BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124967.5 + phase: 0 /pseudo
(233 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_470556.1| Unknown protein [Oryza sativa] gi|15217293|gb|A... 308 1e-82
emb|CAB80042.1| putative protein [Arabidopsis thaliana] gi|44902... 298 6e-80
dbj|BAD93923.1| hypothetical protein [Arabidopsis thaliana] 143 4e-33
gb|AAF46753.1| CG10306-PA [Drosophila melanogaster] gi|19922704|... 111 2e-23
gb|EAL24946.1| GA10234-PA [Drosophila pseudoobscura] 108 9e-23
gb|EAL24945.1| GA15733-PA [Drosophila pseudoobscura] 108 9e-23
emb|CAF95696.1| unnamed protein product [Tetraodon nigroviridis] 107 2e-22
ref|XP_533679.1| PREDICTED: similar to RIKEN cDNA 1200009C21 [Ca... 105 8e-22
gb|AAH91749.1| Eukaryotic translation initiation factor 3, subun... 105 1e-21
gb|AAP22070.1| eukaryotic translation initiation factor 3 subuni... 105 1e-21
ref|XP_214886.1| PREDICTED: similar to RIKEN cDNA 1200009C21 [Ra... 105 1e-21
gb|AAD40193.1| HSPC029 [Homo sapiens] 105 1e-21
ref|NP_001017583.1| hypothetical protein LOC550245 [Danio rerio]... 104 2e-21
pdb|1RZ4|A Chain A, Crystal Structure Of Human Eif3k 103 3e-21
ref|XP_512639.1| PREDICTED: similar to eukaryotic translation in... 102 7e-21
gb|AAH73526.1| MGC82783 protein [Xenopus laevis] 99 1e-19
gb|AAH89069.1| LOC548352 protein [Xenopus tropicalis] 99 1e-19
gb|AAR09739.1| similar to Drosophila melanogaster CG10306 [Droso... 98 2e-19
ref|XP_624345.1| PREDICTED: similar to eukaryotic translation in... 94 3e-18
gb|AAM19805.1| AT4g33250/F17M5_10 [Arabidopsis thaliana] 88 2e-16
>ref|XP_470556.1| Unknown protein [Oryza sativa] gi|15217293|gb|AAK92637.1| Unknown
protein [Oryza sativa] gi|23396617|sp|Q94HF1|IF3C_ORYSA
Eukaryotic translation initiation factor 3 subunit 12
(eIF-3 p25) (eIF3k)
Length = 226
Score = 308 bits (788), Expect = 1e-82
Identities = 158/222 (71%), Positives = 183/222 (82%), Gaps = 2/222 (0%)
Query: 13 QGGTAYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQ 72
Q +YTVE+LVA N YNPDIL DLE +VNDQVS+QTY+L++NL LLRLYQFE E++S Q
Sbjct: 5 QAAESYTVEELVAVNPYNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPERLSVQ 64
Query: 73 IVARILVKALMAMPAPDFSLCLFLIPERVIANGRSSSRH*L-FCLTI*RFRQFWDEASKS 131
IV+RIL+KALMAMP PDFSLCLFLIPE V + + L L RFRQFWDEASK+
Sbjct: 65 IVSRILIKALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWDEASKN 124
Query: 132 RHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVI 191
R+I++ VPGFEQAIQ YAIHVLSLTYQK+PR VLAEAIN+EGL+LDKFLEH + NSGWVI
Sbjct: 125 RNILDVVPGFEQAIQSYAIHVLSLTYQKVPRPVLAEAINIEGLALDKFLEHHIANSGWVI 184
Query: 192 EKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIFPIL 233
EK + QLIVLPRNEFN P LKKNTA++VP EHVTRIFP+L
Sbjct: 185 EKG-ARSQLIVLPRNEFNHPELKKNTAETVPFEHVTRIFPVL 225
>emb|CAB80042.1| putative protein [Arabidopsis thaliana] gi|4490292|emb|CAB38783.1|
putative protein [Arabidopsis thaliana]
gi|20258863|gb|AAM14103.1| unknown protein [Arabidopsis
thaliana] gi|15292989|gb|AAK93605.1| unknown protein
[Arabidopsis thaliana] gi|20147105|gb|AAM10269.1|
AT4g33250/F17M5_10 [Arabidopsis thaliana]
gi|15234123|ref|NP_195051.1| eukaryotic translation
initiation factor 3 subunit 11 / eIF-3 p25 / eIF3k
(TIF3K1) [Arabidopsis thaliana]
gi|14335024|gb|AAK59776.1| AT4g33250/F17M5_10
[Arabidopsis thaliana] gi|23396627|sp|Q9SZA3|IF3C_ARATH
Eukaryotic translation initiation factor 3 subunit 12
(eIF-3 p25) (eIF3k) gi|12407753|gb|AAG53637.1|
initiation factor 3k [Arabidopsis thaliana]
Length = 226
Score = 298 bits (764), Expect = 6e-80
Identities = 155/222 (69%), Positives = 182/222 (81%), Gaps = 6/222 (2%)
Query: 13 QGGTAYTVEQLVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQ 72
Q ++YTVEQLVA N +NP+ILPDLENYVN V+SQTYSLE NLCLLRLYQFE E+M++
Sbjct: 9 QEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQFEPERMNTH 66
Query: 73 IVARILVKALMAMPAPDFSLCLFLIPERVIANGRSSSRH*L-FCLTI*RFRQFWDEASKS 131
IVARILVKALMAMP PDFSLCLFLIPERV + S L L RF+QFWDEA+K+
Sbjct: 67 IVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQQFWDEAAKN 126
Query: 132 RHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVI 191
RHI+EAVPGFEQAIQ YA H+LSL+YQK+PR+VLAEA+N++G SLDKF+E QV NSGW++
Sbjct: 127 RHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQQVTNSGWIV 186
Query: 192 EKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIFPIL 233
EK G IVLP+NEFN P LKKNT ++VPLEH+ RIFPIL
Sbjct: 187 EKEGGS---IVLPQNEFNHPELKKNTGENVPLEHIARIFPIL 225
>dbj|BAD93923.1| hypothetical protein [Arabidopsis thaliana]
Length = 95
Score = 143 bits (360), Expect = 4e-33
Identities = 68/97 (70%), Positives = 82/97 (84%), Gaps = 3/97 (3%)
Query: 137 AVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQG 196
AVPGFEQAIQ YA H+LSL+YQK+PR+VLAEA+N++G SLDKF+E QV NSGW++EK G
Sbjct: 1 AVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQQVTNSGWIVEKEGG 60
Query: 197 KGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIFPIL 233
IVLP+NEFN P LKKNT ++VPLEH+ RIFPIL
Sbjct: 61 S---IVLPQNEFNHPELKKNTGENVPLEHIARIFPIL 94
>gb|AAF46753.1| CG10306-PA [Drosophila melanogaster] gi|19922704|ref|NP_611604.1|
CG10306-PA [Drosophila melanogaster]
gi|16768794|gb|AAL28616.1| LD03569p [Drosophila
melanogaster] gi|23396629|sp|Q9W2D9|IF3C_DROME Probable
eukaryotic translation initiation factor 3 subunit 12
(eIF-3 p25) (eIF3k)
Length = 222
Score = 111 bits (277), Expect = 2e-23
Identities = 71/219 (32%), Positives = 119/219 (53%), Gaps = 13/219 (5%)
Query: 11 KGQGGTAYTVEQLVA-FNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKM 69
K + G + T+++++ RYNPD L LE+YV DQ + TY LE+NL +L+LYQF +
Sbjct: 6 KMENGQSQTIQEMLGCIERYNPDHLKTLESYVQDQAKNNTYDLEANLAVLKLYQFNPHML 65
Query: 70 SSQIVARILVKALMAMPAPDFSL--CLFLIPERVIANGRSSSRH*LFCLTI*RFRQFWDE 127
+ I IL+K+L ++P DF + CL L+P+++ + L F FW
Sbjct: 66 NFDITYTILLKSLTSLPHTDFVMAKCL-LLPQQMKDENVQTIIDLADILERADFTLFWQR 124
Query: 128 ASKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENS 187
A +R++ + GF +I+ + HV+ T+Q I + +L E + G D LE ++ +
Sbjct: 125 AEVNRNMFRHITGFHDSIRKFVSHVVGTTFQTIRKDLLKELL---GGIEDSTLESWIKRN 181
Query: 188 GWVIEKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHV 226
GW K+QG+G +IV + +D I KN + + ++V
Sbjct: 182 GW---KNQGQGLVIVAMQ---DDKIKTKNITEKIEFDNV 214
>gb|EAL24946.1| GA10234-PA [Drosophila pseudoobscura]
Length = 222
Score = 108 bits (271), Expect = 9e-23
Identities = 70/219 (31%), Positives = 117/219 (52%), Gaps = 13/219 (5%)
Query: 11 KGQGGTAYTVEQLVA-FNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKM 69
K + G + T+++++ RYNPD L LE Y+ DQ + TY LE+NL +L+LYQF +
Sbjct: 6 KMENGQSQTIQEMLGCIERYNPDHLKTLEAYIQDQAKNNTYDLEANLAVLKLYQFNPHML 65
Query: 70 SSQIVARILVKALMAMPAPDFSL--CLFLIPERVIANGRSSSRH*LFCLTI*RFRQFWDE 127
+ +I IL+K+L +P DF + CL L+P+++ + L F FW
Sbjct: 66 NFEITYTILLKSLTNLPHTDFVMAKCL-LLPQQMKDENIQTIIDLADILERADFTLFWQR 124
Query: 128 ASKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENS 187
A +R + + GF +I+ + HV+S+T+Q I + +L E + G D LE ++ +
Sbjct: 125 AEVNRTMFRHISGFHDSIRKFVSHVVSITFQTIKKDLLKELL---GGIEDSTLESWIKRN 181
Query: 188 GWVIEKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHV 226
GW K QG+ ++V + +D I KN + + E+V
Sbjct: 182 GW---KHQGQDLIVVAMQ---DDKIKTKNITEKIEFENV 214
>gb|EAL24945.1| GA15733-PA [Drosophila pseudoobscura]
Length = 2074
Score = 108 bits (271), Expect = 9e-23
Identities = 70/219 (31%), Positives = 117/219 (52%), Gaps = 13/219 (5%)
Query: 11 KGQGGTAYTVEQLVA-FNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKM 69
K + G + T+++++ RYNPD L LE Y+ DQ + TY LE+NL +L+LYQF +
Sbjct: 1858 KMENGQSQTIQEMLGCIERYNPDHLKTLEAYIQDQAKNNTYDLEANLAVLKLYQFNPHML 1917
Query: 70 SSQIVARILVKALMAMPAPDFSL--CLFLIPERVIANGRSSSRH*LFCLTI*RFRQFWDE 127
+ +I IL+K+L +P DF + CL L+P+++ + L F FW
Sbjct: 1918 NFEITYTILLKSLTNLPHTDFVMAKCL-LLPQQMKDENIQTIIDLADILERADFTLFWQR 1976
Query: 128 ASKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENS 187
A +R + + GF +I+ + HV+S+T+Q I + +L E + G D LE ++ +
Sbjct: 1977 AEVNRTMFRHISGFHDSIRKFVSHVVSITFQTIKKDLLKELL---GGIEDSTLESWIKRN 2033
Query: 188 GWVIEKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHV 226
GW K QG+ ++V + +D I KN + + E+V
Sbjct: 2034 GW---KHQGQDLIVVAMQ---DDKIKTKNITEKIEFENV 2066
>emb|CAF95696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 107 bits (268), Expect = 2e-22
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + ++IL+KAL
Sbjct: 15 LRGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPPYFQTAVTSQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++R +++ +
Sbjct: 75 TNLPHTDFTLCKCMIDQ--THQEERPIRQILYLGNLLETCHFQSFWTNLEENRELIDGIA 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G LD ++ + GW +GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQTIGRCLLAEML---GDPLDTQVKLWMNKHGWT---ENEEGQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + E V+ I
Sbjct: 187 IFIFNQEESIKP---KNIVEKIDFESVSSI 213
>ref|XP_533679.1| PREDICTED: similar to RIKEN cDNA 1200009C21 [Canis familiaris]
gi|61881975|ref|XP_613835.1| PREDICTED: similar to
eukaryotic translation initiation factor 3, subunit 12
[Bos taurus] gi|61821421|ref|XP_593327.1| PREDICTED:
similar to eukaryotic translation initiation factor 3,
subunit 12 [Bos taurus]
Length = 218
Score = 105 bits (263), Expect = 8e-22
Identities = 67/210 (31%), Positives = 106/210 (49%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ ++E +
Sbjct: 75 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L+ + GW ++S GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDSQLKVWMSKYGWSADES---GQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + + V+ I
Sbjct: 187 IFICSQEESIKP---KNIVEKIDFDSVSSI 213
>gb|AAH91749.1| Eukaryotic translation initiation factor 3, subunit 12 [Mus
musculus] gi|23396620|sp|Q9DBZ5|IF3C_MOUSE Eukaryotic
translation initiation factor 3 subunit 12 (eIF-3 p25)
(eIF3k) gi|21312044|ref|NP_082935.1| eukaryotic
translation initiation factor 3, subunit 12 [Mus
musculus] gi|12835998|dbj|BAB23454.1| unnamed protein
product [Mus musculus]
Length = 218
Score = 105 bits (262), Expect = 1e-21
Identities = 67/210 (31%), Positives = 106/210 (49%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ ++E +
Sbjct: 75 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L+ + GW ++S GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDNQLKVWMSKYGWSADES---GQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + + V+ I
Sbjct: 187 VFICSQEESIKP---KNIVEKIDFDSVSSI 213
>gb|AAP22070.1| eukaryotic translation initiation factor 3 subunit k; eIF3k [Homo
sapiens] gi|33337733|gb|AAQ13503.1| MSTP001 [Homo
sapiens] gi|4689150|gb|AAD27784.1| PTD001 [Homo sapiens]
gi|10801345|ref|NP_037366.1| eukaryotic translation
initiation factor 3, subunit 12 [Homo sapiens]
gi|23396628|sp|Q9UBQ5|IF3C_HUMAN Eukaryotic translation
initiation factor 3 subunit 12 (eIF-3 p25) (eIF3k)
(Muscle specific gene M9 protein) (ARG134)
gi|12667260|gb|AAK01365.1| ARG134 protein [Homo sapiens]
gi|4587123|dbj|BAA76626.1| muscle specific gene M9 [Homo
sapiens] gi|12654411|gb|AAH01031.1| Eukaryotic
translation initiation factor 3, subunit 12 [Homo
sapiens] gi|14043143|gb|AAH07559.1| Eukaryotic
translation initiation factor 3, subunit 12 [Homo
sapiens]
Length = 218
Score = 105 bits (262), Expect = 1e-21
Identities = 67/210 (31%), Positives = 106/210 (49%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ ++E +
Sbjct: 75 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L+ + GW ++S GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGWSADES---GQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + + V+ I
Sbjct: 187 IFICSQEESIKP---KNIVEKIDFDSVSSI 213
>ref|XP_214886.1| PREDICTED: similar to RIKEN cDNA 1200009C21 [Rattus norvegicus]
Length = 218
Score = 105 bits (261), Expect = 1e-21
Identities = 67/210 (31%), Positives = 105/210 (49%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ ++E +
Sbjct: 75 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L + GW ++S GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDNQLRVWMSKYGWSADES---GQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + + V+ I
Sbjct: 187 VFICSQEESIKP---KNIVEKIDFDSVSSI 213
>gb|AAD40193.1| HSPC029 [Homo sapiens]
Length = 218
Score = 105 bits (261), Expect = 1e-21
Identities = 67/210 (31%), Positives = 106/210 (49%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ ++E +
Sbjct: 75 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQAFWKALDENMDLLEGIT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L+ + GW ++S GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGWSADES---GQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + + V+ I
Sbjct: 187 IFICSQEESIKP---KNIVEKIDFDSVSSI 213
>ref|NP_001017583.1| hypothetical protein LOC550245 [Danio rerio]
gi|62202422|gb|AAH93002.1| Hypothetical protein
LOC550245 [Danio rerio]
Length = 219
Score = 104 bits (260), Expect = 2e-21
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV+ Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 16 LRGIDRYNPENLATLERYVDTQARENAYDLEANLAVLKLYQFNLAYFQTTVTAQILLKAL 75
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++R +++ +
Sbjct: 76 TNLPHTDFTLCKCMIDQ--THQEERPIRQILYLGNLLETCHFQSFWASLEENRDLIDGIT 133
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE++++ + HV+ +TYQ I +LAE + G LD ++ + GW + GQ
Sbjct: 134 GFEESVRKFICHVVGITYQNIEYRLLAEML---GDPLDTQVKVWMNKYGWTENED---GQ 187
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + E V+ I
Sbjct: 188 IFIHNQEESVKP---KNIVEKIDFESVSSI 214
>pdb|1RZ4|A Chain A, Crystal Structure Of Human Eif3k
Length = 226
Score = 103 bits (258), Expect = 3e-21
Identities = 67/210 (31%), Positives = 104/210 (48%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 15 LKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC I + R L+ L F+ FW ++ ++E +
Sbjct: 75 TNLPHTDFTLCKCXIDQ--AHQEERPIRQILYLGDLLETCHFQAFWQALDENXDLLEGIT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L+ GW ++S GQ
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEXL---GDLSDSQLKVWXSKYGWSADES---GQ 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
+ + + E P KN + + + V+ I
Sbjct: 187 IFICSQEESIKP---KNIVEKIDFDSVSSI 213
>ref|XP_512639.1| PREDICTED: similar to eukaryotic translation initiation factor 3
subunit k; muscle specific gene [Pan troglodytes]
Length = 347
Score = 102 bits (255), Expect = 7e-21
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q + Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 151 LKGIDRYNPENLATLERYVETQAKEKCYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 210
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ ++E +
Sbjct: 211 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQAFWQALDENMDLLEGIT 268
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G D L+ + GW ++S GQ
Sbjct: 269 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGWSADES---GQ 322
Query: 200 LIVLPRNEFNDP--ILKKNTADS 220
+ + + E P I++K DS
Sbjct: 323 IFICSQEESIKPKNIVEKIDFDS 345
>gb|AAH73526.1| MGC82783 protein [Xenopus laevis]
Length = 218
Score = 99.0 bits (245), Expect = 1e-19
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A++L+KAL
Sbjct: 15 LRGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQVLLKAL 74
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ +++ V
Sbjct: 75 TNLPHTDFTLCKCMIDQ--AHQEDRPIRQILYLGDLLETCHFQSFWQALDENLDLIDGVT 132
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G + L + GW IE GK
Sbjct: 133 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSEPQLRVWMSKYGW-IESENGK-- 186
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
I + E N I KN + + + V+ I
Sbjct: 187 -IFVCNQEEN--IKPKNIVEKIDFDSVSGI 213
>gb|AAH89069.1| LOC548352 protein [Xenopus tropicalis]
Length = 217
Score = 98.6 bits (244), Expect = 1e-19
Identities = 67/210 (31%), Positives = 104/210 (48%), Gaps = 14/210 (6%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L +RYNP+ L LE YV Q Y LE+NL +L+LYQF + + A+IL+KAL
Sbjct: 14 LRGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTTVTAQILLKAL 73
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*LF---CLTI*RFRQFWDEASKSRHIVEAVP 139
+P DF+LC +I + R L+ L F+ FW ++ +++ +
Sbjct: 74 TNLPHTDFTLCKCMIDQ--AHQEERPIRQILYLGDLLETCHFQSFWQALDENLDLIDGIT 131
Query: 140 GFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENSGWVIEKSQGKGQ 199
GFE +++ + HV+ +TYQ I R +LAE + G + L + GW +E GK
Sbjct: 132 GFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSEPQLRVWMSKYGW-MESENGK-- 185
Query: 200 LIVLPRNEFNDPILKKNTADSVPLEHVTRI 229
I + E N I KN + + + V+ I
Sbjct: 186 -IFVCNQEEN--IKPKNIVEKIDFDSVSGI 212
>gb|AAR09739.1| similar to Drosophila melanogaster CG10306 [Drosophila yakuba]
Length = 185
Score = 98.2 bits (243), Expect = 2e-19
Identities = 60/182 (32%), Positives = 97/182 (52%), Gaps = 7/182 (3%)
Query: 11 KGQGGTAYTVEQLVA-FNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKM 69
K + G + T+++++ RYNPD L LE YV DQ + TY LE+NL +L+LYQF +
Sbjct: 6 KMENGQSQTIQEMLGCIERYNPDHLKTLEAYVQDQAKNNTYDLEANLAVLKLYQFNPHML 65
Query: 70 SSQIVARILVKALMAMPAPDFSL--CLFLIPERVIANGRSSSRH*LFCLTI*RFRQFWDE 127
+ I IL+K+L ++P DF + CL L+P+++ + L F FW
Sbjct: 66 NFDITYTILLKSLTSLPHTDFVMAKCL-LLPQQMKDENVQTIIDLADILERADFTLFWQR 124
Query: 128 ASKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEGLSLDKFLEHQVENS 187
A +R + + GF +I+ + HV+ T+Q I + +L E + G D LE ++ +
Sbjct: 125 AEVNRSMFRHIAGFHDSIRKFVSHVVGTTFQTIRKDLLKELL---GGIEDSTLESWIKRN 181
Query: 188 GW 189
GW
Sbjct: 182 GW 183
>ref|XP_624345.1| PREDICTED: similar to eukaryotic translation initiation factor 3,
subunit 12, partial [Apis mellifera]
Length = 171
Score = 94.0 bits (232), Expect = 3e-18
Identities = 51/148 (34%), Positives = 79/148 (52%), Gaps = 1/148 (0%)
Query: 23 LVAFNRYNPDILPDLENYVNDQVSSQTYSLESNLCLLRLYQFESEKMSSQIVARILVKAL 82
L RYNPD L LE YV Q Y LE+NL +L+LYQ + + I +IL+KAL
Sbjct: 13 LKGIERYNPDHLATLEKYVEIQSRENAYDLEANLAVLKLYQLNPHRFNMDITCQILLKAL 72
Query: 83 MAMPAPDFSLCLFLIPERVIANGRSSSRH*L-FCLTI*RFRQFWDEASKSRHIVEAVPGF 141
+P DF LC L+ ER++ + L L F+ FWD + + + GF
Sbjct: 73 TNLPHTDFVLCKCLLSERIMQESPINQIMYLGDILEQCDFQHFWDRVLSMSDLCDRIVGF 132
Query: 142 EQAIQGYAIHVLSLTYQKIPRTVLAEAI 169
+ +I+ + HV+ +T+Q I +++LA+ +
Sbjct: 133 QDSIRKFVCHVVGITFQTIDKSLLAQLL 160
>gb|AAM19805.1| AT4g33250/F17M5_10 [Arabidopsis thaliana]
Length = 61
Score = 87.8 bits (216), Expect = 2e-16
Identities = 41/63 (65%), Positives = 50/63 (79%), Gaps = 3/63 (4%)
Query: 171 VEGLSLDKFLEHQVENSGWVIEKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIF 230
++G SLDKF+E QV NSGW++EK G IVLP+NEFN P LKKNT ++VPLEH+ RIF
Sbjct: 1 MDGASLDKFIEQQVTNSGWIVEKEGGS---IVLPQNEFNHPELKKNTGENVPLEHIARIF 57
Query: 231 PIL 233
PIL
Sbjct: 58 PIL 60
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.139 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 365,779,651
Number of Sequences: 2540612
Number of extensions: 13615831
Number of successful extensions: 41951
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 41876
Number of HSP's gapped (non-prelim): 50
length of query: 233
length of database: 863,360,394
effective HSP length: 124
effective length of query: 109
effective length of database: 548,324,506
effective search space: 59767371154
effective search space used: 59767371154
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 73 (32.7 bits)
Medicago: description of AC124967.5