BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124963.19 - phase: 0 /pseudo
(206 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM64271.1| unknown [Arabidopsis thaliana] gi|18412879|ref|NP... 43 0.005
ref|NP_989989.1| DNA-dependent protein kinase catalytic subunit ... 37 0.27
dbj|BAB91148.1| DNA-dependent protein kinase catalytic subunit [... 37 0.27
emb|CAG88111.1| unnamed protein product [Debaryomyces hansenii C... 37 0.35
dbj|BAA95444.1| alpha/beta hydroxylase [Danio rerio] 37 0.45
ref|XP_393319.1| PREDICTED: similar to ENSANGP00000010053 [Apis ... 37 0.45
ref|XP_623477.1| PREDICTED: similar to ENSANGP00000028604 [Apis ... 37 0.45
dbj|BAD98727.1| Tsukushi [Mus musculus] gi|67972425|ref|NP_00101... 36 0.59
gb|AAO51915.1| similar to Dictyostelium discoideum (Slime mold).... 36 0.59
ref|XP_643082.1| hypothetical protein DDB0217795 [Dictyostelium ... 36 0.59
dbj|BAC29069.1| unnamed protein product [Mus musculus] 36 0.59
ref|YP_143236.1| unknown [Acanthamoeba polyphaga mimivirus] gi|5... 36 0.77
ref|NP_001009965.1| hepatic protein EIIH [Rattus norvegicus] gi|... 35 1.0
ref|XP_579321.1| PREDICTED: hepatic protein EIIH [Rattus norvegi... 35 1.0
gb|EAK97108.1| likely protein kinase [Candida albicans SC5314] 35 1.3
gb|EAL03238.1| hypothetical protein CaO19.11426 [Candida albican... 35 1.7
ref|XP_555719.1| ENSANGP00000028604 [Anopheles gambiae str. PEST... 35 1.7
gb|AAA27922.2| Hypothetical protein C02F5.7a [Caenorhabditis ele... 34 2.2
ref|NP_342602.1| Protease related protein [Sulfolobus solfataric... 34 2.2
gb|EAM74981.1| similar to ABC-type uncharacterized transport sys... 34 2.2
>gb|AAM64271.1| unknown [Arabidopsis thaliana] gi|18412879|ref|NP_565242.1|
leucine-rich repeat family protein [Arabidopsis
thaliana] gi|25406681|pir||E96838 hypothetical protein
T21F11.4 [imported] - Arabidopsis thaliana
gi|6730724|gb|AAF27114.1| hypothetical protein;
8015-9751 [Arabidopsis thaliana]
Length = 578
Score = 43.1 bits (100), Expect = 0.005
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 13 LVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREI 72
L C VG S D+ +I +F +LE LD+ +PN + +I LS + + +I
Sbjct: 112 LKCYGVGGFSDSDLVSIGVNFPLLEKLDISYPN---SSPSRVSDSGVIELSSNLKGLLKI 168
Query: 73 NLSSHSYISDNLFHNLLYNWRHNLEEVFICNCPNITHGIIFNSFSFPDAPPRVKSLVLSD 132
N+S +S+I+D L N L E+ +C I+ I F ++ ++SL ++
Sbjct: 169 NISGNSFITDKSLIALSQNCL-LLREIIFRDCDFISSDCI--KFVLRNS-RNLESLAING 224
Query: 133 TGL--SQPNIPQPY-FLNSLTTIKLFSCNISNQFLSSI--KVLPLHTLLL 177
GL + + + F LT + L +S+ L I LPL LLL
Sbjct: 225 IGLRPRESLLTDAFLFARCLTELDLSDSFLSDDLLCLIASAKLPLKKLLL 274
>ref|NP_989989.1| DNA-dependent protein kinase catalytic subunit [Gallus gallus]
gi|11761137|dbj|BAA36956.1| DNA-dependent protein kinase
catalytic subunit [Gallus gallus]
Length = 4133
Score = 37.4 bits (85), Expect = 0.27
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 79 YISDNLFHNLLYNWRHNLE---EVFIC--NCPNITHGIIFNSFSFPDAPPRVKSLVLSDT 133
++ N FH +RHNLE V C NC +I + +IF FS D + S+ +
Sbjct: 2216 FLMKNAFHQKRAVFRHNLEIIKTVIECWKNCLSIPYSLIFEKFSSGDPDTKDNSVGIQLL 2275
Query: 134 GLSQPNIPQPYFLN-SLTTIKLFSCNISNQFLSSIK-VLPLHTLLLGIHLSW 183
G+ N P+ L + ++ F +SN L K V +LG+ L +
Sbjct: 2276 GIVLANNLPPFDLKCEIDRVRYFQALVSNMGLLRYKEVYAAAAEVLGLALQY 2327
>dbj|BAB91148.1| DNA-dependent protein kinase catalytic subunit [Gallus gallus]
Length = 4134
Score = 37.4 bits (85), Expect = 0.27
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Query: 79 YISDNLFHNLLYNWRHNLE---EVFIC--NCPNITHGIIFNSFSFPDAPPRVKSLVLSDT 133
++ N FH +RHNLE V C NC +I + +IF FS D + S+ +
Sbjct: 2217 FLMKNAFHQKRAVFRHNLEIIKTVIECWKNCLSIPYSLIFEKFSSGDPDTKDNSVGIQLL 2276
Query: 134 GLSQPNIPQPYFLN-SLTTIKLFSCNISNQFLSSIK-VLPLHTLLLGIHLSW 183
G+ N P+ L + ++ F +SN L K V +LG+ L +
Sbjct: 2277 GIVLANNLPPFDLKCEIDRVRYFQALVSNMGLLRYKEVYAAAAEVLGLALQY 2328
>emb|CAG88111.1| unnamed protein product [Debaryomyces hansenii CBS767]
gi|50422597|ref|XP_459870.1| unnamed protein product
[Debaryomyces hansenii]
Length = 519
Score = 37.0 bits (84), Expect = 0.35
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 18 VGSMSRQDISAISRSFQMLEVLDLG--HPNLFVDGAHPNTAKALINLSLSTPRMREINLS 75
+GS+ D+S ++ F L+ LDL H + VD P + + + + + + +
Sbjct: 172 LGSVINIDLSYVATLFDSLQCLDLNDFHQHSKVDYL-PQSVENFVFKDVQLNGKKLPDNT 230
Query: 76 SHSYISDNLFHNLLYNWRHNLEEVFICNCPNITHGIIFNSFSFPDAPPRVKSLVLSDTGL 135
+ ++ F+N L +EE+ +CN P I++ ++ N S + SLVL L
Sbjct: 231 KSLRLKNSTFNNCLGVRLPVIEELALCNIPEISNFVLQNWSS------TLVSLVLDSVEL 284
Query: 136 SQPNIPQPYFLNSLTTIKLFSCNISNQFLSSIKVLPLHTLL 176
N+ + L++L +KL ++SN+F K PL LL
Sbjct: 285 KVDNL-KLRELHNLERLKLI--DLSNEFGYGFKCPPLLHLL 322
>dbj|BAA95444.1| alpha/beta hydroxylase [Danio rerio]
Length = 344
Score = 36.6 bits (83), Expect = 0.45
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 15/145 (10%)
Query: 20 SMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALI-NLSLSTPRMREINLSSHS 78
S++++ I+ F D P+ + + +AL+ +L LS R IN+ SH
Sbjct: 100 SLTQRFNRVIALDFLGFGFSDKPRPHRYSIFEQASVVEALVAHLGLSEQR---INILSHD 156
Query: 79 YISDNLFHNLLYNWRHNLEEVFICNCPNITHGIIFNSFSFPDAPPRVKSLVLSDTGLSQP 138
Y D + LLY HN I N +++G IF + PR VL D+G P
Sbjct: 157 Y-GDTVALELLYRSDHNRSGHIIVNSLCLSNGGIFPETHY----PRFLQKVLKDSGFISP 211
Query: 139 NIPQPYFLNSLTTIKLFSCNISNQF 163
L L +LFS I F
Sbjct: 212 ------VLTRLMNFQLFSRGIKEVF 230
>ref|XP_393319.1| PREDICTED: similar to ENSANGP00000010053 [Apis mellifera]
Length = 435
Score = 36.6 bits (83), Expect = 0.45
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 8 PFLTSLVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTP 67
P L+ L C + A++++ ++LE +DL L D LI+LS+ P
Sbjct: 271 PLLSVLECVACTHFTDAGFQALAKNCRLLEKMDLEECLLITDAT-------LIHLSMGCP 323
Query: 68 RMREINLSSHSYISDNLFHNLLYN--WRHNLEEVFICNCPNIT 108
R+ +++LS I+D L + +L + + NCP IT
Sbjct: 324 RLEKLSLSHCELITDEGIRQLALSPCAAEHLAVLELDNCPLIT 366
>ref|XP_623477.1| PREDICTED: similar to ENSANGP00000028604 [Apis mellifera]
Length = 259
Score = 36.6 bits (83), Expect = 0.45
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 8 PFLTSLVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTP 67
P L+ L C + A++++ ++LE +DL L D LI+LS+ P
Sbjct: 95 PLLSVLECVACTHFTDAGFQALAKNCRLLEKMDLEECLLITDAT-------LIHLSMGCP 147
Query: 68 RMREINLSSHSYISDNLFHNLLYN--WRHNLEEVFICNCPNIT 108
R+ +++LS I+D L + +L + + NCP IT
Sbjct: 148 RLEKLSLSHCELITDEGIRQLALSPCAAEHLAVLELDNCPLIT 190
>dbj|BAD98727.1| Tsukushi [Mus musculus] gi|67972425|ref|NP_001019790.1| tsukushi
[Mus musculus]
Length = 354
Score = 36.2 bits (82), Expect = 0.59
Identities = 27/73 (36%), Positives = 38/73 (51%), Gaps = 11/73 (15%)
Query: 27 SAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREINLSS---------- 76
SA SR + LE LDL H L A T+ L +++LS R+RE+++S+
Sbjct: 103 SAFSR-LRYLESLDLSHNGLAALPAEIFTSSPLSDINLSHNRLREVSISAFTTHSQGRAL 161
Query: 77 HSYISDNLFHNLL 89
H +S NL H LL
Sbjct: 162 HVDLSHNLIHRLL 174
>gb|AAO51915.1| similar to Dictyostelium discoideum (Slime mold). Non-receptor
tyrosine kinase spore lysis A (EC 2.7.1.112) (Tyrosine-
protein kinase 1)
Length = 2159
Score = 36.2 bits (82), Expect = 0.59
Identities = 30/114 (26%), Positives = 55/114 (47%), Gaps = 9/114 (7%)
Query: 4 GNSIPFLTSLVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLS 63
G++ L L +N ++ +++IS S + LEV+ L G + + +++L+
Sbjct: 1582 GSTCSQLKKLSLANCINIPSDALNSISMSCKNLEVIIL-------KGCYQLSNPGIVSLA 1634
Query: 64 LSTPRMREINLSSHSYISDNLFHNLLYNWRHNLEEVFICNCPNITHGIIFNSFS 117
P + ++LS I+D H LL N + L + + C N+T G F SF+
Sbjct: 1635 RGCPNLYVVDLSGCMKITDFAIHELLQNCK-QLHTLDLRKCVNLTDG-AFQSFN 1686
>ref|XP_643082.1| hypothetical protein DDB0217795 [Dictyostelium discoideum]
gi|60471255|gb|EAL69218.1| hypothetical protein
DDB0217795 [Dictyostelium discoideum]
Length = 2159
Score = 36.2 bits (82), Expect = 0.59
Identities = 30/114 (26%), Positives = 55/114 (47%), Gaps = 9/114 (7%)
Query: 4 GNSIPFLTSLVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLS 63
G++ L L +N ++ +++IS S + LEV+ L G + + +++L+
Sbjct: 1582 GSTCSQLKKLSLANCINIPSDALNSISMSCKNLEVIIL-------KGCYQLSNPGIVSLA 1634
Query: 64 LSTPRMREINLSSHSYISDNLFHNLLYNWRHNLEEVFICNCPNITHGIIFNSFS 117
P + ++LS I+D H LL N + L + + C N+T G F SF+
Sbjct: 1635 RGCPNLYVVDLSGCMKITDFAIHELLQNCK-QLHTLDLRKCVNLTDG-AFQSFN 1686
>dbj|BAC29069.1| unnamed protein product [Mus musculus]
Length = 372
Score = 36.2 bits (82), Expect = 0.59
Identities = 27/73 (36%), Positives = 38/73 (51%), Gaps = 11/73 (15%)
Query: 27 SAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREINLSS---------- 76
SA SR + LE LDL H L A T+ L +++LS R+RE+++S+
Sbjct: 121 SAFSR-LRYLESLDLSHNGLAALPAEIFTSSPLSDINLSHNRLREVSISAFTTHSQGRAL 179
Query: 77 HSYISDNLFHNLL 89
H +S NL H LL
Sbjct: 180 HVDLSHNLIHRLL 192
>ref|YP_143236.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|55417489|gb|AAV51139.1| unknown [Acanthamoeba
polyphaga mimivirus]
Length = 307
Score = 35.8 bits (81), Expect = 0.77
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 65 STPRMREINLSSHSYISDNLFHN---LLYNWRHNLEEVF----------ICNCPNITHGI 111
S ++ EI + H+ IS + N ++ +H+L+ +F ICN ++T
Sbjct: 169 SNEKLDEITIMKHNIISIHYISNEKFIIITKKHSLKYIFNSQHYVAIRNICNKESVTIAN 228
Query: 112 IFNSFSFPDAPPRVKSLVLSDTGLSQPNIPQPYFLNSLTTIKLFSCNISNQFLSSI 167
N F P R +VL ++G+ NI P + T K F C+ NQ+L I
Sbjct: 229 FGNVIKFFYCPTRNYLVVLKESGI---NIINP---ETGKTKKKFVCDTINQYLFDI 278
>ref|NP_001009965.1| hepatic protein EIIH [Rattus norvegicus] gi|45479292|gb|AAS66683.1|
hepatic protein EIIH [Rattus norvegicus]
Length = 353
Score = 35.4 bits (80), Expect = 1.0
Identities = 26/73 (35%), Positives = 38/73 (51%), Gaps = 11/73 (15%)
Query: 27 SAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREINLSS---------- 76
+A SR + LE LDL H L A T+ L +++LS R+RE+++S+
Sbjct: 103 TAFSR-LRYLESLDLSHNGLAALPAEVFTSSPLSDINLSHNRLREVSISAFTTHSQGRAL 161
Query: 77 HSYISDNLFHNLL 89
H +S NL H LL
Sbjct: 162 HVDLSHNLIHRLL 174
>ref|XP_579321.1| PREDICTED: hepatic protein EIIH [Rattus norvegicus]
Length = 353
Score = 35.4 bits (80), Expect = 1.0
Identities = 26/73 (35%), Positives = 38/73 (51%), Gaps = 11/73 (15%)
Query: 27 SAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREINLSS---------- 76
+A SR + LE LDL H L A T+ L +++LS R+RE+++S+
Sbjct: 103 TAFSR-LRYLESLDLSHNGLAALPAEVFTSSPLSDINLSHNRLREVSISAFTTHSQGRAL 161
Query: 77 HSYISDNLFHNLL 89
H +S NL H LL
Sbjct: 162 HVDLSHNLIHRLL 174
>gb|EAK97108.1| likely protein kinase [Candida albicans SC5314]
Length = 1323
Score = 35.0 bits (79), Expect = 1.3
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 22 SRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREINLSSHSYIS 81
SR+ S+ +++ +++DL +L + A L +LSLSTP + S+H
Sbjct: 292 SRKTSSSKNKNDDFKDIIDLLENDLSALLDNSEVATTLHDLSLSTPDNLDDTNSNH---- 347
Query: 82 DNLFHNLLYNWRHNLEEVFICNCPNITHGIIFNSFSFPDAPPRVKSLVLSDTGLSQPNIP 141
D L H LL H L FI N T + F+ S P + L N
Sbjct: 348 DILKHKLL----HALAMPFIENSVQPTSLLEFDGTSDPSLNSSHVRPSTTALNLLNNNYD 403
Query: 142 QPYFLNSLTTIKLFSCNISNQFLSSIKVLPLHTLLLGIH 180
+P N F+ N +N F +S P H+LL H
Sbjct: 404 EPPAKNR------FNNNNNNNFKNSAASRPFHSLLTTKH 436
>gb|EAL03238.1| hypothetical protein CaO19.11426 [Candida albicans SC5314]
gi|46443795|gb|EAL03074.1| hypothetical protein
CaO19.3944 [Candida albicans SC5314]
Length = 780
Score = 34.7 bits (78), Expect = 1.7
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 27/152 (17%)
Query: 2 AFGNSIPFLTSLVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVD------------ 49
A N+ P L L G++S + I + RS ML+ + D
Sbjct: 251 ALANNCPRLQGLYAPGCGNVSEEAIIKLLRSCPMLKRVKFNSSTNITDESILVMYENCKS 310
Query: 50 -------GAHPNTAKALINLSLSTPRMREINLSSHSYISDNLFHNLLYNWRHNLEE---V 99
G T K L ++ L ++RE +S+ I+D LF ++ H LE+ +
Sbjct: 311 LVEIDLHGCENVTDKYLKSIFLDLTQLREFRISNAPGITDKLFESIPEG--HILEKLRII 368
Query: 100 FICNCPNITHGIIFNSFSFPDAPPRVKSLVLS 131
I C IT ++ S PR++++VLS
Sbjct: 369 DITGCNAITDRLVEKLVS---CAPRLRNVVLS 397
>ref|XP_555719.1| ENSANGP00000028604 [Anopheles gambiae str. PEST]
gi|55237908|gb|EAL39733.1| ENSANGP00000028604 [Anopheles
gambiae str. PEST]
Length = 250
Score = 34.7 bits (78), Expect = 1.7
Identities = 27/109 (24%), Positives = 47/109 (42%), Gaps = 9/109 (8%)
Query: 2 AFGNSIPFLTSLVCSNVGSMSRQDISAISRSFQMLEVLDLGHPNLFVDGAHPNTAKALIN 61
A + P+L +L + + A++++ + LE +DL +L D L N
Sbjct: 81 ALSDGCPYLNTLEVAGCAQFTDSGFIALAKNCKYLERMDLEECSLITDA-------TLQN 133
Query: 62 LSLSTPRMREINLSSHSYISDNLFHNLLYNW--RHNLEEVFICNCPNIT 108
L+L P + ++ LS I+D L +L + + NCP IT
Sbjct: 134 LALGCPSLEKLTLSHCELITDEGIRQLAGGGCAAESLSVLELDNCPLIT 182
>gb|AAA27922.2| Hypothetical protein C02F5.7a [Caenorhabditis elegans]
gi|21431858|sp|P34284|YKK7_CAEEL Hypothetical
F-box/LRR-repeat protein C02F5.7
gi|25151694|ref|NP_741249.1| rad-51 (Fifty one) like,
Short RFS-1, f-box protein Fbl2 (51.6 kD) (rfs-1Co)
[Caenorhabditis elegans]
Length = 461
Score = 34.3 bits (77), Expect = 2.2
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 29 ISRSFQMLEVLDLGHPNLFVDGAHPNTAKALINLSLSTPRMREINLSSHSYISDNLFHNL 88
++R + LE LD+ +L D +T +L N + +RE++LS I+D NL
Sbjct: 326 LARGCRQLERLDMEDCSLISD----HTINSLAN---NCTALRELSLSHCELITDESIQNL 378
Query: 89 LYNWRHNLEEVFICNCPNIT 108
R L + + NCP +T
Sbjct: 379 ASKHRETLNVLELDNCPQLT 398
>ref|NP_342602.1| Protease related protein [Sulfolobus solfataricus P2]
gi|13814328|gb|AAK41392.1| Protease related protein
[Sulfolobus solfataricus P2] gi|25375878|pir||A90267
proteinase related protein [imported] - Sulfolobus
solfataricus
Length = 1269
Score = 34.3 bits (77), Expect = 2.2
Identities = 33/118 (27%), Positives = 48/118 (39%), Gaps = 6/118 (5%)
Query: 45 NLFVDGAHPNTAKALINLSLSTPRMREINLSSHSYISDNLFHNLLYNWRHNLEEVFICNC 104
N+ + G +P INL S +N++ + D N+ N NL F N
Sbjct: 1112 NIHIQGLYPELPSISINLP-SKNVTGTVNVTVNVIGEDVSRINVYLNG--NLINSFTTNG 1168
Query: 105 PNITHGIIFNSFSFPDAPPRVKSLVLSDTGLSQPNIPQPYFLNSLTTIKLFSCNISNQ 162
TH + N+ ++PD + + GLS N YF N LT + ISNQ
Sbjct: 1169 ---THIVTINTQNYPDGGYNLTVTAIQSDGLSSSNSSYLYFENGLTNLNTKVNVISNQ 1223
>gb|EAM74981.1| similar to ABC-type uncharacterized transport system permease
component [Kineococcus radiotolerans SRS30216]
gi|46104347|ref|ZP_00199059.1| COG4587: ABC-type
uncharacterized transport system, permease component
[Kineococcus radiotolerans SRS30216]
Length = 264
Score = 34.3 bits (77), Expect = 2.2
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 133 TGLSQPNIPQPYFLNSLTTIKLFSCNISNQFLSSIK---------VLPLHTLL------L 177
TGLS P P PY L L T S + + ++L ++ VL L+T+L L
Sbjct: 131 TGLSLPGAPAPYVLGLLCTAVAVSVSFAARWLVNLTAFWLTEIRGVLVLYTVLATVLTGL 190
Query: 178 GIHLSWFVRLLISAASNPPF 197
+ ++WF L S A+ PF
Sbjct: 191 AVPVAWFPPWLGSLAAATPF 210
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 353,390,305
Number of Sequences: 2540612
Number of extensions: 13659156
Number of successful extensions: 40697
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 40669
Number of HSP's gapped (non-prelim): 65
length of query: 206
length of database: 863,360,394
effective HSP length: 122
effective length of query: 84
effective length of database: 553,405,730
effective search space: 46486081320
effective search space used: 46486081320
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 72 (32.3 bits)
Medicago: description of AC124963.19