BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC122162.14 - phase: 0
(420 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa (japonica cultiva... 194 6e-48
gb|AAP52238.1| putative retroelement [Oryza sativa (japonica cul... 191 3e-47
ref|XP_475426.1| putative non-LTR retroelement reverse transcrip... 169 2e-40
gb|AAX95804.1| retrotransposon protein, putative, unclassified [... 166 1e-39
gb|AAP53939.1| putative non-LTR retroelement reverse transcripta... 164 4e-39
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 162 2e-38
gb|AAT85026.1| hypothetical protein [Oryza sativa (japonica cult... 161 4e-38
ref|NP_912588.1| Putative non-LTR retroelement reverse transcrip... 159 1e-37
ref|XP_472472.1| OSJNBa0028I23.15 [Oryza sativa (japonica cultiv... 159 2e-37
ref|NP_914522.1| unnamed protein product [Oryza sativa (japonica... 156 1e-36
emb|CAE04648.2| OSJNBa0061G20.4 [Oryza sativa (japonica cultivar... 153 8e-36
gb|AAM08777.1| Putative retroelement [Oryza sativa] 153 8e-36
ref|XP_468883.1| putative reverse transcriptase [Oryza sativa (j... 152 1e-35
ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-gr... 152 1e-35
gb|AAP54692.1| putative reverse transcriptase [Oryza sativa (jap... 152 2e-35
emb|CAI44611.1| P0650D04.15 [Oryza sativa (japonica cultivar-gro... 151 3e-35
gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor] 151 3e-35
gb|AAV25285.1| hypothetical protein [Oryza sativa (japonica cult... 150 9e-35
gb|AAW56921.1| hypothetical protein [Oryza sativa (japonica cult... 150 9e-35
emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa (japonica cultiva... 149 2e-34
>emb|CAE03883.2| OSJNBb0015N08.11 [Oryza sativa (japonica cultivar-group)]
gi|21741977|emb|CAD41785.1| OSJNBa0035M09.1 [Oryza
sativa (japonica cultivar-group)]
gi|50928543|ref|XP_473799.1| OSJNBb0015N08.11 [Oryza
sativa (japonica cultivar-group)]
Length = 1026
Score = 194 bits (492), Expect = 6e-48
Identities = 126/423 (29%), Positives = 205/423 (47%), Gaps = 42/423 (9%)
Query: 1 MRNAVSRNLFKGFKIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKV 60
++ A +L +G D I+ LQYADDT+ + +D+ LK +L FE SGLK+
Sbjct: 463 VQRAEENSLIEGLGTNGDNK-IAILQYADDTIFLINDKLDHAKNLKYILCLFEQLSGLKI 521
Query: 61 NFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRK 120
NF KS + E + + C G +P KYLG+P+ W+ ++ K
Sbjct: 522 NFNKSEVFCFGEAKEKQDLYSNIFTCKVGSLPLKYLGIPIDQKRILNKDWKLAENKMEHK 581
Query: 121 LHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKK 180
L W + S+GGR++LLN+ ++S+P++ +SF ++P V +I + FLW +G +K
Sbjct: 582 LGCWQGRLQSIGGRLILLNSTLSSVPMYMISFYRLPKGVQERIDYFRKRFLWQEDQGIRK 641
Query: 181 LCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKY-GTRVC 239
V W +VC PR +GGLGV D+ +N ++L KW WR L+ EEG W+E++ KY +
Sbjct: 642 YHLVNWPLVCSPRDQGGLGVLDLEAMNKAMLGKWIWR-LENEEGWWQEIIYAKYCSDKPL 700
Query: 240 NLLVEDDGSWPSYISRWWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPF 299
+ L GS S +W+ V ++D+ F + + VG G T FW+D W G P
Sbjct: 701 SGLRLKAGS-----SHFWQGVMEVKDD-----FFSFCTKIVGNGEKTLFWEDSWLGGKPL 750
Query: 300 SRKYPRLFAISNNKETLVEECRQ--------MNGVGGGWIFEWHRPLFVWEEELLISLKE 351
+ ++P L+ I K + + + + G + +W + + WE ++L E
Sbjct: 751 AIQFPSLYGIVITKRITIADLNRKGIDCMKFRRDLHGDKLRDWRKIVNSWEG---LNLVE 807
Query: 352 DLEGHRWVNDPDRWVKSCYGKLERLLGGEVEWSLEELRVLES------IWNSKAPLKVIA 405
+ + W W S GK V L++ ++ IW + PLK+
Sbjct: 808 NCKDKLW------WTLSKDGKF------TVRSFYRALKLQQTSFPNKKIWKFRVPLKIRI 855
Query: 406 FSW 408
F W
Sbjct: 856 FIW 858
>gb|AAP52238.1| putative retroelement [Oryza sativa (japonica cultivar-group)]
gi|37531298|ref|NP_919951.1| putative retroelement
[Oryza sativa (japonica cultivar-group)]
gi|22655797|gb|AAN04214.1| Putative retroelement [Oryza
sativa (japonica cultivar-group)]
Length = 764
Score = 191 bits (486), Expect = 3e-47
Identities = 121/402 (30%), Positives = 200/402 (49%), Gaps = 38/402 (9%)
Query: 21 GISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMA 80
G++HLQYADDT+ + +N+ T+K LL +E SGLK+N+ KS +M I
Sbjct: 213 GLTHLQYADDTILFMTNTEENIVTVKFLLYCYEAMSGLKINYQKSEIMVIGGDEMETQRV 272
Query: 81 CDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNA 140
D NC G +PF YLG+P+ N + ++ ++L +W Y+S GG+ +L+N+
Sbjct: 273 ADLFNCQAGKMPFTYLGIPISMNKLTNADLDIPPNKIEKRLATWKCGYLSYGGKAILINS 332
Query: 141 VINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGV 200
++SIP++ + +P V K+ I+ F W G +K +KW +C+P+ GGLG
Sbjct: 333 CLSSIPLYMMGVYLLPEGVHNKMDSIRARFFWEGLEKKRKYHMIKWEALCRPKEFGGLGF 392
Query: 201 RDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDG----SWPSYISRW 256
D R +N++LL KW +R+ G+E +L KY ++D G S S++
Sbjct: 393 IDTRKMNIALLCKWIYRLESGKEDPCCVLLRNKY--------MKDGGGFFQSKAEESSQF 444
Query: 257 WKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKE-T 315
WK + + ++W + KVG G +T+FW D W G+ P +YP ++ + +KE T
Sbjct: 445 WKGLHEV-----KKWMDLGSSYKVGNGKATNFWSDVWIGETPLKTQYPNIYRMCADKEKT 499
Query: 316 LVEECRQMNGVGGGWIFE-----WHRPLFVWEE----ELLISLKEDLEGHRWVNDPDRWV 366
+ + C + G W E R L W + I LKE+ + W +
Sbjct: 500 VSQMCLE-----GDWYIELRRSLGERDLNEWNDLHNTPREIHLKEERDCIIW-----KLT 549
Query: 367 KSCYGKLERLLGGEVEWSLEELRVLESIWNSKAPLKVIAFSW 408
K+ + K + L +++ +V++ +W S PLKV W
Sbjct: 550 KNGFYKAKTLYQALSFGGVKD-KVMQDLWRSSIPLKVKILFW 590
>ref|XP_475426.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa
(japonica cultivar-group)] gi|46576009|gb|AAT01370.1|
putative non-LTR retroelement reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
Length = 1614
Score = 169 bits (427), Expect = 2e-40
Identities = 99/305 (32%), Positives = 159/305 (51%), Gaps = 17/305 (5%)
Query: 21 GISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMA 80
GI+HLQYADDT+ + K +L FE + LKVN++KS + + +
Sbjct: 1302 GITHLQYADDTVLFVANDDKQIVATKFILYCFEEMAVLKVNYHKSEIFTLGLSDNDTNRV 1361
Query: 81 CDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNA 140
NC G P KYLGLP+G + + ++ L ++L ++L+SWGN +S GR V +N
Sbjct: 1362 AMMFNCPVGQFPMKYLGLPIGPDKILNLGFDFLGQKLEKRLNSWGNN-LSHAGRAVQINT 1420
Query: 141 VINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGV 200
++SIP + + F ++P V +K I+ + W R K VKW + P+ GGLG
Sbjct: 1421 CLSSIPSYAMCFYQLPEGVHQKFGSIRGRYYWARNRLKGKYHMVKWEDLAFPKDYGGLGF 1480
Query: 201 RDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDGSW---PSYISRWW 257
+ R +N +LLAKW ++ ++ L E+L KY ++D G + Y S++W
Sbjct: 1481 TETRRMNTALLAKWIMKIESEDDSLCIELLRRKY--------LQDGGFFQCKERYASQFW 1532
Query: 258 KDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKETLV 317
K + + RW + V +VG G+ SFW+D W G P +P +FA+ N ++ LV
Sbjct: 1533 KGLLNI-----RRWLSLGSVWQVGDGSHISFWRDVWWGQCPLRTLFPAIFAVCNQQDILV 1587
Query: 318 EECRQ 322
+ ++
Sbjct: 1588 SQVKE 1592
>gb|AAX95804.1| retrotransposon protein, putative, unclassified [Oryza sativa
(japonica cultivar-group)]
Length = 849
Score = 166 bits (420), Expect = 1e-39
Identities = 113/402 (28%), Positives = 185/402 (45%), Gaps = 42/402 (10%)
Query: 21 GISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMA 80
G++HLQYADDT+ + N+ T K +L FE SGLK+N+ KS ++ + E
Sbjct: 398 GLTHLQYADDTILFMTNNDQNVITTKFILHCFEAMSGLKINYQKSEVIVLGENPEETKRV 457
Query: 81 CDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNA 140
D NC G P YLG+P+ +++ ++L +W +S GG+ +L
Sbjct: 458 ADLFNCKCGKFPMTYLGIPISEGRLTAADLAIPPDKIEKRLSTWKCGLLSYGGKAIL--- 514
Query: 141 VINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGV 200
+NS P++ + F +P + +++ I+ F W G +K VKW +C+P+ GGLG
Sbjct: 515 -VNSSPMYMMGFYMLPEQTHQRMDSIRSRFFWEGIERKRKYHMVKWEALCRPKDFGGLGF 573
Query: 201 RDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDGSWPSY---ISRWW 257
D RV+N LL KW +++ G++ ++L KY ++ G + S S++W
Sbjct: 574 LDTRVMNKVLLCKWIFKLESGQKDPCCDLLRRKY-------MMNGGGFFQSSTEGCSQFW 626
Query: 258 KDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKETLV 317
+ + + + W +G G++T FW D W GD P K+P +++I + V
Sbjct: 627 RGLHEV-----KHWLKLGSCYDLGDGSATRFWDDVWLGDTPLKIKFPYIYSIVADPGKTV 681
Query: 318 EECRQMNGVGGGWIFEWHR-----PLFVWEEELL----ISLKEDLEGHRW--VNDPDRWV 366
+ + GW + R L WE+ L + L D + RW
Sbjct: 682 SQLWSSD----GWRIDLRRSLGAEELVEWEQLLADLANVHLSTDRDRMRWKLTKSGQFST 737
Query: 367 KSCYGKLERLLGGEVEWSLEELRVLESIWNSKAPLKVIAFSW 408
KS Y E GG + ++EL W + PLK+ F W
Sbjct: 738 KSLY--REMTFGGIRDIKMQEL------WKTPMPLKIKIFVW 771
>gb|AAP53939.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa
(japonica cultivar-group)] gi|37534700|ref|NP_921652.1|
putative non-LTR retroelement reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
Length = 1652
Score = 164 bits (416), Expect = 4e-39
Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 18/295 (6%)
Query: 1 MRNAVSRNLFKGFKIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKV 60
++ A + FKG G+S LQYADDT+ + +D LK +L FE S LK+
Sbjct: 1371 IQRAKDQGRFKGVVPHLVDNGLSILQYADDTILFMDHDLDEARDLKLVLSTFEKLSSLKI 1430
Query: 61 NFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRK 120
NFYKS L + C PFKYLG+ + W+ + E++ +K
Sbjct: 1431 NFYKSELFCYGKAKDVEHEYVKLFGCDTEDYPFKYLGIRMHHKRINNKDWQGVEERIQKK 1490
Query: 121 LHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKK 180
L SW K++S+GGR+VL+N+V++++ IF LSF ++P + +K+ + F W KK
Sbjct: 1491 LSSWKGKFLSVGGRLVLINSVLSNLAIFMLSFFEIPKGILKKLDYYRSRFFWQCDEHKKK 1550
Query: 181 LCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCN 240
+W V+C+P+ GGLG++++ + N LL+KW ++++ EEG+W+++L KY T+
Sbjct: 1551 YRLARWSVLCKPKECGGLGIQNLEIQNKCLLSKWLYKLI-NEEGVWQDILRNKYLTKKTI 1609
Query: 241 LLVE----DDGSWPSYISRWWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKD 291
VE D W + +DV F +GG KVG G+ FW+D
Sbjct: 1610 TQVEKCPGDSHFWAGLMG--VRDVFF---KGG--------AFKVGDGSQIRFWED 1651
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana] gi|25411313|pir||C84487 hypothetical protein
At2g07650 [imported] - Arabidopsis thaliana
Length = 732
Score = 162 bits (409), Expect = 2e-38
Identities = 123/431 (28%), Positives = 196/431 (44%), Gaps = 55/431 (12%)
Query: 3 NAVSRNLFKGFKIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNF 62
++++R +K + G +SH+ +ADD + EASV + ++ +L F +ASG KV+
Sbjct: 182 HSIARKDWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSL 241
Query: 63 YKSCLM-GINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKL 121
KS + NV + + D S KYLG+PV T+ +LE+L+ +L
Sbjct: 242 EKSKIFFSENVSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRL 301
Query: 122 HSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKL 181
W +++SL GR+ L AV++SIP+ +S + +P + K+ FLWG + +K
Sbjct: 302 AGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQ 361
Query: 182 CWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNL 241
+ W+ VC+PRS+GGLG+R + +N +LL+K WR++Q LW ++ CN
Sbjct: 362 HLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIM-------RCNY 414
Query: 242 LVED--DGSWP---SYISRWWKDVAFLEDE---GGERWFNAEVVRKVGCGNSTSFWKDPW 293
V+D DG+W S S W+ VA E G W +G G FW D W
Sbjct: 415 RVQDVRDGAWTKVRSVCSSTWRSVALGMREVVIPGLSWV-------IGDGREILFWMDKW 467
Query: 294 RGDIPFSRKYPRLFAISNNKETLVEE---------CRQMNGVGGGWIFEWHRPLFVWEEE 344
+IP + E LV+E R + G GW P
Sbjct: 468 LTNIPLA-------------ELLVQEPPAGWKGMRARDLRRNGIGWDMATIAPYISSYNR 514
Query: 345 LLIS--LKEDLEGHRWVNDPDRWVKSCYGKLE-----RLLGGEVEWSLEELRVLESIWNS 397
L + + +D+ G R D W +S G+ + L + + R + +W+
Sbjct: 515 LQLQSFVLDDITGAR---DRISWGESQDGRFKVSTTYSFLTRDEAPRQDMKRFFDRVWSV 571
Query: 398 KAPLKVIAFSW 408
AP +V F W
Sbjct: 572 TAPERVRLFLW 582
>gb|AAT85026.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 352
Score = 161 bits (407), Expect = 4e-38
Identities = 99/285 (34%), Positives = 148/285 (51%), Gaps = 17/285 (5%)
Query: 37 ASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYL 96
AS L+ LKALL+ F +GLKVNF+KSCL+ INV + M G +PF YL
Sbjct: 9 ASGKELFVLKALLQSFAQGTGLKVNFHKSCLIPINVSEDKAEMLAGVFGYRTGSMPFTYL 68
Query: 97 GLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMP 156
GLP+G +++ + PL++++ R+L S + ++S G R+ L+N+V +S+P +Y+ L++P
Sbjct: 69 GLPLGTTKPRVIDFAPLVDRIERRL-SANSAFLSNGDRLTLMNSVFSSLPTYYMCILQLP 127
Query: 157 NKVWRKIVKIQCDFLW-GGARGGKKLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWR 215
V I + + LW GG K V W VC+P+ KGGLGV ++ + N +LL K+
Sbjct: 128 KSVIENIDRARRHCLWRGGDINSNKKSLVAWDKVCKPKVKGGLGVINLSIQNQALLLKFL 187
Query: 216 WRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDGSWPSYISRWWKDVAFLED--EGGERWFN 273
+ + W ++ Y L GS+ WWKD+ L D G R
Sbjct: 188 DKFYNRRQVPWVSLIWSSYYENKVPHLAPIKGSF------WWKDICKLMDIYRGISRCI- 240
Query: 274 AEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKETLVE 318
+G G+S SFW D W P S PRL + + NK V+
Sbjct: 241 ------LGNGSSCSFWDDIWSDGPPLSLHMPRLHSFAINKNVSVQ 279
>ref|NP_912588.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa
(japonica cultivar-group)] gi|22748339|gb|AAN05341.1|
Putative non-LTR retroelement reverse transcriptase
[Oryza sativa (japonica cultivar-group)]
Length = 603
Score = 159 bits (403), Expect = 1e-37
Identities = 84/244 (34%), Positives = 137/244 (55%), Gaps = 1/244 (0%)
Query: 1 MRNAVSRNLFKGFKIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKV 60
++ A + F+G G+S LQYADDT+ E +D + LK +L FE +GLK+
Sbjct: 109 IQRAKDQGRFQGVIPHLVDNGLSILQYADDTILFMEHDLDEVKNLKLVLSTFEKLAGLKI 168
Query: 61 NFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRK 120
NF+KS L C G PF+YLG+P+ W+ + E+ RK
Sbjct: 169 NFHKSELFCYGKSKFAENEYVMLFGCRSGTYPFRYLGIPMHHKKLSNKDWQIIEERFQRK 228
Query: 121 LHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKK 180
L SW K +S+GGR+VL+N+V++S+ +F LSF ++P + +K+ + F W +K
Sbjct: 229 LSSWKGKCLSVGGRLVLINSVLSSLAMFMLSFFEVPKGILKKLDYYRSRFFWQSDGHKRK 288
Query: 181 LCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCN 240
+W V+C P+ GGLG++++ V N LL+KW ++++ E+G+W+++L +KY +
Sbjct: 289 YRLARWSVICTPKDCGGLGIQNLNVQNKCLLSKWLYKLI-NEDGVWQKLLRKKYLAKKTI 347
Query: 241 LLVE 244
LVE
Sbjct: 348 TLVE 351
>ref|XP_472472.1| OSJNBa0028I23.15 [Oryza sativa (japonica cultivar-group)]
gi|39546208|emb|CAE04633.3| OSJNBa0028I23.15 [Oryza
sativa (japonica cultivar-group)]
Length = 593
Score = 159 bits (401), Expect = 2e-37
Identities = 113/405 (27%), Positives = 187/405 (45%), Gaps = 38/405 (9%)
Query: 21 GISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMA 80
G+S LQYADDT+ E +++ LK +L FE SGLK+NF+KS L+ E
Sbjct: 126 GLSILQYADDTILFMEHDLEDAKNLKLVLSAFERLSGLKINFHKSELLCFGKAIEVEREY 185
Query: 81 CDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNA 140
C G KYLGLP+ W+ + E+ ++L SW K +S+GGR+VL+N+
Sbjct: 186 ALLFGCKTGSYTLKYLGLPMHYRKLSNKDWKEVEERFQKRLGSWKGKLLSVGGRLVLINS 245
Query: 141 VINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGV 200
V++S+ ++ LSF ++P + +K+ + F W KK +W V+C+P+ GGLG+
Sbjct: 246 VLSSLAMYMLSFFEVPKGIIKKLDYYRSRFFWQSDEHKKKYRLARWSVLCKPKECGGLGI 305
Query: 201 RDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDGSWPSYISRWWKDV 260
+++ V N LL V W+ +L +KY + + V+ S +W +
Sbjct: 306 QNLEVQNKCLLRGLAKLV-------WQNLLRKKYLAKKTIMQVQKQRG----DSHFWTGL 354
Query: 261 AFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKETLVEEC 320
++D F++ K+ G FW+D W G+ + YP L+ + NK +V +
Sbjct: 355 MGVKDT-----FSSFGSFKLQDGLQIRFWEDCWLGNQSLEKIYPSLYNLVRNKNVVVAKV 409
Query: 321 RQ--------MNGVGGGWIFEWHRPLFVWEEELLISLKEDLEGHRW--VNDPDRWVKSCY 370
+ + G + WH + + I+L+ + W + V S Y
Sbjct: 410 LERVPLNVSFRRAIIGDNLKAWHE---IVANVVDINLRGQKDRFTWDASKNGTFTVNSMY 466
Query: 371 GKLERLLGGEVEWSLEELRVLESIWNSKAPLKVIAFSWKLDESLL 415
KL + G + IW + PLK+ F W L E ++
Sbjct: 467 KKL--MFGNVIPRQ-------SFIWKLRLPLKIKIFLWYLKEGVI 502
>ref|NP_914522.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 486
Score = 156 bits (395), Expect = 1e-36
Identities = 112/381 (29%), Positives = 181/381 (47%), Gaps = 32/381 (8%)
Query: 45 LKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANS 104
+KA+L FE SGLK+NF+KS + E C+ G PF+YLG+P+
Sbjct: 1 MKAILCVFEHLSGLKINFHKSEIFCFGGAKEMEDQYRQLFGCNSGSFPFRYLGIPIHYRK 60
Query: 105 FKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIV 164
+ W+ + + RKL +W K S GGR+VLLN+V++S+P+F L F ++P V +++
Sbjct: 61 LRNSDWKCVEDMFQRKLSTWKGKNNSYGGRLVLLNSVLSSLPMFMLLFFEIPRGVLQRLD 120
Query: 165 KIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEG 224
+ F W KK KW + + + +GGLGV ++ ++N LL+KW +++L G EG
Sbjct: 121 YYRSSFFWSSDSQKKKYRLTKWDYIYRLKDQGGLGVLNLDIMNRCLLSKWLFKLLNG-EG 179
Query: 225 LWKEVLIEKY--GTRVCNLLVEDDGSWPSYISRWWKDVAFLEDEGGERWFNAEVVRKVGC 282
LW+ +L KY G + ++ S S++W + ++D+ F K G
Sbjct: 180 LWQNLLRNKYLKGKPLSHM------SHKPGTSQFWAGLMKVKDQ-----FFQYGSFKPGN 228
Query: 283 GNSTSFWKDPWRGDIPFSRKYPRLF-AISNNKETLVE-------ECRQMNGVGGGWIFEW 334
G FW+D W G P +YP L+ + TLVE + G + EW
Sbjct: 229 GMEIRFWEDTWLGLQPLKYQYPSLYNVVRKRHSTLVEVMSTTPLNVSFRRSIVGPKLVEW 288
Query: 335 HRPLFVWEEELLISLKEDLEGHRWVNDPDRWVKSCYGKLERLLGGEVEWSLEELRVLESI 394
+ L + +S ++D + VKS Y ++ V + R+L
Sbjct: 289 N-DLISRLANITLSNEKDCFIWSLYKNGHFSVKSMY---NAIINSNV---IIHKRIL--- 338
Query: 395 WNSKAPLKVIAFSWKLDESLL 415
W K PLK+ F W L + ++
Sbjct: 339 WKVKVPLKIKVFMWFLHKKVI 359
>emb|CAE04648.2| OSJNBa0061G20.4 [Oryza sativa (japonica cultivar-group)]
gi|50923465|ref|XP_472093.1| OSJNBa0061G20.4 [Oryza
sativa (japonica cultivar-group)]
Length = 632
Score = 153 bits (387), Expect = 8e-36
Identities = 114/398 (28%), Positives = 177/398 (43%), Gaps = 38/398 (9%)
Query: 25 LQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMACDFL 84
+QYADDTL +AS L+TLKALL+ F++ + LKVNF KSCL+ INV
Sbjct: 145 VQYADDTLPYLKASGKELFTLKALLQTFQLGTSLKVNFNKSCLIPINVDEGKAQNLAAVF 204
Query: 85 NCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNAVINS 144
C G +PF YLGLP+G K++ + PL+++ R+L S ++S G R+ L+N+V +S
Sbjct: 205 GCQLGSLPFTYLGLPLGTIKPKVIDFAPLVDRTERRLTS-NAYFLSYGVRLTLVNSVFSS 263
Query: 145 IPIFYLSFLKMPNKVWRKIVKIQCDFLWGGAR-GGKKLCWVKWRVVCQPRSKGGLGVRDI 203
+P +Y+ L +P V I + + LW G+ K W VC+P+ KGGLGV ++
Sbjct: 264 LPTYYMCTLMLPKTVIDSIDRARRHCLWRGSEVNSNKKSLAAWHKVCKPKRKGGLGVLNL 323
Query: 204 RVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDGSWPSYISRWWKDVAFL 263
+ N +LL K+ + + + W ++ Y L G++ WW+D+ L
Sbjct: 324 SIQNQALLIKFLDKFSKKNDLPWVNLVWSSYYGNYVPHLTNLKGTF------WWRDICKL 377
Query: 264 EDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKETLVEECRQM 323
D F + GN+ S W W P RL + + N+ V + +
Sbjct: 378 MDV-----FRGIARCHLKSGNTCSIWYYVWADQPPLFHTMSRLCSFAQNQNASVSDFLSI 432
Query: 324 NGVGGGWIFEWHRPLFVWEEELLISLKEDLEGHRWVNDPDRWVKSCYGKLERLLGGEVEW 383
+ PL V + L L VN+ D W + G +++
Sbjct: 433 EAEENCTL-----PLSVQAFQEFQELTSSLVDIELVNENDAW---------SYIWGNMKY 478
Query: 384 SLEELRVLES-----------IWNSKAPLKVIAFSWKL 410
S ++ L +W A V F W L
Sbjct: 479 SSQKFYALNFRAIKPPVHFLWLWKCNAVSNVKVFGWLL 516
>gb|AAM08777.1| Putative retroelement [Oryza sativa]
Length = 779
Score = 153 bits (387), Expect = 8e-36
Identities = 73/194 (37%), Positives = 119/194 (60%)
Query: 21 GISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMA 80
G+SHLQYA+DT+ +A+ +N+ LK LL FE SG+K+N+ KS + + VP E +
Sbjct: 72 GLSHLQYANDTILFAKATKENVLALKFLLFCFEEMSGMKINYQKSEVYVLGVPKEEEELY 131
Query: 81 CDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNA 140
D LNC G +PF YLGLP+G P+++++ ++L SW + ++S GGR + +N
Sbjct: 132 VDMLNCKVGSLPFTYLGLPMGVGKVGKRDLLPIMQKIEKRLQSWHSGHLSYGGREIRINT 191
Query: 141 VINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGV 200
++S+P++ + F K+P + + + I+ F W G KK +K + +C+P+ GGLG
Sbjct: 192 FLSSVPMYAMGFFKLPEEFHKNLETIRGRFYWQGNGKKKKYHLIKLQGLCRPKDFGGLGF 251
Query: 201 RDIRVVNLSLLAKW 214
D R++N LL+KW
Sbjct: 252 LDTRIMNFCLLSKW 265
>ref|XP_468883.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|29126371|gb|AAO66563.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)]
Length = 746
Score = 152 bits (385), Expect = 1e-35
Identities = 93/294 (31%), Positives = 155/294 (52%), Gaps = 17/294 (5%)
Query: 25 LQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMACDFL 84
+QYADDTL I +A ++ LK +L+ + ++GLK+N+ KSC++ INV E +
Sbjct: 434 IQYADDTLIIMKACQKEIFNLKGILQSYSESTGLKINYQKSCMIHINVLEEDKDILSKTF 493
Query: 85 NCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNAVINS 144
C G +PF YLGLPVG K++ + PL++++ R+L + +++ G R+ L+N V++S
Sbjct: 494 GCQSGNLPFTYLGLPVGTTKPKIIDFAPLIDRVERRLPA-VTMFLNHGQRLTLVNFVLSS 552
Query: 145 IPIFYLSFLKMPNKVWRKIVKIQCDFLWGGA--RGGKKLCWVKWRVVCQPRSKGGLGVRD 202
+P +Y+ LK+P KV I + + LW + W +VC+P+SKGGLG+ +
Sbjct: 553 LPTYYMCSLKIPKKVIDHIDRARRHCLWRKSPNLSANSHSLAAWDLVCRPKSKGGLGIIN 612
Query: 203 IRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKY--GTRVCNLLVEDDGSWPSYISRWWKDV 260
+ + N++LL K + ++ W ++ KY + + GS+ WWKD+
Sbjct: 613 LELQNIALLMKHLDKFYNRKDVPWVNLIWNKYYASKDTPPHALRETGSF------WWKDI 666
Query: 261 AFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNKE 314
L F A G+S FWKD W DI LF+ ++N++
Sbjct: 667 LRL-----NTIFRAISNITPNQGDSFLFWKDLWSNDI-LQESMTNLFSFASNED 714
>ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-group)]
Length = 892
Score = 152 bits (385), Expect = 1e-35
Identities = 115/427 (26%), Positives = 195/427 (44%), Gaps = 40/427 (9%)
Query: 1 MRNAVSRNLFKGFKIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKV 60
+ + V++ KI GISHL +ADDTL +A +K ++ + +A+G +
Sbjct: 166 LEDKVAQGALSPVKICRQAPGISHLLFADDTLLFFKADNVQAQAVKEVITDYALATGQLI 225
Query: 61 NFYKSCLM-GINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSR 119
N K +M G + P + + L + +YLG P ++ L E++ +
Sbjct: 226 NPAKCSIMFGESSPPQTRDVIRVTLQIANSGFEDRYLGFPTPEGRMCKGKFQSLQERIWK 285
Query: 120 KLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGK 179
+L WG +S GG+ VL+ +VI +IP++ + +P V ++ K+ +F WG +G +
Sbjct: 286 RLIIWGENLLSSGGKEVLIKSVIQTIPVYVMGIFNLPESVCEELTKLTRNFWWGVEKGKR 345
Query: 180 KLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKY---GT 236
K W W + +P+S GGLG RD R+ N +LLA+ WR++ + L VL KY G+
Sbjct: 346 KTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPNGS 405
Query: 237 RVCNLLVEDDGSWPSYISRWWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGD 296
V D S+ S WK + E G ++ ++G G S W+DPW
Sbjct: 406 LV-------DTSFGGNASPVWKAI-----EYGLSLLKEGIIWRIGNGKSVRIWRDPW--- 450
Query: 297 IP--FSRKYPRLFAISNNKETLVEECRQMNGVGGGWIFEWHRPLFVWEE-----ELLISL 349
+P FSR+ I+ ++ ++ G W +F+ + + +S
Sbjct: 451 LPRDFSRR-----PITRKGNCRLKWVSELLSENGAWDETRVNQVFLPVDAEAICSIRVSS 505
Query: 350 KEDLEGHRWVNDPDRW----VKSCYGKLERLLGGEVEWSLEEL---RVLESIWNSKAPLK 402
+++ + W PD+ V+S YG L+ E S R+ IW + AP K
Sbjct: 506 RQEDDFVAW--HPDKHGKFSVRSAYGLACNLVNMETSSSSSSARCKRMWNLIWQTNAPQK 563
Query: 403 VIAFSWK 409
V F+W+
Sbjct: 564 VRIFAWR 570
>gb|AAP54692.1| putative reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|37536206|ref|NP_922405.1| putative
reverse transcriptase [Oryza sativa (japonica
cultivar-group)] gi|27311287|gb|AAO00713.1|
retrotransposon protein, putative, unclassified [Oryza
sativa (japonica cultivar-group)]
Length = 1557
Score = 152 bits (383), Expect = 2e-35
Identities = 112/431 (25%), Positives = 195/431 (44%), Gaps = 36/431 (8%)
Query: 1 MRNAVSRNLFKGFKIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKV 60
+ V + ++ + GISHL +ADDTL +A + +K + + ++G +
Sbjct: 1024 LEEKVEQGAISPIRVCHQAPGISHLLFADDTLLFFKADLSQSQAIKEVFGSYATSTGQLI 1083
Query: 61 NFYK-SCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSR 119
N K S L G ++P + L + KYLGLP ++ L E++ +
Sbjct: 1084 NPTKCSILFGNSLPIASRDAITNCLQIASTEFEDKYLGLPTPGGRMHKGRFQSLRERIWK 1143
Query: 120 KLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGK 179
K+ WG Y+S GG+ VL+ AVI +IP++ + K+P V + + +F WG +G +
Sbjct: 1144 KILQWGENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRNFWWGAEKGKR 1203
Query: 180 KLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKY---GT 236
K W W+ + + +S GGLG +DIR+ N +LLA+ WR++ + L VL KY G+
Sbjct: 1204 KTHWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCARVLKAKYYPNGS 1263
Query: 237 RVCNLLVEDDGSWPSYISRWWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGD 296
V D S+ S W+ + E G ++ ++G G S W+DPW
Sbjct: 1264 IV-------DTSFGGNASPGWQAI-----EHGLELVKKGIIWRIGNGRSVRVWQDPW--- 1308
Query: 297 IPFSRKYPRLFAISNNKETLVEECRQMNGVGGGWIFEWHRPLFV-WEEELLISL----KE 351
+P + +N + V + NG+ W +F+ + E+++ L ++
Sbjct: 1309 LPRDLSRRPITPKNNCRIKWVADLMLDNGM---WDANKINQIFLPVDVEIILKLRTSSRD 1365
Query: 352 DLEGHRWVNDPDRW----VKSCYGKLERLLGGEVEWSLEELRV---LESIWNSKAPLKVI 404
+ + W PD+ V++ Y E E S ++ + E +W P KV
Sbjct: 1366 EEDFIAW--HPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVK 1423
Query: 405 AFSWKLDESLL 415
F+W+ + L
Sbjct: 1424 IFTWRATSNCL 1434
>emb|CAI44611.1| P0650D04.15 [Oryza sativa (japonica cultivar-group)]
Length = 1579
Score = 151 bits (382), Expect = 3e-35
Identities = 105/359 (29%), Positives = 168/359 (46%), Gaps = 26/359 (7%)
Query: 3 NAVSRNLFKGFKIKNDGTGISHLQ---YADDTLCIGEASVDNLWTLKALLRGFEMASGLK 59
N + F+ F+ G +S L YADDT+ + + T K +L FE +GLK
Sbjct: 1026 NGERTDFFRTFRGLRQGDPLSPLLFNLYADDTVLFIANDMHQIVTTKFILYCFEEMAGLK 1085
Query: 60 VNFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSR 119
+NF+KS + I + LNC G P KYLGLP+ + V ++ L ++L +
Sbjct: 1086 INFHKSEVFSIGMSELDTERVAQMLNCPVGHFPMKYLGLPISPDKILNVGFDFLGQKLEK 1145
Query: 120 KLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGK 179
+L WG+ +S GR V +NA ++SIP + + F +P + + KI+ + W +
Sbjct: 1146 RLTKWGSN-LSHAGRAVQINACLSSIPFYAMGFYHLPEGIHQSFDKIRGRYYWASNKLRG 1204
Query: 180 KLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTR-- 237
K VK + P+ GGLG + R +N++LLAKW +V ++ L E+L +KY T
Sbjct: 1205 KYHMVKLEDMAFPKDFGGLGFTETRKMNIALLAKWIMKVDSEDKSLCIELLRKKYLTNES 1264
Query: 238 --VCNLLVEDDGSWPSYISRWWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRG 295
C + +S++W+ + + W +G G S FWKD W G
Sbjct: 1265 FFSCKI---------GNVSQFWRGLLNIRG-----WMMLGAEWSIGNGLSVKFWKDTWFG 1310
Query: 296 DIPFSRKYPRLFAISNNKETLVEECRQMNGVGGGWIFEWHRPLFVWEEELLISLKEDLE 354
+ P +P ++ + N +E LV + G GG + R E E LKE ++
Sbjct: 1311 NCPLMTLFPAIYRVCNQQEILVSQV----GQGGPGCLSFRRSFGPEELEEWNDLKEIID 1365
>gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]
Length = 1998
Score = 151 bits (382), Expect = 3e-35
Identities = 98/293 (33%), Positives = 149/293 (50%), Gaps = 20/293 (6%)
Query: 25 LQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMACDFL 84
+QYADDTL I E L LK+++ F A+GLKVN KS ++ IN+ E +
Sbjct: 1490 IQYADDTLIIAEGDTRQLLILKSIINTFSEATGLKVNLQKSMMLPINMDEERLDTLARTF 1549
Query: 85 NCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNAVINS 144
CS+G PF YLGLP+G + ++PL+ + +L S ++S GR+ L NAV +
Sbjct: 1550 GCSKGSFPFTYLGLPLGITKPTIQDYQPLINKCEARLGSVAT-FLSEAGRLELTNAVFTA 1608
Query: 145 IPIFYLSFLKMPNKVWRKIVKIQCDFLW-GGARGGKKLCWVKWRVVCQPRSKGGLGVRDI 203
+P FY+ L +P V KI K + LW G +K W++VC+P+++GGLGV DI
Sbjct: 1609 LPTFYMCTLAIPKSVIHKIDKFRKHCLWRGNGINARKPPKAAWKLVCKPKNEGGLGVIDI 1668
Query: 204 RVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYGTRVCNLLVEDDGSWPSYI---SRWWKDV 260
N +LL K + ++ W +++ +K+ + G P I S WW+D+
Sbjct: 1669 EKQNEALLMKNLDKFFNKKDTPWVQMIWDKHYAK---------GKLPGQIRKGSFWWRDI 1719
Query: 261 AFLEDEGGERWFNAEVVRKVGCGNSTSFWKDPWRGDIPFSRKYPRLFAISNNK 313
L D E +++ G G S FW+D W G + P LF+ +K
Sbjct: 1720 LKLLDPYKE----MSLIQMKG-GESIVFWQDKW-GMQKLRLEMPELFSFVQHK 1766
>gb|AAV25285.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 720
Score = 150 bits (378), Expect = 9e-35
Identities = 104/373 (27%), Positives = 182/373 (47%), Gaps = 34/373 (9%)
Query: 1 MRNAVSRNLFKGF---KIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASG 57
+++ +++ KG I +D +QYADDTL I +A ++ LKALL + M +G
Sbjct: 359 LQSIINKTYSKGLLSTPIPSDNGLFPIIQYADDTLIIMKADQKEIFCLKALLNTYAMCTG 418
Query: 58 LKVNFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQL 117
LK+NF+KS ++ IN S M + G +PF YLGLP+ K+ + PL++++
Sbjct: 419 LKINFHKSFMIPINTDSTKMEVLA-------GTLPFTYLGLPLVTTKPKVSDFAPLIDRV 471
Query: 118 SRKLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLW--GGA 175
R+L S +++ G R+ ++N+V++S+P +Y+ LK+P KV I + + LW
Sbjct: 472 ERRLPS-TTIFLNYGQRLTMVNSVLSSLPTYYMCTLKLPKKVILHIDRARRHCLWRKNNE 530
Query: 176 RGGKKLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYG 235
+ W +VC+P+ KGGLG+ ++ + N +LL K + + W +++ KY
Sbjct: 531 LETRTHSLAAWDIVCKPKKKGGLGIINLEIQNTALLMKHLHKFFNNRDLPWVQLIWNKY- 589
Query: 236 TRVCNLLVEDDGSWPSYISR---WWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDP 292
+ D ++ + WWKD+ L F A VG G+S FWKD
Sbjct: 590 ------YINSDKPPHAHKEKGSFWWKDIFRLIP-----MFRALSSVTVGSGDSVLFWKDN 638
Query: 293 WRGDIPFSRKYPRLFAISNNKETLVEECRQMNGVGGGWIFEWHRPLFVWEEELLISLKED 352
W + ++P LF+ ++T + N + +H PL + +L
Sbjct: 639 WNNQL-LENEFPVLFSYGKEEDTSLH-----NFMESELQHNFHLPLSNQAMQEWDALHSR 692
Query: 353 LEGHRWVNDPDRW 365
L+ + ++ D+W
Sbjct: 693 LQNLHFSSEADKW 705
>gb|AAW56921.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 552
Score = 150 bits (378), Expect = 9e-35
Identities = 104/373 (27%), Positives = 182/373 (47%), Gaps = 34/373 (9%)
Query: 1 MRNAVSRNLFKGF---KIKNDGTGISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASG 57
+++ +++ KG I +D +QYADDTL I +A ++ LKALL + M +G
Sbjct: 191 LQSIINKTYSKGLLSTPIPSDNGLFPIIQYADDTLIIMKADQKEIFCLKALLNTYAMCTG 250
Query: 58 LKVNFYKSCLMGINVPSEFMTMACDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQL 117
LK+NF+KS ++ IN S M + G +PF YLGLP+ K+ + PL++++
Sbjct: 251 LKINFHKSFMIPINTDSTKMEVLA-------GTLPFTYLGLPLVTTKPKVSDFAPLIDRV 303
Query: 118 SRKLHSWGNKYVSLGGRIVLLNAVINSIPIFYLSFLKMPNKVWRKIVKIQCDFLW--GGA 175
R+L S +++ G R+ ++N+V++S+P +Y+ LK+P KV I + + LW
Sbjct: 304 ERRLPS-TTIFLNYGQRLTMVNSVLSSLPTYYMCTLKLPKKVILHIDRARRHCLWRKNNE 362
Query: 176 RGGKKLCWVKWRVVCQPRSKGGLGVRDIRVVNLSLLAKWRWRVLQGEEGLWKEVLIEKYG 235
+ W +VC+P+ KGGLG+ ++ + N +LL K + + W +++ KY
Sbjct: 363 LETRTHSLAAWDIVCKPKKKGGLGIINLEIQNTALLMKHLHKFFNNRDLPWVQLIWNKY- 421
Query: 236 TRVCNLLVEDDGSWPSYISR---WWKDVAFLEDEGGERWFNAEVVRKVGCGNSTSFWKDP 292
+ D ++ + WWKD+ L F A VG G+S FWKD
Sbjct: 422 ------YINSDKPPHAHKEKGSFWWKDIFRLIP-----MFRALSSVTVGSGDSVLFWKDN 470
Query: 293 WRGDIPFSRKYPRLFAISNNKETLVEECRQMNGVGGGWIFEWHRPLFVWEEELLISLKED 352
W + ++P LF+ ++T + N + +H PL + +L
Sbjct: 471 WNNQL-LENEFPVLFSYGKEEDTSLH-----NFMESELQHNFHLPLSNQAMQEWDALHSR 524
Query: 353 LEGHRWVNDPDRW 365
L+ + ++ D+W
Sbjct: 525 LQNLHFSSEADKW 537
>emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa (japonica cultivar-group)]
gi|50930119|ref|XP_474587.1| OSJNBa0019G23.12 [Oryza
sativa (japonica cultivar-group)]
Length = 1140
Score = 149 bits (376), Expect = 2e-34
Identities = 70/201 (34%), Positives = 117/201 (57%), Gaps = 4/201 (1%)
Query: 21 GISHLQYADDTLCIGEASVDNLWTLKALLRGFEMASGLKVNFYKSCLMGINVPSEFMTMA 80
G+S LQY DD + ++ +K++L FE SGLK+NF+KS L E+
Sbjct: 908 GLSILQYVDDIVLFMNHDLEKAQNMKSVLLAFEQLSGLKINFHKSELYCFGEALEYRDQY 967
Query: 81 CDFLNCSEGVVPFKYLGLPVGANSFKLVTWEPLLEQLSRKLHSWGNKYVSLGGRIVLLNA 140
C G PF+YLG+P+ + W+ ++E+ +KL SW K +SLGGR+ L+N+
Sbjct: 968 AQLFGCQVGNFPFRYLGIPIHCRKLRNAEWKEVVERFEKKLSSWKGKLLSLGGRLTLINS 1027
Query: 141 VINSIPIFYLSFLKMPNKVWRKIVKIQCDFLWGGARGGKKLCWVKWRVVCQPRSKGGLGV 200
V++S+P++ +SFL +P+ V +K+ ++ F W G KK KW ++C+P+ +G LG+
Sbjct: 1028 VLSSLPMYMMSFLAIPSGVLKKLDYLRSRFYWQGDGHKKKYQLAKWDIICRPKDQGRLGI 1087
Query: 201 RDIRVVNLSLLAKW--RWRVL 219
D+ V+ +L+ +W W +L
Sbjct: 1088 HDLEVI--TLVTRWLRTWAIL 1106
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.323 0.141 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 820,075,420
Number of Sequences: 2540612
Number of extensions: 37104353
Number of successful extensions: 65590
Number of sequences better than 10.0: 375
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 64736
Number of HSP's gapped (non-prelim): 588
length of query: 420
length of database: 863,360,394
effective HSP length: 131
effective length of query: 289
effective length of database: 530,540,222
effective search space: 153326124158
effective search space used: 153326124158
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC122162.14