BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124952.8 - phase: 0 /pseudo
(819 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB51067.1| putative protein [Arabidopsis thaliana] gi|74520... 784 0.0
gb|AAK64034.1| unknown protein [Arabidopsis thaliana] 580 e-164
ref|NP_566899.1| expressed protein [Arabidopsis thaliana] 580 e-164
gb|AAV59378.1| unknown protein [Oryza sativa (japonica cultivar-... 443 e-123
ref|XP_483073.1| hypothetical protein [Oryza sativa (japonica cu... 106 3e-21
ref|XP_483074.1| hypothetical protein [Oryza sativa (japonica cu... 48 0.001
ref|NP_757567.1| hypothetical protein MYPE1800 [Mycoplasma penet... 39 0.91
ref|XP_311979.2| ENSANGP00000011105 [Anopheles gambiae str. PEST... 37 2.0
ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes s... 37 2.6
ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes... 37 2.6
gb|AAP07834.1| Transporter, Drug/Metabolite Exporter family [Bac... 37 3.4
ref|NP_470894.1| relA [Listeria innocua Clip11262] gi|16414045|e... 37 3.4
ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocyto... 37 3.4
ref|XP_647145.1| hypothetical protein DDB0189387 [Dictyostelium ... 37 3.4
dbj|BAB60670.1| Rel [Listeria monocytogenes] 37 3.4
ref|NP_058903.1| vanilloid receptor-like protein 1 [Rattus norve... 36 4.5
emb|CAH02864.1| unnamed protein product [Kluyveromyces lactis NR... 36 4.5
sp|Q9WUD2|TRPV2_RAT Transient receptor potential cation channel ... 36 4.5
dbj|BAA93435.1| ion channel [Rattus norvegicus] 36 4.5
ref|ZP_00153337.1| COG1294: Cytochrome bd-type quinol oxidase, s... 36 4.5
>emb|CAB51067.1| putative protein [Arabidopsis thaliana] gi|7452052|pir||T13009
hypothetical protein T24C20.80 - Arabidopsis thaliana
Length = 1998
Score = 784 bits (2025), Expect = 0.0
Identities = 444/867 (51%), Positives = 557/867 (64%), Gaps = 88/867 (10%)
Query: 24 GLLSVNACNLLVYGAGQVIPSSFKILKPNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIA 83
G SVN+C+LLVYGAGQVIPSSF +L L YSLLV LS QY R +LVM+K+ C+DIA
Sbjct: 154 GCSSVNSCDLLVYGAGQVIPSSFTVLDQYLRYSLLVGLSPDAQYGRIVLVMNKSVCSDIA 213
Query: 84 GNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATNDHNKLKVYLYFSA 143
GN+F R S ++H DRR V VN+RTHVPEKL+++N++TRTVQATND+NKL VYLYFS
Sbjct: 214 GNNFKRALGSRFFVHFDRRNVLVNLRTHVPEKLLKLNNQTRTVQATNDNNKLNVYLYFSE 273
Query: 144 PVLNSSTEIMNSLKVSQGSLLPTSAENLGNRRFGFMIANISSTAIISVNFNSKSIITRQG 203
PVLNSS EI+ L +QG LLP GNRRF FM+ N S AI++V +S SI +R G
Sbjct: 274 PVLNSSAEILRRLNTNQGDLLPIDGNTNGNRRFAFMVTNTSRRAIVTVTLDSNSIRSRHG 333
Query: 204 TQVSPNAPFT---------------------------------------N*NGAHTLLSY 224
T SP AP T N N A +L
Sbjct: 334 TPASPTAPLTFLYGDFEELSGSIYIVYVKANTSTLSIKIPENVTQDVAGNKNLASNILKV 393
Query: 225 KQMMILYLSVFQRT*LMMLLETKI*LPMFYK*GT-TISTASLQSVDTFTRSSSFLIVDPA 283
K + +S ++ + T I L + G T+ST SL S+ F R S +LI DP
Sbjct: 394 KHYSVPMISS-----VISWVTTYIFLVTSFVAGLLTLSTTSLYSLGAFPRPSPYLISDPT 448
Query: 284 RNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQWTIPSFSVPWESGPMSLFMVGSSPF 343
RNLFR CHIQ FAL RWL V PV++YE R +QW IP F +PWE+ MV +SP+
Sbjct: 449 RNLFRTACHIQFFALTRWLPVTLPVDYYELVRGIQWIIPYFPLPWETKIKEQIMVATSPY 508
Query: 344 -GSSSSSAKALATIPNMLLGQNLNY-------------GASVYGSPLTSSEYQQYFERNS 389
G S +K + N+ N + G S+ + S ++ + +S
Sbjct: 509 IGPHSFISKTHNNMINLKTSTNAEWRDFNRIMFWIAIIGGSLVLLHIVLSLILKFKKAHS 568
Query: 390 EKNGTYGALVFPRFEIFLLFLALPGICKASTGLIRG------GAPAAMAVGIILLIFVST 443
EK ++GA VFPRFE+FLL LALP ICKA+ LI+G A A++ VGI++L V+
Sbjct: 569 EKKRSFGAFVFPRFELFLLILALPSICKAARSLIQGYFKHQGAAEASVIVGILVLCVVAI 628
Query: 444 VLLALFMFLSVGITFGKLLQYKEVHHEGETFHWYQELIRVTLGPGKRGQWTWKEKAKSVY 503
+LLALF+FLSVGITFGKLLQYKE+H EG+TFHWYQELIRVTLGPGKRGQWTWK + SVY
Sbjct: 629 LLLALFLFLSVGITFGKLLQYKEIHQEGQTFHWYQELIRVTLGPGKRGQWTWKTE-NSVY 687
Query: 504 LTIFGPLFEDLRGPPKYMLSQISGGSQ-PSQNDHIIVSDDETEDAEAPFIQKLFGILRIY 562
LT GP+FEDLRGPPKYML+QISG + Q+D II SDDE EDAEAP IQKLFGILRIY
Sbjct: 688 LTRLGPVFEDLRGPPKYMLTQISGSNPLKQQDDRIIASDDENEDAEAPCIQKLFGILRIY 747
Query: 563 FVFLESIRRVSLGILAGVFIHTRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKVQLVE 622
+ FLE+++RV LGI+AG F+ ++++K+PI+++LSITSF LFF++LKKPFIKKKVQLVE
Sbjct: 748 YTFLETVKRVCLGIIAGAFLD--NETAKTPIVVLLSITSFQLFFLLLKKPFIKKKVQLVE 805
Query: 623 IISLTCEVAFFATCFVLLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEWYALYAQTKLL 682
IIS+ C+V FA+C +LL KDF + K GIFM+VLFL+G+ + NEWY+LY QTK L
Sbjct: 806 IISIACQVGVFASCLMLLAKDFPEASGKKLGIFMVVLFLIGFIMLMCNEWYSLYKQTKRL 865
Query: 683 DPEEKSLFRGLKVASIGFVLYFIPQKWIKN------LEKKLPQNGHANSETRDNALIAER 736
D +S GLK+ IG +PQK IKN LE + NG E R
Sbjct: 866 DQINRSFLSGLKMFIIGLAALILPQKMIKNKIPVAQLEARSSSNGGTTPEFRYR------ 919
Query: 737 CMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQI-TDPSTSSTTRWSGFWGNKRSGS 795
SGSRSSG+ D PWLK++RE+AK SF++DRS ++ +DPS S + S WG K SGS
Sbjct: 920 -NSSGSRSSGSLDKPWLKQIREMAKSSFTRDRSNSKVPSDPSCSKSGWSSSIWGTKTSGS 978
Query: 796 ----SSSDYKPKPKKALDEDLEAIFAS 818
SS+DYK +P K L +DLEAIFAS
Sbjct: 979 SSKESSADYKSRP-KGLYKDLEAIFAS 1004
>gb|AAK64034.1| unknown protein [Arabidopsis thaliana]
Length = 1088
Score = 580 bits (1495), Expect = e-164
Identities = 327/632 (51%), Positives = 407/632 (63%), Gaps = 85/632 (13%)
Query: 259 TISTASLQSVDTFTRSSSFLIVDPARNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQ 318
T+ST SL S+ F R S +LI DP RNLFR CHIQ FAL RWL V PV++YE R +Q
Sbjct: 471 TLSTTSLYSLGAFPRPSPYLISDPTRNLFRTACHIQFFALTRWLPVTLPVDYYELVRGIQ 530
Query: 319 WTIPSFSVPWESGPMSLFMVGSSPF-GSSSSSAKALATIPNMLLGQNLNYGASVYGSPLT 377
W IP F +PWE+ MV +SP+ G S +K + N+ N SV+G PLT
Sbjct: 531 WIIPYFPLPWETKIKEQIMVATSPYIGPHSFISKTHNNMINLKTSTNAE---SVFGLPLT 587
Query: 378 SSEYQQYFERN------------------------------------------------- 388
+ EY+ +FE +
Sbjct: 588 AMEYRLFFETSNLKPEAEHVLGLPHSTVWRDFNRIMFWIAIIGGSLVLLHIVLSLILKFK 647
Query: 389 ---SEKNGTYGALVFPRFEIFLLFLALPGICKASTGLIRG------GAPAAMAVGIILLI 439
SEK ++GA VFPRFE+FLL LALP ICKA+ LI+G A A++ VGI++L
Sbjct: 648 KAHSEKKRSFGAFVFPRFELFLLILALPSICKAARSLIQGYFKHQGAAEASVIVGILVLC 707
Query: 440 FVSTVLLALFMFLSVGITFGKLLQYKEVHHEGETFHWYQELIRVTLGPGKRGQWTWKEKA 499
V+ +LLALF+FLSVGITFGKLLQYKE+H EG+TFHWYQELIRVTLGPGKRGQWTWK +
Sbjct: 708 VVAILLLALFLFLSVGITFGKLLQYKEIHQEGQTFHWYQELIRVTLGPGKRGQWTWKTE- 766
Query: 500 KSVYLTIFGPLFEDLRGPPKYMLSQISGGSQ-PSQNDHIIVSDDETEDAEAPFIQKLFGI 558
SVYLT GP+FEDLRGPPKYML+QISG + Q+D II SDDE EDAEAP IQKLFGI
Sbjct: 767 NSVYLTRLGPVFEDLRGPPKYMLTQISGSNPLKQQDDRIIASDDENEDAEAPCIQKLFGI 826
Query: 559 LRIYFVFLESIRRVSLGILAGVFIHTRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKV 618
LRIY+ FLE+++RV LGI+AG F+ ++++K+PI+++LSITSF LFF++LKKPFIKKKV
Sbjct: 827 LRIYYTFLETVKRVCLGIIAGAFLD--NETAKTPIVVLLSITSFQLFFLLLKKPFIKKKV 884
Query: 619 QLVEIISLTCEVAFFATCFVLLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEWYALYAQ 678
QLVEIIS+ C+V FA+C +LL KDF + K GIFM+VLFL+G+ + NEWY+LY Q
Sbjct: 885 QLVEIISIACQVGVFASCLMLLAKDFPKASGKKLGIFMVVLFLIGFIMLMCNEWYSLYKQ 944
Query: 679 TKLLDPEEKSLFRGLKVASIGFVLYFIPQKWIKN------LEKKLPQNGHANSETRDNAL 732
TK LD +S GLK+ IG +PQK IKN LE + NG E R
Sbjct: 945 TKRLDQINRSFLSGLKMFIIGLAALILPQKMIKNKIPVAQLEARSSSNGGTTPEFRYR-- 1002
Query: 733 IAERCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQI-TDPSTSSTTRWSGFWGNK 791
SGSRSSG+ D PWLK++RE+AK SF++DRS ++ +DPS S + S WG K
Sbjct: 1003 -----NSSGSRSSGSLDKPWLKQIREMAKSSFTRDRSNSKVPSDPSCSKSGWSSSIWGTK 1057
Query: 792 RSGS----SSSDYKPKPKKALDEDLEAIFASK 819
SGS SS+DYK +P K L +DLEAIFASK
Sbjct: 1058 TSGSSSKESSADYKSRP-KGLYKDLEAIFASK 1088
Score = 232 bits (591), Expect = 4e-59
Identities = 115/190 (60%), Positives = 139/190 (72%)
Query: 24 GLLSVNACNLLVYGAGQVIPSSFKILKPNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIA 83
G SVN+C+LLVYGAGQVIPSSF +L L YSLLV LS QY R +LVM+K+ C+DIA
Sbjct: 154 GCSSVNSCDLLVYGAGQVIPSSFTVLDQYLRYSLLVGLSPDAQYGRIVLVMNKSVCSDIA 213
Query: 84 GNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATNDHNKLKVYLYFSA 143
GN+F R S ++H DRR V VN+RTHVPEKL+++N++TRTVQATND+NKL VYLYFS
Sbjct: 214 GNNFKRALGSRFFVHFDRRNVLVNLRTHVPEKLLKLNNQTRTVQATNDNNKLNVYLYFSE 273
Query: 144 PVLNSSTEIMNSLKVSQGSLLPTSAENLGNRRFGFMIANISSTAIISVNFNSKSIITRQG 203
PVLNSS EI+ L +QG LLP GNRRF FM+ N S AI++V +S SI +R G
Sbjct: 274 PVLNSSAEILRRLNTNQGDLLPIDGNTNGNRRFAFMVTNTSRRAIVTVTLDSNSIRSRHG 333
Query: 204 TQVSPNAPFT 213
T SP AP T
Sbjct: 334 TPASPTAPLT 343
>ref|NP_566899.1| expressed protein [Arabidopsis thaliana]
Length = 1088
Score = 580 bits (1495), Expect = e-164
Identities = 327/632 (51%), Positives = 407/632 (63%), Gaps = 85/632 (13%)
Query: 259 TISTASLQSVDTFTRSSSFLIVDPARNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQ 318
T+ST SL S+ F R S +LI DP RNLFR CHIQ FAL RWL V PV++YE R +Q
Sbjct: 471 TLSTTSLYSLGAFPRPSPYLISDPTRNLFRTACHIQFFALTRWLPVTLPVDYYELVRGIQ 530
Query: 319 WTIPSFSVPWESGPMSLFMVGSSPF-GSSSSSAKALATIPNMLLGQNLNYGASVYGSPLT 377
W IP F +PWE+ MV +SP+ G S +K + N+ N SV+G PLT
Sbjct: 531 WIIPYFPLPWETKIKEQIMVATSPYIGPHSFISKTHNNMINLKTSTNAE---SVFGLPLT 587
Query: 378 SSEYQQYFERN------------------------------------------------- 388
+ EY+ +FE +
Sbjct: 588 AMEYRLFFETSNLKPEAEHVLGLPHSTVWRDFNRIMFWIAIIGGSLVLLHIVLSLILKFK 647
Query: 389 ---SEKNGTYGALVFPRFEIFLLFLALPGICKASTGLIRG------GAPAAMAVGIILLI 439
SEK ++GA VFPRFE+FLL LALP ICKA+ LI+G A A++ VGI++L
Sbjct: 648 KAHSEKKRSFGAFVFPRFELFLLILALPSICKAARSLIQGYFKHQGAAEASVIVGILVLC 707
Query: 440 FVSTVLLALFMFLSVGITFGKLLQYKEVHHEGETFHWYQELIRVTLGPGKRGQWTWKEKA 499
V+ +LLALF+FLSVGITFGKLLQYKE+H EG+TFHWYQELIRVTLGPGKRGQWTWK +
Sbjct: 708 VVAILLLALFLFLSVGITFGKLLQYKEIHQEGQTFHWYQELIRVTLGPGKRGQWTWKTE- 766
Query: 500 KSVYLTIFGPLFEDLRGPPKYMLSQISGGSQ-PSQNDHIIVSDDETEDAEAPFIQKLFGI 558
SVYLT GP+FEDLRGPPKYML+QISG + Q+D II SDDE EDAEAP IQKLFGI
Sbjct: 767 NSVYLTRLGPVFEDLRGPPKYMLTQISGSNPLKQQDDRIIASDDENEDAEAPCIQKLFGI 826
Query: 559 LRIYFVFLESIRRVSLGILAGVFIHTRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKV 618
LRIY+ FLE+++RV LGI+AG F+ ++++K+PI+++LSITSF LFF++LKKPFIKKKV
Sbjct: 827 LRIYYTFLETVKRVCLGIIAGAFLD--NETAKTPIVVLLSITSFQLFFLLLKKPFIKKKV 884
Query: 619 QLVEIISLTCEVAFFATCFVLLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEWYALYAQ 678
QLVEIIS+ C+V FA+C +LL KDF + K GIFM+VLFL+G+ + NEWY+LY Q
Sbjct: 885 QLVEIISIACQVGVFASCLMLLAKDFPEASGKKLGIFMVVLFLIGFIMLMCNEWYSLYKQ 944
Query: 679 TKLLDPEEKSLFRGLKVASIGFVLYFIPQKWIKN------LEKKLPQNGHANSETRDNAL 732
TK LD +S GLK+ IG +PQK IKN LE + NG E R
Sbjct: 945 TKRLDQINRSFLSGLKMFIIGLAALILPQKMIKNKIPVAQLEARSSSNGGTTPEFRYR-- 1002
Query: 733 IAERCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQI-TDPSTSSTTRWSGFWGNK 791
SGSRSSG+ D PWLK++RE+AK SF++DRS ++ +DPS S + S WG K
Sbjct: 1003 -----NSSGSRSSGSLDKPWLKQIREMAKSSFTRDRSNSKVPSDPSCSKSGWSSSIWGTK 1057
Query: 792 RSGS----SSSDYKPKPKKALDEDLEAIFASK 819
SGS SS+DYK +P K L +DLEAIFASK
Sbjct: 1058 TSGSSSKESSADYKSRP-KGLYKDLEAIFASK 1088
Score = 232 bits (591), Expect = 4e-59
Identities = 115/190 (60%), Positives = 139/190 (72%)
Query: 24 GLLSVNACNLLVYGAGQVIPSSFKILKPNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIA 83
G SVN+C+LLVYGAGQVIPSSF +L L YSLLV LS QY R +LVM+K+ C+DIA
Sbjct: 154 GCSSVNSCDLLVYGAGQVIPSSFTVLDQYLRYSLLVGLSPDAQYGRIVLVMNKSVCSDIA 213
Query: 84 GNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATNDHNKLKVYLYFSA 143
GN+F R S ++H DRR V VN+RTHVPEKL+++N++TRTVQATND+NKL VYLYFS
Sbjct: 214 GNNFKRALGSRFFVHFDRRNVLVNLRTHVPEKLLKLNNQTRTVQATNDNNKLNVYLYFSE 273
Query: 144 PVLNSSTEIMNSLKVSQGSLLPTSAENLGNRRFGFMIANISSTAIISVNFNSKSIITRQG 203
PVLNSS EI+ L +QG LLP GNRRF FM+ N S AI++V +S SI +R G
Sbjct: 274 PVLNSSAEILRRLNTNQGDLLPIDGNTNGNRRFAFMVTNTSRRAIVTVTLDSNSIRSRHG 333
Query: 204 TQVSPNAPFT 213
T SP AP T
Sbjct: 334 TPASPTAPLT 343
>gb|AAV59378.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 1098
Score = 443 bits (1140), Expect = e-123
Identities = 269/635 (42%), Positives = 365/635 (57%), Gaps = 93/635 (14%)
Query: 259 TISTASLQSVDTFTRSSSFLIVDPARNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQ 318
T+ST+SL + R S+L+ +P+RNL R+ CHIQVFAL+RWLS+ PVE+YE S+ L+
Sbjct: 483 TVSTSSLLASGVIQRPPSYLVSEPSRNLLRMACHIQVFALSRWLSINLPVEYYELSKGLE 542
Query: 319 WTIPSFSVPWESGPMSLFMVGSS--PFGSSSSSAKALATIPNMLLGQNLNYGASVY---- 372
W+IP +PWE GP + VG S P + S A ++L G ++
Sbjct: 543 WSIPYMRLPWE-GPSADPFVGYSTMPAIAYSEMLDRTALAADVLRRPPAAPGVAMAMPST 601
Query: 373 ----GSPLTSSEYQQYFE------------------------------------------ 386
G PLT+ EY+ FE
Sbjct: 602 SPLDGKPLTAMEYRYLFENQDMKPEAQIIMKLQDLDGWKYFFRNIFWLAVIAAAFLLLHA 661
Query: 387 --------RNSEKNGTYGALVFPRFEIFLLFLALPGICKASTGLIRGGAPAAMAVGIILL 438
R+ + GALVFPR E+ L+ LA+P + +AS LIRGG A +AVGI+L
Sbjct: 662 TLLLYLKLRHRHSHTHVGALVFPRLELMLVILAMPCVSQASAALIRGGTTAGLAVGIVLT 721
Query: 439 IFVSTVLLALFMFLSVGITFGKLLQYKEVHHEGETFHWYQELIRVTLGPGKRGQWTWKEK 498
++ L+AL +FLS+G+T G+LLQYKEVH EG +HWYQE++R TLGPGKRGQWTWK+
Sbjct: 722 GVLTAFLVALLLFLSLGVTTGRLLQYKEVHQEGREYHWYQEIVRRTLGPGKRGQWTWKDP 781
Query: 499 AKSVYLTIFGPLFEDLRGPPKYMLSQISGGSQPSQ-NDHIIVSDDETEDAEAPFIQKLFG 557
A++ L GPLFEDLRGPPKYMLSQI+GGS + + IIVSDDE EDAEAPF+QKLFG
Sbjct: 782 ARTACLVKLGPLFEDLRGPPKYMLSQIAGGSGGKRAAERIIVSDDENEDAEAPFLQKLFG 841
Query: 558 ILRIYFVFLESIRRVSLGILAGVFIHTRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKK 617
ILRIY+ FLES++RV+LGI+AG + SS++ +++L+I SF LFFMVLKKPFIKK+
Sbjct: 842 ILRIYYTFLESVKRVALGIVAGAHA-SSDHSSRAHAVVVLAIASFQLFFMVLKKPFIKKR 900
Query: 618 VQLVEIISLTCEVAFFATCFVLLKKDFSVRTE-TKFGIFMLVLFLVGYCSQIANEWYALY 676
VQLVEI+++ EV FA C L+ S E + G+ ML +F V +Q+ NEW ALY
Sbjct: 901 VQLVEIVAVASEVLVFAACLRLVDSGGSAVAEGSGVGLAMLTVFAVALAAQVCNEWNALY 960
Query: 677 AQTKLLDPEEKSLFRGLKVASIGFVLYFIPQKWI-KNLEKKLPQNGHANSETRDNALIAE 735
Q +LL + +S G K A +G +L +P + + LEK Q +
Sbjct: 961 RQVRLLSSDRRSFVEGAKAAWVGLLLLVLPSSALGEQLEKMKKQQEQPEA---------- 1010
Query: 736 RCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQITDPSTSSTTRWSGFWGNKRSGS 795
+ G GT + WL ++RE+AK SFSK+ G + + +S +R G + S +
Sbjct: 1011 --VALGGGGGGT-ERSWLGQLREMAKASFSKEGQGGE----AEASGSRAKGGSRSMSSVA 1063
Query: 796 SSSDYKPK-----------PKKALDEDLEAIFASK 819
SSSD K K K L +DLEAIF+++
Sbjct: 1064 SSSDSKAKGPENSHSQWSSKSKGLYKDLEAIFSNR 1098
Score = 179 bits (455), Expect = 3e-43
Identities = 88/183 (48%), Positives = 126/183 (68%)
Query: 31 CNLLVYGAGQVIPSSFKILKPNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIAGNSFTRM 90
C+L VYG G+V PSS ++L+P L YS+ V++ + Y R ILVM K FCTD AG+ F R
Sbjct: 174 CHLSVYGPGRVDPSSLQVLRPALQYSVHVTIPPELLYGRLILVMAKGFCTDAAGHHFIRT 233
Query: 91 PNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATNDHNKLKVYLYFSAPVLNSST 150
NS+ + DRR +NI + +PEKL+QI TR V+ATND L+VYL F+ PV+NSS+
Sbjct: 234 ANSTFTLRFDRRSDSMNIGSSIPEKLLQIEGATRVVEATNDDKDLRVYLSFAEPVMNSSS 293
Query: 151 EIMNSLKVSQGSLLPTSAENLGNRRFGFMIANISSTAIISVNFNSKSIITRQGTQVSPNA 210
+I+ +L + L PT+ LGNRRFG+++ S+TA+++V+ + SII+RQGT VS +
Sbjct: 294 QILAALTATDAILTPTNRSTLGNRRFGYLVKRTSNTAVVTVSCDGNSIISRQGTPVSSSE 353
Query: 211 PFT 213
P+T
Sbjct: 354 PYT 356
>ref|XP_483073.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|42408267|dbj|BAD09423.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|42408472|dbj|BAD09652.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 145
Score = 106 bits (265), Expect = 3e-21
Identities = 59/118 (50%), Positives = 74/118 (62%), Gaps = 13/118 (11%)
Query: 410 LALPGICKASTGLIRGGAPAAMAVGIILLIFVSTVLLALFMFLSVGITFGKLLQYKEVHH 469
L LPG+ A A +A GI+L F L+AL +FLS+G+T G+LL YKEVH
Sbjct: 28 LRLPGVGGAHPRRHYDRAGTGLAGGIVLTAF----LVALLLFLSLGVTTGRLLHYKEVH- 82
Query: 470 EGETFHWYQELIRVTLGPGKRGQWTWKEKAKSVYLTIFGPLFEDLRGPPKYMLSQISG 527
QE++R TLGPGKR QWTWK+ A+ +L PLF+DLR PKYMLSQI+G
Sbjct: 83 --------QEIVRRTLGPGKRAQWTWKDPARPAWLVKLSPLFDDLRVSPKYMLSQIAG 132
>ref|XP_483074.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|42408268|dbj|BAD09424.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|42408473|dbj|BAD09653.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 167
Score = 48.1 bits (113), Expect = 0.001
Identities = 26/51 (50%), Positives = 37/51 (71%), Gaps = 3/51 (5%)
Query: 560 RIYFVFLESIRRVSLGILAGVFI--HTRS-QSSKSPIIIMLSITSFMLFFM 607
RIYF F+ES++RV+LGI+A I HT S SS + +++L+I SF LFF+
Sbjct: 65 RIYFTFMESVKRVALGIVASTHIRWHTSSDHSSCANAVVVLAIASFQLFFI 115
>ref|NP_757567.1| hypothetical protein MYPE1800 [Mycoplasma penetrans HF-2]
gi|26453639|dbj|BAC43971.1| conserved hypothetical
protein [Mycoplasma penetrans HF-2]
Length = 512
Score = 38.5 bits (88), Expect = 0.91
Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 46 FKILKPNLMYSLLVSLSSTVQYSRAILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVY 105
FK + + +SL + + ++ N+ D G ++ P + I + +Y
Sbjct: 349 FKYIPEPIKLEFYISLILQISFGDKFNIIP-NYKADSFGLPISQAPGNKADIEVVNDDIY 407
Query: 106 VNIR-THVPEKLVQINSETRTVQATNDHNKLKVYLYFSAPVLNSSTE 151
NI T + K Q+N+ET + + + YL F AP+++ T+
Sbjct: 408 WNIEVTLIKNKFQQLNNETSNIIRHLEEKNQETYLTFVAPIIHQDTQ 454
>ref|XP_311979.2| ENSANGP00000011105 [Anopheles gambiae str. PEST]
gi|55241838|gb|EAA07582.2| ENSANGP00000011105 [Anopheles
gambiae str. PEST]
Length = 455
Score = 37.4 bits (85), Expect = 2.0
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 17/137 (12%)
Query: 3 IILLKSAPMDIKDSLAVLAITGLLSVNACNLL--VYGAGQVIPSSFKILKPNLMYSLLVS 60
IIL+ A + +L ++ GLL+V C LL +Y A V F +KPN
Sbjct: 205 IILMIGATRSSRCALIFFSVCGLLAVTVCWLLSGIYLASAVALGDF-CMKPNDFICSHPK 263
Query: 61 LSSTVQYSRAILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKL---V 117
L VQY+ +C+ + N + N S +H+DR K + T + L +
Sbjct: 264 LKD-VQYT---------YCSTVGTNRYVLRLNES-KVHVDRAKESLETVTSIGMDLYPGI 312
Query: 118 QINSETRTVQATNDHNK 134
QI+S+ + D +K
Sbjct: 313 QISSKVNKINGELDDSK 329
>ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b F2365]
gi|46881020|gb|AAT04317.1| GTP pyrophosphokinase
[Listeria monocytogenes str. 4b F2365]
Length = 738
Score = 37.0 bits (84), Expect = 2.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 71 ILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATN 130
+L+ C + G++ I I R+ N++ PE+L++++ E QA N
Sbjct: 601 LLIRLSRCCNPVPGDAIVGYITKGRGISIHRQDC-PNVQAIEPERLIEVDWEDADSQAKN 659
Query: 131 DHN-KLKVYLYFSAPVLNSSTEIMNSL 156
D+N +++Y Y +LN +++NSL
Sbjct: 660 DYNVDIEIYGYNRNGLLNDILQVINSL 686
>ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
gi|47017201|gb|EAL08048.1| GTP pyrophosphokinase
[Listeria monocytogenes str. 4b H7858]
Length = 724
Score = 37.0 bits (84), Expect = 2.6
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 71 ILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATN 130
+L+ C + G++ I I R+ N++ PE+L++++ E QA N
Sbjct: 587 LLIRLSRCCNPVPGDAIVGYITKGRGISIHRQDC-PNVQAIEPERLIEVDWEDADSQAKN 645
Query: 131 DHN-KLKVYLYFSAPVLNSSTEIMNSL 156
D+N +++Y Y +LN +++NSL
Sbjct: 646 DYNVDIEIYGYNRNGLLNDILQVINSL 672
>gb|AAP07834.1| Transporter, Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579] gi|30019002|ref|NP_830633.1| Transporter,
Drug/Metabolite Exporter family [Bacillus cereus ATCC
14579]
Length = 303
Score = 36.6 bits (83), Expect = 3.4
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 585 RSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKVQLVEIISLTCEVAFFATCFVLLKKDF 644
++ ++ +I L+ S LF ++ F+K+KV ++I+S+ ++FF VLLK DF
Sbjct: 89 KTSATNVGLISTLNAISIALFSVL----FLKEKVNTLQILSMI--LSFFGVILVLLKGDF 142
Query: 645 SVRTETKFG---IFMLVLFLVGYCSQIANEWYALYAQTKLLDPEEKSLFRGL 693
S+ F ++M+ + + ++W TK P +L+ G+
Sbjct: 143 SLLFSLHFNSGDLWMIAAVCIWGIYSVCSKW-----ATKTTTPLMATLYSGI 189
>ref|NP_470894.1| relA [Listeria innocua Clip11262] gi|16414045|emb|CAC96789.1| relA
[Listeria innocua] gi|25289078|pir||AE1627 (p)ppGpp
synthetase homolog relA [imported] - Listeria innocua
(strain Clip11262)
Length = 738
Score = 36.6 bits (83), Expect = 3.4
Identities = 23/87 (26%), Positives = 43/87 (48%), Gaps = 2/87 (2%)
Query: 71 ILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATN 130
+L+ C + G+ I I R+ N++ PE+L++++ E QA N
Sbjct: 601 LLIRLSRCCNPVPGDDIVGYITKGRGISIHRQDC-PNVQAIEPERLIEVDWEDTDSQAKN 659
Query: 131 DHN-KLKVYLYFSAPVLNSSTEIMNSL 156
D+N +++Y Y +LN +++NSL
Sbjct: 660 DYNVDIEIYGYNRNGLLNDILQVINSL 686
>ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocytogenes EGD-e]
gi|16410952|emb|CAC99601.1| relA [Listeria
monocytogenes] gi|47097020|ref|ZP_00234593.1| GTP
pyrophosphokinase [Listeria monocytogenes str. 1/2a
F6854] gi|47014602|gb|EAL05562.1| GTP pyrophosphokinase
[Listeria monocytogenes str. 1/2a F6854]
gi|25289077|pir||AC1265 (p)ppGpp synthetase homolog relA
[imported] - Listeria monocytogenes (strain EGD-e)
Length = 738
Score = 36.6 bits (83), Expect = 3.4
Identities = 23/87 (26%), Positives = 43/87 (48%), Gaps = 2/87 (2%)
Query: 71 ILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATN 130
+L+ C + G+ I I R+ N++ PE+L++++ E QA N
Sbjct: 601 LLIRLSRCCNPVPGDDIVGYITKGRGISIHRQDC-PNVQAIEPERLIEVDWEDADSQAKN 659
Query: 131 DHN-KLKVYLYFSAPVLNSSTEIMNSL 156
D+N +++Y Y +LN +++NSL
Sbjct: 660 DYNVDIEIYGYNRNGLLNDILQVINSL 686
>ref|XP_647145.1| hypothetical protein DDB0189387 [Dictyostelium discoideum]
gi|60475309|gb|EAL73244.1| hypothetical protein
DDB0189387 [Dictyostelium discoideum]
Length = 492
Score = 36.6 bits (83), Expect = 3.4
Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
Query: 321 IPSFSVPWESGPMSLFMVGSSPFGSSSSSAKALATIPNMLLGQNLNYGASVYG-SP--LT 377
+P+ V E S SSP + +A ATIP L +L + S +G SP +T
Sbjct: 254 VPTIIVAKEKQLDSSIKSPSSPLEAFIRIKRAFATIPKELALISLVFFVSWFGFSPFMVT 313
Query: 378 SSEY--QQYFERNSE--KNGTYGALVFPRFEIFLLFLALPGICKASTGLIRGGAPAAMAV 433
++ Y Q F SE K G YG VF F F L G+C I A +A
Sbjct: 314 NTSYFQQNVFNGESEGLKFGFYGQAVFSAVSFFFSFF-LSGLCNIFGEKIIYSASQLIAG 372
Query: 434 GIILLIFV---STVLLALFMFLSVGITF 458
++L V + LA+ + VGI F
Sbjct: 373 ASLILFLVFDHAQPWLAILLTGVVGINF 400
>dbj|BAB60670.1| Rel [Listeria monocytogenes]
Length = 738
Score = 36.6 bits (83), Expect = 3.4
Identities = 23/87 (26%), Positives = 43/87 (48%), Gaps = 2/87 (2%)
Query: 71 ILVMDKNFCTDIAGNSFTRMPNSSVYIHIDRRKVYVNIRTHVPEKLVQINSETRTVQATN 130
+L+ C + G+ I I R+ N++ PE+L++++ E QA N
Sbjct: 601 LLIRLSRCCNPVPGDDIVGYITKGRGISIHRQDC-PNVQAIEPERLIEVDWEDADSQAKN 659
Query: 131 DHN-KLKVYLYFSAPVLNSSTEIMNSL 156
D+N +++Y Y +LN +++NSL
Sbjct: 660 DYNVDIEIYGYNRNGLLNDILQVINSL 686
>ref|NP_058903.1| vanilloid receptor-like protein 1 [Rattus norvegicus]
gi|4589143|gb|AAD26364.1| vanilloid receptor-like
protein 1 [Rattus norvegicus]
Length = 761
Score = 36.2 bits (82), Expect = 4.5
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 11/76 (14%)
Query: 736 RCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQITDPSTSSTTRWSGFWGNKRSGS 795
R + G+R GTPD W RV E+ ++ K T P+ S G GNK++ +
Sbjct: 687 RLLKVGTRGDGTPDERWCFRVEEVNWAAWEK-------TLPTLSEDPSGPGITGNKKNPT 739
Query: 796 SSSDYKPKPKKALDED 811
S KP A +ED
Sbjct: 740 S----KPGKNSASEED 751
>emb|CAH02864.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
gi|50302681|ref|XP_451276.1| unnamed protein product
[Kluyveromyces lactis]
Length = 438
Score = 36.2 bits (82), Expect = 4.5
Identities = 27/114 (23%), Positives = 52/114 (44%), Gaps = 12/114 (10%)
Query: 576 ILAGVFIHTRSQSSKS-PIIIMLSITSFMLFFMVLKKPFIKK---KVQLVEIISLTCEVA 631
+ + +++H S +K + + +SI+ F++ ++L P K Q + IS T +
Sbjct: 288 VASSLYVHKYSHFAKHWHVALFISISMFIVSLLILTNPLNPKFMFAAQYLGGISYTGQTL 347
Query: 632 FFATCFVLLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEWYALYAQTKLLDPE 685
FFA C V+ + D R +VL + S N W++L + + P+
Sbjct: 348 FFAWCNVVCRGDLQERA--------IVLASMNMFSGAVNAWWSLLFYSTSMAPK 393
>sp|Q9WUD2|TRPV2_RAT Transient receptor potential cation channel subfamily V member 2
(TrpV2) (osm-9-like TRP channel 2) (OTRPC2) (Vanilloid
receptor-like protein 1) (VRL-1) (Stretch activated
channel 2B) gi|6635238|dbj|BAA88637.1| stretch activated
channel 2B [Rattus norvegicus]
Length = 761
Score = 36.2 bits (82), Expect = 4.5
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 11/76 (14%)
Query: 736 RCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQITDPSTSSTTRWSGFWGNKRSGS 795
R + G+R GTPD W RV E+ ++ K T P+ S G GNK++ +
Sbjct: 687 RLLKVGTRGDGTPDERWCFRVEEVNWAAWEK-------TLPTLSEDPSGPGITGNKKNPT 739
Query: 796 SSSDYKPKPKKALDED 811
S KP A +ED
Sbjct: 740 S----KPGKNSASEED 751
>dbj|BAA93435.1| ion channel [Rattus norvegicus]
Length = 762
Score = 36.2 bits (82), Expect = 4.5
Identities = 25/76 (32%), Positives = 35/76 (45%), Gaps = 11/76 (14%)
Query: 736 RCMHSGSRSSGTPDIPWLKRVRELAKGSFSKDRSGVQITDPSTSSTTRWSGFWGNKRSGS 795
R + G+R GTPD W RV E+ ++ K T P+ S G GNK++ +
Sbjct: 687 RLLKVGTRGDGTPDERWCFRVEEVNWAAWEK-------TLPTLSEDPSGPGITGNKKNPT 739
Query: 796 SSSDYKPKPKKALDED 811
S KP A +ED
Sbjct: 740 S----KPGKNSASEED 751
>ref|ZP_00153337.1| COG1294: Cytochrome bd-type quinol oxidase, subunit 2 [Rickettsia
rickettsii]
Length = 339
Score = 36.2 bits (82), Expect = 4.5
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 584 TRSQSSKSPIIIMLSITSFMLFFMVLKKPFIKKKVQ-----LVEIISLTCEVAFFATCFV 638
T+ + KS + I+ + FM F+ L PF+ ++ + I L+ A F+
Sbjct: 192 TQDWAYKSALYILFYVALFM-GFVSLWVPFLNNQINHRWFSVPNIYYLSIVPIVTALIFI 250
Query: 639 LLKKDFSVRTETKFGIFMLVLFLVGYCSQIANEW-----YALYAQTKLLDPEEKSL 689
L K + E K I+ ++LFL+GY + W Y + +T PE +SL
Sbjct: 251 KLIKAVKQKKEVKPFIYTILLFLLGYLGLAISIWPYIVPYKVTLETAAAAPESQSL 306
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.325 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,274,902,756
Number of Sequences: 2540612
Number of extensions: 52030183
Number of successful extensions: 168259
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 168207
Number of HSP's gapped (non-prelim): 35
length of query: 819
length of database: 863,360,394
effective HSP length: 136
effective length of query: 683
effective length of database: 517,837,162
effective search space: 353682781646
effective search space used: 353682781646
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)
Medicago: description of AC124952.8