BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124963.24 - phase: 0
(556 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA70734.1| RING-finger protein [Lotus corniculatus var. jap... 861 0.0
dbj|BAA74802.1| DNA binding zinc finger protein (Pspzf) [Pisum s... 841 0.0
emb|CAA85320.1| C-terminal zinc-finger [Glycine max] gi|1076498|... 540 e-152
gb|AAM20304.1| putative protein with C-terminal RING finger [Ara... 390 e-107
gb|AAD18144.1| putative protein with C-terminal RING finger [Ara... 287 7e-76
ref|XP_475646.1| unknown protein [Oryza sativa (japonica cultiva... 169 3e-40
ref|XP_493762.1| putative C-terminal zinc-finger [Oryza sativa (... 168 4e-40
gb|AAD17397.1| putative RING zinc finger protein [Arabidopsis th... 137 7e-31
gb|AAV85696.1| At4g34040 [Arabidopsis thaliana] gi|7270353|emb|C... 136 2e-30
dbj|BAB09196.1| unnamed protein product [Arabidopsis thaliana] g... 133 1e-29
ref|NP_175132.1| zinc finger (C3HC4-type RING finger) family pro... 132 2e-29
dbj|BAD38048.1| putative RING-H2 finger protein RHG1a [Oryza sat... 130 1e-28
gb|AAC69857.1| RING-H2 finger protein RHG1a [Arabidopsis thalian... 129 2e-28
ref|XP_474118.1| OSJNBa0010D21.9 [Oryza sativa (japonica cultiva... 128 5e-28
gb|AAT77400.1| unknown protein [Oryza sativa (japonica cultivar-... 128 5e-28
emb|CAC08239.1| Pspzf zinc finger protein-like [Arabidopsis thal... 127 1e-27
gb|AAU95454.1| At5g10650 [Arabidopsis thaliana] gi|22326712|ref|... 127 1e-27
gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] g... 127 1e-27
gb|AAM20531.1| Pspzf zinc finger protein-like [Arabidopsis thali... 127 1e-27
emb|CAE02518.2| OSJNBb0003A12.5 [Oryza sativa (japonica cultivar... 125 5e-27
>emb|CAA70734.1| RING-finger protein [Lotus corniculatus var. japonicus]
gi|558545|emb|CAA85321.1| protein containing C-terminal
RING-finger [Lotus corniculatus var. japonicus]
gi|1086225|pir||S49446 RING-finger protein - Lotus
japonicus
Length = 549
Score = 861 bits (2225), Expect = 0.0
Identities = 422/557 (75%), Positives = 473/557 (84%), Gaps = 9/557 (1%)
Query: 1 MGHRHLFNASPMFEGEADPNWNNMLTDQHHVNHGGTSSSENGSFIYPVENMSIDNIYFPS 60
MGHRHL+N +P+FEGE D NWN+M TDQH+VN G TS++ENGS+ YPVEN+SID+ FPS
Sbjct: 1 MGHRHLYNTTPLFEGEPDQNWNHMHTDQHYVNLGRTSTAENGSYFYPVENVSIDSTSFPS 60
Query: 61 HWNANTRSNGYASSGPNIEVPPPHQLDTSGTSTNDHFMHSSSAGPFFAVSENFVHQPSSS 120
HWN TRSNGYASS NIEVPP HQ DTSG S NDHF+HSSSAG FFAVS N V QP ++
Sbjct: 61 HWNPATRSNGYASSSLNIEVPP-HQSDTSGAS-NDHFIHSSSAGAFFAVSNNCVPQPPAA 118
Query: 121 NYDRQAFHVDSGFIDLTMGSGRAHHKRKSPGIPSVYERGSSSGYFNAGTSSDLPIPPESW 180
NYDR F VD GFIDLTMGSGR HKRKSPGIPSVYERG SS YFNAG+S+D+PI ES
Sbjct: 119 NYDRPPFQVDGGFIDLTMGSGRGPHKRKSPGIPSVYERGGSSRYFNAGSSTDVPISSESR 178
Query: 181 PEKPNMDPQYMPWDHAAMAPTFRGAGLSMKGESSVRNVRSRSSLDLESNLCRTHLSSSHS 240
PEKPN+D QYMPWDH M T RGAG S+KGESS+RNVRSRS+LDLESNL RTHL S+HS
Sbjct: 179 PEKPNIDSQYMPWDHVPMTSTVRGAGHSIKGESSLRNVRSRSALDLESNLSRTHLPSNHS 238
Query: 241 HNSYPTVPPVSHSSLADLS-QVSTSLTRDWSQMNVTPANGRVLLPDASTFGLETSHFPVG 299
HNSY T+PPV HSS+ DLS Q+STSLT DWSQMN++PANGRVLLPDA +GLE+SHF G
Sbjct: 239 HNSYSTIPPVDHSSMMDLSGQISTSLTGDWSQMNISPANGRVLLPDAGAYGLESSHFLAG 298
Query: 300 NAAAAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASS 359
+ A ASNA+VDVGSFHH+FGTSRNPT QSF NLTQTARG RSNYSQRS P +RASS
Sbjct: 299 ---SGATASNASVDVGSFHHEFGTSRNPTGPQSFHNLTQTARGIRSNYSQRSAPTFRASS 355
Query: 360 SLRLGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALH 419
S LG TP D+GLPMVAE Y SRH RPL+++GWRNSDRNGR+RISSERYRSLA++A LH
Sbjct: 356 STHLGHVTPLDDGLPMVAESYSSRHQRPLSSIGWRNSDRNGRARISSERYRSLANEAGLH 415
Query: 420 ARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSE 479
R+S FMIV+RAS+YGSRN+LDQHR+MRMDIDNMSYEELLALGERIG VNTGLSE
Sbjct: 416 GRISPEV---FMIVDRASMYGSRNMLDQHRDMRMDIDNMSYEELLALGERIGHVNTGLSE 472
Query: 480 DVLSKCVTETIYCSSDQCQDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKK 539
D S+C+TETIYCSS+Q QDEGSCVICLEEYKNMDDVGTLKTCGHDYHV+CIKKWLSMKK
Sbjct: 473 DSFSQCMTETIYCSSEQGQDEGSCVICLEEYKNMDDVGTLKTCGHDYHVNCIKKWLSMKK 532
Query: 540 LCPICKSSALPEDKKDK 556
LCPICK+S +PEDK +K
Sbjct: 533 LCPICKASVMPEDKMNK 549
>dbj|BAA74802.1| DNA binding zinc finger protein (Pspzf) [Pisum sativum]
Length = 472
Score = 841 bits (2173), Expect = 0.0
Identities = 416/476 (87%), Positives = 436/476 (91%), Gaps = 6/476 (1%)
Query: 83 PHQLDTSGTSTNDHFMHSSSAGPFFAVSENFVHQP-SSSNYDRQAFHVDSGFIDLTMGSG 141
P QLDT GTS NDHFMH+S+AGPFFAVSEN+VH P SSSNYDR AFHVDSGFIDLTMGSG
Sbjct: 1 PQQLDTPGTS-NDHFMHTSNAGPFFAVSENYVHPPPSSSNYDRHAFHVDSGFIDLTMGSG 59
Query: 142 RAHHKRKSPGIPSVYERGSSSGYFNAGTSSDLPIPPESWPEKPNMDPQYMPWDHAAMAPT 201
R HHKRKSPGIPSVYERGSSSGYFNAG+S+DLP PPESWPEKPNM+ QY+PWDH AM PT
Sbjct: 60 RGHHKRKSPGIPSVYERGSSSGYFNAGSSTDLPTPPESWPEKPNMNSQYLPWDHVAMTPT 119
Query: 202 FRGAGLSMKGESSVRNVRSRSSLDLESNLCRTHLSSSHSHNSYPTVPPVSHSSLADLS-Q 260
FRGAGLSMKGESSVRNVRSRS+LDLESNL RTHL +HS NSY T P H SLADLS Q
Sbjct: 120 FRGAGLSMKGESSVRNVRSRSALDLESNLSRTHLPINHSLNSYLTASPFGHCSLADLSAQ 179
Query: 261 VSTSLTRDWSQMNVTPANGRVLLPDASTFGLETSHFPVGNAAAAAAASNATVDVGSFHHD 320
V+T LTRDWSQMNVTPANGRVLLPDAST GLETSHFPVGNAA A+ SNA DVGSFHH+
Sbjct: 180 VTTPLTRDWSQMNVTPANGRVLLPDASTSGLETSHFPVGNAATAS--SNAPADVGSFHHE 237
Query: 321 FGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASSSLRLGQATPSDNGLPMVAEGY 380
FGTSRNPTTAQSFQNLTQ ARGTRSNYSQRSTPA+RASS+LR+ A PSDNGLPMVAEGY
Sbjct: 238 FGTSRNPTTAQSFQNLTQPARGTRSNYSQRSTPAFRASSNLRMSHAVPSDNGLPMVAEGY 297
Query: 381 PSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVERASLYG 440
SRHPRPL TVGWRN DRNGRSRISSERYRSLAD+A LHAR SS EVPGFMIVERASLYG
Sbjct: 298 SSRHPRPLTTVGWRNGDRNGRSRISSERYRSLADEAGLHARFSS-EVPGFMIVERASLYG 356
Query: 441 SRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQCQDE 500
SRN+LDQHR+MRMD+DNMSYEELLALGERIGQVNTGLSEDVLSKC+TETIYCSSDQCQDE
Sbjct: 357 SRNILDQHRDMRMDVDNMSYEELLALGERIGQVNTGLSEDVLSKCLTETIYCSSDQCQDE 416
Query: 501 GSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSALPEDKKDK 556
GSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSS LPEDKKDK
Sbjct: 417 GSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSVLPEDKKDK 472
>emb|CAA85320.1| C-terminal zinc-finger [Glycine max] gi|1076498|pir||S49445 RING
finger protein Pzf - soybean (fragment)
Length = 388
Score = 540 bits (1390), Expect = e-152
Identities = 272/407 (66%), Positives = 318/407 (77%), Gaps = 21/407 (5%)
Query: 152 IPSVYERGSSSGYFNAGTSSDLPIPPESWPEKPNMDPQYMPWDHAAMAPTFRGAGLSMKG 211
IP V ERGS+S Y NA ++D P E PEKPNMD YMPWDH M PTFRG GLS++G
Sbjct: 1 IPPVCERGSTSRYSNATNAADRPTSSELQPEKPNMDSLYMPWDHVNMTPTFRGRGLSIRG 60
Query: 212 ESSVRNVRSRSSLDLESNLCRTHLSSSHSHNSYPTVPPVSHSSLADLS-QVSTSLTRDWS 270
E +RNVRSRS+LDLESNL RTHLS++H HNSY T P+ HS++ DLS Q S +LTRDWS
Sbjct: 61 EGPLRNVRSRSALDLESNLARTHLSNTHPHNSYSTGLPIDHSNMVDLSTQTSGTLTRDWS 120
Query: 271 QMNVTPANGRVLLPDASTFGLETSHFPVGNAAAAAAASNATVDVGSFHHDFGTSRNPTTA 330
M++ P +GRV DA+ F E SHF +G+++ SNA VDVG FH++FGTSRNPT
Sbjct: 121 PMSICPPHGRVSSSDANAFNHEASHFLIGSSS-----SNAPVDVGGFHNEFGTSRNPTAP 175
Query: 331 QSFQN-LTQTARGTRSNYSQRSTPAYRASSSLRLGQATPSDNGLPMVAEGYPSRHPRPLN 389
QSF N LTQTARG SNYSQRSTP +RASS LRLG+ PSD+GL MV+E Y SR PRPL
Sbjct: 176 QSFHNNLTQTARGVHSNYSQRSTPTFRASS-LRLGRVAPSDDGLHMVSESYSSRQPRPLT 234
Query: 390 TVGWRNSDRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVERASLYGSRNVLDQHR 449
TVGW+N++RNGRSRI S+RYRSL D+ GFMIV+R SLYG RN+LD+HR
Sbjct: 235 TVGWQNNNRNGRSRIPSDRYRSLDDE-------------GFMIVDRTSLYGPRNMLDRHR 281
Query: 450 EMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQCQDEGSCVICLEE 509
+MRMDIDNMSYEELLALGERIG V+TGLSED++SK +TETIYCSS+Q Q+E +C ICLEE
Sbjct: 282 DMRMDIDNMSYEELLALGERIGHVSTGLSEDLISKYLTETIYCSSEQSQEEEACAICLEE 341
Query: 510 YKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSALPEDKKDK 556
YKNMD VGTLK CGHDYHV CI+KWLSMKK+CPICK+SALPEDKK K
Sbjct: 342 YKNMDYVGTLKACGHDYHVGCIRKWLSMKKVCPICKASALPEDKKGK 388
>gb|AAM20304.1| putative protein with C-terminal RING finger [Arabidopsis thaliana]
gi|17979426|gb|AAL49855.1| putative protein with
C-terminal RING finger [Arabidopsis thaliana]
gi|42571089|ref|NP_973618.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
gi|30687050|ref|NP_850278.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
Length = 546
Score = 390 bits (1001), Expect = e-107
Identities = 238/563 (42%), Positives = 317/563 (56%), Gaps = 27/563 (4%)
Query: 1 MGHRHLFNASPMFEGEADPNWNNMLTDQHHVNHGGTSSSENGSFIYPVENMSIDNIYFPS 60
MGHRH +S F+ E D WN+ + + + + +SEN S +YP ENM + + S
Sbjct: 1 MGHRHFLGSSQFFDDEHDQGWNHTHPEHPYSSQATSGTSENRSHVYPAENMLNEGMPVSS 60
Query: 61 HWNANTRSNGYASSGPNIEVPPPHQLDTSGTSTNDHFMHSSSAGPFF-AVSENFVHQPSS 119
HWN++ N Y SG ++E PH G S H +S P F A EN+V SS
Sbjct: 61 HWNSSPGPNAYTDSGHSVE--RPHY--NPGVSGPSHDPSVNSTVPTFSAPHENYVTFASS 116
Query: 120 SNYDRQAFHVDSGFIDLTMGSGRAHHKRKSPGIPSVYERGSSSGYFNAGTSSDLPIPPES 179
S+Y+ Q + S +M S R KRK P S+YE GSSS Y T +D P E
Sbjct: 117 SSYNSQTWSNASYVDHQSMESVRGAQKRKRPCPSSIYEMGSSSQYHGDRTPADTHFPSEL 176
Query: 180 WPEKP---NMDPQYMPWDHAAMAPTFRGAGLSMKGESSVRNVRSRSSLDLESNLCRTHLS 236
K + DP YMPW M PT+R LS++GESS RNVRSR +LD E++L R +L
Sbjct: 177 HLGKSITHDHDPHYMPW---LMNPTYRSNNLSIRGESSSRNVRSRPTLDSETSLGRNNLP 233
Query: 237 SSHSHNSYPTVP-PVSHSSLADLSQVSTSLTRDWSQMNVTPANGRVLLPDASTFGLETSH 295
S S +S+ T V H ++ +DW+ ++P +L D + F ET++
Sbjct: 234 RSLSLDSHSTHHHSVDHYGSGQFPGQTSHGNKDWNCARLSP-----VLRDINGFSPETNN 288
Query: 296 FPVGNAAAAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAY 355
F + + + N + G HH+ +RNPT + T T + S +S RST Y
Sbjct: 289 FLPARSVVNSLSVNTS---GYHHHELTGNRNPTVSHGVPG-TSTLSTSSSRFSHRSTSTY 344
Query: 356 RASS-SLRLGQ-ATPSDNGLPMVAEGYPSRHPRPLNTVGWRNSDRNGRSRISSERYRSLA 413
R+SS R G A+ S + +V E YPSRH RP + WR+ DR GR R S ER++
Sbjct: 345 RSSSHGSRSGHVASSSGDRSHLVTETYPSRHLRPPPHISWRSGDRPGRRRSSYERFQPPF 404
Query: 414 DQAALHARLSSSEVPGFMIVERA-SLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQ 472
D+ ALH R SS E FM+ +R YGSRN+LD HR+MR+DIDNMSYEELL LGERIG
Sbjct: 405 DEVALHERFSSEE---FMVEDRQPQYYGSRNMLDHHRDMRLDIDNMSYEELLDLGERIGS 461
Query: 473 VNTGLSEDVLSKCVTETIYCSSDQCQDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIK 532
VNTGLS+ +S C+ T+Y S Q +++ C ICLEEYK +++G +K CGHDYH CIK
Sbjct: 462 VNTGLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIK 521
Query: 533 KWLSMKKLCPICKSSALPEDKKD 555
KWLSMK CPICKS ALP+ K+
Sbjct: 522 KWLSMKNSCPICKSPALPDASKN 544
>gb|AAD18144.1| putative protein with C-terminal RING finger [Arabidopsis thaliana]
gi|25408534|pir||B84789 probable protein with C-terminal
RING finger [imported] - Arabidopsis thaliana
Length = 498
Score = 287 bits (734), Expect = 7e-76
Identities = 205/525 (39%), Positives = 272/525 (51%), Gaps = 57/525 (10%)
Query: 40 ENGSFIYPVENMSIDNIYFPSHWNANTRSNGYASSGPNIEVPPPHQLDTSGTSTNDHFMH 99
+N S +YP ENM + + SHWN++ N Y SG ++E PH G S H
Sbjct: 20 KNRSHVYPAENMLNEGMPVSSHWNSSPGPNAYTDSGHSVE--RPHY--NPGVSGPSHDPS 75
Query: 100 SSSAGPFF-AVSENFVHQPSSSNYDRQAFHVDSGFIDLTMGSGRAHHKRKSPGIPSVYER 158
+S P F A EN+V SSS+Y+ Q + S +M S R KRK P S+YE
Sbjct: 76 VNSTVPTFSAPHENYVTFASSSSYNSQTWSNASYVDHQSMESVRGAQKRKRPCPSSIYEM 135
Query: 159 GSSSGYFNAGTSSDLPIPPESWPEKP---NMDPQYMPWDHAAMAPTFRGAGLSMKGESSV 215
GSSS Y T +D P E K + DP YMPW M PT+R LS++GESS
Sbjct: 136 GSSSQYHGDRTPADTHFPSELHLGKSITHDHDPHYMPW---LMNPTYRSNNLSIRGESSS 192
Query: 216 RNVRSRSSLDLESNLCRTHLSSSHSHNSYPTVP-PVSHSSLADLSQVSTSLTRDWSQMNV 274
RNVRSR +LD E++L R +L S S +S+ T V H ++ +DW+ +
Sbjct: 193 RNVRSRPTLDSETSLGRNNLPRSLSLDSHSTHHHSVDHYGSGQFPGQTSHGNKDWNCARL 252
Query: 275 TPANGRVLLPDASTFGLETSHFPVGNAAAAAAASNATVDVGSFHHDFGTSRNPTTAQSFQ 334
+P +L D + F ET++F + + + N + G HH+ +RNPT +
Sbjct: 253 SP-----VLRDINGFSPETNNFLPARSVVNSLSVNTS---GYHHHELTGNRNPTVSHGVP 304
Query: 335 NLTQTARGTRSNYSQRSTPAYRASS-SLRLGQ-ATPSDNGLPMVAEGYPSRHPRPLNTVG 392
T T + S +S RST YR+SS R G A+ S + +V E YPSRH RP +
Sbjct: 305 G-TSTLSTSSSRFSHRSTSTYRSSSHGSRSGHVASSSGDRSHLVTETYPSRHLRPPPHIS 363
Query: 393 WRNSDRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVER-ASLYGSRNVLDQHREM 451
WR+ DR GR R S ER++ D+ ALH R SS E FM+ +R YGSRN+LD HR+M
Sbjct: 364 WRSGDRPGRRRSSYERFQPPFDEVALHERFSSEE---FMVEDRQPQYYGSRNMLDHHRDM 420
Query: 452 RMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQCQDEGSCVICLEEYK 511
R+DIDNMSYE L L +S +VLS +I K
Sbjct: 421 RLDIDNMSYERNLQL---------LVSNNVLS--------------------IISNRGAK 451
Query: 512 NMDDV-GTLKTCGHDYHVSCIKKWLSMKKLCPICKSSALPEDKKD 555
M ++ G +K CGHDYH CIKKWLSMK CPICKS ALP+ K+
Sbjct: 452 KMCNLPGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDASKN 496
>ref|XP_475646.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|46981341|gb|AAT07659.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 533
Score = 169 bits (427), Expect = 3e-40
Identities = 158/498 (31%), Positives = 224/498 (44%), Gaps = 83/498 (16%)
Query: 92 STNDHFMHSSSAGPFFAVSENFVHQPSSSN-YDRQAFHVDSGFIDLTMGSGRAHHKRKSP 150
S + H SS+G + N H P+SS + + + S +D R KR++P
Sbjct: 79 SYSGHAPAGSSSGSY--APYNTQHMPASSYPHGSEDNFIPSSHVD----GRRVALKRRNP 132
Query: 151 GIPSVYERGSSSGYFNAGTSSDLPIPPESWPEKPNMDPQYMPWDHAAMAPTFRGAG---- 206
I G G + AG+SS+ S P PN P P + P+ G+
Sbjct: 133 IIHPT--DGFGVGNYYAGSSSNTQF---SRPMPPNPIP---PPESCVRMPSHLGSNHWND 184
Query: 207 -LSMKGESSVRNVRSR---SSLDLESNLCRTHLSSSHSHNSYPTVPPVSHSSLADLSQVS 262
+ E S RNVR R S++ LE + SSS + VPP ++ S
Sbjct: 185 HRYVNHEGSQRNVRGRHDHSTIHLEQSPAAACPSSSIN------VPPYHPNANGPFG--S 236
Query: 263 TSLTRDWSQMNVTPANGRVLLP--DASTFGL-ETSHFPVG---NAAAAAAASNATVDVGS 316
+ RD + ++V P R+L P D S+ E ++P N +A + D
Sbjct: 237 APVQRDRAPLSVHP---RILPPGPDGSSIAFRERPYYPAPQSTNISAPVPTLPISCDSAP 293
Query: 317 FHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASSSLRLGQATPSDNGLPMV 376
F H R+ R+N PA+ +SS+ P+ P
Sbjct: 294 FAHGGYAPRS---------------AHRNNLRTYPPPAFASSSNPGAVSHEPAIPSYPPA 338
Query: 377 AEGYPS--------------------RHPRPLNTVGWRNSDRNGRSRISSERYRSLADQA 416
A YP RHPR ++ VG S R+ R R S + L +
Sbjct: 339 APSYPPATSAASSSVQPFHAEAAAHLRHPRHVS-VGGSGSARSRRMRDSYHGFHHLMIE- 396
Query: 417 ALHARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTG 476
L S FM++++ ++ SR D H +MR+DID+MSYEELLAL ERIG VNTG
Sbjct: 397 --DNNLGRSAAERFMMLDQLVIHESREAFDPHWDMRLDIDDMSYEELLALEERIGHVNTG 454
Query: 477 LSEDVLSKCVTETIYCSSDQCQDEGS---CVICLEEYKNMDDVGTLKTCGHDYHVSCIKK 533
L+++ +S CV E CSS QD+ CVICLEEYK+ D +G LK CGH +H +CIKK
Sbjct: 455 LADEKISGCVMEVACCSSSHLQDDQDNERCVICLEEYKHEDTLGRLK-CGHGFHCNCIKK 513
Query: 534 WLSMKKLCPICKSSALPE 551
WL +K CP+CK++A E
Sbjct: 514 WLQVKNTCPVCKAAAADE 531
>ref|XP_493762.1| putative C-terminal zinc-finger [Oryza sativa (japonica
cultivar-group)] gi|8570055|dbj|BAA96760.1| putative
C-terminal zinc-finger [Oryza sativa (japonica
cultivar-group)] gi|9757680|dbj|BAB08199.1| ESTs
AU075348(C11252),C98151(C0804),C98150(C0804),
C25947(C11252) correspond to a region of the predicted
gene.~Similar to Lotus japonicus gene encoding RING
finger protein (Y09539) [Oryza sativa (japonica
cultivar-group)]
Length = 488
Score = 168 bits (426), Expect = 4e-40
Identities = 158/502 (31%), Positives = 228/502 (44%), Gaps = 64/502 (12%)
Query: 61 HWNANTRSNGYASSGPNIEVPPPHQLDTSGTSTND--HFMHSSSAG--PFFAVSENFVHQ 116
H N RSN SS + H++ +GT N H+ SS G + +E +
Sbjct: 36 HGNVAIRSNDLPSSS-RVAQYSGHRVKNTGTLHNSYVHYPAGSSGGHVSYNPQTEPVITY 94
Query: 117 PSSSNYDRQAFHVDSGFIDLTMGSGRAHHKRKSPGIPSVYERGSSSGYFNAGTSSDLPIP 176
P S + F S ID + A KRK+P I Y + +S+
Sbjct: 95 PHRSEGE---FARGSSQID----NRTAAVKRKNPVIYPEYSINGDGYCAGSSSSTQFSNY 147
Query: 177 PESWPEKPNMDPQYMPWDHAAMAPTFRGAGLSMKGESSVRNVRSRSSLDLESNLCRTHLS 236
P+ P ++ Q P ++ P + E S RNVR+R
Sbjct: 148 PQPAPFSESLHRQMPP----SVGPINWNDQSLVNQEGSQRNVRAR--------------- 188
Query: 237 SSHSHNSYPTVPPVSHSSLADLSQVSTSLTRDW----SQMNVTP--ANGRVLLPDASTFG 290
H+ N+ P HS+ +++SQ STS+ R+ ++M P A+G T G
Sbjct: 189 --HNFNNISLEPRPVHST-SNVSQ-STSMKRNGPSFSTRMRTMPSGASGMHSGEMPYTMG 244
Query: 291 LETSHFPVGNAAAAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQR 350
S PV +++++ V + H G T S+ +L A + +
Sbjct: 245 SSNSSVPVPTLQGSSSSAIFASGVFAPRHVHGD-----TVPSYIHLPSVASSSSTAIPHE 299
Query: 351 ST-PAYRASSSLRLGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRNSDRNGRSRISSERY 409
P+Y+ ++S + LP+ A SRH R + +G NS RN R+R S
Sbjct: 300 VIIPSYQPATSATTSTPMRASQPLPVRAVA-SSRHARNV-LIGHANSGRNRRARSSYYGI 357
Query: 410 RSLADQAALHARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGER 469
+ L A +++++ +L SR D HR MR+DIDNMSYE+LLALGE
Sbjct: 358 QPLMIDAQQ-----------LIMMQQFALRESREAQDPHRAMRLDIDNMSYEDLLALGES 406
Query: 470 IGQVNTGLSEDVLSKCVTETIYCSSDQ---CQDEGSCVICLEEYKNMDDVGTLKTCGHDY 526
IG V TGL ++ +S CV E IYCSSD+ QD+G C ICLEEYK+ +G LK C HD+
Sbjct: 407 IGNVCTGLVDEKISGCVREVIYCSSDEQQNDQDDGKCAICLEEYKDNSLLGILK-CNHDF 465
Query: 527 HVSCIKKWLSMKKLCPICKSSA 548
H C+KKWL K CPICKS+A
Sbjct: 466 HTDCVKKWLKEKNSCPICKSAA 487
>gb|AAD17397.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|25411642|pir||B84530 probable RING zinc finger
protein [imported] - Arabidopsis thaliana
gi|15226553|ref|NP_179155.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
gi|42570793|ref|NP_973470.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
Length = 704
Score = 137 bits (346), Expect = 7e-31
Identities = 76/161 (47%), Positives = 104/161 (64%), Gaps = 14/161 (8%)
Query: 396 SDRNGRSRISSERYRSLADQAALHA--RLSSSEVPGFMIVERASLYGSRNVLDQHREMRM 453
+D NGR++I SE + LHA R + V +M+ + G ++ D+HREMR+
Sbjct: 548 ADGNGRNQIISEI------RQVLHAMRRGENLRVEDYMVFDPLIYQGMTDMHDRHREMRL 601
Query: 454 DIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQC-----QDEGSCVICLE 508
D+DNMSYEELLALGERIG V+TGLSE+V+ K + + + SS Q+ C IC E
Sbjct: 602 DVDNMSYEELLALGERIGDVSTGLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQE 661
Query: 509 EYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSAL 549
EY D++GTLK CGH++H CIK+W+ +K LCPICK+ AL
Sbjct: 662 EYVEGDNLGTLK-CGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>gb|AAV85696.1| At4g34040 [Arabidopsis thaliana] gi|7270353|emb|CAB80121.1|
putative protein [Arabidopsis thaliana]
gi|2911058|emb|CAA17568.1| putative protein [Arabidopsis
thaliana] gi|51536502|gb|AAU05489.1| At4g34040
[Arabidopsis thaliana] gi|15235211|ref|NP_195130.1| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana] gi|7486285|pir||T05432
hypothetical protein F28A23.200 - Arabidopsis thaliana
Length = 666
Score = 136 bits (342), Expect = 2e-30
Identities = 71/156 (45%), Positives = 101/156 (64%), Gaps = 7/156 (4%)
Query: 396 SDRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDI 455
+D +GR+R+ SE + L+ R + +M+ + G + D+HR+MR+D+
Sbjct: 514 ADNDGRNRLISEIRQVLSAMR----RGENLRFEDYMVFDPLIYQGMAEMHDRHRDMRLDV 569
Query: 456 DNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSS--DQCQDEGSCVICLEEYKNM 513
DNMSYEELLALGERIG V+TGLSE+V+ K + + + SS QD C +C EEY
Sbjct: 570 DNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEYAEG 629
Query: 514 DDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSAL 549
DD+GTL CGH++H +C+K+WL +K LCPICK+ AL
Sbjct: 630 DDLGTL-GCGHEFHTACVKQWLMLKNLCPICKTVAL 664
>dbj|BAB09196.1| unnamed protein product [Arabidopsis thaliana]
gi|28416527|gb|AAO42794.1| At5g42940/MBD2_14
[Arabidopsis thaliana] gi|18087616|gb|AAL58938.1|
AT5g42940/MBD2_14 [Arabidopsis thaliana]
gi|15239131|ref|NP_199108.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
Length = 691
Score = 133 bits (335), Expect = 1e-29
Identities = 125/443 (28%), Positives = 188/443 (42%), Gaps = 65/443 (14%)
Query: 153 PSVYERGSSSGYFNAGTSSDLPIPPESW-----------------------PEKPNMDPQ 189
PS ++ + F AGT P+PP PN P
Sbjct: 269 PSDHQETVNPSTFAAGTVVRRPVPPSQLNLSRHLPADQHSLDLRPGQSFVVSRNPNSTPV 328
Query: 190 YMPWDHAAMAPTFRGAGLSMKGESSVRNVRSRSSLDLESNLCRTHLSSSHSHNSYPTVPP 249
+P M P FR G S+ G +S S+ +E NL HL + S +
Sbjct: 329 SIPPGSRTMLPPFRWTGSSLVGGTS------NSTAPVERNL---HLDETRSRSIPGNTLE 379
Query: 250 VSHSSLADLSQVSTSLTRDWSQMNVTPANGRVLLPDASTFGLETSHFPVGNAAAAAAASN 309
+ + ++ + R S NVT N L AS+ S V ++
Sbjct: 380 IPMFAAPEVG----NFARSQSSRNVTNGN----LNSASSVSRTGSTTSVPPPPPPSSNLA 431
Query: 310 ATVDVGSFHHDFG-TSRNPTTAQSF-QNLTQTARGTRS--NYSQRSTPAYRASSSLRLGQ 365
T S H+ T R+ +S +L A RS + + RS +S L L
Sbjct: 432 WTSYQNSPHYQRRRTERSELARRSLLSSLAADATNQRSGDHPTLRSLAPPASSDGLVL-- 489
Query: 366 ATPSDNGLPMVAEGYPSRHP-------------RPLNTVGWRNSDRNGRSRISSERYRSL 412
P + M Y P PL + + GRSR+ + +++
Sbjct: 490 -QPGGDNSQMHNRAYSRAGPLFDRQGDSVVGIPHPLRALA---AASRGRSRLMVSQMQNV 545
Query: 413 ADQAALHARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQ 472
D A ++ + M++ + L+ D++R+MR+D+DNMSYEELLAL ERIG
Sbjct: 546 LDVMRRDANNNNLRLEDVMLLNHSVLFDGATGHDRYRDMRLDVDNMSYEELLALEERIGD 605
Query: 473 VNTGLSEDVLSKCVTETIYCSSDQC-QDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCI 531
V TG++E+ +S + + Y S+ + QD C +C EEY +D+GTL+ CGH++H CI
Sbjct: 606 VCTGVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYTEGEDMGTLE-CGHEFHSQCI 664
Query: 532 KKWLSMKKLCPICKSSALPEDKK 554
K+WL K LCPICK++ L KK
Sbjct: 665 KEWLKQKNLCPICKTTGLNTAKK 687
>ref|NP_175132.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis
thaliana] gi|7767667|gb|AAF69164.1| F27F5.26
[Arabidopsis thaliana]
Length = 645
Score = 132 bits (333), Expect = 2e-29
Identities = 106/394 (26%), Positives = 180/394 (44%), Gaps = 45/394 (11%)
Query: 186 MDPQYMPWDHAAMAPTFRGAGL--------SMKGESSVRNVRSRSSLDLESNLCRTHLS- 236
++P Y + AP+ GL SM+ ++ N S++ N TH+
Sbjct: 259 VNPTYQQETVSNFAPSLNSPGLIPADHQQISMRYGHALGNFASQNP-----NAPATHMPP 313
Query: 237 ---SSHSHNSYPTVPPVSHSSLA--DLSQVSTSLTRDWSQMNVTPANGRVLLPDASTFGL 291
++ N+ P +S SS D + + + TR S P + +P +
Sbjct: 314 VSRNTFQWNTSPVAAVISSSSATPVDRNVIHRNATRQRSNTLEIP----LFVPAPELRNV 369
Query: 292 ETSHFPVGNAAAAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRS 351
H NA+ A ++++ + P S N + + R +
Sbjct: 370 AHGHIS-RNASGARHVASSSSRTSVQPSPSSPALTPYQNNSLHNQRRLSENFRRSLLSSL 428
Query: 352 TPAYRASSSLRLGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRN---------------S 396
RA+ SL A+P+++ L + H R + G R S
Sbjct: 429 VTQQRAARSLA-HPASPNEHVLQSGGDNTSQVHNRASSRAGPRQGQDATGISHSLRGLAS 487
Query: 397 DRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDID 456
GR+R+ + R++ + L +V M++ ++ + G+ ++ D++R+MR+D+D
Sbjct: 488 TSRGRTRMGASEIRNILEHMRRAGNLRLEDV---MLLNQSIMLGAADIHDRYRDMRLDVD 544
Query: 457 NMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQ-CQDEGSCVICLEEYKNMDD 515
NM+YEELL+L ERIG V TGL+E+ +S + + Y SS + Q+ C +C EEYK ++
Sbjct: 545 NMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSSTRSSQEVEPCCVCQEEYKEEEE 604
Query: 516 VGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSAL 549
+G L+ CGHD+H CIK+WL K LCPICK++ L
Sbjct: 605 IGRLE-CGHDFHSQCIKEWLKQKNLCPICKTTGL 637
>dbj|BAD38048.1| putative RING-H2 finger protein RHG1a [Oryza sativa (japonica
cultivar-group)]
Length = 580
Score = 130 bits (327), Expect = 1e-28
Identities = 78/173 (45%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 386 RPLNTVGWRNSDRNGRSRISSERYRSLA---DQAALHARLSSSEVPGFMIVERASLYGSR 442
RP T +RNGR IS E + D+ A L+ ++ M++E L G+
Sbjct: 408 RPPQTFHDLFRERNGRRHISIEGIAEVLLALDRIEQEAELTYEQL---MVLETNILLGAF 464
Query: 443 NVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYC-----SSDQC 497
DQH +MRMDIDNMSYEELLALG+RIG V+T LSE+ KC+ +IY ++ Q
Sbjct: 465 TSHDQHSDMRMDIDNMSYEELLALGDRIGSVSTALSEEQFVKCLRRSIYIPVATKANAQV 524
Query: 498 QDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSALP 550
D+ C IC EEY ++VG L C H YHV CI +WL K CPICK+SA P
Sbjct: 525 VDDIKCSICQEEYIEGEEVGRL-GCEHQYHVCCIHQWLRQKNWCPICKASAEP 576
>gb|AAC69857.1| RING-H2 finger protein RHG1a [Arabidopsis thaliana]
gi|11358785|pir||T51859 RING-H2 finger protein RHG1a
[imported] - Arabidopsis thaliana (fragment)
Length = 190
Score = 129 bits (324), Expect = 2e-28
Identities = 67/171 (39%), Positives = 104/171 (60%), Gaps = 5/171 (2%)
Query: 385 PRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVERASLYGSRNV 444
P PL + + GRSR+ + +++ D A ++ + M++ + L+
Sbjct: 20 PHPLRALA---AASRGRSRLMVSQMQNVLDVMRRDANNNNLRLEDVMLLNHSVLFDGATG 76
Query: 445 LDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQC-QDEGSC 503
D++R+MR+D+DNMSYEELLAL ERIG V TG++E+ +S + + Y S+ + QD C
Sbjct: 77 HDRYRDMRLDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNTKSPQDAEPC 136
Query: 504 VICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSALPEDKK 554
+C EEY +D+GTL+ CGH++H CI++WL K LCPICK++ L KK
Sbjct: 137 CVCQEEYTEGEDMGTLE-CGHEFHSQCIEEWLKQKNLCPICKTTGLNTAKK 186
>ref|XP_474118.1| OSJNBa0010D21.9 [Oryza sativa (japonica cultivar-group)]
gi|38345496|emb|CAD41707.2| OSJNBa0010D21.9 [Oryza
sativa (japonica cultivar-group)]
Length = 667
Score = 128 bits (321), Expect = 5e-28
Identities = 61/113 (53%), Positives = 84/113 (73%), Gaps = 3/113 (2%)
Query: 439 YGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCS--SDQ 496
YG ++ D+HR+MR+DIDNMSYEELLAL ERIG V+TGLSE+ ++K + + + S +
Sbjct: 554 YGGVDIHDRHRDMRLDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEA 613
Query: 497 CQDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSAL 549
+E C IC EEY + DD+GTL CGHD+HV C+++WL +K CPICK++AL
Sbjct: 614 SVEEEPCCICQEEYVDGDDLGTL-DCGHDFHVGCVRQWLVVKNTCPICKNTAL 665
>gb|AAT77400.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 500
Score = 128 bits (321), Expect = 5e-28
Identities = 125/406 (30%), Positives = 181/406 (43%), Gaps = 80/406 (19%)
Query: 167 AGTSSDLPIPPESWPEKPNMDPQYMPWDHAAMAPTFRGAGLSMKGESSVRNVRSRSSLDL 226
A +SS +PP +P + W+ + A G+S E S S SL+
Sbjct: 157 ASSSSSAYVPP---------NPLHRSWNASFEANILPSTGVSNPPEYS-----SADSLN- 201
Query: 227 ESNLCRTHLSSSHSHNSYPTVPPVSHSSL--ADLSQVS-TSLTRDWSQMNVTPA------ 277
SN +H H H +Y V P H S A ++Q S T W N
Sbjct: 202 NSNSMASHPELVH-HGNY--VFPAGHMSQYNAWIAQASRTGGVPQWEHGNAAANPPGGFV 258
Query: 278 -NGRVLLPDASTFGLETSHFPVGNAAAAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNL 336
+G + +P+ G + F +N + FH +NP + L
Sbjct: 259 HSGTIDMPNGGLQGYQAGPF-----------ANYYGPLPHFH------QNPLNSMQHPAL 301
Query: 337 TQTARGTRSNYSQRSTPAYRASSSLRLGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRNS 396
N+ Q P S+ L PS NGLP+ PR L
Sbjct: 302 F--------NHIQMQVPHQHCLSNNLLHH--PSGNGLPL--------DPRILAI------ 337
Query: 397 DRNGRSRISSERYRSLADQA-ALHARLSSSEVPGFMIVERASLYGSRNVLDQHREMRMDI 455
N SLA+Q A +R+ E F+ + R LY + V+D+HR+MR+D+
Sbjct: 338 SSNSGHTFGPTAQPSLANQVNAGSSRIQPYENAPFVDLSR--LYEA-GVIDEHRDMRLDV 394
Query: 456 DNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIY-----CSSDQCQ-DEGSCVICLEE 509
D+M+YEEL+AL ERIG VN+G +E + + + + Y C DQ ++ +C+IC EE
Sbjct: 395 DSMTYEELVALEERIGNVNSGFTESYIEENLKSSSYVPDADCMPDQSSVEKDACIICQEE 454
Query: 510 YKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSALPEDKKD 555
Y+ + VGTL CGH YH CIK WL +K LCPICK++ALP D+++
Sbjct: 455 YEAKELVGTLG-CGHKYHAMCIKGWLMVKNLCPICKTTALPADRRN 499
>emb|CAC08239.1| Pspzf zinc finger protein-like [Arabidopsis thaliana]
Length = 498
Score = 127 bits (318), Expect = 1e-27
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 23/256 (8%)
Query: 303 AAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASSSLR 362
++ SN G F ++A S Q + T N S P+ SS+ R
Sbjct: 256 SSTVVSNGCRRAGYFGRSERLGATASSATSRQ-MPHPTTPTDPNPSLSFCPSNIYSSTGR 314
Query: 363 LGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARL 422
+ P G P A+ S +N G + + NG + + R D+ + +L
Sbjct: 315 VHSNMP---GSPTEADPSSSL----VNRDGLSHYNMNGIAEVLLALERIEHDEELTYEQL 367
Query: 423 SSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVL 482
+S E F G DQHR+MR+DIDNMSYEELLALG+++G V+T LSE+ L
Sbjct: 368 ASIETNLFSS-------GMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEAL 420
Query: 483 SKCVTETIYCSSDQC-------QDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWL 535
S+ + ++IY +D+ D+ C IC EEY + D++GT+ C H YHVSC+++WL
Sbjct: 421 SRSLKQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTI-PCQHMYHVSCVQQWL 479
Query: 536 SMKKLCPICKSSALPE 551
MK CPICK+SA E
Sbjct: 480 RMKNWCPICKTSAEEE 495
>gb|AAU95454.1| At5g10650 [Arabidopsis thaliana] gi|22326712|ref|NP_196626.2| zinc
finger (C3HC4-type RING finger) family protein
[Arabidopsis thaliana] gi|58652060|gb|AAW80855.1|
At5g10650 [Arabidopsis thaliana]
Length = 525
Score = 127 bits (318), Expect = 1e-27
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 23/256 (8%)
Query: 303 AAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASSSLR 362
++ SN G F ++A S Q + T N S P+ SS+ R
Sbjct: 283 SSTVVSNGCRRAGYFGRSERLGATASSATSRQ-MPHPTTPTDPNPSLSFCPSNIYSSTGR 341
Query: 363 LGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARL 422
+ P G P A+ S +N G + + NG + + R D+ + +L
Sbjct: 342 VHSNMP---GSPTEADPSSSL----VNRDGLSHYNMNGIAEVLLALERIEHDEELTYEQL 394
Query: 423 SSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVL 482
+S E F G DQHR+MR+DIDNMSYEELLALG+++G V+T LSE+ L
Sbjct: 395 ASIETNLFSS-------GMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEAL 447
Query: 483 SKCVTETIYCSSDQC-------QDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWL 535
S+ + ++IY +D+ D+ C IC EEY + D++GT+ C H YHVSC+++WL
Sbjct: 448 SRSLKQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTI-PCQHMYHVSCVQQWL 506
Query: 536 SMKKLCPICKSSALPE 551
MK CPICK+SA E
Sbjct: 507 RMKNWCPICKTSAEEE 522
>gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana]
gi|42573471|ref|NP_974832.1| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
gi|30689641|ref|NP_568462.2| zinc finger (C3HC4-type
RING finger) family protein [Arabidopsis thaliana]
gi|48958529|gb|AAT47817.1| At5g24870 [Arabidopsis
thaliana]
Length = 520
Score = 127 bits (318), Expect = 1e-27
Identities = 90/235 (38%), Positives = 124/235 (52%), Gaps = 34/235 (14%)
Query: 325 RNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASSSLRLGQ----ATPSDNGLPMVAEGY 380
R PT A N +++A +RS + S P SS+ RL +PS+ GL
Sbjct: 301 RPPTRADL--NPSRSAEASRSPLNSYSRPI---SSNGRLRSLMMPGSPSEAGLSRSL--- 352
Query: 381 PSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARLSSSEVPGFMIVERASLYG 440
+N +R + NG + + R D+ + +L+ E F L G
Sbjct: 353 -------MNRDTFRRYNMNGVAEVLLALERIEQDEELTYEQLAVLETNLF-------LNG 398
Query: 441 SRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKCVTETIYCSSDQC--- 497
+ DQHR+MR+DIDNMSYEELLAL E++G V+T LSE+ L K + +IY +D+
Sbjct: 399 MSSFHDQHRDMRLDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDI 458
Query: 498 ----QDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCPICKSSA 548
D+ C IC EEY + D+VGTL C H YHVSC ++WL MK CPICK+SA
Sbjct: 459 CLNKDDDVKCSICQEEYVDGDEVGTL-PCQHKYHVSCAQQWLRMKNWCPICKTSA 512
>gb|AAM20531.1| Pspzf zinc finger protein-like [Arabidopsis thaliana]
Length = 525
Score = 127 bits (318), Expect = 1e-27
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 23/256 (8%)
Query: 303 AAAAASNATVDVGSFHHDFGTSRNPTTAQSFQNLTQTARGTRSNYSQRSTPAYRASSSLR 362
++ SN G F ++A S Q + T N S P+ SS+ R
Sbjct: 283 SSTVVSNGCRRAGYFGRSERLGATASSATSRQ-MPHPTTPTDPNPSLSFCPSNIYSSTGR 341
Query: 363 LGQATPSDNGLPMVAEGYPSRHPRPLNTVGWRNSDRNGRSRISSERYRSLADQAALHARL 422
+ P G P A+ S +N G + + NG + + R D+ + +L
Sbjct: 342 VHSNMP---GSPTEADPSSSL----VNRDGLSHYNMNGIAEVLLALERIEHDEELTYEQL 394
Query: 423 SSSEVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVL 482
+S E F G DQHR+MR+DIDNMSYEELLALG+++G V+T LSE+ L
Sbjct: 395 ASIETNLFSS-------GMFRFYDQHRDMRLDIDNMSYEELLALGDKMGTVSTALSEEAL 447
Query: 483 SKCVTETIYCSSDQC-------QDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWL 535
S+ + ++IY +D+ D+ C IC EEY + D++GT+ C H YHVSC+++WL
Sbjct: 448 SRSLKQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDELGTI-PCQHMYHVSCVQQWL 506
Query: 536 SMKKLCPICKSSALPE 551
MK CPICK+SA E
Sbjct: 507 RMKNWCPICKTSAEEE 522
>emb|CAE02518.2| OSJNBb0003A12.5 [Oryza sativa (japonica cultivar-group)]
gi|50930339|ref|XP_474697.1| OSJNBb0003A12.5 [Oryza
sativa (japonica cultivar-group)]
Length = 684
Score = 125 bits (313), Expect = 5e-27
Identities = 65/127 (51%), Positives = 83/127 (65%), Gaps = 7/127 (5%)
Query: 426 EVPGFMIVERASLYGSRNVLDQHREMRMDIDNMSYEELLALGERIGQVNTGLSEDVLSKC 485
E P F ERA +++D+HR+MR+D+DNMSYEELLALGERIG VNTGLSED +
Sbjct: 560 EDPNF---ERALFARRASLIDRHRDMRLDVDNMSYEELLALGERIGYVNTGLSEDKIRTG 616
Query: 486 VTETIYCS---SDQCQDEGSCVICLEEYKNMDDVGTLKTCGHDYHVSCIKKWLSMKKLCP 542
+ + Y S + C IC EEY +D+G L CGHD+H +CIK+WL +K LCP
Sbjct: 617 LKQWKYVSIPIEEPLTGVEPCCICQEEYAEGEDMGRL-DCGHDFHTACIKQWLVIKNLCP 675
Query: 543 ICKSSAL 549
ICK + L
Sbjct: 676 ICKKTGL 682
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.313 0.128 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,007,517,258
Number of Sequences: 2540612
Number of extensions: 44080045
Number of successful extensions: 106354
Number of sequences better than 10.0: 2220
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 1114
Number of HSP's that attempted gapping in prelim test: 103853
Number of HSP's gapped (non-prelim): 2661
length of query: 556
length of database: 863,360,394
effective HSP length: 133
effective length of query: 423
effective length of database: 525,458,998
effective search space: 222269156154
effective search space used: 222269156154
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)
Medicago: description of AC124963.24