BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122729.4 - phase: 0
(113 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||HSPM3 histone H3 - garden pea (tentative sequence) gi|82610... 185 2e-46
emb|CAA31966.1| histone H3 (AA 1-123) [Medicago sativa] gi|29167... 185 2e-46
emb|CAA31965.1| unnamed protein product [Medicago sativa] gi|196... 185 2e-46
gb|AAX92719.1| histone H3 - maize [Oryza sativa (japonica cultiv... 184 4e-46
gb|AAA32655.1| histone H3 (H3-1.1) 184 6e-46
ref|NP_910498.1| histone H3 [Oryza sativa (japonica cultivar-gro... 183 1e-45
sp|P08903|H3_ENCAL Histone H3 gi|70751|pir||HSEAH3 histone H3 - ... 183 1e-45
pir||JQ1984 H3.3 like histone MH321 - mouse 182 2e-45
pir||S56707 histone H3 homolog - common tobacco 182 2e-45
sp|P08860|H32_ORYSA Histone H3 gi|940018|gb|AAA74190.1| histone ... 182 2e-45
gb|AAV65112.1| histone 3 [Camellia sinensis] 182 2e-45
pir||JQ1983 H3.3 like histone MH921 - mouse 182 2e-45
ref|NP_473386.1| histone 2, H3c2 [Mus musculus] gi|7305139|ref|N... 180 8e-45
ref|XP_307081.1| ENSANGP00000001387 [Anopheles gambiae str. PEST... 180 8e-45
gb|AAH74969.1| H3/o protein [Homo sapiens] 180 8e-45
ref|XP_227461.2| PREDICTED: similar to histone protein Hist2h3c1... 180 8e-45
ref|XP_540290.1| PREDICTED: similar to histone protein Hist2h3c1... 180 8e-45
ref|XP_540283.1| PREDICTED: similar to CG31613-PA [Canis familia... 180 8e-45
emb|CAB02546.1| histone H3 [Homo sapiens] gi|18202621|sp|Q93081|... 180 8e-45
ref|XP_524859.1| PREDICTED: hypothetical protein XP_524859 [Pan ... 180 8e-45
>pir||HSPM3 histone H3 - garden pea (tentative sequence) gi|82610|pir||S00373
histone H3 - wheat
Length = 135
Score = 185 bits (470), Expect = 2e-46
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>emb|CAA31966.1| histone H3 (AA 1-123) [Medicago sativa] gi|2916748|emb|CAA05554.1|
histone H3 [Pisum sativum]
Length = 123
Score = 185 bits (470), Expect = 2e-46
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 12 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 71
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 72 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 123
>emb|CAA31965.1| unnamed protein product [Medicago sativa] gi|19607|emb|CAA31964.1|
unnamed protein product [Medicago sativa]
gi|21797|emb|CAA25451.1| unnamed protein product
[Triticum aestivum] gi|55977044|sp|P68429|H31_MEDSA
Histone H3.1 (Major histone H3)
gi|2565419|gb|AAB81995.1| histone H3 [Onobrychis
viciifolia] gi|488565|gb|AAB49545.1| histone H3.1
gi|82609|pir||A26014 histone H3 - wheat
gi|55977045|sp|P68430|H3_ONOVI Histone H3
gi|55977043|sp|P68428|H3_WHEAT Histone H3
gi|55977041|sp|P68427|H3_PEA Histone H3
Length = 136
Score = 185 bits (470), Expect = 2e-46
Identities = 97/112 (86%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAVSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 85 FQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>gb|AAX92719.1| histone H3 - maize [Oryza sativa (japonica cultivar-group)]
gi|34898300|ref|NP_910496.1| histone H3 [Oryza sativa
(japonica cultivar-group)] gi|34898312|ref|NP_910502.1|
histone H3 [Oryza sativa (japonica cultivar-group)]
gi|34898310|ref|NP_910501.1| histone H3 [Oryza sativa
(japonica cultivar-group)] gi|1531754|emb|CAA57811.1|
Histone H3 [Asparagus officinalis]
gi|20253|emb|CAA31970.1| unnamed protein product [Oryza
sativa] gi|20251|emb|CAA31969.1| unnamed protein product
[Oryza sativa] gi|50931575|ref|XP_475315.1| putative
histone H3 [Oryza sativa (japonica cultivar-group)]
gi|50924191|ref|XP_472456.1| OSJNBb0108J11.17 [Oryza
sativa (japonica cultivar-group)]
gi|34908584|ref|NP_915639.1| putative histone H3 [Oryza
sativa (japonica cultivar-group)]
gi|32488365|emb|CAE02924.1| OSJNBb0108J11.17 [Oryza
sativa (japonica cultivar-group)]
gi|7671464|emb|CAB89404.1| histone H3-like protein
[Arabidopsis thaliana] gi|7671463|emb|CAB89403.1|
histone H3-like protein [Arabidopsis thaliana]
gi|29824185|gb|AAP04053.1| putative histone H3
[Arabidopsis thaliana] gi|22324934|gb|AAM95675.1|
histone H3 [Orobanche cumana] gi|21536571|gb|AAM60903.1|
histone H3-like protein [Arabidopsis thaliana]
gi|7939509|dbj|BAA95712.1| histone H3-like protein
[Arabidopsis thaliana] gi|9759616|dbj|BAB11558.1|
histone H3 [Arabidopsis thaliana]
gi|26449416|dbj|BAC41835.1| putative histone H3
[Arabidopsis thaliana] gi|28973783|gb|AAO64207.1|
putative histone H3 [Arabidopsis thaliana]
gi|27808628|gb|AAO24594.1| At1g09200 [Arabidopsis
thaliana] gi|27764990|gb|AAO23616.1| At5g10400
[Arabidopsis thaliana] gi|19548061|gb|AAL87394.1|
AT5g65360/MNA5_9 [Arabidopsis thaliana]
gi|18655353|gb|AAL76132.1| AT3g27360/K1G2_6 [Arabidopsis
thaliana] gi|7595794|gb|AAF64452.1| histone H3
[Euphorbia esula] gi|18390992|ref|NP_563838.1| histone
H3 [Arabidopsis thaliana] gi|15238433|ref|NP_201339.1|
histone H3 [Arabidopsis thaliana]
gi|18416264|ref|NP_568228.1| histone H3 [Arabidopsis
thaliana] gi|18416261|ref|NP_568227.1| histone H3
[Arabidopsis thaliana] gi|21644654|dbj|BAC01212.1|
histone H3 [Oryza sativa (japonica cultivar-group)]
gi|27529854|dbj|BAC53942.1| H3 histone [Nicotiana
tabacum] gi|14532560|gb|AAK64008.1| AT5g65360/MNA5_9
[Arabidopsis thaliana] gi|14335142|gb|AAK59851.1|
AT3g27360/K1G2_6 [Arabidopsis thaliana]
gi|46981297|gb|AAT07615.1| putative histone H3 [Oryza
sativa (japonica cultivar-group)]
gi|13926211|gb|AAK49583.1| histone H3 [Arabidopsis
thaliana] gi|59799581|sp|P69247|H31_ORYSA Histone H3
gi|59799553|sp|P69248|H3_PETCR Histone H3
gi|59799552|sp|P69246|H3_MAIZE Histone H3
gi|62286642|sp|Q71T45|H3_EUPES Histone H3
gi|27805477|sp|P59226|H3_ARATH Histone H3
gi|3249101|gb|AAC24084.1| Match to histone H3 gene
gb|M17131 and gb|M35387 from A. thaliana. ESTs
gb|H76511 gb|H76255, gb|AA712452, gb|N65260 and
gb|T42306 come from this gene. [Arabidopsis thaliana]
gi|15232146|ref|NP_189372.1| histone H3 [Arabidopsis
thaliana] gi|52076001|dbj|BAD46454.1| histone H3 [Oryza
sativa (japonica cultivar-group)]
gi|52076000|dbj|BAD46453.1| histone H3 [Oryza sativa
(japonica cultivar-group)] gi|52075995|dbj|BAD46448.1|
histone H3 [Oryza sativa (japonica cultivar-group)]
gi|5295940|dbj|BAA81841.1| histone H3 [Oryza sativa
(japonica cultivar-group)] gi|5295939|dbj|BAA81840.1|
histone H3 [Oryza sativa (japonica cultivar-group)]
gi|1314779|gb|AAB67837.1| histone H3 homolog [Brassica
napus] gi|886738|emb|CAA59111.1| histone 3 [Zea mays]
gi|1667592|gb|AAB18816.1| histone 3 [Oryza sativa]
gi|1040764|gb|AAA79889.1| histone H3
gi|168506|gb|AAA66265.1| histone H3
gi|169659|gb|AAA33854.1| histone H3
gi|169657|gb|AAA33853.1| histone H3
gi|169655|gb|AAA33852.1| histone H3
gi|168497|gb|AAA33473.1| histone H3
gi|168495|gb|AAA33472.1| histone H3
gi|168493|gb|AAA33471.1| histone H3 (H3C3)
gi|387567|gb|AAA32809.1| histone H3
gi|387565|gb|AAA32808.1| histone H3
gi|225839|prf||1314298B histone H3
gi|225459|prf||1303352A histone H3
Length = 136
Score = 184 bits (467), Expect = 4e-46
Identities = 96/112 (85%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>gb|AAA32655.1| histone H3 (H3-1.1)
Length = 136
Score = 184 bits (466), Expect = 6e-46
Identities = 96/112 (85%), Positives = 101/112 (89%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ S VSALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 85 FQSSVVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>ref|NP_910498.1| histone H3 [Oryza sativa (japonica cultivar-group)]
Length = 143
Score = 183 bits (464), Expect = 1e-45
Identities = 96/112 (85%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
AT KSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 32 ATCKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 91
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 92 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 143
>sp|P08903|H3_ENCAL Histone H3 gi|70751|pir||HSEAH3 histone H3 - Altenstein's bread
tree gi|224865|prf||1202289A histone H3
Length = 135
Score = 183 bits (464), Expect = 1e-45
Identities = 95/112 (84%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRFRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>pir||JQ1984 H3.3 like histone MH321 - mouse
Length = 135
Score = 182 bits (462), Expect = 2e-45
Identities = 91/112 (81%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA +TGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ +A+ ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LACRIR ERA
Sbjct: 84 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLACRIRRERA 135
>pir||S56707 histone H3 homolog - common tobacco
Length = 136
Score = 182 bits (462), Expect = 2e-45
Identities = 95/112 (84%), Positives = 101/112 (89%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AEA +VGLFED NLCAIHAKRVTI+PKDI+L RIR ERA
Sbjct: 85 FQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLPRRIRGERA 136
>sp|P08860|H32_ORYSA Histone H3 gi|940018|gb|AAA74190.1| histone H3
gi|169793|gb|AAA33907.1| histone 3
Length = 136
Score = 182 bits (461), Expect = 2e-45
Identities = 95/112 (84%), Positives = 100/112 (88%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE AE +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 85 FQTSAVRALQEAAERYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>gb|AAV65112.1| histone 3 [Camellia sinensis]
Length = 136
Score = 182 bits (461), Expect = 2e-45
Identities = 94/112 (83%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHRFRPGTVALREIRKYQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV+ALQE AE+ +VGLFED NLCAIHAKRVTI+PKD++LA RIR ERA
Sbjct: 85 FQSSAVAALQEAAESYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 136
>pir||JQ1983 H3.3 like histone MH921 - mouse
Length = 135
Score = 182 bits (461), Expect = 2e-45
Identities = 90/112 (80%), Positives = 102/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA +TGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ +A+ ALQE +EA +VGLFED NLCA+HAKRVTI+PKDI+LACRIR ERA
Sbjct: 84 FQSAAIGALQEASEAYLVGLFEDTNLCAVHAKRVTIMPKDIQLACRIRGERA 135
>ref|NP_473386.1| histone 2, H3c2 [Mus musculus] gi|7305139|ref|NP_038576.1| histone
1, H3f [Mus musculus] gi|30061337|ref|NP_835511.1|
histone1, H3d [Mus musculus]
gi|30089712|ref|NP_783584.1| histone1, H3c [Mus
musculus] gi|30061341|ref|NP_835512.1| histone 1, H3e
[Mus musculus] gi|30061339|ref|NP_835510.1| histone 1,
H3b [Mus musculus] gi|30061347|ref|NP_835587.1| histone
2, H3b [Mus musculus] gi|30061397|ref|NP_835586.1|
histone 2, H2be [Mus musculus] gi|10863|emb|CAA41696.1|
H3 histone [Urechis caupo] gi|62663579|ref|XP_344596.2|
PREDICTED: similar to CG31613-PA [Rattus norvegicus]
gi|62644032|ref|XP_227460.3| PREDICTED: similar to
CG31613-PA [Rattus norvegicus]
gi|24585677|ref|NP_724345.1| CG31613-PA [Drosophila
melanogaster] gi|55960989|emb|CAI12566.1| novel protein
similar to histone 2, H3c (HIST2H3C) [Homo sapiens]
gi|55960986|emb|CAI12561.1| histone 2, H3c [Homo
sapiens] gi|55960984|emb|CAI12559.1| novel protein
similar to histone 2, H3c (HIST2H3C) [Homo sapiens]
gi|515836|emb|CAA56577.1| histone H3 protein [Mus
musculus] gi|516331|emb|CAA56573.1| histone H3.2 protein
[Mus pahari] gi|297563|emb|CAA51324.1| histone H3
[Chironomus thummi] gi|7083|emb|CAA39771.1| histone H3
[Chironomus thummi] gi|9821|emb|CAA37417.1| unnamed
protein product [Platynereis dumerilii]
gi|7433|emb|CAA36805.1| histone H3 [Drosophila hydei]
gi|10615|emb|CAA36638.1| histone H3 [Tigriopus
californicus] gi|7439|emb|CAA34919.1| unnamed protein
product [Drosophila hydei] gi|62735|emb|CAA32856.1|
unnamed protein product [Cairina moschata]
gi|62734|emb|CAA32855.1| unnamed protein product
[Cairina moschata] gi|64778|emb|CAA26818.1| unnamed
protein product [Xenopus laevis]
gi|64772|emb|CAA26813.1| unnamed protein product
[Xenopus laevis] gi|64326|emb|CAA25529.1| unnamed
protein product [Oncorhynchus mykiss]
gi|63474|emb|CAA26138.1| unnamed protein product [Gallus
gallus] gi|56205286|emb|CAI24897.1| OTTMUSP00000000529
[Mus musculus] gi|56205281|emb|CAI24892.1| RP23-283N14.9
[Mus musculus] gi|56205278|emb|CAI24889.1| RP23-283N14.7
[Mus musculus] gi|56237862|emb|CAI25844.1|
RP23-480B19.13 [Mus musculus]
gi|56237859|emb|CAI25840.1| H3f2 [Mus musculus]
gi|49659925|gb|AAT68254.1| histone H3/o [Homo sapiens]
gi|23304766|emb|CAD37824.1| histone H3 [Mytilus edulis]
gi|23304763|emb|CAD37822.1| histone H3 [Mytilus edulis]
gi|23304758|emb|CAD37818.1| histone H3 [Mytilus edulis]
gi|61820745|ref|XP_580747.1| PREDICTED: similar to
CG31613-PA [Bos taurus] gi|63482|emb|CAA44180.1| histone
H3-IV [Gallus gallus] gi|63484|emb|CAA44181.1| histone
H3-V [Gallus gallus] gi|64781|emb|CAA26890.1| unnamed
protein product [Xenopus laevis]
gi|38564139|dbj|BAD02419.1| histone 3 [Drosophila
americana] gi|38564137|dbj|BAD02418.1| histone 3
[Drosophila lutescens] gi|38564135|dbj|BAD02417.1|
histone 3 [Drosophila immigrans]
gi|38564133|dbj|BAD02416.1| histone 3 [Drosophila
ficusphila] gi|38564131|dbj|BAD02415.1| histone 3
[Drosophila takahashii] gi|23664258|gb|AAN39283.1|
histone H3 [Homo sapiens] gi|27372734|gb|AAO06265.1|
histone protein Hist2h3b [Mus musculus]
gi|27372726|gb|AAO06261.1| histone protein Hist1h3b [Mus
musculus] gi|27372724|gb|AAO06260.1| histone protein
Hist1h3c [Mus musculus] gi|27372722|gb|AAO06259.1|
histone protein Hist1h3d [Mus musculus]
gi|27372720|gb|AAO06258.1| histone protein Hist1h3e [Mus
musculus] gi|27372718|gb|AAO06257.1| histone protein
Hist1h3f [Mus musculus] gi|27372706|gb|AAO06251.1|
histone protein Hist2h2bb [Mus musculus]
gi|22947019|gb|AAN11127.1| CG31613-PA [Drosophila
melanogaster] gi|50729220|ref|XP_425461.1| PREDICTED:
similar to CG31613-PA [Gallus gallus]
gi|57964328|ref|XP_560604.1| ENSANGP00000025641
[Anopheles gambiae str. PEST]
gi|31230265|ref|XP_318362.1| ENSANGP00000016005
[Anopheles gambiae str. PEST]
gi|31212291|ref|XP_315130.1| ENSANGP00000015258
[Anopheles gambiae str. PEST]
gi|31197317|ref|XP_307606.1| ENSANGP00000016172
[Anopheles gambiae str. PEST]
gi|31197307|ref|XP_307601.1| ENSANGP00000016200
[Anopheles gambiae str. PEST]
gi|31194097|ref|XP_305996.1| ENSANGP00000012784
[Anopheles gambiae str. PEST] gi|21307835|gb|AAL54861.1|
histone H3 [Aplysia californica]
gi|15929686|gb|AAH15270.1| Histone 2, H3c2 [Mus
musculus] gi|67677880|gb|AAH97060.1| Unknown (protein
for MGC:113984) [Danio rerio] gi|15930226|gb|AAH15544.1|
histone gene complex 1 [Homo sapiens]
gi|31742503|ref|NP_066403.2| H3 histone family, member M
[Homo sapiens] gi|1458146|gb|AAB04772.1| histone
H3.2-616 [Mus musculus] gi|1458144|gb|AAB04771.1|
histone H3.2-615 [Mus musculus]
gi|1458134|gb|AAB04764.1| histone H3.2-B [Mus musculus]
gi|1458128|gb|AAB04760.1| histone H3.2-F [Mus musculus]
gi|14269420|gb|AAK58062.1| histone H3 [Rhynchosciara
americana] gi|55977060|sp|P84229|H31_CHICK Histone H3
(Histone H3 class I) gi|55977059|sp|P84228|H32_MOUSE
Histone H3.2 gi|21290860|gb|EAA03005.1|
ENSANGP00000012784 [Anopheles gambiae str. PEST]
gi|21291252|gb|EAA03397.1| ENSANGP00000016200 [Anopheles
gambiae str. PEST] gi|55246559|gb|EAL42097.1|
ENSANGP00000025641 [Anopheles gambiae str. PEST]
gi|21291261|gb|EAA03406.1| ENSANGP00000016172 [Anopheles
gambiae str. PEST] gi|7767078|pdb|1EQZ|G Chain G, X-Ray
Structure Of The Nucleosome Core Particle At 2.5 A
Resolution gi|7767074|pdb|1EQZ|C Chain C, X-Ray
Structure Of The Nucleosome Core Particle At 2.5 A
Resolution gi|21298353|gb|EAA10498.1| ENSANGP00000015258
[Anopheles gambiae str. PEST] gi|21301528|gb|EAA13673.1|
ENSANGP00000016005 [Anopheles gambiae str. PEST]
gi|46397771|sp|P02299|H3_DROME Histone H3
gi|47225208|emb|CAF98835.1| unnamed protein product
[Tetraodon nigroviridis] gi|47225171|emb|CAF98798.1|
unnamed protein product [Tetraodon nigroviridis]
gi|47225164|emb|CAF98791.1| unnamed protein product
[Tetraodon nigroviridis] gi|47221341|emb|CAF97259.1|
unnamed protein product [Tetraodon nigroviridis]
gi|1493819|gb|AAC60005.1| histone H3-VIII
gi|1493817|gb|AAC60004.1| histone H3-VII
gi|1493815|gb|AAC60003.1| histone H3-VI
gi|47212273|emb|CAF89505.1| unnamed protein product
[Tetraodon nigroviridis] gi|161895|gb|AAC41552.1|
histone H3 gi|2564107|gb|AAC15916.1| histone H3
[Chaetopterus variopedatus] gi|33114100|gb|AAP94668.1|
histone H3 [Mytilus edulis] gi|33114098|gb|AAP94667.1|
histone H3 [Mytilus galloprovincialis]
gi|33114096|gb|AAP94666.1| histone H3 [Mytilus
trossulus] gi|33114057|gb|AAP94646.1| histone H3
[Mytilus galloprovincialis] gi|51319|emb|CAA25840.1|
unnamed protein product [Mus musculus]
gi|51247795|pdb|1TZY|G Chain G, Crystal Structure Of The
Core-Histone Octamer To 1.90 Angstrom Resolution
gi|51247791|pdb|1TZY|C Chain C, Crystal Structure Of The
Core-Histone Octamer To 1.90 Angstrom Resolution
gi|13096391|pdb|1HQ3|G Chain G, Crystal Structure Of The
Histone-Core-Octamer In KclPHOSPHATE
gi|13096387|pdb|1HQ3|C Chain C, Crystal Structure Of The
Histone-Core-Octamer In KclPHOSPHATE
gi|2119021|pir||I49397 histone H3.2 protein - shrew
mouse gi|2119019|pir||I50460 H3 histone - muscovy duck
gi|1085856|pir||A56654 histone H3 - Tigriopus
californicus gi|1078925|pir||A56618 histone H3 -
spoonworm (Urechis caupo) gi|102611|pir||S11315 histone
H3 - polychaete (Platynereis dumerilii)
gi|103050|pir||S09655 histone H3 - fruit fly (Drosophila
hydei) gi|2119005|pir||A56580 histone H3 - midge
(Chironomus thummi thummi) gi|2119020|pir||I51448
histone H3 - African clawed frog
gi|7415984|dbj|BAA93628.1| histone H3 [Drosophila orena]
gi|7415980|dbj|BAA93626.1| histone H3 [Drosophila
yakuba] gi|7415978|dbj|BAA93625.1| histone H3
[Drosophila teissieri] gi|7415976|dbj|BAA93624.1|
histone H3 [Drosophila mauritiana]
gi|7415974|dbj|BAA93623.1| histone H3 [Drosophila
sechellia] gi|7415972|dbj|BAA93622.1| histone H3
[Drosophila simulans] gi|7415970|dbj|BAA93621.1| histone
H3 [Drosophila melanogaster]
gi|62860150|ref|NP_001016636.1| hypothetical protein
LOC549390 [Xenopus tropicalis] gi|455387|gb|AAA49770.1|
histone H3 gi|214279|gb|AAA49765.1| histone H3
gi|211857|gb|AAA48796.1| histone H3
gi|12861001|dbj|BAB32097.1| unnamed protein product [Mus
musculus] gi|6980691|pdb|2HIO|C Chain C, Histone Octamer
(Chicken), Chromosomal Protein
gi|55977061|sp|P84233|H31_XENLA Histone H3.1
gi|55977054|sp|P84239|H3_URECA Histone H3
gi|55977053|sp|P84238|H3_CHITH Histone H3 (H3)
gi|55977052|sp|P84237|H3_TIGCA Histone H3
gi|55977051|sp|P84236|H3_DROHY Histone H3
gi|55977050|sp|P84235|H3_PLADU Histone H3
gi|55977049|sp|P84234|H3_ONCMY Histone H3
gi|55977046|sp|P84230|H3_CAIMO Histone H3
gi|387197|gb|AAA37812.1| histone H3
gi|387195|gb|AAA37810.1| histone H3
gi|387183|gb|AAA37764.1| histone H3.2
gi|53793688|ref|NP_001005464.1| histone H3/o [Homo
sapiens] gi|12845343|dbj|BAB26714.1| unnamed protein
product [Mus musculus]
Length = 136
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 85 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>ref|XP_307081.1| ENSANGP00000001387 [Anopheles gambiae str. PEST]
gi|21290751|gb|EAA02896.1| ENSANGP00000001387 [Anopheles
gambiae str. PEST] gi|70746|pir||HSXL31 histone H3.1 -
African clawed frog gi|70744|pir||HSTR3 histone H3,
gonadal - rainbow trout gi|70743|pir||HSRK3 histone H3 -
striped catshark gi|70745|pir||HSFI3 histone H3 -
smallmouth buffalo fish gi|55977058|sp|P84227|H32_BOVIN
Histone H3.2 gi|55977048|sp|P84232|H3_PORAF Histone H3
gi|55977047|sp|P84231|H3_ICTBU Histone H3
gi|223453|prf||0806228A histone H3
gi|350633|prf||0710252A histone H3
Length = 135
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 24 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 83
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 84 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>gb|AAH74969.1| H3/o protein [Homo sapiens]
Length = 145
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 34 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 93
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 94 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 145
>ref|XP_227461.2| PREDICTED: similar to histone protein Hist2h3c1 [Rattus norvegicus]
Length = 190
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 79 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 138
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 139 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 190
>ref|XP_540290.1| PREDICTED: similar to histone protein Hist2h3c1 [Canis familiaris]
gi|57098919|ref|XP_540285.1| PREDICTED: similar to
histone protein Hist2h3c1 [Canis familiaris]
Length = 174
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 63 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 122
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 123 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 174
>ref|XP_540283.1| PREDICTED: similar to CG31613-PA [Canis familiaris]
Length = 205
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 94 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 153
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 154 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 205
>emb|CAB02546.1| histone H3 [Homo sapiens] gi|18202621|sp|Q93081|H3B_HUMAN Histone
H3/b
Length = 136
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 100/112 (89%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 25 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 84
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 85 FQSSAVMALQEACEATLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>ref|XP_524859.1| PREDICTED: hypothetical protein XP_524859 [Pan troglodytes]
Length = 191
Score = 180 bits (456), Expect = 8e-45
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 2 ATRKSALATGGMKKPHRFRPGTVALREIRKYQKITELLIRKLPFKRLVHEIAQDFKTDLR 61
A RKSA ATGG+KKPHR+RPGTVALREIR+YQK TELLIRKLPF+RLV EIAQDFKTDLR
Sbjct: 80 AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLR 139
Query: 62 FQISAVSALQEIAEACIVGLFEDMNLCAIHAKRVTIVPKDIKLACRIRCERA 113
FQ SAV ALQE +EA +VGLFED NLCAIHAKRVTI+PKDI+LA RIR ERA
Sbjct: 140 FQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 191
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.328 0.140 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,583,040
Number of Sequences: 2540612
Number of extensions: 5155495
Number of successful extensions: 13942
Number of sequences better than 10.0: 916
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 12934
Number of HSP's gapped (non-prelim): 926
length of query: 113
length of database: 863,360,394
effective HSP length: 89
effective length of query: 24
effective length of database: 637,245,926
effective search space: 15293902224
effective search space used: 15293902224
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC122729.4