BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC125368.9 + phase: 0
(216 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA90080.1| small GTP-binding protein [Pisum sativum] gi|136... 417 e-116
dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum] 416 e-115
dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum] 416 e-115
dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum] 414 e-115
gb|AAD46405.1| ethylene-responsive small GTP-binding protein [Ly... 410 e-113
emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana] gi|21555222... 409 e-113
dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabido... 409 e-113
emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]... 408 e-113
emb|CAA04701.1| small GTP-binding protein [Daucus carota] 408 e-113
emb|CAA90082.1| small GTP-binding protein [Pisum sativum] gi|136... 405 e-112
dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum] g... 405 e-112
emb|CAA90081.1| small GTP-binding protein [Pisum sativum] gi|136... 402 e-111
emb|CAA98174.1| RAB8C [Lotus corniculatus var. japonicus] 402 e-111
emb|CAA49600.1| GTP-binding protein [Lycopersicon esculentum] gi... 402 e-111
emb|CAA98175.1| RAB8D [Lotus corniculatus var. japonicus] 400 e-110
emb|CAA98172.1| RAB8A [Lotus corniculatus var. japonicus] 399 e-110
ref|XP_477215.1| putative ethylene-responsive small GTP-binding ... 397 e-110
emb|CAA90079.1| small G protein [Pisum sativum] gi|1362064|pir||... 395 e-109
emb|CAA98176.1| RAB8E [Lotus corniculatus var. japonicus] 395 e-109
ref|XP_470131.1| ethylene-responsive small GTP-binding protein [... 393 e-108
>emb|CAA90080.1| small GTP-binding protein [Pisum sativum] gi|1362066|pir||S57471
GTP-binding protein GTP6 - garden pea
Length = 216
Score = 417 bits (1073), Expect = e-116
Identities = 207/216 (95%), Positives = 215/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NV+EVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LA+TDSK+EPQT+KINQPDQGAG+AQA QKSACCGS
Sbjct: 181 LAETDSKTEPQTLKINQPDQGAGSAQATQKSACCGS 216
>dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 416 bits (1070), Expect = e-115
Identities = 207/216 (95%), Positives = 214/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LA++D+++EPQTI+INQPDQGAG AQ AQKSACCGS
Sbjct: 181 LAESDNRAEPQTIRINQPDQGAGGAQTAQKSACCGS 216
>dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 416 bits (1068), Expect = e-115
Identities = 207/216 (95%), Positives = 214/216 (98%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LA++DSK+EPQTI+INQPDQ AGA+Q+ QKSACCGS
Sbjct: 181 LAESDSKAEPQTIRINQPDQAAGASQSVQKSACCGS 216
>dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 414 bits (1065), Expect = e-115
Identities = 207/216 (95%), Positives = 213/216 (97%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MA PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MATPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 SKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LA++DSK+EPQTI+INQPDQ AGAAQ+AQKSACCGS
Sbjct: 181 LAESDSKAEPQTIRINQPDQAAGAAQSAQKSACCGS 216
>gb|AAD46405.1| ethylene-responsive small GTP-binding protein [Lycopersicon
esculentum]
Length = 216
Score = 410 bits (1054), Expect = e-113
Identities = 204/216 (94%), Positives = 211/216 (97%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGS TTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LADTDSK+EP T+KINQP+ GAG +Q +QKSACCGS
Sbjct: 181 LADTDSKAEPSTLKINQPEAGAGGSQTSQKSACCGS 216
>emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana] gi|21555222|gb|AAM63807.1|
GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis
thaliana] gi|30693873|ref|NP_850696.1| Ras-related
GTP-binding protein, putative [Arabidopsis thaliana]
gi|15231847|ref|NP_190929.1| Ras-related GTP-binding
protein, putative [Arabidopsis thaliana]
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|11274528|pir||T45901 GTPase AtRAB8 - Arabidopsis
thaliana
Length = 216
Score = 409 bits (1052), Expect = e-113
Identities = 204/216 (94%), Positives = 212/216 (97%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASD+
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDS 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LADTD+++EPQTIKINQ DQGAG +QA QKSACCG+
Sbjct: 181 LADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216
>dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein
ara-3 [Arabidopsis thaliana] gi|28393504|gb|AAO42173.1|
putative GTP-binding protein ara-3 [Arabidopsis
thaliana] gi|15238542|ref|NP_200792.1| Ras-related
GTP-binding family protein [Arabidopsis thaliana]
Length = 216
Score = 409 bits (1052), Expect = e-113
Identities = 206/216 (95%), Positives = 210/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LADTDS++EP TIKI+Q DQ AGA QA QKSACCGS
Sbjct: 181 LADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216
>emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein
ara-3 [Arabidopsis thaliana] gi|217837|dbj|BAA00830.1|
small GTP-binding protein [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3
[Arabidopsis thaliana] gi|25084212|gb|AAN72197.1|
GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein
ara-3 [Arabidopsis thaliana]
gi|15231322|ref|NP_190192.1| Ras-related protein (ARA-3)
/ small GTP-binding protein, putative [Arabidopsis
thaliana] gi|320560|pir||JS0640 GTP-binding protein
ara-3 [similarity] - Arabidopsis thaliana
gi|114088|sp|P28186|ARA3_ARATH Ras-related protein ARA-3
Length = 216
Score = 408 bits (1048), Expect = e-113
Identities = 204/216 (94%), Positives = 210/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEVFFSI RDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
L+DTDS++EP TIKI+Q DQ AGA QA QKSACCG+
Sbjct: 181 LSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216
>emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 408 bits (1048), Expect = e-113
Identities = 203/216 (93%), Positives = 211/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPAR RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIE+D
Sbjct: 1 MAAPPARPRADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFE SAKTN+NVEEVFFSIA+DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEEVFFSIAKDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LA+TDSK+EPQTIKINQ +QGAG + A+QKSACCGS
Sbjct: 181 LAETDSKTEPQTIKINQQEQGAGTSAASQKSACCGS 216
>emb|CAA90082.1| small GTP-binding protein [Pisum sativum] gi|1362067|pir||S57478
GTP-binding protein GTP13 - garden pea
Length = 215
Score = 405 bits (1040), Expect = e-112
Identities = 204/215 (94%), Positives = 207/215 (95%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA PARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAAPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215
LADTDS+SEPQTIKINQ D A QAA KSACCG
Sbjct: 181 LADTDSRSEPQTIKINQQDPAANGGQAATKSACCG 215
>dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2
[Nicotiana tabacum]
Length = 216
Score = 405 bits (1040), Expect = e-112
Identities = 202/216 (93%), Positives = 210/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
L+++DSK+EPQ I+INQ DQ + QAAQKS+CCGS
Sbjct: 181 LSESDSKTEPQAIRINQSDQAGTSGQAAQKSSCCGS 216
>emb|CAA90081.1| small GTP-binding protein [Pisum sativum] gi|1362065|pir||S57462
GTP-binding protein GTP11 - garden pea
Length = 215
Score = 402 bits (1034), Expect = e-111
Identities = 204/215 (94%), Positives = 206/215 (94%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA PARARAD DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAAPARARADSDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215
LADTDSKSEPQTIKINQ D A QAA KSACCG
Sbjct: 181 LADTDSKSEPQTIKINQQDPAANGGQAATKSACCG 215
>emb|CAA98174.1| RAB8C [Lotus corniculatus var. japonicus]
Length = 212
Score = 402 bits (1033), Expect = e-111
Identities = 206/216 (95%), Positives = 207/216 (95%), Gaps = 4/216 (1%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQER RTITTAYYRGA GILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERVRTITTAYYRGAKGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LADTDSK+EPQTIKINQPDQ A AAQ S CCGS
Sbjct: 181 LADTDSKAEPQTIKINQPDQPA----AAQNSTCCGS 212
>emb|CAA49600.1| GTP-binding protein [Lycopersicon esculentum] gi|479442|pir||S33900
GTP-binding protein ypt2 - tomato
Length = 216
Score = 402 bits (1032), Expect = e-111
Identities = 200/216 (92%), Positives = 209/216 (96%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGD+GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSI +DIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGKDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
L+++DSK+EPQ+I+INQ DQ A Q AQKS+CCGS
Sbjct: 181 LSESDSKTEPQSIRINQSDQAGTAGQGAQKSSCCGS 216
>emb|CAA98175.1| RAB8D [Lotus corniculatus var. japonicus]
Length = 214
Score = 400 bits (1029), Expect = e-110
Identities = 201/215 (93%), Positives = 208/215 (96%), Gaps = 1/215 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNW+RNIEQHASDN
Sbjct: 61 GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWLRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215
LADTD K+EP T+KINQ D AGA +AA KS+CCG
Sbjct: 181 LADTDHKAEPTTLKINQ-DSAAGAGEAANKSSCCG 214
>emb|CAA98172.1| RAB8A [Lotus corniculatus var. japonicus]
Length = 216
Score = 399 bits (1025), Expect = e-110
Identities = 202/214 (94%), Positives = 207/214 (96%), Gaps = 1/214 (0%)
Query: 3 APPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 62
AP ARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK
Sbjct: 4 APAARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGK 63
Query: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVN 122
RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNI+NWIRNIEQHASDNVN
Sbjct: 64 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVN 123
Query: 123 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 182
KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA
Sbjct: 124 KILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 183
Query: 183 DTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
DTDS++EPQTI+INQPD A QAAQKS CCGS
Sbjct: 184 DTDSRAEPQTIQINQPDASASGGQAAQKS-CCGS 216
>ref|XP_477215.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa (japonica cultivar-group)]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive
small GTP-binding protein [Oryza sativa (japonica
cultivar-group)] gi|33146687|dbj|BAC80082.1| putative
ethylene-responsive small GTP-binding protein [Oryza
sativa (japonica cultivar-group)]
Length = 215
Score = 397 bits (1021), Expect = e-110
Identities = 202/216 (93%), Positives = 208/216 (95%), Gaps = 1/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
LA+TDSK+E +TIKIN+P +G A QKSACCGS
Sbjct: 181 LAETDSKTEDRTIKINKP-EGDAEATTLQKSACCGS 215
>emb|CAA90079.1| small G protein [Pisum sativum] gi|1362064|pir||S57474 GTP-binding
protein - garden pea
Length = 215
Score = 395 bits (1015), Expect = e-109
Identities = 200/215 (93%), Positives = 203/215 (94%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAA PARARADYDYLIKLLLIGD VGKSCLLLRFSDGSFTTSFI TIGIDFKIRTIELD
Sbjct: 1 MAAAPARARADYDYLIKLLLIGDRRVGKSCLLLRFSDGSFTTSFIATIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GK IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNNIRNWIRNIEQHASDN
Sbjct: 61 GKPIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCG 215
LADTDS+SEPQTIKINQ D A QAA KSACCG
Sbjct: 181 LADTDSRSEPQTIKINQQDPAANGGQAATKSACCG 215
>emb|CAA98176.1| RAB8E [Lotus corniculatus var. japonicus]
Length = 215
Score = 395 bits (1014), Expect = e-109
Identities = 203/216 (93%), Positives = 208/216 (95%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI+NWI NIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
Query: 181 LADTD-SKSEPQTIKINQPDQGAGAAQAAQKSACCG 215
LADTD SK+EP IKIN D+G+ A +AAQKSACCG
Sbjct: 181 LADTDSSKTEPTGIKINPQDKGS-AGEAAQKSACCG 215
>ref|XP_470131.1| ethylene-responsive small GTP-binding protein [Oryza sativa
(japonica cultivar-group)] gi|29124128|gb|AAO65869.1|
ethylene-responsive small GTP-binding protein [Oryza
sativa (japonica cultivar-group)]
gi|46392555|gb|AAS91045.1| small GTP-binding protein
[Oryza sativa (japonica cultivar-group)]
Length = 214
Score = 393 bits (1010), Expect = e-108
Identities = 200/216 (92%), Positives = 206/216 (94%), Gaps = 2/216 (0%)
Query: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1 MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60
Query: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
Query: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQR
Sbjct: 121 VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR 180
Query: 181 LADTDSKSEPQTIKINQPDQGAGAAQAAQKSACCGS 216
L++TDSK E +TIKI +G A AAQKSACCGS
Sbjct: 181 LSETDSKPEDRTIKIK--SEGEAEAAAAQKSACCGS 214
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 331,226,586
Number of Sequences: 2540612
Number of extensions: 12263642
Number of successful extensions: 56092
Number of sequences better than 10.0: 5150
Number of HSP's better than 10.0 without gapping: 4193
Number of HSP's successfully gapped in prelim test: 957
Number of HSP's that attempted gapping in prelim test: 46051
Number of HSP's gapped (non-prelim): 5399
length of query: 216
length of database: 863,360,394
effective HSP length: 123
effective length of query: 93
effective length of database: 550,865,118
effective search space: 51230455974
effective search space used: 51230455974
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)
Medicago: description of AC125368.9