BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124967.9 - phase: 0
(122 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM67240.1| unknown [Arabidopsis thaliana] gi|18410081|ref|NP... 116 1e-25
ref|NP_197582.1| auxin-responsive protein-related [Arabidopsis t... 113 1e-24
gb|AAM63151.1| unknown [Arabidopsis thaliana] 110 6e-24
ref|XP_482720.1| auxin-induced protein-related-like protein [Ory... 110 1e-23
dbj|BAD36435.1| auxin-induced protein-like [Oryza sativa (japoni... 103 1e-21
dbj|BAC43474.1| unknown protein [Arabidopsis thaliana] gi|306852... 102 2e-21
gb|AAM61293.1| unknown [Arabidopsis thaliana] 61 7e-09
dbj|BAB02503.1| unnamed protein product [Arabidopsis thaliana] g... 61 7e-09
ref|XP_470303.1| hypothetical protein [Oryza sativa (japonica cu... 51 7e-06
dbj|BAC43220.1| unknown protein [Arabidopsis thaliana] gi|284168... 42 0.003
gb|AAC61809.1| hypothetical protein [Arabidopsis thaliana] gi|25... 42 0.003
ref|XP_479221.1| hypothetical protein [Oryza sativa (japonica cu... 42 0.003
dbj|BAD68470.1| putative auxin-induced protein TGSAUR22 [Oryza s... 42 0.003
dbj|BAB02427.1| auxin-regulated protein-like [Arabidopsis thalia... 39 0.038
emb|CAB80192.1| putative protein [Arabidopsis thaliana] gi|30969... 38 0.049
gb|AAR20762.1| At4g34750 [Arabidopsis thaliana] gi|41349926|gb|A... 38 0.064
emb|CAE05452.3| OSJNBa0073E02.12 [Oryza sativa (japonica cultiva... 37 0.084
gb|AAN65371.1| auxin-regulated protein [Phaseolus vulgaris] 36 0.24
ref|XP_646259.1| hypothetical protein DDB0190536 [Dictyostelium ... 35 0.55
emb|CAB86483.1| putative protein [Arabidopsis thaliana] gi|15229... 34 0.93
>gb|AAM67240.1| unknown [Arabidopsis thaliana] gi|18410081|ref|NP_565042.1|
auxin-responsive protein-related [Arabidopsis thaliana]
gi|12325266|gb|AAG52573.1| hypothetical protein;
47720-48079 [Arabidopsis thaliana]
gi|25406181|pir||D96748 hypothetical protein T10D10.10
[imported] - Arabidopsis thaliana
Length = 119
Score = 116 bits (290), Expect = 1e-25
Identities = 61/120 (50%), Positives = 82/120 (67%), Gaps = 3/120 (2%)
Query: 1 MAKGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVT 60
MAK GKL KLKSA+KKW SF K HS S+ A D S ++LH V+VG++RR Y +
Sbjct: 1 MAKVGKLTKLKSAMKKWPSFA--KNHHHSTSSAAVSDELSEDNNLHVVYVGQTRRPYMLR 58
Query: 61 SDVVDNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENADPQPESLDELVDFY 120
D++ +P+F+ELV+RS + D VVACEVVLFEHLLWML++ + S++EL +FY
Sbjct: 59 PDIISHPLFQELVDRSSSRSIEQDREIVVACEVVLFEHLLWMLKSGQ-EGGSVEELAEFY 117
>ref|NP_197582.1| auxin-responsive protein-related [Arabidopsis thaliana]
Length = 127
Score = 113 bits (282), Expect = 1e-24
Identities = 68/131 (51%), Positives = 88/131 (66%), Gaps = 13/131 (9%)
Query: 1 MAKGG-KLMKLKSALKKWNSFGNGK-----QSRHSISAVADEDSSSSRSDLHTVFVGKSR 54
MAKGG KLMKLKS LKK NSF Q+ HS S+ S+ DL TV+VG++R
Sbjct: 1 MAKGGNKLMKLKSVLKKLNSFNTKPNQPPAQTNHSRSSAV---SAFPSEDLQTVYVGRTR 57
Query: 55 RLYRVTSDVVDNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENAD---PQPE 111
R Y V+SDVV +P+F++L ++ +++V +CEVVLFEHLLWMLENAD +PE
Sbjct: 58 RTYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISV-SCEVVLFEHLLWMLENADADESRPE 116
Query: 112 SLDELVDFYAC 122
S+ ELV+FYAC
Sbjct: 117 SVYELVEFYAC 127
>gb|AAM63151.1| unknown [Arabidopsis thaliana]
Length = 127
Score = 110 bits (276), Expect = 6e-24
Identities = 67/131 (51%), Positives = 87/131 (66%), Gaps = 13/131 (9%)
Query: 1 MAKGG-KLMKLKSALKKWNSFGNGK-----QSRHSISAVADEDSSSSRSDLHTVFVGKSR 54
MAKGG KLMKLKS LKK NSF Q+ H S+ S+ DL TV+VG++R
Sbjct: 1 MAKGGNKLMKLKSVLKKLNSFNTKPNQPQAQTNHGRSSAV---SAFPSEDLQTVYVGRTR 57
Query: 55 RLYRVTSDVVDNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENAD---PQPE 111
R Y V+SDVV +P+F++L ++ +++V +CEVVLFEHLLWMLENAD +PE
Sbjct: 58 RPYHVSSDVVSHPLFQQLAAVDGGCGSEDGSISV-SCEVVLFEHLLWMLENADADESRPE 116
Query: 112 SLDELVDFYAC 122
S+ ELV+FYAC
Sbjct: 117 SVYELVEFYAC 127
>ref|XP_482720.1| auxin-induced protein-related-like protein [Oryza sativa (japonica
cultivar-group)] gi|51964936|ref|XP_507252.1| PREDICTED
OJ1117_F10.20 gene product [Oryza sativa (japonica
cultivar-group)] gi|42407659|dbj|BAD08791.1|
auxin-induced protein-related-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 133
Score = 110 bits (274), Expect = 1e-23
Identities = 61/134 (45%), Positives = 82/134 (60%), Gaps = 13/134 (9%)
Query: 1 MAKGGKLMKLKSALKKWNSFG-------NGKQSRHSISAVADEDSSSSRSD-----LHTV 48
M KGG L KL+ +++W+S + + +A A +S +D LH V
Sbjct: 1 MGKGGGLSKLRCMIRRWHSSSRIARAPPSAGELEEGSAAAAGRAASFHGADEVPKGLHPV 60
Query: 49 FVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWMLENADP 108
+VGKSRR Y + ++V +P+F+ LV+R+ VV CEVVLFEHLLWMLENADP
Sbjct: 61 YVGKSRRRYLIAEELVGHPLFQNLVDRTGGGGG-GGAATVVGCEVVLFEHLLWMLENADP 119
Query: 109 QPESLDELVDFYAC 122
QPESLDELV++YAC
Sbjct: 120 QPESLDELVEYYAC 133
>dbj|BAD36435.1| auxin-induced protein-like [Oryza sativa (japonica cultivar-group)]
Length = 165
Score = 103 bits (257), Expect = 1e-21
Identities = 69/168 (41%), Positives = 86/168 (51%), Gaps = 49/168 (29%)
Query: 1 MAKGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSD---------------- 44
MAKGG L KLK +K+W+S + + SR A S+S+RS
Sbjct: 1 MAKGG-LSKLKCMIKRWHS--SSRISRTPSGCSASAGSTSARSSHGGGRVGGEEWGRSVV 57
Query: 45 ----------------------------LHTVFVGKSRRLYRVTSDVVDNPVFRELVERS 76
LH V+VGKSRR Y + +D+V +P+F+ LV+RS
Sbjct: 58 ASGGGGGGGGGGRGGSVSFHGADGVPPGLHPVYVGKSRRRYLIAADLVGHPMFQNLVDRS 117
Query: 77 RE--TEQQNDTVNVVACEVVLFEHLLWMLENADPQPESLDELVDFYAC 122
VV CEVVLFEHLLWMLENADPQPESLDELV++YAC
Sbjct: 118 GGGGVGGGGGGGTVVGCEVVLFEHLLWMLENADPQPESLDELVEYYAC 165
>dbj|BAC43474.1| unknown protein [Arabidopsis thaliana] gi|30685273|ref|NP_849679.1|
auxin-responsive protein-related [Arabidopsis thaliana]
gi|25511720|pir||A86310 F28G4.20 protein - Arabidopsis
thaliana gi|9665126|gb|AAF97310.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 131
Score = 102 bits (254), Expect = 2e-21
Identities = 62/130 (47%), Positives = 84/130 (63%), Gaps = 11/130 (8%)
Query: 1 MAKGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVT 60
MA GKL KLKSA+KKW S S ++ A + S DLH V+VGKSRR Y ++
Sbjct: 1 MAIFGKLTKLKSAIKKWPSLTKNHHSTMCTASTAVSEVSKCE-DLHVVYVGKSRRPYMLS 59
Query: 61 SDVVDNPVFRELVER-SRETEQQNDTVNV-VACEVVLFEHLLWMLENA--------DPQP 110
S V+ +P+F+EL++R SR E+++D V VACEVVLFEHLLWML+N+ D +
Sbjct: 60 SHVIAHPLFQELLDRSSRFIEERHDQETVLVACEVVLFEHLLWMLKNSSSDHGDEDDRER 119
Query: 111 ESLDELVDFY 120
S++EL +FY
Sbjct: 120 GSVEELAEFY 129
>gb|AAM61293.1| unknown [Arabidopsis thaliana]
Length = 135
Score = 60.8 bits (146), Expect = 7e-09
Identities = 34/92 (36%), Positives = 52/92 (55%), Gaps = 6/92 (6%)
Query: 35 DEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDT----VNVVA 90
D D S + S TV VG++++ Y ++ + +P+ LVE+ + E+ ++ + V
Sbjct: 41 DVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVK 100
Query: 91 CEVVLFEHLLWMLENADPQP--ESLDELVDFY 120
CEVVLF+HLLWMLE D ESLD+ Y
Sbjct: 101 CEVVLFDHLLWMLEYGDQVHILESLDDFAHLY 132
>dbj|BAB02503.1| unnamed protein product [Arabidopsis thaliana]
gi|18399805|ref|NP_566440.1| auxin-responsive
protein-related [Arabidopsis thaliana]
Length = 139
Score = 60.8 bits (146), Expect = 7e-09
Identities = 34/92 (36%), Positives = 52/92 (55%), Gaps = 6/92 (6%)
Query: 35 DEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDT----VNVVA 90
D D S + S TV VG++++ Y ++ + +P+ LVE+ + E+ ++ + V
Sbjct: 45 DVDQSPTPSMYQTVLVGRTKKPYLISKKHLKHPLLNALVEKQQRYEEDDNEDGSCIITVK 104
Query: 91 CEVVLFEHLLWMLENADPQP--ESLDELVDFY 120
CEVVLF+HLLWMLE D ESLD+ Y
Sbjct: 105 CEVVLFDHLLWMLEYGDEVHILESLDDFAHLY 136
>ref|XP_470303.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|19071618|gb|AAL84285.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 119
Score = 50.8 bits (120), Expect = 7e-06
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 36 EDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDTVNVVACEVVL 95
+D S + TV VGK RR++ V V+D FR L+E + E+ + V + +L
Sbjct: 27 DDGPSPAAVTTTVVVGKERRVFSVDQLVLDTYPFRLLLETAVRKEESKAAL-FVDVDAIL 85
Query: 96 FEHLLWMLENADPQPES-----LDELVDFYA 121
FEH+LW+ + D S L E++DFY+
Sbjct: 86 FEHILWLAGHHDRSSSSLLHLDLKEIIDFYS 116
>dbj|BAC43220.1| unknown protein [Arabidopsis thaliana] gi|28416869|gb|AAO42965.1|
At2g35290 [Arabidopsis thaliana]
gi|30686373|ref|NP_181072.2| expressed protein
[Arabidopsis thaliana]
Length = 121
Score = 42.4 bits (98), Expect = 0.003
Identities = 29/81 (35%), Positives = 43/81 (52%), Gaps = 7/81 (8%)
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELV--ERSRETEQQNDTVNVV---ACEVVLFEHLLWM 102
V VGK ++ + V V++ FR L+ + R + N T VV + +LFEHLLW+
Sbjct: 38 VVVGKEKKEFMVEPYVLEEYPFRVLIGSAKDRAKNRLNRTGRVVWLDHVDSILFEHLLWL 97
Query: 103 LENADPQPESLD--ELVDFYA 121
L N LD E+++FYA
Sbjct: 98 LRNDASTFSDLDVLEIIEFYA 118
>gb|AAC61809.1| hypothetical protein [Arabidopsis thaliana] gi|25408366|pir||G84766
hypothetical protein At2g35290 [imported] - Arabidopsis
thaliana
Length = 91
Score = 42.4 bits (98), Expect = 0.003
Identities = 29/81 (35%), Positives = 43/81 (52%), Gaps = 7/81 (8%)
Query: 48 VFVGKSRRLYRVTSDVVDNPVFRELV--ERSRETEQQNDTVNVV---ACEVVLFEHLLWM 102
V VGK ++ + V V++ FR L+ + R + N T VV + +LFEHLLW+
Sbjct: 8 VVVGKEKKEFMVEPYVLEEYPFRVLIGSAKDRAKNRLNRTGRVVWLDHVDSILFEHLLWL 67
Query: 103 LENADPQPESLD--ELVDFYA 121
L N LD E+++FYA
Sbjct: 68 LRNDASTFSDLDVLEIIEFYA 88
>ref|XP_479221.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|22093792|dbj|BAC07083.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|24414097|dbj|BAC22344.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 205
Score = 42.0 bits (97), Expect = 0.003
Identities = 39/126 (30%), Positives = 58/126 (45%), Gaps = 25/126 (19%)
Query: 10 LKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKS---RRLYRVTSDVVD- 65
L+SA ++ + G G R DSSS+ D+ V VG + R ++ V V++
Sbjct: 78 LRSASRRGGAGGGGGYRRL--------DSSSAAGDVIRVEVGTTKGERSVFHVDQAVLEA 129
Query: 66 NPVFRELVERSRETEQQNDTVNVVACEVVLFEHLLWM----------LENADPQPESLDE 115
PV R L R T VA +V+LFEHLLW+ ++ + L E
Sbjct: 130 GPVRRLLAAAGRRTR---GGAVAVAVDVLLFEHLLWLQAAGDKGMLGYDDDESAAADLSE 186
Query: 116 LVDFYA 121
+VDFY+
Sbjct: 187 IVDFYS 192
>dbj|BAD68470.1| putative auxin-induced protein TGSAUR22 [Oryza sativa (japonica
cultivar-group)] gi|55296454|dbj|BAD68650.1| putative
auxin-induced protein TGSAUR22 [Oryza sativa (japonica
cultivar-group)]
Length = 119
Score = 42.0 bits (97), Expect = 0.003
Identities = 33/106 (31%), Positives = 51/106 (47%), Gaps = 9/106 (8%)
Query: 3 KGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSR-SDL----HTVFVGKSRRLY 57
K G LK LK+ +S G +Q + +S +E+ +S SD+ V+VG+ RR +
Sbjct: 4 KKGGAAGLKQILKRCSSLGRRQQEQKQVSEWEEEEEASGLPSDVPRGHFAVYVGERRRRF 63
Query: 58 RVTSDVVDNPVFRELVERSRE----TEQQNDTVNVVACEVVLFEHL 99
V ++D P FR L+ R+ E + V+ CE V F L
Sbjct: 64 VVPLALLDRPEFRSLLRRAEEEFGFAGAGAGGLLVLPCEEVAFRSL 109
>dbj|BAB02427.1| auxin-regulated protein-like [Arabidopsis thaliana]
gi|45773880|gb|AAS76744.1| At3g12830 [Arabidopsis
thaliana] gi|15230601|ref|NP_187889.1| auxin-responsive
family protein [Arabidopsis thaliana]
gi|44681346|gb|AAS47613.1| At3g12830 [Arabidopsis
thaliana]
Length = 132
Score = 38.5 bits (88), Expect = 0.038
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 27 RHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVDNPVFRELVERS-RETEQQNDT 85
R S++ + + +SS V+VG + V+++++++PVF L+ RS +E +
Sbjct: 36 RSSVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKG 95
Query: 86 VNVVACEVVLFEHLLWMLENADPQPESLDELV 117
V + C V++FE ++ L P P + +L+
Sbjct: 96 VLQIPCHVLVFERIMESLRLGLPVPIDVQDLI 127
>emb|CAB80192.1| putative protein [Arabidopsis thaliana] gi|3096944|emb|CAA18854.1|
putative protein [Arabidopsis thaliana]
gi|15236186|ref|NP_195201.1| auxin-responsive protein,
putative / small auxin up RNA (SAUR_E) [Arabidopsis
thaliana] gi|7487665|pir||T05295 hypothetical protein
T4L20.330 - Arabidopsis thaliana
Length = 150
Score = 38.1 bits (87), Expect = 0.049
Identities = 28/114 (24%), Positives = 55/114 (47%), Gaps = 14/114 (12%)
Query: 3 KGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSD 62
K G +++++ LK+W Q + I + ++ S V VG++RR Y V +
Sbjct: 6 KIGSVVRIRQMLKQW-------QKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAK 58
Query: 63 VVDNPVFRELVERSRETEQQNDTVNV----VACEVVLFEHLLWMLENADPQPES 112
+++P+FR L+ E E++ NV + C+ LFE ++ ++ + S
Sbjct: 59 HLNHPIFRRLL---AEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSS 109
>gb|AAR20762.1| At4g34750 [Arabidopsis thaliana] gi|41349926|gb|AAS00348.1|
At4g34750 [Arabidopsis thaliana]
Length = 150
Score = 37.7 bits (86), Expect = 0.064
Identities = 28/114 (24%), Positives = 55/114 (47%), Gaps = 14/114 (12%)
Query: 3 KGGKLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSD 62
K G +++++ LK+W Q + I + ++ S V VG++RR Y V +
Sbjct: 6 KIGSVVRIRRMLKQW-------QKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAK 58
Query: 63 VVDNPVFRELVERSRETEQQNDTVNV----VACEVVLFEHLLWMLENADPQPES 112
+++P+FR L+ E E++ NV + C+ LFE ++ ++ + S
Sbjct: 59 HLNHPIFRRLL---AEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSS 109
>emb|CAE05452.3| OSJNBa0073E02.12 [Oryza sativa (japonica cultivar-group)]
gi|50926486|ref|XP_473190.1| OSJNBa0073E02.12 [Oryza
sativa (japonica cultivar-group)]
Length = 129
Score = 37.4 bits (85), Expect = 0.084
Identities = 29/86 (33%), Positives = 43/86 (49%), Gaps = 8/86 (9%)
Query: 4 GGKLMKLKSALKKWNSFGNGKQSRHSIS---AVADEDSSSS-RSDL---HTV-FVGKSRR 55
G K L++ L W G + + A D D + SD+ HTV +VG+ R
Sbjct: 5 GSKRRLLRAFLHSWKKLGAAAAAAAPAAGEWAPLDGDGEGAIPSDVPRGHTVVYVGEELR 64
Query: 56 LYRVTSDVVDNPVFRELVERSRETEQ 81
Y V +D+P+FREL++R+RE Q
Sbjct: 65 RYVVRVSSLDHPLFRELLDRAREEYQ 90
>gb|AAN65371.1| auxin-regulated protein [Phaseolus vulgaris]
Length = 156
Score = 35.8 bits (81), Expect = 0.24
Identities = 30/131 (22%), Positives = 57/131 (42%), Gaps = 29/131 (22%)
Query: 6 KLMKLKSALKKWNSFGNGKQSRHSISAVA---------------------DEDSSSSRSD 44
++++LK +KW + G + + S VA DEDS S
Sbjct: 14 QIVRLKEMFQKWQTVTLGSKESNHDSDVARPGGIPPMINKRLTNVLYCDSDEDSCYSPQP 73
Query: 45 LH-------TVFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQQNDTVNV-VACEVVLF 96
H V+VG R + + + + + +F+ L+E++ E + + + + CE+ F
Sbjct: 74 PHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETF 133
Query: 97 EHLLWMLENAD 107
++LL +EN D
Sbjct: 134 KYLLNCMENHD 144
>ref|XP_646259.1| hypothetical protein DDB0190536 [Dictyostelium discoideum]
gi|60474294|gb|EAL72231.1| hypothetical protein
DDB0190536 [Dictyostelium discoideum]
Length = 824
Score = 34.7 bits (78), Expect = 0.55
Identities = 24/81 (29%), Positives = 35/81 (42%)
Query: 6 KLMKLKSALKKWNSFGNGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRVTSDVVD 65
KL KLKSA K F NGK S + + +E S S LHT L + ++
Sbjct: 424 KLDKLKSAANKLICFTNGKGSAREVEEILEEFSLSEMDALHTFIDMFGSDLVEYSLNLPS 483
Query: 66 NPVFRELVERSRETEQQNDTV 86
+ + V E E++ T+
Sbjct: 484 EGKYMDAVYEYLENEKERRTM 504
>emb|CAB86483.1| putative protein [Arabidopsis thaliana]
gi|15229222|ref|NP_189898.1| auxin-responsive
protein-related [Arabidopsis thaliana]
gi|11357851|pir||T47370 hypothetical protein F7M19.130 -
Arabidopsis thaliana
Length = 160
Score = 33.9 bits (76), Expect = 0.93
Identities = 33/144 (22%), Positives = 65/144 (44%), Gaps = 31/144 (21%)
Query: 6 KLMKLKSALKKWNSFGNGKQS--------RHS--ISAVADE---DSSSSRSDLHT----- 47
++++LK L+KW + G +S +H+ IS V ++ D + SD T
Sbjct: 14 QIVRLKEILQKWQTVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCDSDEETTCQSP 73
Query: 48 ------------VFVGKSRRLYRVTSDVVDNPVFRELVERSRETEQ-QNDTVNVVACEVV 94
V+VG R + + ++ + + +F+ L+E++ E + + CEV
Sbjct: 74 EPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVE 133
Query: 95 LFEHLLWMLENADPQPESLDELVD 118
F++LL +EN S ++ V+
Sbjct: 134 TFKYLLKCIENHPKDDTSAEDPVE 157
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.130 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,059,957
Number of Sequences: 2540612
Number of extensions: 6931994
Number of successful extensions: 18198
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 18164
Number of HSP's gapped (non-prelim): 52
length of query: 122
length of database: 863,360,394
effective HSP length: 98
effective length of query: 24
effective length of database: 614,380,418
effective search space: 14745130032
effective search space used: 14745130032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC124967.9