Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC125478.4 + phase: 0 
         (260 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAB72167.1| putative protein [Arabidopsis thaliana] gi|20127...   175  1e-42
emb|CAB72168.1| putative protein [Arabidopsis thaliana] gi|20127...   173  5e-42
gb|AAC78547.1| hypothetical protein [Arabidopsis thaliana] gi|18...   162  9e-39
ref|NP_850349.1| basic helix-loop-helix (bHLH) family protein [A...   155  8e-37
ref|NP_914664.1| P0431G06.12 [Oryza sativa (japonica cultivar-gr...   137  4e-31
emb|CAC05497.1| myc-like protein [Arabidopsis thaliana] gi|15237...   134  3e-30
emb|CAB81352.1| putative protein [Arabidopsis thaliana] gi|51239...    56  9e-07
emb|CAB81351.1| putative protein [Arabidopsis thaliana] gi|51239...    56  9e-07
ref|NP_913126.1| P0498B01.17 [Oryza sativa (japonica cultivar-gr...    54  4e-06
dbj|BAD72430.1| basic helix-loop-helix protein-like [Oryza sativ...    54  4e-06
dbj|BAD28357.1| DNA binding protein-like [Oryza sativa (japonica...    52  1e-05
gb|AAR24730.1| At5g51780 [Arabidopsis thaliana] gi|10177877|dbj|...    52  2e-05
dbj|BAB11248.1| unnamed protein product [Arabidopsis thaliana] g...    52  2e-05
gb|AAB00686.1| phaseolin G-box binding protein PG1 gi|7488773|pi...    51  3e-05
emb|CAB78790.1| bHLH protein-like [Arabidopsis thaliana] gi|2894...    51  4e-05
gb|AAL55711.1| putative transcription factor BHLH4 [Arabidopsis ...    51  4e-05
gb|AAT42155.1| b1-1 [Sorghum bicolor]                                  50  5e-05
emb|CAA33805.1| unnamed protein product [Zea mays] gi|82721|pir|...    50  8e-05
emb|CAF74711.1| MYC transcription factor [Solanum tuberosum]           50  8e-05
pir||T14726 myc-like regulatory R protein - sorghum (fragment) g...    50  8e-05

>emb|CAB72167.1| putative protein [Arabidopsis thaliana] gi|20127034|gb|AAM10940.1|
           putative bHLH transcription factor [Arabidopsis
           thaliana] gi|62320432|dbj|BAD94899.1| putative bHLH
           transcription factor [Arabidopsis thaliana]
           gi|15230177|ref|NP_191256.1| basic helix-loop-helix
           (bHLH) family protein [Arabidopsis thaliana]
           gi|11282360|pir||T47757 hypothetical protein F24I3.50 -
           Arabidopsis thaliana
          Length = 253

 Score =  175 bits (443), Expect = 1e-42
 Identities = 95/213 (44%), Positives = 145/213 (67%), Gaps = 11/213 (5%)

Query: 39  YSLPYHQ----FSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPG 94
           Y + +HQ     S   E  EI+  P   ++ KKLNHNASERDRRKKIN+L SSLRS LP 
Sbjct: 44  YEVTHHQNSLGVSVSSEGNEIDNNP---VVVKKLNHNASERDRRKKINTLFSSLRSCLPA 100

Query: 95  EDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPN 154
            DQ+KK+SIP T+S+ LKYIP+LQ+QV+ L +KKEE+L R+S ++++ +  + Q K + +
Sbjct: 101 SDQSKKLSIPETVSKSLKYIPELQQQVKRLIQKKEEILVRVSGQRDFELYDKQQPKAVAS 160

Query: 155 YNSAFVVSTSRLNDTELVIHISSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFY 214
           Y S   VS +RL D E+++ +SS + +   +S +L  +E +G +L++ SSS++ G RLFY
Sbjct: 161 YLS--TVSATRLGDNEVMVQVSSSKIHNFSISNVLGGIEEDGFVLVDVSSSRSQGERLFY 218

Query: 215 NLHFQVDKTQRYE--CDDLIQKLSSIYEKQQNN 245
            LH QV+    Y+  C++L +++  +YEK +N+
Sbjct: 219 TLHLQVENMDDYKINCEELSERMLYLYEKCENS 251


>emb|CAB72168.1| putative protein [Arabidopsis thaliana] gi|20127036|gb|AAM10941.1|
           putative bHLH transcription factor [Arabidopsis
           thaliana] gi|15230178|ref|NP_191257.1| basic
           helix-loop-helix (bHLH) family protein [Arabidopsis
           thaliana] gi|11282361|pir||T47758 hypothetical protein
           F24I3.60 - Arabidopsis thaliana
          Length = 258

 Score =  173 bits (438), Expect = 5e-42
 Identities = 109/265 (41%), Positives = 155/265 (58%), Gaps = 25/265 (9%)

Query: 1   MVAFCPPQFSYSNMGW-LLEELEPESLISHKEKNYASLEYSLPYHQF------------- 46
           M A  PP F   N GW    E +   L      N   L++ +P   +             
Sbjct: 1   MCALVPPLFP--NFGWPSTGEYDSYYLAGDILNNGGFLDFPVPEETYGAVTAVTQHQNSF 58

Query: 47  --SSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIP 104
             S   E  EI+  P   ++ KKLNHNASERDRR+KINSL SSLRS LP   Q+KK+SIP
Sbjct: 59  GVSVSSEGNEIDNNP---VVVKKLNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIP 115

Query: 105 VTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTS 164
            T+SR LKYIP+LQ+QV+ L KKKEELL +IS ++      +   K + NY S   VS +
Sbjct: 116 ATVSRSLKYIPELQEQVKKLIKKKEELLVQISGQRNTECYVKQPPKAVANYIS--TVSAT 173

Query: 165 RLNDTELVIHISSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQ 224
           RL D E+++ ISS + +   +S +L  LE +  +L++ SSS++ G RLFY LH QV+K +
Sbjct: 174 RLGDNEVMVQISSSKIHNFSISNVLSGLEEDRFVLVDMSSSRSQGERLFYTLHLQVEKIE 233

Query: 225 RYE--CDDLIQKLSSIYEKQQNNHL 247
            Y+  C++L Q++  +YE+  N+++
Sbjct: 234 NYKLNCEELSQRMLYLYEECGNSYI 258


>gb|AAC78547.1| hypothetical protein [Arabidopsis thaliana]
           gi|18491253|gb|AAL69451.1| At2g41240/F13H10.21
           [Arabidopsis thaliana] gi|15227308|ref|NP_181657.1|
           basic helix-loop-helix (bHLH) family protein
           [Arabidopsis thaliana] gi|25352412|pir||E84839
           hypothetical protein At2g41240 [imported] - Arabidopsis
           thaliana
          Length = 242

 Score =  162 bits (410), Expect = 9e-39
 Identities = 95/246 (38%), Positives = 149/246 (59%), Gaps = 15/246 (6%)

Query: 1   MVAFCPPQFSYSNMGWLLEELEPESLISHKEKNYASLEYSLP-----YHQFSSPKEHVEI 55
           M A  PP   Y N GW   +    S     + +   L++ LP     +   SS      +
Sbjct: 1   MCALVPPL--YPNFGWPCGD---HSFYETDDVSNTFLDFPLPDLTVTHENVSSENNRTLL 55

Query: 56  ERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIP 115
           + P    ++ KKLNHNASER+RRKKIN++ SSLRS LP  +QTKK+S+  T+S+ LKYIP
Sbjct: 56  DNP----VVMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIP 111

Query: 116 DLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHI 175
           +LQ+QV+ L KKKEEL  +IS +++     ++ + +    + A  VS++RL++TE+++ I
Sbjct: 112 ELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQI 171

Query: 176 SSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLIQKL 235
           SS +  K     +L  +E +GL+L+ +SSS++ G RLFY++H Q+ K  +   ++L  +L
Sbjct: 172 SSLQTEKCSFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI-KNGQVNSEELGDRL 230

Query: 236 SSIYEK 241
             +YEK
Sbjct: 231 LYLYEK 236


>ref|NP_850349.1| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana]
          Length = 241

 Score =  155 bits (393), Expect = 8e-37
 Identities = 94/246 (38%), Positives = 148/246 (59%), Gaps = 16/246 (6%)

Query: 1   MVAFCPPQFSYSNMGWLLEELEPESLISHKEKNYASLEYSLP-----YHQFSSPKEHVEI 55
           M A  PP   Y N GW   +    S     + +   L++ LP     +   SS      +
Sbjct: 1   MCALVPPL--YPNFGWPCGD---HSFYETDDVSNTFLDFPLPDLTVTHENVSSENNRTLL 55

Query: 56  ERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIP 115
           + P    ++ KKLNHNASER+RRKKIN++ SSLRS LP  +QTK +S+  T+S+ LKYIP
Sbjct: 56  DNP----VVMKKLNHNASERERRKKINTMFSSLRSCLPPTNQTK-LSVSATVSQALKYIP 110

Query: 116 DLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHI 175
           +LQ+QV+ L KKKEEL  +IS +++     ++ + +    + A  VS++RL++TE+++ I
Sbjct: 111 ELQEQVKKLMKKKEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQI 170

Query: 176 SSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLIQKL 235
           SS +  K     +L  +E +GL+L+ +SSS++ G RLFY++H Q+ K  +   ++L  +L
Sbjct: 171 SSLQTEKCSFGNVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQI-KNGQVNSEELGDRL 229

Query: 236 SSIYEK 241
             +YEK
Sbjct: 230 LYLYEK 235


>ref|NP_914664.1| P0431G06.12 [Oryza sativa (japonica cultivar-group)]
           gi|15528806|dbj|BAB64701.1| bHLH transcription
           factor-like [Oryza sativa (japonica cultivar-group)]
          Length = 248

 Score =  137 bits (344), Expect = 4e-31
 Identities = 76/177 (42%), Positives = 114/177 (63%), Gaps = 8/177 (4%)

Query: 66  KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
           +KL+HNA ERDRRK++N L SSLR+LLP  D TKK+SIP T+SRVLKYIP+LQKQV+ L 
Sbjct: 69  RKLSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQVENLE 128

Query: 126 KKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHI---SSYEANK 182
           +KK+EL +  +   +  V       ++ +   A +VS + +ND E+++ +   S+   + 
Sbjct: 129 RKKKELTTTSTTNCKPGV----LGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNVAGSV 184

Query: 183 IPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQ-VDKTQRYECDDLIQKLSSI 238
           +PLS+ +  LEN GL  ++SS+S  FG R FY++H Q  + T   EC    ++L  +
Sbjct: 185 LPLSKCIKVLENEGLHFISSSTSSGFGNRTFYSIHLQRSEGTINEECPAFCERLEKV 241


>emb|CAC05497.1| myc-like protein [Arabidopsis thaliana]
           gi|15237636|ref|NP_196035.1| basic helix-loop-helix
           (bHLH) family protein [Arabidopsis thaliana]
           gi|26185711|emb|CAD58594.1| putative bHLH transcription
           factor [Arabidopsis thaliana]
          Length = 240

 Score =  134 bits (336), Expect = 3e-30
 Identities = 70/170 (41%), Positives = 116/170 (68%), Gaps = 2/170 (1%)

Query: 63  LMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQ 122
           ++ KKLNHNASERDRR+K+N+L SSLR+LLP  DQ +K+SIP+T++RV+KYIP+ ++++Q
Sbjct: 63  VLEKKLNHNASERDRRRKLNALYSSLRALLPLSDQKRKLSIPMTVARVVKYIPEQKQELQ 122

Query: 123 GLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEANK 182
            L+++KEELL RIS +      +        + +S+  ++ + L DTE+ + I++ +   
Sbjct: 123 RLSRRKEELLKRISRKTHQEQLRNKAMMDSIDSSSSQRIAANWLTDTEIAVQIATSKWTS 182

Query: 183 IPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLI 232
           +  S++L+ LE NGL +++ SSS +   R+FY LH Q+    +   ++LI
Sbjct: 183 V--SDMLLRLEENGLNVISVSSSVSSTARIFYTLHLQMRGDCKVRLEELI 230


>emb|CAB81352.1| putative protein [Arabidopsis thaliana] gi|5123930|emb|CAB45518.1|
           putative protein [Arabidopsis thaliana]
           gi|15235069|ref|NP_194271.1| basix helix-loop-helix
           (bHLH) family protein [Arabidopsis thaliana]
           gi|7487582|pir||T10221 hypothetical protein T30C3.80 -
           Arabidopsis thaliana
          Length = 221

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 37/167 (22%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 66  KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
           KKL H   ER RR+++ +L ++LR+ LP +    K ++   ++  + +I D + +++ L+
Sbjct: 43  KKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELS 102

Query: 126 KKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEANKIPL 185
            +++EL        +   +       +     A V+    ++  E+V+  +S     +PL
Sbjct: 103 ARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPL 162

Query: 186 SEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLI 232
           S++L  ++  GL +++S +++    RL + +  +V+    + C DL+
Sbjct: 163 SKVLETIQEKGLEVMSSFTTRV-NDRLMHTIQVEVNS---FGCIDLL 205


>emb|CAB81351.1| putative protein [Arabidopsis thaliana] gi|5123929|emb|CAB45517.1|
           putative protein [Arabidopsis thaliana]
           gi|23297054|gb|AAN13079.1| unknown protein [Arabidopsis
           thaliana] gi|15235066|ref|NP_194270.1| basix
           helix-loop-helix (bHLH) family protein [Arabidopsis
           thaliana] gi|7487581|pir||T10220 hypothetical protein
           T30C3.70 - Arabidopsis thaliana
          Length = 163

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 12/171 (7%)

Query: 66  KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
           +KL H   E+ RR+++ SL +SLRSLLP E    K S    +   + YI  LQ+ ++ + 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 126 KKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEANKIPL 185
            K+++L+  +   + +  + E +  +I N+    VV    L   E+V+ I      + P 
Sbjct: 62  SKRDDLV--LLSGRSFRSSNEQEWNEISNH----VVIRPCLVGIEIVLSIL-----QTPF 110

Query: 186 SEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVDKTQRYECDDLIQKLS 236
           S +L  L  +GL +L    S +   RL + L  +V+     +  DL   L+
Sbjct: 111 SSVLQVLREHGLYVLGYICS-SVNDRLIHTLQAEVNDLALIDLADLKDTLT 160


>ref|NP_913126.1| P0498B01.17 [Oryza sativa (japonica cultivar-group)]
          Length = 355

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 29  HKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSL 88
           H E  Y   +Y   Y+Q ++       E  P P     +L H  SER RR+K+N    +L
Sbjct: 217 HMETTYRRRQY---YYQQAA----AAAEAAPPPPSGNNQLQHTMSERKRREKLNDSFVAL 269

Query: 89  RSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQ 148
           +++LP   +  K SI   + R  +Y+  L+ ++  L +K  EL +R+S R +   N E +
Sbjct: 270 KAVLPPGSKKDKTSI---LIRAREYVKSLESKLSELEEKNRELEARLSTRPDDTKNDEEE 326


>dbj|BAD72430.1| basic helix-loop-helix protein-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 338

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 29  HKEKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSL 88
           H E  Y   +Y   Y+Q ++       E  P P     +L H  SER RR+K+N    +L
Sbjct: 201 HMETTYRRRQY---YYQQAA----AAAEAAPPPPSGNNQLQHTMSERKRREKLNDSFVAL 253

Query: 89  RSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQ 148
           +++LP   +  K SI   + R  +Y+  L+ ++  L +K  EL +R+S R +   N E +
Sbjct: 254 KAVLPPGSKKDKTSI---LIRAREYVKSLESKLSELEEKNRELEARLSTRPDDTKNDEEE 310


>dbj|BAD28357.1| DNA binding protein-like [Oryza sativa (japonica cultivar-group)]
          Length = 363

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 43/182 (23%), Positives = 77/182 (41%), Gaps = 23/182 (12%)

Query: 62  KLMAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQV 121
           K +A   +H+ +ER RR++IN  ++ LRSLLP   +T K S+   ++ V++++ +L++Q 
Sbjct: 102 KALAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASL---LAEVIEHVKELKRQT 158

Query: 122 QGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEAN 181
                     ++  +   +Y  N E     +    SA           EL +  +     
Sbjct: 159 TA--------IAAAAAAGDYHGNDEDDDDAVVGRRSAAAQQLLPTEADELAVDAAVDAEG 210

Query: 182 KIPLSEILMCLENNGL------------LLLNSSSSKTFGGRLFYNLHFQVDKTQRYECD 229
           K+ +   L C +   L            L    +   T GGR+   L    D+ Q+  CD
Sbjct: 211 KLVVRASLCCEDRPDLIPDIARALAALRLRARRAEITTLGGRVRSVLLITADEQQQQHCD 270

Query: 230 DL 231
           D+
Sbjct: 271 DV 272


>gb|AAR24730.1| At5g51780 [Arabidopsis thaliana] gi|10177877|dbj|BAB11247.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15242184|ref|NP_199991.1| basix helix-loop-helix
           (bHLH) family protein [Arabidopsis thaliana]
           gi|44681412|gb|AAS47646.1| At5g51780 [Arabidopsis
           thaliana]
          Length = 174

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 49/158 (31%), Positives = 79/158 (49%), Gaps = 6/158 (3%)

Query: 66  KKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLT 125
           +K+ H  +ER RR+++ SL +SLRSLLP      K S    ++  + YI  LQ++++ L+
Sbjct: 2   EKMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELS 61

Query: 126 KKKEEL--LSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEANKI 183
            ++++L  LSR S       + +   + I   N   VV    L   E+++  S     + 
Sbjct: 62  VRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKN--HVVVRQCLVGVEIMLS-SRCCGGQP 118

Query: 184 PLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHFQVD 221
             S +L  L   GL LLNS SS     RL Y +  +V+
Sbjct: 119 RFSSVLQVLSEYGLCLLNSISS-IVDDRLVYTIQAEVN 155


>dbj|BAB11248.1| unnamed protein product [Arabidopsis thaliana]
           gi|15242185|ref|NP_199992.1| basix helix-loop-helix
           (bHLH) family protein [Arabidopsis thaliana]
          Length = 209

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 15/197 (7%)

Query: 44  HQFSSPKEHVEIERPPSPKLMAKKLNHNASERDRRKKINSLISSLRSLLP-----GEDQT 98
           HQ   P+E  E ++        KKL H   ER RR+++  L +SLRS LP          
Sbjct: 12  HQSHMPQERDETKKE-------KKLLHRNIERQRRQEMAILFASLRSQLPLKYIKALSSQ 64

Query: 99  KKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYAVNKESQRKKIPNYNSA 158
            K ++   ++  + +I D Q +++ L+ +++EL   I      ++              A
Sbjct: 65  GKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIG--DPTSLTGSGSGSGSSRSEPA 122

Query: 159 FVVSTSRLNDTELVIHISSYEANKIPLSEILMCLENNGLLLLNSSSSKTFGGRLFYNLHF 218
            V+    ++  E+V+   +      PLS +L  L   GL +++S +++    RL Y +  
Sbjct: 123 SVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARV-NERLMYTIQV 181

Query: 219 QVDKTQRYECDDLIQKL 235
           +V+    ++   L QKL
Sbjct: 182 EVNSFDCFDLAWLQQKL 198


>gb|AAB00686.1| phaseolin G-box binding protein PG1 gi|7488773|pir||T10861
           phaseolin G-box binding protein PG1 - kidney bean
          Length = 642

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 35/116 (30%), Positives = 57/116 (48%), Gaps = 6/116 (5%)

Query: 68  LNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKK 127
           LNH  +ER RR+K+N    +LR+++P   +  K S+   +   + YI +L+ ++  L  +
Sbjct: 461 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL---LGDAISYINELKSKLSELESE 517

Query: 128 KEEL---LSRISHRQEYAVNKESQRKKIPNYNSAFVVSTSRLNDTELVIHISSYEA 180
           K EL   L  +    E A    S     P  N     +TS+L D EL + I  ++A
Sbjct: 518 KGELEKQLELVKKELELATKSPSPPPGPPPSNKEAKETTSKLIDLELEVKIIGWDA 573


>emb|CAB78790.1| bHLH protein-like [Arabidopsis thaliana] gi|2894597|emb|CAA17131.1|
           bHLH protein-like [Arabidopsis thaliana]
           gi|62320362|dbj|BAD94748.1| putative transcription
           factor BHLH4 [Arabidopsis thaliana]
           gi|15236692|ref|NP_193522.1| basic helix-loop-helix
           (bHLH) family protein [Arabidopsis thaliana]
           gi|7487779|pir||T05074 hypothetical protein T6K21.60 -
           Arabidopsis thaliana
          Length = 589

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 40/141 (28%), Positives = 68/141 (47%), Gaps = 16/141 (11%)

Query: 31  EKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKK--------LNHNASERDRRKKIN 82
           + N++ LE S+     S+    V +E    P+   +K        LNH  +ER RR+K+N
Sbjct: 373 DSNHSDLEASVAKEAESN---RVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLN 429

Query: 83  SLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYA 142
               SLR+++P   +  K S+   +   + YI +L+ ++Q     KEEL  +I    + A
Sbjct: 430 QRFYSLRAVVPNVSKMDKASL---LGDAISYISELKSKLQKAESDKEELQKQIDVMNKEA 486

Query: 143 VNKESQRK--KIPNYNSAFVV 161
            N +S  K  K  N  S+ ++
Sbjct: 487 GNAKSSVKDRKCLNQESSVLI 507


>gb|AAL55711.1| putative transcription factor BHLH4 [Arabidopsis thaliana]
          Length = 589

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 40/141 (28%), Positives = 68/141 (47%), Gaps = 16/141 (11%)

Query: 31  EKNYASLEYSLPYHQFSSPKEHVEIERPPSPKLMAKK--------LNHNASERDRRKKIN 82
           + N++ LE S+     S+    V +E    P+   +K        LNH  +ER RR+K+N
Sbjct: 373 DSNHSDLEASVAKEAESN---RVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLN 429

Query: 83  SLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKKEELLSRISHRQEYA 142
               SLR+++P   +  K S+   +   + YI +L+ ++Q     KEEL  +I    + A
Sbjct: 430 QRFYSLRAVVPNVSKMDKASL---LGDAISYISELKSKLQKAESDKEELQKQIDVMNKEA 486

Query: 143 VNKESQRK--KIPNYNSAFVV 161
            N +S  K  K  N  S+ ++
Sbjct: 487 GNAKSSVKDRKCLNQESSVLI 507


>gb|AAT42155.1| b1-1 [Sorghum bicolor]
          Length = 509

 Score = 50.4 bits (119), Expect = 5e-05
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 8/88 (9%)

Query: 69  NHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKK 128
           NH  SER RR+K+N +   L+SL+P   +  K SI   ++  + Y+ +LQ++VQ L +  
Sbjct: 314 NHVMSERKRREKLNEMFLILKSLVPSIHKVDKASI---LAETIAYLKELQRRVQEL-ESS 369

Query: 129 EELLSRISHRQEYAV----NKESQRKKI 152
            EL SR S           NKES RKK+
Sbjct: 370 RELTSRPSETTRPITRQHGNKESVRKKL 397


>emb|CAA33805.1| unnamed protein product [Zea mays] gi|82721|pir||S06072 regulatory
           protein R-S - maize gi|114217|sp|P13027|ARRS_MAIZE
           Anthocyanin regulatory R-S protein
          Length = 612

 Score = 49.7 bits (117), Expect = 8e-05
 Identities = 33/95 (34%), Positives = 51/95 (52%), Gaps = 10/95 (10%)

Query: 64  MAKKLNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQG 123
           M+   NH  SER RR+K+N +   L+SLLP   +  K SI   ++  + Y+ +LQ++VQ 
Sbjct: 413 MSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASI---LAETIAYLKELQRRVQE 469

Query: 124 LTKKKE------ELLSRISHRQEYAVNKESQRKKI 152
           L   +E      E  +R+  R     N ES RK++
Sbjct: 470 LESSREPASRPSETTTRLITRPSRG-NNESVRKEV 503


>emb|CAF74711.1| MYC transcription factor [Solanum tuberosum]
          Length = 646

 Score = 49.7 bits (117), Expect = 8e-05
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 68  LNHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKK 127
           LNH  +ER RR+K+N    +LR+++P   +  K S+   +   + YI +L+ +VQ     
Sbjct: 472 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL---LGDAIAYINELKSKVQNSDLD 528

Query: 128 KEELLSRISHRQEYAVNKESQRKKIPNYNSA 158
           KEEL S+I      ++ KE   K   NY+S+
Sbjct: 529 KEELRSQIE-----SLRKELANKGSSNYSSS 554


>pir||T14726 myc-like regulatory R protein - sorghum (fragment)
           gi|527667|gb|AAA80176.1| myc-like regulatory R gene
           product
          Length = 145

 Score = 49.7 bits (117), Expect = 8e-05
 Identities = 32/89 (35%), Positives = 50/89 (55%), Gaps = 9/89 (10%)

Query: 69  NHNASERDRRKKINSLISSLRSLLPGEDQTKKMSIPVTISRVLKYIPDLQKQVQGLTKKK 128
           NH  SER RR+K+N +   L+ L+P   +  K+S+   ++  + Y+ +LQ++VQ L K  
Sbjct: 2   NHVMSERKRREKLNEMFLILKLLVPSIQKVAKVSL---LAETIAYLKELQRKVQEL-KSS 57

Query: 129 EELLSRISH-----RQEYAVNKESQRKKI 152
            ELLSR S       +   +  ES RKK+
Sbjct: 58  RELLSRPSETTARPTKPCGIGSESVRKKL 86


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.314    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,929,021
Number of Sequences: 2540612
Number of extensions: 16631994
Number of successful extensions: 48334
Number of sequences better than 10.0: 1144
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 684
Number of HSP's that attempted gapping in prelim test: 47594
Number of HSP's gapped (non-prelim): 1276
length of query: 260
length of database: 863,360,394
effective HSP length: 125
effective length of query: 135
effective length of database: 545,783,894
effective search space: 73680825690
effective search space used: 73680825690
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 74 (33.1 bits)


Medicago: description of AC125478.4