BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122162.7 - phase: 0
(377 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565401.1| F-box family protein [Arabidopsis thaliana] 176 1e-42
gb|AAT69212.1| hypothetical protein At2g17036 [Arabidopsis thali... 143 7e-33
ref|NP_565403.1| F-box family protein [Arabidopsis thaliana] 142 2e-32
gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana] 141 3e-32
gb|AAF18598.1| hypothetical protein [Arabidopsis thaliana] gi|25... 120 7e-26
dbj|BAB08727.1| unnamed protein product [Arabidopsis thaliana] g... 112 2e-23
dbj|BAA96935.1| unnamed protein product [Arabidopsis thaliana] g... 90 1e-16
gb|AAD38258.1| Hypothetical Protein [Arabidopsis thaliana] gi|25... 75 3e-12
ref|NP_176664.2| F-box family protein [Arabidopsis thaliana] 75 3e-12
gb|AAO23598.1| At2g24250/F27D4.16 [Arabidopsis thaliana] gi|2019... 70 1e-10
pir||D84634 hypothetical protein At2g24250 [imported] - Arabidop... 70 1e-10
gb|AAD22308.1| hypothetical protein [Arabidopsis thaliana] gi|15... 65 3e-09
pir||C84555 hypothetical protein At2g17690 [imported] - Arabidop... 59 3e-07
ref|NP_176753.1| F-box family protein [Arabidopsis thaliana] gi|... 56 2e-06
ref|NP_176752.1| F-box family protein [Arabidopsis thaliana] 56 2e-06
gb|AAM15098.1| hypothetical protein [Arabidopsis thaliana] gi|18... 53 2e-05
gb|AAT68353.1| hypothetical protein At2g24255 [Arabidopsis thali... 50 1e-04
gb|AAD22307.1| hypothetical protein [Arabidopsis thaliana] gi|25... 49 3e-04
ref|NP_179225.2| F-box family protein [Arabidopsis thaliana] 49 3e-04
gb|AAP54659.1| hypothetical protein [Oryza sativa (japonica cult... 47 0.001
>ref|NP_565401.1| F-box family protein [Arabidopsis thaliana]
Length = 407
Score = 176 bits (446), Expect = 1e-42
Identities = 139/409 (33%), Positives = 202/409 (48%), Gaps = 56/409 (13%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DWS LP +LL LIS+ L++ L++FRSVCS+WRS++ P SPL P
Sbjct: 1 MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP------KSPLPTHHLP--- 51
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNP----WLIRIGPDFK--GKTQLW 114
P N ++ + RL +I LIKP H+P + WLI++ D K L
Sbjct: 52 ILPDNGGSLFPDSAVGFRLSQRSILLIKP--HEPCIESDSFGWLIKVEEDLNVPRKVTLL 109
Query: 115 HPFSSGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAV----CR 169
P +N + +F VLD +K R LG + + +G S A V C
Sbjct: 110 DPLCDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCD 169
Query: 170 GEQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTG 229
G+ V++T ++ + +FR D +WT I +M + + +V +F GR VD G
Sbjct: 170 GDYKFVLLT------IHVSGKLAVFRSWDRAWTVINDMPSPY-DDVMLFDGRFFAVDNNG 222
Query: 230 RTFMIG-PDLTTHLIAEPVFGGKSKFLVESSEFELLLVDRY--------------ENYRV 274
RT ++ L L+A PVFGG KFL+ES E+LLVD Y E +
Sbjct: 223 RTVVVDYSSLKLTLVASPVFGGDKKFLIESCG-EMLLVDMYLSLEAVEGDPGFVEEIFEH 281
Query: 275 P--------VWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASE-LGFANGNCVI 325
P V V+R E+E+ WV + +L DK+LFLG+ +FSASAS+ L +G+ V
Sbjct: 282 PAFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDILPLCDGSSVF 341
Query: 326 YSKS-YGFHDLNIRKCK-MSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
++ + + DL + + + VF G+ + PEY KLFWPPP WI
Sbjct: 342 FNGNVFNGEDLGAMQDRDLGVFDFRSGKIELVQKLPEYAKLFWPPPPWI 390
>gb|AAT69212.1| hypothetical protein At2g17036 [Arabidopsis thaliana]
Length = 404
Score = 143 bits (361), Expect = 7e-33
Identities = 124/405 (30%), Positives = 193/405 (47%), Gaps = 54/405 (13%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DW+ LP +LL LIS+ L++ L++FRSVCS+WRS++ P + N+P FP +
Sbjct: 1 MMDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPK---RLLWAHNLPFFPSDD 57
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKP--PQHQPSLNPWLIRIGPDF--KGKTQLWHP 116
PF + N+I R+ +I LIKP PQ + L W++++ + K L P
Sbjct: 58 -KPF-LSNVI------LRVAHQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKP 109
Query: 117 FSSGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLH---HLIGGYQSSFIHCVAAVCR--G 170
SS +N + D +K + R L C H + + G+ + + V +
Sbjct: 110 LSSSRNYFPQHLPRIFDMSKFTVREL-CREVKLYHPDYYCVPGHTALELELGKTVVKYLN 168
Query: 171 EQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGR 230
+ V++T E+ + +FR D WT I + S ++ +F GR +D GR
Sbjct: 169 DDKFVLLTILEYGK------LAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGR 222
Query: 231 TFMIG-PDLTTHLIAEPVF-GGKSKFLVESSEFELLLVD-----------------RYEN 271
T ++ L A P+ GG KFL+ES E+ LVD +
Sbjct: 223 TVVVDYSSFKLTLAANPLIGGGDKKFLIESCG-EMFLVDIEFCLNEKPEFTGGFYSYFNE 281
Query: 272 YRVPVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASEL---GFANGNCV-IYS 327
V F+L E+EKRWV++ +LGDK+ FLG+ +FSAS +++ G+ V Y+
Sbjct: 282 TTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYT 341
Query: 328 KSYGFHDLNIRKCKMSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
++ R + VF G+ ++ PEY KLFWPPP WI
Sbjct: 342 HEESLVVMDDR--NLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 384
>ref|NP_565403.1| F-box family protein [Arabidopsis thaliana]
Length = 428
Score = 142 bits (357), Expect = 2e-32
Identities = 123/403 (30%), Positives = 192/403 (47%), Gaps = 54/403 (13%)
Query: 3 DWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPNFD 62
DW+ LP +LL LIS+ L++ L++FRSVCS+WRS++ P + N+P FP +
Sbjct: 2 DWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPK---RLLWAHNLPFFPSDD-K 57
Query: 63 PFNIRNIIKSKYITSRLITHTIFLIKP--PQHQPSLNPWLIRIGPDF--KGKTQLWHPFS 118
PF + N+I R+ +I LIKP PQ + L W++++ + K L P S
Sbjct: 58 PF-LSNVI------LRVAHQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKPLS 110
Query: 119 SGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLH---HLIGGYQSSFIHCVAAVCR--GEQ 172
S +N + D +K + R L C H + + G+ + + V + +
Sbjct: 111 SSRNYFPQHLPRIFDMSKFTVREL-CREVKLYHPDYYCVPGHTALELELGKTVVKYLNDD 169
Query: 173 PPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTF 232
V++T E+ + +FR D WT I + S ++ +F GR +D GRT
Sbjct: 170 KFVLLTILEYGK------LAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTV 223
Query: 233 MIG-PDLTTHLIAEPVF-GGKSKFLVESSEFELLLVD-----------------RYENYR 273
++ L A P+ GG KFL+ES E+ LVD +
Sbjct: 224 VVDYSSFKLTLAANPLIGGGDKKFLIESCG-EMFLVDIEFCLNEKPEFTGGFYSYFNETT 282
Query: 274 VPVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASEL---GFANGNCV-IYSKS 329
V F+L E+EKRWV++ +LGDK+ FLG+ +FSAS +++ G+ V Y+
Sbjct: 283 VSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYTHE 342
Query: 330 YGFHDLNIRKCKMSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
++ R + VF G+ ++ PEY KLFWPPP WI
Sbjct: 343 ESLVVMDDR--NLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 383
>gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana]
Length = 404
Score = 141 bits (356), Expect = 3e-32
Identities = 123/405 (30%), Positives = 192/405 (47%), Gaps = 54/405 (13%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DW+ LP +LL IS+ L++ L++FRSVCS+WRS++ P + N+P FP +
Sbjct: 1 MMDWATLPKDLLDXISKCLESSFDLIQFRSVCSSWRSAAGPK---RLLWAHNLPFFPSDD 57
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKP--PQHQPSLNPWLIRIGPDF--KGKTQLWHP 116
PF + N+I R+ +I LIKP PQ + L W++++ + K L P
Sbjct: 58 -KPF-LSNVI------LRVAHQSILLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKP 109
Query: 117 FSSGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLH---HLIGGYQSSFIHCVAAVCR--G 170
SS +N + D +K + R L C H + + G+ + + V +
Sbjct: 110 LSSSRNYFPQHLPRIFDMSKFTVREL-CREVKLYHPDYYCVPGHTALELELGKTVVKYLN 168
Query: 171 EQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGR 230
+ V++T E+ + +FR D WT I + S ++ +F GR +D GR
Sbjct: 169 DDKFVLLTILEYGK------LAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGR 222
Query: 231 TFMIG-PDLTTHLIAEPVF-GGKSKFLVESSEFELLLVD-----------------RYEN 271
T ++ L A P+ GG KFL+ES E+ LVD +
Sbjct: 223 TVVVDYSSFKLTLAANPLIGGGDKKFLIESCG-EMFLVDIEFCLNEKPEFTGGFYSYFNE 281
Query: 272 YRVPVWIDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASEL---GFANGNCV-IYS 327
V F+L E+EKRWV++ +LGDK+ FLG+ +FSAS +++ G+ V Y+
Sbjct: 282 TTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYT 341
Query: 328 KSYGFHDLNIRKCKMSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
++ R + VF G+ ++ PEY KLFWPPP WI
Sbjct: 342 HEESLVVMDDR--NLGVFDFRSGKTELVNKLPEYAKLFWPPPPWI 384
>gb|AAF18598.1| hypothetical protein [Arabidopsis thaliana] gi|25411773|pir||C84547
hypothetical protein At2g17030 [imported] - Arabidopsis
thaliana
Length = 1169
Score = 120 bits (301), Expect = 7e-26
Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 60/381 (15%)
Query: 28 FRSVCSTWRSSSIPNH---KHKNSSPLNIPQFPEPNFDPFNIRNIIKSKYITSRLITHTI 84
FRSVCS+WRS++ P H N+P FP + PF + N+I R+ +I
Sbjct: 768 FRSVCSSWRSAAGPKRLLWAH------NLPFFPSDD-KPF-LSNVIL------RVAHQSI 813
Query: 85 FLIKP--PQHQPSLNPWLIRIGPDF--KGKTQLWHPFSSGQN-LSSDFNNVLDFNKLSFR 139
LIKP PQ + L W++++ + K L P SS +N + D +K + R
Sbjct: 814 LLIKPNEPQCEADLFGWIVKVWDNIYVSRKMTLLKPLSSSRNYFPQHLPRIFDMSKFTVR 873
Query: 140 VLGCMSYFYLH---HLIGGYQSSFIHCVAAVCR--GEQPPVVVTCGEFTHCDINQGMMMF 194
L C H + + G+ + + V + + V++T E+ + +F
Sbjct: 874 EL-CREVKLYHPDYYCVPGHTALELELGKTVVKYLNDDKFVLLTILEYGK------LAVF 926
Query: 195 RCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIG-PDLTTHLIAEPVFGG-KS 252
R D WT I + S ++ +F GR +D GRT ++ L A P+ GG
Sbjct: 927 RSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYSSFKLTLAANPLIGGGDK 986
Query: 253 KFLVESSEFELLLVD-----------------RYENYRVPVWIDVFRLDEKEKRWVKLAN 295
KFL+ES E+ LVD + V F+L E+EKRWV++ +
Sbjct: 987 KFLIESCG-EMFLVDIEFCLNEKPEFTGGFYSYFNETTVSYKFKFFKLVEREKRWVEVED 1045
Query: 296 LGDKVLFLGNGYSFSASASEL---GFANGNCV-IYSKSYGFHDLNIRKCKMSVFHLDQGQ 351
LGDK+ FLG+ +FSAS +++ G+ V Y+ ++ R + VF G+
Sbjct: 1046 LGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFYTHEESLVVMDDR--NLGVFDFRSGK 1103
Query: 352 ASPLSDYPEYFKLFWPPPEWI 372
++ PEY KLFWPPP WI
Sbjct: 1104 TELVNKLPEYAKLFWPPPPWI 1124
Score = 107 bits (268), Expect = 5e-22
Identities = 87/267 (32%), Positives = 127/267 (46%), Gaps = 30/267 (11%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M DWS LP +LL LIS+ L++ L++FRSVCS+WRS++ P SPL P
Sbjct: 1 MVDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEP------KSPLPTHHLP--- 51
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNP----WLIRIGPDFK--GKTQLW 114
P N ++ + RL +I LIKP H+P + WLI++ D K L
Sbjct: 52 ILPDNGGSLFPDSAVGFRLSQRSILLIKP--HEPCIESDSFGWLIKVEEDLNVPRKVTLL 109
Query: 115 HPFSSGQN-LSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAV----CR 169
P +N + +F VLD +K R LG + + +G S A V C
Sbjct: 110 DPLCDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCD 169
Query: 170 GEQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTG 229
G+ V++T ++ + +FR D +WT I +M + + +V +F GR VD G
Sbjct: 170 GDYKFVLLT------IHVSGKLAVFRSWDRAWTVINDMPSPY-DDVMLFDGRFFAVDNNG 222
Query: 230 RTFMIG-PDLTTHLIAEPVFGGKSKFL 255
RT ++ L L+A PVFGG L
Sbjct: 223 RTVVVDYSSLKLTLVASPVFGGDKNVL 249
>dbj|BAB08727.1| unnamed protein product [Arabidopsis thaliana]
gi|15237878|ref|NP_197792.1| F-box family protein
[Arabidopsis thaliana]
Length = 373
Score = 112 bits (280), Expect = 2e-23
Identities = 98/395 (24%), Positives = 182/395 (45%), Gaps = 49/395 (12%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M WS LP E+L LIS K+D L+ FRSVCS WRSSS+ +H S +P P
Sbjct: 1 MVKWSELPPEILHLISLKIDNPFDLIHFRSVCSFWRSSSLLKFRHMTSLRCPLPLDPGGC 60
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIK-PPQHQPSLNPWLIRIGPDFKGKTQLWHPFSS 119
D +I ++ ++L+K P + +P W+ ++ G+ L H
Sbjct: 61 GDDCHI-------------LSSRVYLLKCPNRDRPQY--WMFKLQAKENGEVVL-HSLFL 104
Query: 120 GQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSF--IHCVAA-------VCRG 170
+N SS + + + LS +L C + + Y F C++ +
Sbjct: 105 RRN-SSAYGCL--YPSLSIDLLNCQIFELAQEHVACYSEWFELFECISKCEERIGFMGLN 161
Query: 171 EQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGR 230
+ + G+ + G+ M+R D+ WT + +S + FKG+ +D+TG+
Sbjct: 162 REKNEYMILGKLSF----NGLAMYRSVDNRWTELEITPDSFFEGIVPFKGKFYAIDRTGK 217
Query: 231 TFMIGP--DLTTHLIAEPVFGGKSKFLVESSEFELLLVD-----RYENYRVP------VW 277
T ++ P ++ T + P + ++L+ + + +L+LV+ RY+ + +P +W
Sbjct: 218 TTVVDPTLEVNTFQRSRPCDKTRKRWLLMTGD-KLILVEMCTKSRYD-FHIPNIREKKIW 275
Query: 278 IDVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNI 337
++ L+E+ W ++ ++ +VLFL + +FS A+E+ N +I+ +G + +
Sbjct: 276 FEISELNEERNDWDQVEDMDGRVLFLEHYCTFSCLATEIPGFRANSIIFMDLWGGSN-SY 334
Query: 338 RKCKMSVFHLDQGQASPLSDYPEYFKLFWPPPEWI 372
+ V+ ++ L D EY +LF PP W+
Sbjct: 335 ELESILVYEFNEKGVRSLRDKLEYIELFPFPPGWV 369
>dbj|BAA96935.1| unnamed protein product [Arabidopsis thaliana]
gi|15238601|ref|NP_200814.1| F-box family protein
[Arabidopsis thaliana]
Length = 374
Score = 90.1 bits (222), Expect = 1e-16
Identities = 104/385 (27%), Positives = 165/385 (42%), Gaps = 45/385 (11%)
Query: 2 ADWSHLPSELLQLISQKLD----TVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFP 57
+ WS LP ++L+LIS +LD + LL RSVC+TWR S ++K+ S
Sbjct: 9 SQWSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLSKF------ 62
Query: 58 EPNFDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNP--WLIRIGPDFKGKTQLWH 115
P + PF + S + T L ++ ++ P LNP L+++ G ++
Sbjct: 63 -PKYLPFWSSSSSSSGFFT--LKQSNVYKLEAP-----LNPRTCLVKLQETTPGIMRVLD 114
Query: 116 PFSSGQN--LSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSF--IHC--VAAVCR 169
FS+ + L +F + +D + R++ + GG F +H V +
Sbjct: 115 LFSNDRICFLPENFPSKIDLQEFHVRLVRRTYRMEYANNGGGAVPCFWSLHSDKVVILSS 174
Query: 170 GEQPPVVVTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPC-VVDKT 228
GE ++ H G + D+ W + N N ++ ++K C VVD
Sbjct: 175 GEDSAIIAI-----HSGGKLGFLKSG-NDEKWKILDNSWNVIYEDIMLYKDNRCIVVDDK 228
Query: 229 GRTFMIGPDLTTHLIAEPVFGG--KSKFLVESSEFELLLVDRY--------ENYRVPVWI 278
G+T + D +AE + GG K LVE S E+ LVD+Y + + V
Sbjct: 229 GKTVIYDVDFKVSDLAEGLVGGGGHKKHLVECSGGEVFLVDKYVKTVWCKSDISKSVVEF 288
Query: 279 DVFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSK-SYGFHDLNI 337
V+ L +EKRW ++ +LGD LF+G+ SFS + G G + YS G I
Sbjct: 289 RVYNLKREEKRWEEVRDLGDVALFIGDDCSFSVQ-NPAGDLAGGFIFYSDYRNGGRSRGI 347
Query: 338 RKCKMSVFHLDQGQASPLSDYPEYF 362
VF++D S P YF
Sbjct: 348 CSDGDGVFNVDMQGDFVFSIKPNYF 372
>gb|AAD38258.1| Hypothetical Protein [Arabidopsis thaliana] gi|25404500|pir||F96671
hypothetical protein F13O11.14 [imported] - Arabidopsis
thaliana
Length = 383
Score = 75.1 bits (183), Expect = 3e-12
Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 36/349 (10%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M +WS LP ELL LIS+ LD ++ RS+C +WRS+ S L+ + P
Sbjct: 1 MPNWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSA------FPFPSSLSTLSYSLPT 54
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIR-IGPDFKGK-TQLWHPFS 118
F F + + T + I IFL + + + + I D +L P
Sbjct: 55 FAKFPL---VSKDLCTLKKIQ--IFLFRARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 109
Query: 119 SGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVVVT 178
+ ++ N L ++++ + + Y+ +IG S + V PV
Sbjct: 110 CSVKVKFPQSDPFLVNMLDYQIIP-LGFQYI--MIGWDPESLANGYVGVAF---LPVKKN 163
Query: 179 CGE--FTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGP 236
G+ +++ R + W + S + + F+GR V G ++ P
Sbjct: 164 GGDEFVVLLRYRNHLLVLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDP 223
Query: 237 ---DLTTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-------VFRLDEK 286
+ T + +EP+ SK+L+ + EL LV+++ + +D V RLDE+
Sbjct: 224 YSLEQTLLMPSEPL--RSSKYLIPNGSDELFLVEKFNPFPEADVLDLSRFACRVSRLDEE 281
Query: 287 EKRWVKLANLGDKVLFLGNGYSFSASASELG---FANGNCVIYSKSYGF 332
+WV++ +LGD+VLF+G+ + SA EL +GN ++++ G+
Sbjct: 282 AGQWVEVIDLGDRVLFIGHFGNVCCSAKELPDGCGVSGNSILFTNEPGY 330
>ref|NP_176664.2| F-box family protein [Arabidopsis thaliana]
Length = 384
Score = 75.1 bits (183), Expect = 3e-12
Identities = 84/349 (24%), Positives = 151/349 (43%), Gaps = 36/349 (10%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPN 60
M +WS LP ELL LIS+ LD ++ RS+C +WRS+ S L+ + P
Sbjct: 2 MPNWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSA------FPFPSSLSTLSYSLPT 55
Query: 61 FDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIR-IGPDFKGK-TQLWHPFS 118
F F + + T + I IFL + + + + I D +L P
Sbjct: 56 FAKFPL---VSKDLCTLKKIQ--IFLFRARNPAADIPEYFLGGIDQDQSNDHMELPSPLQ 110
Query: 119 SGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVVVT 178
+ ++ N L ++++ + + Y+ +IG S + V PV
Sbjct: 111 CSVKVKFPQSDPFLVNMLDYQIIP-LGFQYI--MIGWDPESLANGYVGVAF---LPVKKN 164
Query: 179 CGE--FTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGP 236
G+ +++ R + W + S + + F+GR V G ++ P
Sbjct: 165 GGDEFVVLLRYRNHLLVLRSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLNGDIYVFDP 224
Query: 237 ---DLTTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-------VFRLDEK 286
+ T + +EP+ SK+L+ + EL LV+++ + +D V RLDE+
Sbjct: 225 YSLEQTLLMPSEPL--RSSKYLIPNGSDELFLVEKFNPFPEADVLDLSRFACRVSRLDEE 282
Query: 287 EKRWVKLANLGDKVLFLGNGYSFSASASELG---FANGNCVIYSKSYGF 332
+WV++ +LGD+VLF+G+ + SA EL +GN ++++ G+
Sbjct: 283 AGQWVEVIDLGDRVLFIGHFGNVCCSAKELPDGCGVSGNSILFTNEPGY 331
>gb|AAO23598.1| At2g24250/F27D4.16 [Arabidopsis thaliana]
gi|20197499|gb|AAD03386.2| Expressed protein
[Arabidopsis thaliana] gi|14335044|gb|AAK59786.1|
At2g24250/F27D4.16 [Arabidopsis thaliana]
gi|18400492|ref|NP_565565.1| F-box family protein
[Arabidopsis thaliana]
Length = 374
Score = 70.1 bits (170), Expect = 1e-10
Identities = 101/371 (27%), Positives = 145/371 (38%), Gaps = 63/371 (16%)
Query: 1 MADWSHLPSELLQLISQKL-DTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEP 59
M DWS LP ELL +IS L D + RSVC +WRS+ P ++P FP
Sbjct: 13 MPDWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRST-FPFPSSLLRQSYSLPAFP-- 69
Query: 60 NFDPFNIRNIIKSKYITSRLITHTIFLIK----PPQHQPSLNPWLIRIGPDFKGK-TQLW 114
++SK + L +FL + P S +L +G D +L
Sbjct: 70 ----------LESKDLCCTLEKVPLFLFRVLTPPDAADASSEYFLGGLGQDKSNDHVELP 119
Query: 115 HPFSSGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPP 174
P ++ + N L +++ + L +IG + A + EQ
Sbjct: 120 SPLQCSVKVNVPGTEPILMNMLDCQIIPLGHKYRL--MIGCNPEEY--SAAFLPLNEQGG 175
Query: 175 VVVTCGEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFM 233
GEF D ++ R + W + S + + F+GR G TF+
Sbjct: 176 G----GEFVALLDCTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFV 231
Query: 234 IGPD------LTTHLIAEPVFGGKSKFLVESSEFELLLVDR-YENYRVPVWIDVFRLDEK 286
I P LT H+ S FLV S EL LV + RV RLDE+
Sbjct: 232 IDPSSLEATPLTPHI--------DSNFLVPSGNEELFLVKTDFLRCRVS------RLDEE 277
Query: 287 EKRWVKLANLGDKVLFLGNGY-SFSASASELGFANG------------NCVIYSKSYGFH 333
WV++++LGD+VLFLG +F SA EL G V Y YG H
Sbjct: 278 AAEWVEVSDLGDRVLFLGGHLGNFYCSAKELPHGCGLTGDSILFTVGSRNVTYPYKYGVH 337
Query: 334 DLNIRKCKMSV 344
N RK + ++
Sbjct: 338 -TNKRKAEDNI 347
>pir||D84634 hypothetical protein At2g24250 [imported] - Arabidopsis thaliana
Length = 695
Score = 70.1 bits (170), Expect = 1e-10
Identities = 101/371 (27%), Positives = 145/371 (38%), Gaps = 63/371 (16%)
Query: 1 MADWSHLPSELLQLISQKL-DTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEP 59
M DWS LP ELL +IS L D + RSVC +WRS+ P ++P FP
Sbjct: 334 MPDWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRST-FPFPSSLLRQSYSLPAFP-- 390
Query: 60 NFDPFNIRNIIKSKYITSRLITHTIFLIK----PPQHQPSLNPWLIRIGPDFKGK-TQLW 114
++SK + L +FL + P S +L +G D +L
Sbjct: 391 ----------LESKDLCCTLEKVPLFLFRVLTPPDAADASSEYFLGGLGQDKSNDHVELP 440
Query: 115 HPFSSGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPP 174
P ++ + N L +++ + L +IG + A + EQ
Sbjct: 441 SPLQCSVKVNVPGTEPILMNMLDCQIIPLGHKYRL--MIGCNPEEY--SAAFLPLNEQGG 496
Query: 175 VVVTCGEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFM 233
GEF D ++ R + W + S + + F+GR G TF+
Sbjct: 497 G----GEFVALLDCTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFV 552
Query: 234 IGPD------LTTHLIAEPVFGGKSKFLVESSEFELLLVDR-YENYRVPVWIDVFRLDEK 286
I P LT H+ S FLV S EL LV + RV RLDE+
Sbjct: 553 IDPSSLEATPLTPHI--------DSNFLVPSGNEELFLVKTDFLRCRVS------RLDEE 598
Query: 287 EKRWVKLANLGDKVLFLGNGY-SFSASASELGFANG------------NCVIYSKSYGFH 333
WV++++LGD+VLFLG +F SA EL G V Y YG H
Sbjct: 599 AAEWVEVSDLGDRVLFLGGHLGNFYCSAKELPHGCGLTGDSILFTVGSRNVTYPYKYGVH 658
Query: 334 DLNIRKCKMSV 344
N RK + ++
Sbjct: 659 -TNKRKAEDNI 668
Score = 51.6 bits (122), Expect = 4e-05
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 180 GEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGPDL 238
GEF +++ +++ + W + N+ + ++ F+GR + +G+ +I P
Sbjct: 142 GEFVVLLEVSDTLLVLTSAEMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDPYS 201
Query: 239 --TTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-----VFRLDEKEKRWV 291
T L++ P + + LV + EL LV+ V + V R+DEK +WV
Sbjct: 202 LEVTLLLSSPQDPRELRSLVPYGKDELFLVEVIIPNDVVIDFSRLARRVRRVDEKAGKWV 261
Query: 292 KLANLGDKVLFLGN----------GYSFSASASELGFANGNCVIYSKSYGFHDLNIRKCK 341
++ +LGD VL LGN G+ + +A G +GN +Y K DL
Sbjct: 262 EVGDLGDCVLLLGNLSCSAKEFPRGFGLTENAVLFGDQSGNAFLYYKQSAVKDLKGESSS 321
Query: 342 MSV 344
M++
Sbjct: 322 MAM 324
>gb|AAD22308.1| hypothetical protein [Arabidopsis thaliana]
gi|15226725|ref|NP_179224.1| F-box family protein
[Arabidopsis thaliana] gi|25370647|pir||G84538
hypothetical protein At2g16290 [imported] - Arabidopsis
thaliana
Length = 415
Score = 65.1 bits (157), Expect = 3e-09
Identities = 47/153 (30%), Positives = 79/153 (50%), Gaps = 16/153 (10%)
Query: 191 MMMFRCGDDSWTTIPNMSNSHG-GNVCVFKGRPCVVDKTGRTFMIGPDLTTHLIAEPVFG 249
++M+R + SWT + ++ ++ FKG+ +D +GR + +L+ + P
Sbjct: 206 LVMYRSRNMSWTQVVEHPETYAYQDLVAFKGKFYALDSSGRGRVFVVELSLRVTEIPSVK 265
Query: 250 GKS----KFLVESSEFELLLVDR-------YENYRVPVWIDVFRLDEK--EKRWVKLANL 296
G + LV+ E ELLLV R Y+ Y + W VFRLDE+ +++WV++ L
Sbjct: 266 GSQYCSKESLVQLGE-ELLLVQRFIPAGRRYDEY-IYTWFKVFRLDEEGGKRKWVQVNYL 323
Query: 297 GDKVLFLGNGYSFSASASELGFANGNCVIYSKS 329
D+V+FLG S +L AN NC+++ S
Sbjct: 324 NDRVIFLGARTKLCCSVHKLPGANENCIVFLAS 356
Score = 46.2 bits (108), Expect = 0.002
Identities = 21/37 (56%), Positives = 28/37 (74%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRS 37
MADWS LP++LL+LI L+T ++ FRSVC +WRS
Sbjct: 1 MADWSLLPNDLLELIVGHLETSFEIVLFRSVCRSWRS 37
>pir||C84555 hypothetical protein At2g17690 [imported] - Arabidopsis thaliana
gi|15227882|ref|NP_179360.1| F-box family protein
[Arabidopsis thaliana]
Length = 421
Score = 58.5 bits (140), Expect = 3e-07
Identities = 46/119 (38%), Positives = 56/119 (46%), Gaps = 23/119 (19%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSS-SIPNHKHKNSSPLNIPQFPEP 59
M DWS LP ELL LI+ +L +V+ L+RFRS+C +WRSS S N H SSPL
Sbjct: 1 MGDWSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKNHSLSSPLIY------ 54
Query: 60 NFDPFNI-------RNIIKSKY---ITSRLITHTIFLIKPPQHQPSLNPWLIRIGPDFK 108
F P I I SKY + SR + L P WLI+ D K
Sbjct: 55 -FKPLQIILARAQANGQILSKYHGTVLSRATFFRVTLASSPD-----QGWLIKSDTDLK 107
Score = 39.7 bits (91), Expect = 0.15
Identities = 24/89 (26%), Positives = 46/89 (50%), Gaps = 9/89 (10%)
Query: 280 VFRLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNIRK 339
V++ DE+ +WV++ +LGDK + + FS SA E N + ++ ++
Sbjct: 338 VYKNDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLPNSIYFTDK--------KE 389
Query: 340 CKMSVFHLDQGQASPLSDYPE-YFKLFWP 367
++ VF LD G + +S+ + F++F P
Sbjct: 390 EEVKVFKLDDGSITTMSESEQSCFQMFVP 418
>ref|NP_176753.1| F-box family protein [Arabidopsis thaliana]
gi|6686404|gb|AAF23838.1| F1E22.13 [Arabidopsis
thaliana]
Length = 360
Score = 56.2 bits (134), Expect = 2e-06
Identities = 93/391 (23%), Positives = 152/391 (38%), Gaps = 58/391 (14%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKN---SSPLNIPQFP 57
MADWS LP +LL +I+ +L + + L RFRS+C +WR SS+P KN + PL I P
Sbjct: 1 MADWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWR-SSVPGAGKKNPFRTRPL-ILLNP 58
Query: 58 EPNFDPFNIRNIIKSKYITSRLITHTIFLIKPPQHQPSLNPWLIRIGPDF-KGKTQLWHP 116
PN + R + ++++ P Q WLI+ D GK L P
Sbjct: 59 NPNKPLTDHRR--RGEFLSRSAFFRVTLSSSPSQ------GWLIKSDVDVSSGKLHLLDP 110
Query: 117 FSSGQNLSSDFNNVLDFNKLSFRVLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPVV 176
S S +D ++ F + + +H ++ I A+ + ++
Sbjct: 111 LSRLPMEHS--RKRVDLSE--FTITEIREAYQVHDWRTRKETRPIFKRVALVKDKEGDNQ 166
Query: 177 VTCGEFTHCDINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGP 236
V T G MM+ D T ++ V KG+ +D G + I
Sbjct: 167 VLGIRST------GKMMYW---DIKTWKAKEEGYEFSDIIVHKGQTYALDSIGIVYWIRS 217
Query: 237 DLTTHLIAEPVFGGKS---------------KFLVESSEFELLLVDRYENYRVPVWIDVF 281
DL + P+ G + + LV S ++ D Y V V+
Sbjct: 218 DL-KFIRFGPLVGDWTGDRRLVECCGEFYIVERLVGESTWKRKADDTGYEYAKTVGFKVY 276
Query: 282 RLDEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNIRKCK 341
+ D+++ + +++ +LGDK + FS A E N + ++
Sbjct: 277 KFDDEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYFTDD----------TM 326
Query: 342 MSVFHLDQGQASPLSD--YP---EYFKLFWP 367
+ VF LD G S + YP F++F P
Sbjct: 327 IKVFKLDNGNGSSIETTIYPYAQSCFQMFVP 357
>ref|NP_176752.1| F-box family protein [Arabidopsis thaliana]
Length = 362
Score = 55.8 bits (133), Expect = 2e-06
Identities = 82/346 (23%), Positives = 139/346 (39%), Gaps = 43/346 (12%)
Query: 3 DWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHKNSSPLNIPQFPEPNFD 62
DWS+LP ELL +I L +V+ L RFRS+C +WRSS+ +++ P P +FD
Sbjct: 5 DWSNLPEELLHMIVLLLFSVVELKRFRSICRSWRSSTSGVNRNN-----PFPSRPRIHFD 59
Query: 63 PFNIRNIIKS--KYIT--SRLITHTIFLIKPPQHQPSLNPWLIRIGPDF-KGKTQLWHPF 117
P + + S YI+ ++ F + S W+I+ D G+ +L +
Sbjct: 60 PIDPSETLSSDDSYISRPGAFLSRAAF-FRVTLSSSSSKGWMIKSDMDINSGRFRLLNVL 118
Query: 118 SS-GQNLSSDFNNVLDFNKLSFR-VLGCMSYFYLHHLIGGYQSSFIHCVAAVCRGEQPPV 175
S L S+ ++L+F R ++ GYQ S PV
Sbjct: 119 SRYPLRLYSESIDLLEFTVSEIREAYTVLNTAKRRSATKGYQRS-------------APV 165
Query: 176 VVTCGEFTHCDINQGMMM---FRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTF 232
V GE H D G+ D + + H ++ V KG +++
Sbjct: 166 KVKEGE-GHRDGVLGIGRDGNINYWDGNVLSELKQMGDHFSDIIVHKG---LINSDLEIS 221
Query: 233 MIGPDLTTHLI------AEPVFGGKSKFLVE---SSEFELLLVDRYENYRVPVWIDVFRL 283
G L ++ V G ++VE + + D + N R V +++
Sbjct: 222 RFGTSLDENITDGCWGDLRFVEGCGELYIVERLPKNTRKRKAGDFFHNSRT-VGFKAYKM 280
Query: 284 DEKEKRWVKLANLGDKVLFLGNGYSFSASASELGFANGNCVIYSKS 329
DE+ +W+++ LGD +G FS A E+ N + Y+++
Sbjct: 281 DEELAKWIEIKTLGDNAFLMGTDTCFSVLAHEVYGCLPNSIYYTEN 326
>gb|AAM15098.1| hypothetical protein [Arabidopsis thaliana]
gi|18400494|ref|NP_565566.1| hypothetical protein
[Arabidopsis thaliana]
Length = 336
Score = 52.8 bits (125), Expect = 2e-05
Identities = 46/179 (25%), Positives = 80/179 (43%), Gaps = 18/179 (10%)
Query: 180 GEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGPDL 238
GEF +++ +++ + W + N+ + ++ F+GR + +G+ +I P
Sbjct: 142 GEFVVLLEVSDTLLVLTSAEMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDPYS 201
Query: 239 --TTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-----VFRLDEKEKRWV 291
T L++ P + + LV + EL LV+ V + V R+DEK +WV
Sbjct: 202 LEVTLLLSSPQDPRELRSLVPYGKDELFLVEVIIPNDVVIDFSRLARRVRRVDEKAGKWV 261
Query: 292 KLANLGDKVLFLGN----------GYSFSASASELGFANGNCVIYSKSYGFHDLNIRKC 340
++ +LGD VL LGN G+ + +A G +GN +Y K DL C
Sbjct: 262 EVGDLGDCVLLLGNLSCSAKEFPRGFGLTENAVLFGDQSGNAFLYYKQSAVKDLKGESC 320
>gb|AAT68353.1| hypothetical protein At2g24255 [Arabidopsis thaliana]
Length = 336
Score = 50.1 bits (118), Expect = 1e-04
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 18/179 (10%)
Query: 180 GEFTHC-DINQGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVDKTGRTFMIGPDL 238
GEF +++ +++ + W + N+ + ++ F+GR +G+ +I P
Sbjct: 142 GEFVVLLEVSDTLLVLTSAEMRWKQLENVPYTICVDIVTFRGRFYAPFLSGQIVVIDPYS 201
Query: 239 --TTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWID-----VFRLDEKEKRWV 291
T L++ P + + L + EL LV+ V + V R+DEK +WV
Sbjct: 202 LEVTLLLSSPQDPRELRSLAPYGKDELFLVEVIIPNDVVIDFSRLARRVRRVDEKAGKWV 261
Query: 292 KLANLGDKVLFLGN----------GYSFSASASELGFANGNCVIYSKSYGFHDLNIRKC 340
++ +LGD VL LGN G+ + +A G +GN +Y K DL C
Sbjct: 262 EVGDLGDCVLLLGNLSCSAKEFPRGFGLTENAVLFGDQSGNAFLYYKQSAVKDLKGESC 320
>gb|AAD22307.1| hypothetical protein [Arabidopsis thaliana]
gi|25370646|pir||H84538 hypothetical protein At2g16300
[imported] - Arabidopsis thaliana
Length = 467
Score = 48.5 bits (114), Expect = 3e-04
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHK 46
MADWS LP++LL+LI L+T ++ FRSVCS+WRS P + +
Sbjct: 1 MADWSLLPNDLLELIVGHLETSFEIVLFRSVCSSWRSVVPPQDQSR 46
Score = 43.5 bits (101), Expect = 0.010
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 191 MMMFRCGDDSWTTIPNMSNSHG-GNVCVFKGRPCVVDKTGRTFMIGPDLTTHLIAEPVFG 249
++M+R + SWT + + ++ FKG+ +D +GR + +L+ ++ P
Sbjct: 202 LVMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYALDSSGRGRVFVVELSLEVMEIPSVR 261
Query: 250 GKSKFLVES---SEFELLLVDR-------YENYRVPVWIDVFRLDEKEKRWVKLANLGDK 299
G + E+ S ELLLV R Y+ Y + W VFRLDE+E R +
Sbjct: 262 GSQQSSKENLVLSGEELLLVQRFTPEVRHYDEY-LYTWFRVFRLDEEEGRETQT------ 314
Query: 300 VLFLGNGYSFSASASELGFANGNCVIYSKS 329
+ S +L A NC+++ +S
Sbjct: 315 --------NLCCSVHKLPCAKENCIVFIES 336
Score = 35.0 bits (79), Expect = 3.7
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 4 WSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRS 37
WS L ++LL+LI +T ++ RSVCS+WRS
Sbjct: 402 WSLLLNDLLKLIVGHFETSFEIVNLRSVCSSWRS 435
>ref|NP_179225.2| F-box family protein [Arabidopsis thaliana]
Length = 322
Score = 48.5 bits (114), Expect = 3e-04
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 1 MADWSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIPNHKHK 46
MADWS LP++LL+LI L+T ++ FRSVCS+WRS P + +
Sbjct: 1 MADWSLLPNDLLELIVGHLETSFEIVLFRSVCSSWRSVVPPQDQSR 46
Score = 41.6 bits (96), Expect = 0.040
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 191 MMMFRCGDDSWTTIPNMSNSHG-GNVCVFKGRPCVVDKTGRTFMIGPDLTTHLIAEPVFG 249
++M+R + SWT + + ++ FKG+ +D +GR + +L+ ++ P
Sbjct: 202 LVMYRSRNMSWTQVVEHPEKYAYQDLVAFKGKFYALDSSGRGRVFVVELSLEVMEIPSVR 261
Query: 250 GKSKFLVES---SEFELLLVDR-------YENYRVPVWIDVFRLDEKEKR 289
G + E+ S ELLLV R Y+ Y + W VFRLDE+E R
Sbjct: 262 GSQQSSKENLVLSGEELLLVQRFTPEVRHYDEY-LYTWFRVFRLDEEEGR 310
>gb|AAP54659.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|37536140|ref|NP_922372.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
gi|10122057|gb|AAG13446.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 579
Score = 46.6 bits (109), Expect = 0.001
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 189 QGMMMFRCGDDSWTTIPNMSNSHGGNVCVFKGRPCVVD------------------KTGR 230
Q ++ R GD +WT + S G+V G+ +D K +
Sbjct: 160 QKTLVCRRGDAAWTMLFEHGTSEIGSVVFHGGKVYYIDIMSNIVVCDLDADGASGAKCTQ 219
Query: 231 TFMIGPDLTTHLIAEPVFGGKSKFLVESSEFELLLVDRYENYRVPVWIDVFRLDEKEKRW 290
F + ++ + + LV LL+V R+ + P ++++ + K
Sbjct: 220 FFHVRTSVSMLCSCDKFHPERGVHLVACDGEVLLVVLRWGGH--PSLAEIYKPEWKGNHQ 277
Query: 291 VKLA----NLGDKVLFLGNGYSFSASASELGFANGNCVIYSKSYGFHDLNIRKCK-MSVF 345
+ L +LGD LF+G G +FS SA E NCV Y+ D N ++ +SVF
Sbjct: 278 LGLGERVMDLGDHSLFVGRGDTFSLSAKEFPAIKRNCVYYA------DKNYKQQHWISVF 331
Query: 346 HLDQGQASPLSDYPEYFK 363
HL+Q YPE K
Sbjct: 332 HLEQPDVLEEIPYPEELK 349
Score = 34.3 bits (77), Expect = 6.4
Identities = 14/38 (36%), Positives = 25/38 (64%)
Query: 4 WSHLPSELLQLISQKLDTVLCLLRFRSVCSTWRSSSIP 41
WS LP++LL+ +S +L + L VC+ WR++++P
Sbjct: 6 WSSLPADLLREVSGRLYSDADHLHIHQVCTHWRAATLP 43
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.140 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 727,157,934
Number of Sequences: 2540612
Number of extensions: 31865064
Number of successful extensions: 56576
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 56414
Number of HSP's gapped (non-prelim): 174
length of query: 377
length of database: 863,360,394
effective HSP length: 130
effective length of query: 247
effective length of database: 533,080,834
effective search space: 131670965998
effective search space used: 131670965998
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 76 (33.9 bits)
Medicago: description of AC122162.7