BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC123596.12 - phase: 0
(408 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD32206.1| 60S ribosomal protein L1 [Prunus armeniaca] gi|17... 694 0.0
gb|AAP37854.1| At3g09630 [Arabidopsis thaliana] gi|27311665|gb|A... 684 0.0
gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thal... 677 0.0
emb|CAB86041.1| 60S ribosomal protein-like [Arabidopsis thaliana... 676 0.0
dbj|BAC42280.1| putative 60S ribosomal protein [Arabidopsis thal... 674 0.0
ref|XP_507356.1| PREDICTED OJ1014_E09.28 gene product [Oryza sat... 615 e-175
gb|AAP44673.1| putative 60S ribosomal protein L1 [Oryza sativa (... 599 e-170
gb|AAM91438.1| AT5g02870/F9G14_180 [Arabidopsis thaliana] gi|136... 518 e-145
dbj|BAA78600.1| 60S ribosomal protein L4 [Chlamydomonas sp. HS-5] 470 e-131
gb|AAH43895.1| Rpl-4-prov protein [Xenopus laevis] gi|71066|pir|... 455 e-126
emb|CAA28843.1| unnamed protein product [Xenopus laevis] gi|1327... 455 e-126
gb|AAH67580.1| Ribosomal protein L4 [Danio rerio] gi|29436531|gb... 453 e-126
gb|AAH54956.1| MGC64318 protein [Xenopus laevis] 453 e-126
gb|AAH41744.1| MGC64318 protein [Xenopus laevis] 453 e-126
emb|CAA29796.1| L1a protein [Xenopus laevis] 451 e-125
gb|AAX62435.1| ribosomal protein L4 [Lysiphlebus testaceipes] 450 e-125
emb|CAA28844.1| ribosomal protein L1b (396 AA) [Xenopus laevis] ... 450 e-125
gb|AAA74021.1| ribosomal protein gi|1350686|sp|P49165|RL4_URECA ... 449 e-125
gb|AAP20200.1| ribosomal protein L4 [Pagrus major] 447 e-124
gb|AAH03459.1| Ribosomal protein L4 [Mus musculus] gi|22001911|s... 446 e-124
>gb|AAD32206.1| 60S ribosomal protein L1 [Prunus armeniaca]
gi|17367847|sp|Q9XF97|RL4_PRUAR 60S ribosomal protein L4
(L1)
Length = 408
Score = 694 bits (1792), Expect = 0.0
Identities = 341/408 (83%), Positives = 377/408 (91%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MAAAAAAARPLVT+Q+LE +M+TD T+ +PDVM+ASIRPDIV FVHSNISKNSRQPYA
Sbjct: 1 MAAAAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYA 60
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WHR
Sbjct: 61 VSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHR 120
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
KINVNQKRYAVVSAIAASA+PSLVLARGH+IETVPE PLVV D+ EGVE+T A+KVLKQ
Sbjct: 121 KINVNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQ 180
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+GA++DAEKAKDS IRPGKGKMRNRRYI+RKGPLIVYGT+GAK VKAFRNIPG++I NV
Sbjct: 181 IGAYSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINV 240
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
ERLNLLKLAPGGHLGRFV+WTKSAFEKLDSIYG+FDK SEKK GYVLPR+KMVN+DL RI
Sbjct: 241 ERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARI 300
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
INSDEVQSVV PI++ KRA LKKNPL+ LN ML+LNPYAKTA+RM+LLAEAERVK+KKE
Sbjct: 301 INSDEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKE 360
Query: 361 KFDKKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
K DKKRK +SKEEAS IKAAGKAWY TM+SDSDY EFDNF+KWLGVSQ
Sbjct: 361 KLDKKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408
>gb|AAP37854.1| At3g09630 [Arabidopsis thaliana] gi|27311665|gb|AAO00798.1|
putative 60S ribosomal protein L1 [Arabidopsis thaliana]
gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22
[Arabidopsis thaliana] gi|6682241|gb|AAF23293.1|
putative 60S ribosomal protein L1 [Arabidopsis thaliana]
gi|15232723|ref|NP_187574.1| 60S ribosomal protein L4/L1
(RPL4A) [Arabidopsis thaliana]
gi|17369604|sp|Q9SF40|RL4B_ARATH 60S ribosomal protein
L4-2 (L1)
Length = 406
Score = 684 bits (1764), Expect = 0.0
Identities = 331/405 (81%), Positives = 374/405 (91%)
Query: 4 AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
AAAAARPLVTIQTL+ +MSTD +T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 2 AAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 61
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 62 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 121
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT AIKVLKQ+GA
Sbjct: 122 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 181
Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+VYGT+G+K VKAFRN+PGVE+ +VERL
Sbjct: 182 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERL 241
Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 242 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 301
Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
DE+QSVV PIKKD KRA LKKNPLKNLNVML+LNPYAKTAKRM+LLAEA+RVK+KKEK
Sbjct: 302 DEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLA 361
Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KKRK V+KEEA AIKAAGK+WY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 362 KKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406
>gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana]
Length = 406
Score = 677 bits (1747), Expect = 0.0
Identities = 329/405 (81%), Positives = 373/405 (91%)
Query: 4 AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
AAAAARPLVTIQTL+ ++STD +T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 2 AAAAARPLVTIQTLDGDISTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 61
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAGHQTSAES GTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 62 KAGHQTSAESCGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 121
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT AIKVLKQ+GA
Sbjct: 122 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 181
Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+VYGT+G+K VKAFRN+PGVE+ +VERL
Sbjct: 182 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVERL 241
Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 242 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 301
Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
DE+QSVV PIKKD KRA LKKNPLKNLNVML+LNPYAKTAKRM+LLAEA+RVK+KKEK
Sbjct: 302 DEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKLA 361
Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KKRK V+KEEA AIKAAGK+WY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 362 KKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406
>emb|CAB86041.1| 60S ribosomal protein-like [Arabidopsis thaliana]
gi|22530964|gb|AAM96986.1| 60S ribosomal protein-like
[Arabidopsis thaliana] gi|21387109|gb|AAM47958.1| 60S
ribosomal protein-like protein [Arabidopsis thaliana]
gi|20260072|gb|AAM13383.1| 60S ribosomal protein-like
[Arabidopsis thaliana] gi|17064752|gb|AAL32530.1| 60S
ribosomal protein-like [Arabidopsis thaliana]
gi|15242558|ref|NP_195907.1| 60S ribosomal protein L4/L1
(RPL4D) [Arabidopsis thaliana]
gi|16649033|gb|AAL24368.1| 60S ribosomal protein-like
[Arabidopsis thaliana] gi|15450798|gb|AAK96670.1| 60S
ribosomal protein-like [Arabidopsis thaliana]
gi|25083642|gb|AAN72099.1| 60S ribosomal protein-like
[Arabidopsis thaliana] gi|20143905|sp|P49691|RL4A_ARATH
60S ribosomal protein L4-1 (L1)
Length = 407
Score = 676 bits (1745), Expect = 0.0
Identities = 327/405 (80%), Positives = 370/405 (90%)
Query: 4 AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
A+AAARPLVT+Q L+ +MSTD T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 3 ASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 62
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 63 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 122
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT AIKVLKQ+GA
Sbjct: 123 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 182
Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+V+GT+GAK VKAFRN+PGVE+ +VERL
Sbjct: 183 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERL 242
Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 302
Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
DEVQSVV PIK KRA LKKNPLKNLNVM +LNPYAKTAKRM+LLAEA RVK+KKEK +
Sbjct: 303 DEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKLE 362
Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KKRK+V+KEEA AIKAAGKAWY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 363 KKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407
>dbj|BAC42280.1| putative 60S ribosomal protein [Arabidopsis thaliana]
Length = 407
Score = 674 bits (1739), Expect = 0.0
Identities = 326/405 (80%), Positives = 369/405 (90%)
Query: 4 AAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSR 63
A+AAARPLVT+Q L+ +MSTD T+ +PDVM A +RPDIVNFVH+ IS NSRQPYAVS+
Sbjct: 3 ASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 62
Query: 64 KAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKIN 123
KAGHQTSAESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFAPT+IWR+WHR++N
Sbjct: 63 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 122
Query: 124 VNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGA 183
VN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV D+AE VEKT AIKVLKQ+GA
Sbjct: 123 VNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIGA 182
Query: 184 FADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERL 243
+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+V+GT+GAK VKAFRN+PGVE+ +VERL
Sbjct: 183 YDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVERL 242
Query: 244 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINS 303
NLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEKKKGYVLPRAKMVN+DL RIINS
Sbjct: 243 NLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIINS 302
Query: 304 DEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFD 363
DEVQSVV PIK KRA LKKNPLKNLNVM +LNPYAKTAKRM+LLAEA RVK+KKE +
Sbjct: 303 DEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEMLE 362
Query: 364 KKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KKRK+V+KEEA AIKAAGKAWY TM+SDSDY EFDNF+KWLG SQ
Sbjct: 363 KKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407
>ref|XP_507356.1| PREDICTED OJ1014_E09.28 gene product [Oryza sativa (japonica
cultivar-group)] gi|50934675|ref|XP_476865.1| putative
60S ribosomal protein L4/L1 [Oryza sativa (japonica
cultivar-group)] gi|51978956|ref|XP_507355.1| PREDICTED
OJ1014_E09.28 gene product [Oryza sativa (japonica
cultivar-group)] gi|51978954|ref|XP_507354.1| PREDICTED
OJ1014_E09.28 gene product [Oryza sativa (japonica
cultivar-group)] gi|51963300|ref|XP_506197.1| PREDICTED
OJ1014_E09.28 gene product [Oryza sativa (japonica
cultivar-group)] gi|34393487|dbj|BAC83047.1| putative
60S ribosomal protein L4/L1 [Oryza sativa (japonica
cultivar-group)]
Length = 405
Score = 615 bits (1586), Expect = e-175
Identities = 291/404 (72%), Positives = 352/404 (87%)
Query: 5 AAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRK 64
A RPLV+++ LE +M+TD+ ++L + +V RA +RPD+V FVH +S N RQPYAVSR+
Sbjct: 2 ATQTRPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRR 61
Query: 65 AGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINV 124
AGHQTSAESWGTGRAVSRIPRV GGGTHRAGQ AFGNMCRGGRMFAPT+ WRKWHR++NV
Sbjct: 62 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNV 121
Query: 125 NQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAF 184
+ +R AV SA+AA+++PSLVLARGHRIETVPE PLV+ D+AE +EKT +AIK+LKQVGA+
Sbjct: 122 HLRRVAVASALAATSVPSLVLARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAY 181
Query: 185 ADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLN 244
ADAEKAKDS+GIRPGKGKMRNRRYI+RKGPLIVYGT+G+K VKAFRN+PGV++ NVERLN
Sbjct: 182 ADAEKAKDSVGIRPGKGKMRNRRYINRKGPLIVYGTEGSKIVKAFRNLPGVDVANVERLN 241
Query: 245 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSD 304
LL LAPGGHLGRFVIWT+SAF+KL+ +YGTF+ S KKKG++LPR KM N+DL RIINSD
Sbjct: 242 LLDLAPGGHLGRFVIWTESAFKKLEEVYGTFEAPSLKKKGFILPRPKMANADLGRIINSD 301
Query: 305 EVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDK 364
EVQSVV+P+ K+VKR +KNPLKN+ +L+LNPY TA++MA LAEA R+K++KEK D
Sbjct: 302 EVQSVVKPLNKEVKRREKRKNPLKNVAAVLKLNPYFGTARKMATLAEAARIKARKEKLDS 361
Query: 365 KRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KR +S EEA+ +KAAGKAWY TM+SDSDYAEFDNFSKWLGV+Q
Sbjct: 362 KRTKLSPEEAAKVKAAGKAWYKTMISDSDYAEFDNFSKWLGVTQ 405
>gb|AAP44673.1| putative 60S ribosomal protein L1 [Oryza sativa (japonica
cultivar-group)] gi|34897236|ref|NP_909964.1| putative
60S ribosomal protein L1 [Oryza sativa (japonica
cultivar-group)] gi|50400025|gb|AAT76413.1| putative 60S
ribosomal protein L1 [Oryza sativa (japonica
cultivar-group)]
Length = 404
Score = 599 bits (1544), Expect = e-170
Identities = 288/404 (71%), Positives = 345/404 (85%), Gaps = 1/404 (0%)
Query: 5 AAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRK 64
AAAARPLV+++ LE +M+TDS + +P V+RA IRPD+V F H +S N RQPYAVSR+
Sbjct: 2 AAAARPLVSVKALEGDMATDSAG-IQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRR 60
Query: 65 AGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINV 124
AGHQTSAESWGTGRAVSRIPRV GGGTHRAGQ AFGNMCRGGRMFAPT+IWR+WHR++N+
Sbjct: 61 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNI 120
Query: 125 NQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAF 184
+R AV SA+AA+A+PSLVLARGHRIE VPEFPLVV D+ E +EKT ++IKVLKQ+GA+
Sbjct: 121 RLRRIAVASALAATAVPSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAY 180
Query: 185 ADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLN 244
ADAEK KDS+ IR GKGKMRNRRYI+RKGPLIVYGT+G+K VKAFRN+PGV++ NVERLN
Sbjct: 181 ADAEKTKDSVAIRAGKGKMRNRRYINRKGPLIVYGTEGSKVVKAFRNLPGVDVANVERLN 240
Query: 245 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSD 304
LL LAPGGHLGRFVIWT+ AF+KLD +YG FD + KKKG+VLPR KM N+DL+R+INSD
Sbjct: 241 LLDLAPGGHLGRFVIWTECAFKKLDEVYGGFDTPALKKKGFVLPRPKMANADLSRLINSD 300
Query: 305 EVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDK 364
EVQSVV+PI K+VK ++NPLKN+ +L+LNPY TA++MA LAEA RVK++ EK D
Sbjct: 301 EVQSVVKPINKEVKLREARRNPLKNVAAVLKLNPYFGTARKMAALAEAARVKARTEKLDS 360
Query: 365 KRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFSKWLGVSQ 408
KR +S EE+S IKAAGKAWY TM+SDSDY EF+NFSKWLGV+Q
Sbjct: 361 KRTKLSPEESSKIKAAGKAWYKTMISDSDYTEFENFSKWLGVTQ 404
>gb|AAM91438.1| AT5g02870/F9G14_180 [Arabidopsis thaliana]
gi|13605831|gb|AAK32901.1| AT5g02870/F9G14_180
[Arabidopsis thaliana]
Length = 307
Score = 518 bits (1333), Expect = e-145
Identities = 249/307 (81%), Positives = 283/307 (92%)
Query: 102 MCRGGRMFAPTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVV 161
MCRGGRMFAPT+IWR+WHR++NVN KR+A+VSAIAA+A+P+LV+ARGH+IE VPE PLVV
Sbjct: 1 MCRGGRMFAPTKIWRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVV 60
Query: 162 GDAAEGVEKTKEAIKVLKQVGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTD 221
D+AE VEKT AIKVLKQ+GA+ DAEKAK+S+GIRPGKGKMRNRRYISRKGPL+V+GT+
Sbjct: 61 SDSAEAVEKTSAAIKVLKQIGAYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTE 120
Query: 222 GAKAVKAFRNIPGVEITNVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEK 281
GAK VKAFRN+PGVE+ +VERLNLLKLAPGGHLGRFVIWTKSAFEKL+SIYG+F+K SEK
Sbjct: 121 GAKIVKAFRNLPGVELCHVERLNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEK 180
Query: 282 KKGYVLPRAKMVNSDLTRIINSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAK 341
KKGYVLPRAKMVN+DL RIINSDEVQSVV PIK KRA LKKNPLKNLNVM +LNPYAK
Sbjct: 181 KKGYVLPRAKMVNADLARIINSDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAK 240
Query: 342 TAKRMALLAEAERVKSKKEKFDKKRKIVSKEEASAIKAAGKAWYNTMVSDSDYAEFDNFS 401
TAKRM+LLAEA RVK+KKEK +KKRK+V+KEEA AIKAAGKAWY TM+SDSDY EFDNF+
Sbjct: 241 TAKRMSLLAEASRVKAKKEKLEKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFT 300
Query: 402 KWLGVSQ 408
KWLG SQ
Sbjct: 301 KWLGASQ 307
>dbj|BAA78600.1| 60S ribosomal protein L4 [Chlamydomonas sp. HS-5]
Length = 363
Score = 470 bits (1209), Expect = e-131
Identities = 236/363 (65%), Positives = 285/363 (78%), Gaps = 6/363 (1%)
Query: 51 ISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFA 110
++KN RQ YAV KAGHQT+AESWGTGRAVSRIPRV GGGTHRAGQAAFGNMCRGGRMFA
Sbjct: 1 MAKNKRQAYAVFMKAGHQTAAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFA 60
Query: 111 PTRIWRKWHRKINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEK 170
PT+ WR+WHRK+N+ QKR+AV SA+AASA+PSLV+ARGHRIE VPE PLV+ DA E V K
Sbjct: 61 PTKTWRRWHRKVNLTQKRHAVASALAASALPSLVMARGHRIEQVPEVPLVLSDAVESVSK 120
Query: 171 TKEAIKVLKQVGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFR 230
T +A+++LK++GA D EKAK S +R GKGKMRNRRY RKGPLIV+ D + +AFR
Sbjct: 121 TSKALEILKKIGAAPDVEKAKASKQLRRGKGKMRNRRYTLRKGPLIVFANDSGIS-RAFR 179
Query: 231 NIPGVEITNVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRA 290
N+ GVE+T+V+ LNLL+LAPGGH+GRF +WTKSAF+KLDSI+GT+ K SE KKGY LPRA
Sbjct: 180 NLTGVEVTSVDHLNLLQLAPGGHMGRFCVWTKSAFDKLDSIFGTYTKPSEVKKGYKLPRA 239
Query: 291 KMVNSDLTRIINSDEVQSVVRPIKK-DVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALL 349
M NSDLTR+INSDE+QSVVRP KK K A LKKNPLKNL ML+LNPYAK R +L
Sbjct: 240 CMTNSDLTRLINSDEIQSVVRPAKKLTTKHAPLKKNPLKNLGAMLKLNPYAKAQLRREVL 299
Query: 350 AEAERVKSKKEKFDKKR--KIVSKEEASAIKAAGKAWYNTMVSDSDY--AEFDNFSKWLG 405
+R +++EK R K V ++++ KA GK +Y M+ DSDY ++D FSKWLG
Sbjct: 300 VSEKRAVARQEKLAAMRAGKSVGPKKSAEQKALGKKFYKQMIVDSDYKGEDYDEFSKWLG 359
Query: 406 VSQ 408
S+
Sbjct: 360 ASE 362
>gb|AAH43895.1| Rpl-4-prov protein [Xenopus laevis] gi|71066|pir||R5XL1A ribosomal
protein XL1a - African clawed frog
gi|224828|prf||1202260A ribosomal protein L1a
Length = 396
Score = 455 bits (1170), Expect = e-126
Identities = 221/363 (60%), Positives = 280/363 (76%), Gaps = 4/363 (1%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MA + A ARPL+++ SE S + +P V RA IRPDIVNFVH+N+ KN+RQPYA
Sbjct: 1 MAVSMACARPLISVY---SEKGESSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYA 57
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR
Sbjct: 58 VSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHR 117
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
++N QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK+
Sbjct: 118 RVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKK 177
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+ A+ D +K S +R GKGKMRNRR I R+GP ++Y + VKAFRNIPG+ + NV
Sbjct: 178 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-LVKAFRNIPGITLLNV 236
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
+LNLL+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI
Sbjct: 237 SKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRI 296
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
+ S E+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++
Sbjct: 297 LKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEK 356
Query: 361 KFD 363
K D
Sbjct: 357 KPD 359
>emb|CAA28843.1| unnamed protein product [Xenopus laevis]
gi|132743|sp|P08429|RL4A_XENLA 60S ribosomal protein L4A
(L1A)
Length = 396
Score = 455 bits (1170), Expect = e-126
Identities = 221/363 (60%), Positives = 280/363 (76%), Gaps = 4/363 (1%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MA + A ARPL+++ SE S + +P V RA IRPDIVNFVH+N+ KN+RQPYA
Sbjct: 1 MAVSMACARPLISVY---SEKGESSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYA 57
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR
Sbjct: 58 VSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHR 117
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
++N QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK+
Sbjct: 118 RVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKK 177
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+ A+ D +K S +R GKGKMRNRR I R+GP ++Y + VKAFRNIPG+ + NV
Sbjct: 178 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-LVKAFRNIPGITLLNV 236
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
+LNLL+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI
Sbjct: 237 SKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRI 296
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
+ S E+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++
Sbjct: 297 LKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEK 356
Query: 361 KFD 363
K D
Sbjct: 357 KPD 359
>gb|AAH67580.1| Ribosomal protein L4 [Danio rerio] gi|29436531|gb|AAH49520.1|
Ribosomal protein L4 [Danio rerio]
gi|54261775|ref|NP_998272.1| ribosomal protein L4 [Danio
rerio]
Length = 375
Score = 453 bits (1166), Expect = e-126
Identities = 227/374 (60%), Positives = 280/374 (74%), Gaps = 5/374 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V RA IRPDIVNFVH+N+ KN RQPYAVS A
Sbjct: 2 ACARPLISVY---SEKGETSGKNVVMPAVFRAPIRPDIVNFVHTNMRKNKRQPYAVSELA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++NVN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVN 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+AASA+PSLV+A+GHRIE +PE PLVV D EG +KTKEA+ +LK++ A+
Sbjct: 119 QKRYAMCSALAASALPSLVMAKGHRIEEIPEVPLVVDDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I RKGP I+Y D +AFRNIPG+ + +V RL+L
Sbjct: 179 DIKKVYASQRMRAGKGKMRNRRRIQRKGPCIIYNEDNG-VTRAFRNIPGITLQSVSRLDL 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
LKLAPGGH+GRF IWT+ AF KLD +YGT+ K S K Y LP KM +DL RII S+E
Sbjct: 238 LKLAPGGHIGRFCIWTEGAFRKLDDLYGTWRKASTLKVDYNLPMHKMSITDLNRIIKSEE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKK 365
VQ +RP + + R KKNPLKNL VM++LNPYAKTA+R A++A VK+K K KK
Sbjct: 298 VQKAIRPANRKINRRVFKKNPLKNLRVMMKLNPYAKTARRRAIMAHNPDVKAKMLK-PKK 356
Query: 366 RKIVSKEEASAIKA 379
+++V K +A +A
Sbjct: 357 KRVVKKTKAKKAEA 370
>gb|AAH54956.1| MGC64318 protein [Xenopus laevis]
Length = 401
Score = 453 bits (1166), Expect = e-126
Identities = 224/394 (56%), Positives = 290/394 (72%), Gaps = 15/394 (3%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MA + A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYA
Sbjct: 1 MAVSMACARPLISVY---SEKGETSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYA 57
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR
Sbjct: 58 VSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHR 117
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
++N QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK+
Sbjct: 118 RVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKK 177
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+ A+ D +K S +R GKGKMRNRR I R+GP ++Y + +KAFRNIPG+ + NV
Sbjct: 178 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-IIKAFRNIPGITLLNV 236
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
+LNLL+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI
Sbjct: 237 SKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRI 296
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
+ S E+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++
Sbjct: 297 LKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEK 356
Query: 361 K-----------FDKKRKIVSKEEASAIKAAGKA 383
K D K K++ +A +A +A
Sbjct: 357 KPDDGKPKAKKPLDAKTKMIKLAKAKKRQARAEA 390
>gb|AAH41744.1| MGC64318 protein [Xenopus laevis]
Length = 375
Score = 453 bits (1165), Expect = e-126
Identities = 219/363 (60%), Positives = 280/363 (76%), Gaps = 4/363 (1%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MA + A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYA
Sbjct: 1 MAVSMACARPLISVY---SEKGETSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYA 57
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR
Sbjct: 58 VSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHR 117
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
++N QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK+
Sbjct: 118 RVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKK 177
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+ A+ D +K S +R GKGKMRNRR I R+GP ++Y + +KAFRNIPG+ + NV
Sbjct: 178 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-IIKAFRNIPGITLLNV 236
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
+LNLL+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI
Sbjct: 237 SKLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRI 296
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
+ S E+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++
Sbjct: 297 LKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEK 356
Query: 361 KFD 363
K D
Sbjct: 357 KPD 359
>emb|CAA29796.1| L1a protein [Xenopus laevis]
Length = 396
Score = 451 bits (1160), Expect = e-125
Identities = 220/363 (60%), Positives = 279/363 (76%), Gaps = 4/363 (1%)
Query: 1 MAAAAAAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYA 60
MA + A ARPL+++ SE S + +P V RA IRPDIVNFVH+N+ KN+RQPYA
Sbjct: 1 MAVSMACARPLISVY---SEKGESSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYA 57
Query: 61 VSRKAGHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHR 120
VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR
Sbjct: 58 VSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHR 117
Query: 121 KINVNQKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQ 180
++N QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK+
Sbjct: 118 RVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKK 177
Query: 181 VGAFADAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNV 240
+ A+ D +K S +R GKGKMRNRR I R+GP ++Y + VKAFRNIPG+ + NV
Sbjct: 178 LKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-LVKAFRNIPGITLLNV 236
Query: 241 ERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRI 300
+LNLL+LA GGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI
Sbjct: 237 SKLNLLRLALGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRI 296
Query: 301 INSDEVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKE 360
+ S E+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++
Sbjct: 297 LKSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEK 356
Query: 361 KFD 363
K D
Sbjct: 357 KPD 359
>gb|AAX62435.1| ribosomal protein L4 [Lysiphlebus testaceipes]
Length = 429
Score = 450 bits (1157), Expect = e-125
Identities = 225/375 (60%), Positives = 287/375 (76%), Gaps = 6/375 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
+ ARPLVT+ T ++E S + T+ +P V +A IRPDIVN +H ISKN RQPY VS KA
Sbjct: 4 STARPLVTVFTEKNEASKE---TISLPAVFKAPIRPDIVNTIHVQISKNKRQPYCVSEKA 60
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ A+GNMCRGGRMFAPT+ WR+WHRKINVN
Sbjct: 61 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAYGNMCRGGRMFAPTKPWRRWHRKINVN 120
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+VSAIAAS +P+LV+++GH I+ VPEFPLVV D + KTK+A+ L+++ A+
Sbjct: 121 QKRYALVSAIAASGVPALVMSKGHMIQDVPEFPLVVEDKIQEYTKTKQAVIFLRRIKAWT 180
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTD-GAKAVKAFRNIPGVEITNVERLN 244
D +K +S +R GKGKMRNRR++ R+GPLI+YG D G K KAFRNIPGV++ NV ++N
Sbjct: 181 DVKKVYNSKRLRAGKGKMRNRRHVQRRGPLIIYGQDKGLK--KAFRNIPGVDLMNVNKMN 238
Query: 245 LLKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSD 304
LLKLAPGGH+GRFVIWTKSAF+KLD++YGT+ K S KKGY LP KM N+DL RI+ S+
Sbjct: 239 LLKLAPGGHVGRFVIWTKSAFDKLDALYGTWRKESTLKKGYNLPYPKMANTDLARILKSE 298
Query: 305 EVQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDK 364
++ V+R +K V RA K NPL N ML+LNPYA KR A+L +R ++++ K
Sbjct: 299 AIRKVLRAPRKKVVRAVKKLNPLNNTRAMLKLNPYAAVTKRAAILNAQKRQQAREIAIAK 358
Query: 365 KRKIVSKEEASAIKA 379
KR I ++A A+K+
Sbjct: 359 KRGIELPKKAPAMKS 373
>emb|CAA28844.1| ribosomal protein L1b (396 AA) [Xenopus laevis]
gi|71067|pir||R5XL1B ribosomal protein XL1b - African
clawed frog (fragment) gi|132745|sp|P02385|RL4B_XENLA
60S ribosomal protein L4B (L1B) gi|224829|prf||1202260B
ribosomal protein L1b
Length = 396
Score = 450 bits (1157), Expect = e-125
Identities = 222/389 (57%), Positives = 287/389 (73%), Gaps = 15/389 (3%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS+ A
Sbjct: 1 ACARPLISVY---SEKGETSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 57
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 58 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 117
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYAV SA+AASA+P+L++++GHRIE +PE PLVV D E +KTKEA+ +LK++ A+
Sbjct: 118 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWN 177
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP ++Y + +KAFRNIPG+ + NV +LNL
Sbjct: 178 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNENNG-IIKAFRNIPGITLLNVSKLNL 236
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
L+LAPGGH+GRF IWT+SAF KLD +YGT+ K ++ K Y LP KM N+DLTRI+ S E
Sbjct: 237 LRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRILKSQE 296
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEK---- 361
+Q +R K VKR LKKNPLKNL +M+RLNPYAKTA+R A+L + E +K+K++K
Sbjct: 297 IQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKKPDDG 356
Query: 362 -------FDKKRKIVSKEEASAIKAAGKA 383
D K K++ +A +A +A
Sbjct: 357 KPKAKKPLDAKTKMIKLAKAKKRQARAEA 385
>gb|AAA74021.1| ribosomal protein gi|1350686|sp|P49165|RL4_URECA 60S ribosomal
protein L4 (L1) gi|7440596|pir||T12048 ribosomal protein
L4 - spoonworm (Urechis caupo)
Length = 386
Score = 449 bits (1154), Expect = e-125
Identities = 220/376 (58%), Positives = 284/376 (75%), Gaps = 9/376 (2%)
Query: 7 AARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKAG 66
AARPL+T+ S+ S + + +P V RA IRPDIVNFVH + KN RQPYAVS+KAG
Sbjct: 2 AARPLITVH---SDKGAASESNVTLPAVFRAPIRPDIVNFVHFELKKNGRQPYAVSQKAG 58
Query: 67 HQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVNQ 126
HQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRG RMFAPT+ WR+WHR++N Q
Sbjct: 59 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGRRMFAPTKTWRRWHRRVNTTQ 118
Query: 127 KRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFAD 186
+R+A+VSAIAA+ IP++V+++GH IE +PE PLVV D+ E ++KTKEA+ VL+++ A+ D
Sbjct: 119 RRHALVSAIAATGIPAVVMSKGHCIEQIPEVPLVVSDSVESIKKTKEAVVVLRRLKAWPD 178
Query: 187 AEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNLL 246
EK K+S R GKGK+RNRR I R+GPLI+YGTD + +AFRNIPG+ + NV RLNLL
Sbjct: 179 VEKVKNSRRFRAGKGKLRNRRAIQRRGPLIIYGTDNGIS-RAFRNIPGITLVNVNRLNLL 237
Query: 247 KLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDEV 306
+APGGH+GRF IWT+SAF++LD+IYGT+ + S +K Y LP KM N+DL+R++ SDE+
Sbjct: 238 SMAPGGHVGRFCIWTESAFKQLDNIYGTWKRPSAEKSHYNLPMPKMTNTDLSRLLKSDEI 297
Query: 307 QSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKKR 366
Q+ +R KKD R KKNPLKN VM+RLNP+A K A E R+K K+ K D+KR
Sbjct: 298 QNALREPKKDKARRLQKKNPLKNYRVMMRLNPFAGAQKAAAKAVEQRRLKEKQAKLDQKR 357
Query: 367 KIVSKEEASAIKAAGK 382
I A+ ++ AGK
Sbjct: 358 GI-----ATPVEGAGK 368
>gb|AAP20200.1| ribosomal protein L4 [Pagrus major]
Length = 367
Score = 447 bits (1149), Expect = e-124
Identities = 219/360 (60%), Positives = 274/360 (75%), Gaps = 4/360 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE + + +P V +A IRPD+VNFVH+N+ KNSRQPYAVS A
Sbjct: 2 ACARPLISVY---SEKGETAGKNVVMPAVFKAPIRPDVVNFVHTNMRKNSRQPYAVSELA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR+IN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRINTT 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+AASAIP+LV+++GHRIE +PE PLVV D EG +KTKEA+ +LK++ A+
Sbjct: 119 QKRYAICSAVAASAIPALVMSKGHRIEEIPEVPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP I+Y D A KAFRNIPG+ + NV +LNL
Sbjct: 179 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNQD-AGVTKAFRNIPGITLQNVNKLNL 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
L+LAPGGH+GRF IWT+SAF KLD +YGT+ K + KKGY LP KM N+DL+RI+ S+E
Sbjct: 238 LRLAPGGHVGRFCIWTESAFRKLDELYGTWRKPASLKKGYNLPMHKMTNTDLSRILKSEE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKK 365
+Q + K + R LKKNPLKNL +ML+LNPYAKTA+R A+L +K+K K +K
Sbjct: 298 IQKALHAPNKKINRRVLKKNPLKNLRIMLKLNPYAKTARRHAILKHDPAIKAKMLKPKRK 357
>gb|AAH03459.1| Ribosomal protein L4 [Mus musculus] gi|22001911|sp|Q9D8E6|RL4_MOUSE
60S ribosomal protein L4 (L1)
gi|30794450|ref|NP_077174.1| ribosomal protein L4 [Mus
musculus] gi|26353248|dbj|BAC40254.1| unnamed protein
product [Mus musculus] gi|62825991|gb|AAH94036.1|
Ribosomal protein L4 [Mus musculus]
gi|12842070|dbj|BAB25458.1| unnamed protein product [Mus
musculus]
Length = 419
Score = 446 bits (1147), Expect = e-124
Identities = 216/378 (57%), Positives = 279/378 (73%), Gaps = 4/378 (1%)
Query: 6 AAARPLVTIQTLESEMSTDSPNTLPIPDVMRASIRPDIVNFVHSNISKNSRQPYAVSRKA 65
A ARPL+++ SE S + +P V +A IRPDIVNFVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVY---SEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 66 GHQTSAESWGTGRAVSRIPRVAGGGTHRAGQAAFGNMCRGGRMFAPTRIWRKWHRKINVN 125
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPT+ WR+WHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 126 QKRYAVVSAIAASAIPSLVLARGHRIETVPEFPLVVGDAAEGVEKTKEAIKVLKQVGAFA 185
QKRYA+ SA+AASA+P+LV+++GHRIE VPE PLVV D EG +KTKEA+++LK++ A+
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWN 178
Query: 186 DAEKAKDSLGIRPGKGKMRNRRYISRKGPLIVYGTDGAKAVKAFRNIPGVEITNVERLNL 245
D +K S +R GKGKMRNRR I R+GP I+Y D +KAFRNIPG+ + NV +LN+
Sbjct: 179 DIKKVYASQRMRAGKGKMRNRRRIQRRGPCIIYNEDNG-IIKAFRNIPGITLLNVSKLNI 237
Query: 246 LKLAPGGHLGRFVIWTKSAFEKLDSIYGTFDKGSEKKKGYVLPRAKMVNSDLTRIINSDE 305
LKLAPGGH+GRF IWT+SAF KLD +YGT+ K + K Y LP KM+N+DL+RI+ S E
Sbjct: 238 LKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKMMNTDLSRILKSPE 297
Query: 306 VQSVVRPIKKDVKRATLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKSKKEKFDKK 365
+Q +R +K + R LKKNPLKNL +ML+LNPYAKT +R +L +A K + +K +
Sbjct: 298 IQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQARNHKLRVKKLEAA 357
Query: 366 RKIVSKEEASAIKAAGKA 383
++ + + G A
Sbjct: 358 ATALATKSEKVVPEKGTA 375
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.131 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 658,380,650
Number of Sequences: 2540612
Number of extensions: 27069947
Number of successful extensions: 85164
Number of sequences better than 10.0: 208
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 84715
Number of HSP's gapped (non-prelim): 260
length of query: 408
length of database: 863,360,394
effective HSP length: 130
effective length of query: 278
effective length of database: 533,080,834
effective search space: 148196471852
effective search space used: 148196471852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)
Medicago: description of AC123596.12