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF + LPE+Q +RK+ FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIVQLFFAGIIVICLDELLQKGYGLGSGIS 183
++I +G+++ YV++GMYG ++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQSIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLP 243
LFIATNICE I+WKAFSPTT+N+GRG EFEGA+IALFHLL TRTDKVRALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV +F +VIYFQGFRV LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLHRKYSGNFIVNLLGKWKESEYGG-GHSIPVGGIAYYITAPSSLADMAANPFH 362
LY ISQ+L ++SGNF+VNLLG W ++ GG + PVGG+ Y+++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIH 360
Query: 363 ALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTA 422
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQMVM GHRE+++ ELNRYIPTA
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMGGHRETSMVHELNRYIPTA 420
Query: 423 AAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFG 475
AAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ SE+G G
Sbjct: 421 AAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGSMG 472
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.326 0.143 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 777,475,235
Number of Sequences: 2540612
Number of extensions: 32492243
Number of successful extensions: 126755
Number of sequences better than 10.0: 424
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 125913
Number of HSP's gapped (non-prelim): 539
length of query: 476
length of database: 863,360,394
effective HSP length: 132
effective length of query: 344
effective length of database: 527,999,610
effective search space: 181631865840
effective search space used: 181631865840
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)
Medicago: description of AC125480.3