BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122162.15 - phase: 0
(342 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565401.1| F-box family protein [Arabidopsis thaliana] 139 2e-31
gb|AAT69212.1| hypothetical protein At2g17036 [Arabidopsis thali... 132 1e-29
ref|NP_565403.1| F-box family protein [Arabidopsis thaliana] 132 1e-29
gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana] 130 4e-29
gb|AAF18598.1| hypothetical protein [Arabidopsis thaliana] gi|25... 106 9e-22
dbj|BAB08727.1| unnamed protein product [Arabidopsis thaliana] g... 87 9e-16
dbj|BAA96935.1| unnamed protein product [Arabidopsis thaliana] g... 79 1e-13
ref|NP_189203.1| F-box family protein [Arabidopsis thaliana] 72 2e-11
gb|AAD38258.1| Hypothetical Protein [Arabidopsis thaliana] gi|25... 70 7e-11
ref|NP_176664.2| F-box family protein [Arabidopsis thaliana] 70 7e-11
dbj|BAA95762.1| unnamed protein product [Arabidopsis thaliana] 70 9e-11
ref|NP_176751.1| F-box family protein [Arabidopsis thaliana] 68 4e-10
ref|NP_176753.1| F-box family protein [Arabidopsis thaliana] gi|... 65 2e-09
gb|AAM15003.1| hypothetical protein [Arabidopsis thaliana] gi|74... 59 2e-07
gb|AAM15098.1| hypothetical protein [Arabidopsis thaliana] gi|18... 52 2e-05
pir||D84634 hypothetical protein At2g24250 [imported] - Arabidop... 52 2e-05
gb|AAO23598.1| At2g24250/F27D4.16 [Arabidopsis thaliana] gi|2019... 52 3e-05
gb|AAD22308.1| hypothetical protein [Arabidopsis thaliana] gi|15... 50 1e-04
gb|AAT68353.1| hypothetical protein At2g24255 [Arabidopsis thali... 50 1e-04
pir||C84555 hypothetical protein At2g17690 [imported] - Arabidop... 47 8e-04
>ref|NP_565401.1| F-box family protein [Arabidopsis thaliana]
Length = 407
Score = 139 bits (349), Expect = 2e-31
Identities = 107/359 (29%), Positives = 172/359 (47%), Gaps = 60/359 (16%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHS-----SPIPNDHNILPFQFPLLKY 58
VDW+ LP+D+L LIS+ L+ DLI+FRSVCS+W S SP+P H P+L
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHH------LPIL-- 53
Query: 59 VPAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITK- 117
PD N + D+ LS+RS L+KP + + ++ WLI++ +
Sbjct: 54 ---PD--NGGSLFPDSAVGFR-----LSQRSILLIKPHEPCIESDSF----GWLIKVEED 99
Query: 118 -NSSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYL 176
N K LL+ P +++ + P ++ KF + L +F + + YL
Sbjct: 100 LNVPRKVTLLD-PLCDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYL 158
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYV 236
V + C G VL T+ + S K +F D+ WT ++++ + D+ LF GRF+
Sbjct: 159 EKAVVKYLDCDGDYKFVLLTI-HVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFA 217
Query: 237 LDQSGQTVTVGPDS-STELAAHPLYQRCVRGKNRKLLVESEGELLLLDI----------- 284
+D +G+TV V S L A P++ G ++K L+ES GE+LL+D+
Sbjct: 218 VDNNGRTVVVDYSSLKLTLVASPVF-----GGDKKFLIESCGEMLLVDMYLSLEAVEGDP 272
Query: 285 --------HQTFFQ----FSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
H F+ K+++ E + W + L D++LF+G +FSASA D+
Sbjct: 273 GFVEEIFEHPAFYMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASASDI 331
>gb|AAT69212.1| hypothetical protein At2g17036 [Arabidopsis thaliana]
Length = 404
Score = 132 bits (333), Expect = 1e-29
Identities = 108/369 (29%), Positives = 178/369 (47%), Gaps = 60/369 (16%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPN----DHNILPFQFPLLKYV 59
+DW LP+D+L LIS+ L+ DLI+FRSVCS+W S+ P HN LPF FP
Sbjct: 2 MDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHN-LPF-FP----- 54
Query: 60 PAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN- 118
+++ + N+ ++ +S L+KP + Q + + W++++ N
Sbjct: 55 ------SDDKPFLSNV------ILRVAHQSILLIKPNEPQCEADLF----GWIVKVWDNI 98
Query: 119 -SSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSY-L 176
S K LL P S ++ HLP + KF+ + L + + D+ H + L
Sbjct: 99 YVSRKMTLLK-PLSSSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALEL 157
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSN-LSTANGDICLFKGRFY 235
+ + K ++L L Y K +F D+ WT +++ + + D+ +F GRF+
Sbjct: 158 ELGKTVVKYLNDDKFVLLTILEY--GKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFF 215
Query: 236 VLDQSGQTVTVGPDS-STELAAHPLYQRCVRGKNRKLLVESEGELLLLDI---------- 284
+D +G+TV V S LAA+PL + G ++K L+ES GE+ L+DI
Sbjct: 216 AIDYNGRTVVVDYSSFKLTLAANPL----IGGGDKKFLIESCGEMFLVDIEFCLNEKPEF 271
Query: 285 --------HQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL---CL 333
++T + K FKL E K+W +++ LGD++ F+G +FSAS D+ C+
Sbjct: 272 TGGFYSYFNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCV 331
Query: 334 PKGKLCHLY 342
G Y
Sbjct: 332 GTGSFVFFY 340
>ref|NP_565403.1| F-box family protein [Arabidopsis thaliana]
Length = 428
Score = 132 bits (333), Expect = 1e-29
Identities = 108/369 (29%), Positives = 178/369 (47%), Gaps = 60/369 (16%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPN----DHNILPFQFPLLKYV 59
+DW LP+D+L LIS+ L+ DLI+FRSVCS+W S+ P HN LPF FP
Sbjct: 1 MDWATLPKDLLDLISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHN-LPF-FP----- 53
Query: 60 PAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN- 118
+++ + N+ ++ +S L+KP + Q + + W++++ N
Sbjct: 54 ------SDDKPFLSNV------ILRVAHQSILLIKPNEPQCEADLF----GWIVKVWDNI 97
Query: 119 -SSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSY-L 176
S K LL P S ++ HLP + KF+ + L + + D+ H + L
Sbjct: 98 YVSRKMTLLK-PLSSSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALEL 156
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSN-LSTANGDICLFKGRFY 235
+ + K ++L L Y K +F D+ WT +++ + + D+ +F GRF+
Sbjct: 157 ELGKTVVKYLNDDKFVLLTILEY--GKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFF 214
Query: 236 VLDQSGQTVTVGPDS-STELAAHPLYQRCVRGKNRKLLVESEGELLLLDI---------- 284
+D +G+TV V S LAA+PL + G ++K L+ES GE+ L+DI
Sbjct: 215 AIDYNGRTVVVDYSSFKLTLAANPL----IGGGDKKFLIESCGEMFLVDIEFCLNEKPEF 270
Query: 285 --------HQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL---CL 333
++T + K FKL E K+W +++ LGD++ F+G +FSAS D+ C+
Sbjct: 271 TGGFYSYFNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCV 330
Query: 334 PKGKLCHLY 342
G Y
Sbjct: 331 GTGSFVFFY 339
>gb|AAO37162.1| hypothetical protein [Arabidopsis thaliana]
Length = 404
Score = 130 bits (328), Expect = 4e-29
Identities = 107/369 (28%), Positives = 177/369 (46%), Gaps = 60/369 (16%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPN----DHNILPFQFPLLKYV 59
+DW LP+D+L IS+ L+ DLI+FRSVCS+W S+ P HN LPF FP
Sbjct: 2 MDWATLPKDLLDXISKCLESSFDLIQFRSVCSSWRSAAGPKRLLWAHN-LPF-FP----- 54
Query: 60 PAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN- 118
+++ + N+ ++ +S L+KP + Q + + W++++ N
Sbjct: 55 ------SDDKPFLSNV------ILRVAHQSILLIKPNEPQCEADLF----GWIVKVWDNI 98
Query: 119 -SSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSY-L 176
S K LL P S ++ HLP + KF+ + L + + D+ H + L
Sbjct: 99 YVSRKMTLLK-PLSSSRNYFPQHLPRIFDMSKFTVRELCREVKLYHPDYYCVPGHTALEL 157
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSN-LSTANGDICLFKGRFY 235
+ + K ++L L Y K +F D+ WT +++ + + D+ +F GRF+
Sbjct: 158 ELGKTVVKYLNDDKFVLLTILEY--GKLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFF 215
Query: 236 VLDQSGQTVTVGPDS-STELAAHPLYQRCVRGKNRKLLVESEGELLLLDI---------- 284
+D +G+TV V S LAA+PL + G ++K L+ES GE+ L+DI
Sbjct: 216 AIDYNGRTVVVDYSSFKLTLAANPL----IGGGDKKFLIESCGEMFLVDIEFCLNEKPEF 271
Query: 285 --------HQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL---CL 333
++T + K FKL E K+W +++ LGD++ F+G +FSAS D+ C+
Sbjct: 272 TGGFYSYFNETTVSYKFKFFKLVEREKRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCV 331
Query: 334 PKGKLCHLY 342
G Y
Sbjct: 332 GTGSFVFFY 340
>gb|AAF18598.1| hypothetical protein [Arabidopsis thaliana] gi|25411773|pir||C84547
hypothetical protein At2g17030 [imported] - Arabidopsis
thaliana
Length = 1169
Score = 106 bits (265), Expect = 9e-22
Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 32/265 (12%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHS-----SPIPNDHNILPFQFPLLKY 58
VDW+ LP+D+L LIS+ L+ DLI+FRSVCS+W S SP+P H P+L
Sbjct: 2 VDWSTLPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHH------LPIL-- 53
Query: 59 VPAPDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITK- 117
PD N + D+ LS+RS L+KP + + ++ WLI++ +
Sbjct: 54 ---PD--NGGSLFPDSAVGFR-----LSQRSILLIKPHEPCIESDSF----GWLIKVEED 99
Query: 118 -NSSGKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYL 176
N K LL+ P +++ + P ++ KF + L +F + + YL
Sbjct: 100 LNVPRKVTLLD-PLCDTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYL 158
Query: 177 YPQTVLAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYV 236
V + C G VL T+ + S K +F D+ WT ++++ + D+ LF GRF+
Sbjct: 159 EKAVVKYLDCDGDYKFVLLTI-HVSGKLAVFRSWDRAWTVINDMPSPYDDVMLFDGRFFA 217
Query: 237 LDQSGQTVTVGPDS-STELAAHPLY 260
+D +G+TV V S L A P++
Sbjct: 218 VDNNGRTVVVDYSSLKLTLVASPVF 242
Score = 106 bits (265), Expect = 9e-22
Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 60/343 (17%)
Query: 30 FRSVCSTWHSSPIPND----HNILPFQFPLLKYVPAPDSINNNNEIIDNINNANTSFCYL 85
FRSVCS+W S+ P HN L + P+ D +N I+ +
Sbjct: 768 FRSVCSSWRSAAGPKRLLWAHN--------LPFFPSDDKPFLSNVILR-----------V 808
Query: 86 SKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNS--SGKTQLLNPPFVSLKSTAFSHLPN 143
+ +S L+KP + Q + + W++++ N S K LL P S ++ HLP
Sbjct: 809 AHQSILLIKPNEPQCEADLF----GWIVKVWDNIYVSRKMTLLKP-LSSSRNYFPQHLPR 863
Query: 144 AVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSY-LYPQTVLAVTCHGKKPLVLGTLSYCSS 202
+ KF+ + L + + D+ H + L + + K ++L L Y
Sbjct: 864 IFDMSKFTVRELCREVKLYHPDYYCVPGHTALELELGKTVVKYLNDDKFVLLTILEY--G 921
Query: 203 KPVLFHDQDKRWTPVSN-LSTANGDICLFKGRFYVLDQSGQTVTVGPDS-STELAAHPLY 260
K +F D+ WT +++ + + D+ +F GRF+ +D +G+TV V S LAA+PL
Sbjct: 922 KLAVFRSWDREWTVINDYIPSRCQDLIMFDGRFFAIDYNGRTVVVDYSSFKLTLAANPL- 980
Query: 261 QRCVRGKNRKLLVESEGELLLLDI------------------HQTFFQFSMKIFKLDENR 302
+ G ++K L+ES GE+ L+DI ++T + K FKL E
Sbjct: 981 ---IGGGDKKFLIESCGEMFLVDIEFCLNEKPEFTGGFYSYFNETTVSYKFKFFKLVERE 1037
Query: 303 KKWEKLKKLGDRILFVGSGCSFSASALDL---CLPKGKLCHLY 342
K+W +++ LGD++ F+G +FSAS D+ C+ G Y
Sbjct: 1038 KRWVEVEDLGDKMFFLGDDSTFSASTADIIPRCVGTGSFVFFY 1080
>dbj|BAB08727.1| unnamed protein product [Arabidopsis thaliana]
gi|15237878|ref|NP_197792.1| F-box family protein
[Arabidopsis thaliana]
Length = 373
Score = 86.7 bits (213), Expect = 9e-16
Identities = 82/354 (23%), Positives = 155/354 (43%), Gaps = 67/354 (18%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVPAPD 63
V W+ELP +IL LIS ++D DLI FRSVCS W SS + ++ + PL P
Sbjct: 2 VKWSELPPEILHLISLKIDNPFDLIHFRSVCSFWRSSSLLKFRHMTSLRCPLPL---DPG 58
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSSGKT 123
++ C++ +L+K P + Q W+ ++ +G+
Sbjct: 59 GCGDD--------------CHILSSRVYLLKCPNRDRPQY-------WMFKLQAKENGEV 97
Query: 124 QLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQTVLA 183
+L+ F+ S+A+ L +++ + Q F +H + Y +
Sbjct: 98 -VLHSLFLRRNSSAYGCLYPSLSIDLLNCQI-----------FELAQEHVA-CYSEWFEL 144
Query: 184 VTCHGK---------------KPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGD-I 227
C K + ++LG LS+ + ++ D RWT + + + I
Sbjct: 145 FECISKCEERIGFMGLNREKNEYMILGKLSF--NGLAMYRSVDNRWTELEITPDSFFEGI 202
Query: 228 CLFKGRFYVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQT 287
FKG+FY +D++G+T V P + E+ + C + + R LL+ + +L+ ++
Sbjct: 203 VPFKGKFYAIDRTGKTTVVDP--TLEVNTFQRSRPCDKTRKRWLLMTGDKLILVEMCTKS 260
Query: 288 FFQFSM----------KIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
+ F + +I +L+E R W++++ + R+LF+ C+FS A ++
Sbjct: 261 RYDFHIPNIREKKIWFEISELNEERNDWDQVEDMDGRVLFLEHYCTFSCLATEI 314
>dbj|BAA96935.1| unnamed protein product [Arabidopsis thaliana]
gi|15238601|ref|NP_200814.1| F-box family protein
[Arabidopsis thaliana]
Length = 374
Score = 79.3 bits (194), Expect = 1e-13
Identities = 94/355 (26%), Positives = 160/355 (44%), Gaps = 80/355 (22%)
Query: 6 WTELPRDILFLISQRLDVE----LDLIRFRSVCSTWHSS-PIPNDHNILPFQFPLLKYVP 60
W++LP DIL LIS RLD + + L+ RSVC+TW S P+ N +N L +FP KY+P
Sbjct: 11 WSDLPLDILELISDRLDHDSSDTIHLLCLRSVCATWRLSLPLSNKNNRLS-KFP--KYLP 67
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
S +++++ F L + + + ++ P + R L+++ + +
Sbjct: 68 FWSS-----------SSSSSGFFTLKQSNVYKLEAP---------LNPRTCLVKLQETTP 107
Query: 121 GKTQLLNPPFVSLKSTAF--SHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYP 178
G ++L+ S F + P+ ++ +F + +R + ++ + N G
Sbjct: 108 GIMRVLD--LFSNDRICFLPENFPSKIDLQEFHVRLVRRTYRME-----YANNGGG---- 156
Query: 179 QTVLAVTC----HGKKPLVLGTLSYCSSKPVLFHD----------QDKRWTPVSNL-STA 223
AV C H K ++L + S + H D++W + N +
Sbjct: 157 ----AVPCFWSLHSDKVVILSSGE--DSAIIAIHSGGKLGFLKSGNDEKWKILDNSWNVI 210
Query: 224 NGDICLFK-GRFYVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVE-SEGELLL 281
DI L+K R V+D G+TV D A L G ++K LVE S GE+ L
Sbjct: 211 YEDIMLYKDNRCIVVDDKGKTVIYDVDFKVSDLAEGLVGG---GGHKKHLVECSGGEVFL 267
Query: 282 LD-----------IHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSFS 325
+D I ++ +F +++ L K+WE+++ LGD LF+G CSFS
Sbjct: 268 VDKYVKTVWCKSDISKSVVEF--RVYNLKREEKRWEEVRDLGDVALFIGDDCSFS 320
>ref|NP_189203.1| F-box family protein [Arabidopsis thaliana]
Length = 348
Score = 72.0 bits (175), Expect = 2e-11
Identities = 83/342 (24%), Positives = 131/342 (38%), Gaps = 64/342 (18%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVP 60
M +W++LP ++L LI+ R +D++R RS C +W S+ + + QF +Y+P
Sbjct: 1 MEKTEWSDLPEELLDLIANRYSSNIDVLRIRSTCKSWRSAVAMSKERL---QFRFERYLP 57
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
+N +I +LS +FF + P + L+R R
Sbjct: 58 T-----SNKKIK----------AHLSPTTFFRITLPSSCPNKGWLVRTRQ-----ASKMY 97
Query: 121 GKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQT 180
K LL P L + ++ +K +R + I D
Sbjct: 98 RKITLLCP----LSGERITRSHQTLDLLKVGVSEIRQSYEIQIFDGLKDE---------- 143
Query: 181 VLAVTCHGKKPLVLGTLS-YCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYVLDQ 239
K PL S Y + + + + WT + N DI L GR Y +D
Sbjct: 144 --------KIPLDSEIFSNYIKNSDKIPSEGSRSWTKIKNQVEDFSDIILHMGRIYAVDL 195
Query: 240 SG--------QTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLL---LDIHQTF 288
G Q V SST L + Y C + LVE G+L + L I +
Sbjct: 196 KGAIWWISLSQLTIVQQTSSTPLDYYK-YDSCQDTR----LVEYCGDLCIVHELSITRNH 250
Query: 289 FQFSM--KIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASA 328
Q ++ K++K+DE+ KW ++ LGD L V F+ A
Sbjct: 251 IQRTVGFKVYKMDEDLAKWVEVSCLGDNTLIVACNSCFTVVA 292
>gb|AAD38258.1| Hypothetical Protein [Arabidopsis thaliana] gi|25404500|pir||F96671
hypothetical protein F13O11.14 [imported] - Arabidopsis
thaliana
Length = 383
Score = 70.5 bits (171), Expect = 7e-11
Identities = 84/339 (24%), Positives = 139/339 (40%), Gaps = 42/339 (12%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSS-PIPNDHNILPFQFPLLKYVPAPD 63
+W++LP ++L LIS+ LD D++ RS+C +W S+ P P+ + L + P P
Sbjct: 3 NWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSAFPFPSSLSTLSYSLPTFAKFPL-- 60
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSSGK- 122
+ C L K FL + +L I ++ S
Sbjct: 61 --------------VSKDLCTLKKIQIFLFRARNPAADIPEY-----FLGGIDQDQSNDH 101
Query: 123 TQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFI-IDEDDFTFQNQHGSYLYPQTV 181
+L +P S+K P VN + + L +I I D + N + +
Sbjct: 102 MELPSPLQCSVKVKFPQSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAF---- 157
Query: 182 LAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTAN-GDICLFKGRFYVLDQS 240
L V +G V+ L Y + VL + RW V S A+ + F+GRFYV +
Sbjct: 158 LPVKKNGGDEFVV-LLRYRNHLLVL-RSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLN 215
Query: 241 GQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQTF--------FQFS 292
G P S + P +R ++ L+ EL L++ F +F+
Sbjct: 216 GDIYVFDPYSLEQTLLMP--SEPLRS-SKYLIPNGSDELFLVEKFNPFPEADVLDLSRFA 272
Query: 293 MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
++ +LDE +W ++ LGDR+LF+G + SA +L
Sbjct: 273 CRVSRLDEEAGQWVEVIDLGDRVLFIGHFGNVCCSAKEL 311
>ref|NP_176664.2| F-box family protein [Arabidopsis thaliana]
Length = 384
Score = 70.5 bits (171), Expect = 7e-11
Identities = 84/339 (24%), Positives = 139/339 (40%), Gaps = 42/339 (12%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSS-PIPNDHNILPFQFPLLKYVPAPD 63
+W++LP ++L LIS+ LD D++ RS+C +W S+ P P+ + L + P P
Sbjct: 4 NWSQLPEELLNLISKNLDNCFDVVHARSICRSWRSAFPFPSSLSTLSYSLPTFAKFPL-- 61
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSSGK- 122
+ C L K FL + +L I ++ S
Sbjct: 62 --------------VSKDLCTLKKIQIFLFRARNPAADIPEY-----FLGGIDQDQSNDH 102
Query: 123 TQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFI-IDEDDFTFQNQHGSYLYPQTV 181
+L +P S+K P VN + + L +I I D + N + +
Sbjct: 103 MELPSPLQCSVKVKFPQSDPFLVNMLDYQIIPLGFQYIMIGWDPESLANGYVGVAF---- 158
Query: 182 LAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTAN-GDICLFKGRFYVLDQS 240
L V +G V+ L Y + VL + RW V S A+ + F+GRFYV +
Sbjct: 159 LPVKKNGGDEFVV-LLRYRNHLLVL-RSSEMRWMKVKKTSIASCKGLVSFRGRFYVTFLN 216
Query: 241 GQTVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLDIHQTF--------FQFS 292
G P S + P +R ++ L+ EL L++ F +F+
Sbjct: 217 GDIYVFDPYSLEQTLLMP--SEPLRS-SKYLIPNGSDELFLVEKFNPFPEADVLDLSRFA 273
Query: 293 MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL 331
++ +LDE +W ++ LGDR+LF+G + SA +L
Sbjct: 274 CRVSRLDEEAGQWVEVIDLGDRVLFIGHFGNVCCSAKEL 312
>dbj|BAA95762.1| unnamed protein product [Arabidopsis thaliana]
Length = 377
Score = 70.1 bits (170), Expect = 9e-11
Identities = 90/364 (24%), Positives = 137/364 (36%), Gaps = 79/364 (21%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVP 60
M +W++LP ++L LI+ R +D++R RS C +W S+ + + QF +Y+P
Sbjct: 1 MEKTEWSDLPEELLDLIANRYSSNIDVLRIRSTCKSWRSAVAMSKERL---QFRFERYLP 57
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
+N +I +LS +FF + P + L+R R
Sbjct: 58 -----TSNKKI----------KAHLSPTTFFRITLPSSCPNKGWLVRTRQ-----ASKMY 97
Query: 121 GKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFII-------DE----DDFTFQ 169
K LL P L + ++ +K +R + I DE D F
Sbjct: 98 RKITLLCP----LSGERITRSHQTLDLLKVGVSEIRQSYEIQIFDGLKDEKIPLDSEIFS 153
Query: 170 NQ-HGSYLYPQTV-----------LAVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPV 217
N S P V AV H K + C ++ + + WT +
Sbjct: 154 NYIKNSDKIPSGVFFRVAFLDNIFFAVNYHDNK------IWCCKTR-----EGSRSWTKI 202
Query: 218 SNLSTANGDICLFKGRFYVLDQSG--------QTVTVGPDSSTELAAHPLYQRCVRGKNR 269
N DI L GR Y +D G Q V SST L + Y C +
Sbjct: 203 KNQVEDFSDIILHMGRIYAVDLKGAIWWISLSQLTIVQQTSSTPLDYYK-YDSCQDTR-- 259
Query: 270 KLLVESEGELLL---LDIHQTFFQ--FSMKIFKLDENRKKWEKLKKLGDRILFVGSGCSF 324
LVE G+L + L I + Q K++K+DE+ KW ++ LGD L V F
Sbjct: 260 --LVEYCGDLCIVHELSITRNHIQRTVGFKVYKMDEDLAKWVEVSCLGDNTLIVACNSCF 317
Query: 325 SASA 328
+ A
Sbjct: 318 TVVA 321
>ref|NP_176751.1| F-box family protein [Arabidopsis thaliana]
Length = 371
Score = 67.8 bits (164), Expect = 4e-10
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 56/357 (15%)
Query: 4 VDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPF-QFPLLKYVPAP 62
VDW+ LP ++L I+ R ++ RF S+C +WHSS N PF + PL+ + P
Sbjct: 2 VDWSTLPEELLHFIAARSFSLVEYKRFSSICVSWHSSVSGVKKN--PFHRRPLIDFNPIA 59
Query: 63 DSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN-SSG 121
S + D++ + N +LS+ +FF V + W+I+ + +SG
Sbjct: 60 PS---ETLLEDHVFSCNPG-AFLSRAAFFRVTLSSSPS--------KGWIIKSDMDTNSG 107
Query: 122 KTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQTV 181
+ LLNP L +++ + F+ ++ + + +D G Y ++
Sbjct: 108 RFHLLNP----LSRFPLRISSESLDLLDFTVSEIQESYAVLKDAKGRLPNPG---YQRSA 160
Query: 182 LAVTCHGKKPL--VL-----GTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRF 234
L G +L GT++Y + + + DI + KG
Sbjct: 161 LVKVKEGDDHHHGILGIGRDGTINYWNGNVL---------NGFKQMGHHFSDIIVHKGVT 211
Query: 235 YVLDQSGQTVTVGPDSSTELAAHPLYQRCVRGKNRKLL--VESEGELLLL---------D 283
YVLD G + D L + G R + V+ GEL ++
Sbjct: 212 YVLDSKGIVWCINSDLEMSRYETSLDENMTNGCRRYYMRFVDCCGELYVIKRLPKENSRK 271
Query: 284 IHQTFFQFS----MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL--CLP 334
T FQFS K++K+D+ KW ++K LGD + + FS A + CLP
Sbjct: 272 RKSTLFQFSRTAGFKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLP 328
>ref|NP_176753.1| F-box family protein [Arabidopsis thaliana]
gi|6686404|gb|AAF23838.1| F1E22.13 [Arabidopsis
thaliana]
Length = 360
Score = 65.5 bits (158), Expect = 2e-09
Identities = 83/341 (24%), Positives = 139/341 (40%), Gaps = 52/341 (15%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQF-PLLKYVPAPD 63
DW+ LP D+L +I+ RL ++L RFRS+C +W SS +P PF+ PL+ P P
Sbjct: 3 DWSTLPVDLLNMIAGRLFSNIELKRFRSICRSWRSS-VPGAGKKNPFRTRPLILLNPNP- 60
Query: 64 SINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKN-SSGK 122
N + D+ +LS+ +FF V Q WLI+ + SSGK
Sbjct: 61 ----NKPLTDHRRRGE----FLSRSAFFRVTLSSSPSQ--------GWLIKSDVDVSSGK 104
Query: 123 TQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIIDEDDFTFQNQHGSYLYPQTVL 182
LL+P L H V+ +F+ +R + + + + ++ + L
Sbjct: 105 LHLLDP----LSRLPMEHSRKRVDLSEFTITEIREAYQVHD---WRTRKETRPIFKRVAL 157
Query: 183 AVTCHGKKPLVLGTLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYVLDQSGQ 242
G + L S+ +++ D K W DI + KG+ Y LD G
Sbjct: 158 VKDKEGDNQV----LGIRSTGKMMYWD-IKTW-KAKEEGYEFSDIIVHKGQTYALDSIGI 211
Query: 243 TVTVGPDSSTELAAHPLYQRCVRGKNRKLLVESEGELLLLD-----------IHQTFFQF 291
+ D + PL + LVE GE +++ T +++
Sbjct: 212 VYWIRSDLKF-IRFGPLVGDWTGDRR---LVECCGEFYIVERLVGESTWKRKADDTGYEY 267
Query: 292 S----MKIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASA 328
+ K++K D+ + K ++K LGD+ + + FS A
Sbjct: 268 AKTVGFKVYKFDDEQGKMMEVKSLGDKAFVIATDTCFSVLA 308
>gb|AAM15003.1| hypothetical protein [Arabidopsis thaliana] gi|7487201|pir||T02608
hypothetical protein At2g26160 [imported] - Arabidopsis
thaliana gi|15225256|ref|NP_180185.1| F-box family
protein [Arabidopsis thaliana]
Length = 359
Score = 59.3 bits (142), Expect = 2e-07
Identities = 76/324 (23%), Positives = 130/324 (39%), Gaps = 61/324 (18%)
Query: 1 MASVDWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHNILPFQFPLLKYVP 60
M +W+ELP D++ L + R D++R RS+C W S+ P F
Sbjct: 1 MEKPEWSELPGDLINLTANRFSSISDVLRVRSICKPWRSAA------ATPKSFQC----- 49
Query: 61 APDSINNNNEIIDNINNANTSFCYLSKRSFFLVKPPQEQQQQETLIRCRPWLIQITKNSS 120
++ ++N++I+ + LS +FF V P + LIR + Q++++S
Sbjct: 50 ---NLPSSNKMIETV---------LSPTTFFRVTGPSSCSYKGWLIRTK----QVSESS- 92
Query: 121 GKTQLLNPPFVSLKSTAFSHLPNAVNFIKFSAQHLRTDFIID-EDDFTFQNQHGSYLYPQ 179
K LL+P F L + + ++ +KF +R + I D + Q G
Sbjct: 93 -KINLLSPFFRQLLTPS----QQTLDLLKFEVSEIRQSYEIHIFDKYLIQGVIGKEGPSH 147
Query: 180 TVLAVTCHGKKPLVLG---TLSYCSSKPVLFHDQDKRWTPVSNLSTANGDICLFKGRFYV 236
+ V +G + C S + + WT + N DI L KG+ Y
Sbjct: 148 ILSRVVFLDNLIFAVGQDDKIWCCKSG----EESSRIWTKIKNQVEDFLDIILHKGQVYA 203
Query: 237 LDQSGQT--VTVGPDSSTELAA-----HPLYQRCVRGKNRKLLVESEGELLLLD------ 283
LD +G +++ P S + + Y C K LVE G+L ++
Sbjct: 204 LDLTGAIWWISLSPLSLLQFTPSIPMDYDGYDSC-----NKRLVEYCGDLCIIHQLRLKK 258
Query: 284 --IHQTFFQFSMKIFKLDENRKKW 305
I ++ K++K+DE KW
Sbjct: 259 AYIRRSQRTVGFKVYKMDEYVAKW 282
>gb|AAM15098.1| hypothetical protein [Arabidopsis thaliana]
gi|18400494|ref|NP_565566.1| hypothetical protein
[Arabidopsis thaliana]
Length = 336
Score = 52.4 bits (124), Expect = 2e-05
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 211 DKRWTPVSNLS-TANGDICLFKGRFYVLDQSGQTVTVGPDS--STELAAHPLYQRCVR-- 265
+ RW + N+ T DI F+GRFY L SGQ V + P S T L + P R +R
Sbjct: 161 EMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDPYSLEVTLLLSSPQDPRELRSL 220
Query: 266 ---GKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGS-G 321
GK+ LVE ++ D+ F + + ++ ++DE KW ++ LGD +L +G+
Sbjct: 221 VPYGKDELFLVE---VIIPNDVVIDFSRLARRVRRVDEKAGKWVEVGDLGDCVLLLGNLS 277
Query: 322 CS 323
CS
Sbjct: 278 CS 279
>pir||D84634 hypothetical protein At2g24250 [imported] - Arabidopsis thaliana
Length = 695
Score = 52.4 bits (124), Expect = 2e-05
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 211 DKRWTPVSNLS-TANGDICLFKGRFYVLDQSGQTVTVGPDS--STELAAHPLYQRCVR-- 265
+ RW + N+ T DI F+GRFY L SGQ V + P S T L + P R +R
Sbjct: 161 EMRWKQLENVPYTICVDIVTFRGRFYALFLSGQIVVIDPYSLEVTLLLSSPQDPRELRSL 220
Query: 266 ---GKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGS-G 321
GK+ LVE ++ D+ F + + ++ ++DE KW ++ LGD +L +G+
Sbjct: 221 VPYGKDELFLVE---VIIPNDVVIDFSRLARRVRRVDEKAGKWVEVGDLGDCVLLLGNLS 277
Query: 322 CS 323
CS
Sbjct: 278 CS 279
Score = 51.6 bits (122), Expect = 3e-05
Identities = 41/134 (30%), Positives = 65/134 (47%), Gaps = 12/134 (8%)
Query: 200 CSSKPVLFHDQDKRWTPVSNLSTAN-GDICLFKGRFYVLDQSGQTVTVGPDSSTELAAHP 258
C+ ++ + RW + STA+ ++ F+GRFY +G T + P S L A P
Sbjct: 506 CTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFVIDPSS---LEATP 562
Query: 259 LYQRCVRGKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFV 318
L + LV S E L L + F + ++ +LDE +W ++ LGDR+LF+
Sbjct: 563 LTPHI----DSNFLVPSGNEELFL-VKTDFLR--CRVSRLDEEAAEWVEVSDLGDRVLFL 615
Query: 319 GSGC-SFSASALDL 331
G +F SA +L
Sbjct: 616 GGHLGNFYCSAKEL 629
Score = 38.1 bits (87), Expect = 0.38
Identities = 18/42 (42%), Positives = 27/42 (63%), Gaps = 2/42 (4%)
Query: 5 DWTELPRDILFLISQRL-DVELDLIRFRSVCSTWHSS-PIPN 44
DW++LP ++L +IS L D D + RSVC +W S+ P P+
Sbjct: 336 DWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRSTFPFPS 377
>gb|AAO23598.1| At2g24250/F27D4.16 [Arabidopsis thaliana]
gi|20197499|gb|AAD03386.2| Expressed protein
[Arabidopsis thaliana] gi|14335044|gb|AAK59786.1|
At2g24250/F27D4.16 [Arabidopsis thaliana]
gi|18400492|ref|NP_565565.1| F-box family protein
[Arabidopsis thaliana]
Length = 374
Score = 51.6 bits (122), Expect = 3e-05
Identities = 41/134 (30%), Positives = 65/134 (47%), Gaps = 12/134 (8%)
Query: 200 CSSKPVLFHDQDKRWTPVSNLSTAN-GDICLFKGRFYVLDQSGQTVTVGPDSSTELAAHP 258
C+ ++ + RW + STA+ ++ F+GRFY +G T + P S L A P
Sbjct: 185 CTDLFLVLRSTEMRWIRLEKPSTASCKELFTFRGRFYATFFNGDTFVIDPSS---LEATP 241
Query: 259 LYQRCVRGKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFV 318
L + LV S E L L + F + ++ +LDE +W ++ LGDR+LF+
Sbjct: 242 LTPHI----DSNFLVPSGNEELFL-VKTDFLR--CRVSRLDEEAAEWVEVSDLGDRVLFL 294
Query: 319 GSGC-SFSASALDL 331
G +F SA +L
Sbjct: 295 GGHLGNFYCSAKEL 308
Score = 38.1 bits (87), Expect = 0.38
Identities = 18/42 (42%), Positives = 27/42 (63%), Gaps = 2/42 (4%)
Query: 5 DWTELPRDILFLISQRL-DVELDLIRFRSVCSTWHSS-PIPN 44
DW++LP ++L +IS L D D + RSVC +W S+ P P+
Sbjct: 15 DWSQLPEELLHIISTHLEDHYFDAVHARSVCRSWRSTFPFPS 56
>gb|AAD22308.1| hypothetical protein [Arabidopsis thaliana]
gi|15226725|ref|NP_179224.1| F-box family protein
[Arabidopsis thaliana] gi|25370647|pir||G84538
hypothetical protein At2g16290 [imported] - Arabidopsis
thaliana
Length = 415
Score = 49.7 bits (117), Expect = 1e-04
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 205 VLFHDQDKRWTPVSNL--STANGDICLFKGRFYVLDQSGQTVTVGPDSS---TELAAHPL 259
V++ ++ WT V + A D+ FKG+FY LD SG+ + S TE+ +
Sbjct: 207 VMYRSRNMSWTQVVEHPETYAYQDLVAFKGKFYALDSSGRGRVFVVELSLRVTEIPSVKG 266
Query: 260 YQRCVRGKNRKLLVESEGELLLLD-------IHQTFFQFSMKIFKLDE--NRKKWEKLKK 310
Q C +++ LV+ ELLL+ + + K+F+LDE ++KW ++
Sbjct: 267 SQYC----SKESLVQLGEELLLVQRFIPAGRRYDEYIYTWFKVFRLDEEGGKRKWVQVNY 322
Query: 311 LGDRILFVGS 320
L DR++F+G+
Sbjct: 323 LNDRVIFLGA 332
Score = 45.1 bits (105), Expect = 0.003
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSPIPNDHN 47
DW+ LP D+L LI L+ +++ FRSVC +W S P DH+
Sbjct: 3 DWSLLPNDLLELIVGHLETSFEIVLFRSVCRSWRSVVPPLDHS 45
>gb|AAT68353.1| hypothetical protein At2g24255 [Arabidopsis thaliana]
Length = 336
Score = 49.7 bits (117), Expect = 1e-04
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 211 DKRWTPVSNLS-TANGDICLFKGRFYVLDQSGQTVTVGPDSS--TELAAHPLYQRCVR-- 265
+ RW + N+ T DI F+GRFY SGQ V + P S T L + P R +R
Sbjct: 161 EMRWKQLENVPYTICVDIVTFRGRFYAPFLSGQIVVIDPYSLEVTLLLSSPQDPRELRSL 220
Query: 266 ---GKNRKLLVESEGELLLLDIHQTFFQFSMKIFKLDENRKKWEKLKKLGDRILFVGS-G 321
GK+ LVE ++ D+ F + + ++ ++DE KW ++ LGD +L +G+
Sbjct: 221 APYGKDELFLVEV---IIPNDVVIDFSRLARRVRRVDEKAGKWVEVGDLGDCVLLLGNLS 277
Query: 322 CS 323
CS
Sbjct: 278 CS 279
>pir||C84555 hypothetical protein At2g17690 [imported] - Arabidopsis thaliana
gi|15227882|ref|NP_179360.1| F-box family protein
[Arabidopsis thaliana]
Length = 421
Score = 47.0 bits (110), Expect = 8e-04
Identities = 23/58 (39%), Positives = 38/58 (64%), Gaps = 5/58 (8%)
Query: 5 DWTELPRDILFLISQRLDVELDLIRFRSVCSTWHSSP--IPNDHNILPFQFPLLKYVP 60
DW++LP ++L LI+ RL ++LIRFRS+C +W SS + +H++ PL+ + P
Sbjct: 3 DWSKLPEELLGLIALRLYSVIELIRFRSICKSWRSSASGVNKNHSL---SSPLIYFKP 57
Score = 37.4 bits (85), Expect = 0.65
Identities = 17/43 (39%), Positives = 26/43 (59%), Gaps = 2/43 (4%)
Query: 294 KIFKLDENRKKWEKLKKLGDRILFVGSGCSFSASALDL--CLP 334
K++K DE KW ++K LGD+ + + + FS SA + CLP
Sbjct: 337 KVYKNDEELLKWVEVKSLGDKAIVIATDACFSVSAHEFYGCLP 379
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.138 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 611,488,162
Number of Sequences: 2540612
Number of extensions: 26505718
Number of successful extensions: 74646
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 74395
Number of HSP's gapped (non-prelim): 304
length of query: 342
length of database: 863,360,394
effective HSP length: 129
effective length of query: 213
effective length of database: 535,621,446
effective search space: 114087367998
effective search space used: 114087367998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)
Medicago: description of AC122162.15