BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121245.5 + phase: 0
(72 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_450985.1| putative ABC transporter [Oryza sativa (japonic... 80 2e-14
ref|XP_450138.1| ABC transporter-like protein [Oryza sativa (jap... 79 4e-14
ref|XP_450986.1| putative ABC transporter [Oryza sativa (japonic... 77 2e-13
emb|CAD41191.1| OSJNBa0074L08.3 [Oryza sativa (japonica cultivar... 67 9e-11
ref|XP_477523.1| ABC transporter family protein-like [Oryza sati... 66 2e-10
ref|XP_477522.1| putative ABC transporter family protein [Oryza ... 66 2e-10
gb|AAP80385.1| ABC transporter [Gossypium hirsutum] 66 3e-10
gb|AAV59325.1| putative ATP-dependent transmembrane transporter ... 66 3e-10
gb|AAP54419.1| putative ABC transporter [Oryza sativa (japonica ... 65 5e-10
gb|AAN12898.1| putative ABC transporter protein [Arabidopsis tha... 65 5e-10
pir||E86313 hypothetical protein F2H15.7 - Arabidopsis thaliana ... 65 5e-10
gb|AAN15724.1| unknown protein [Arabidopsis thaliana] gi|2026031... 64 1e-09
dbj|BAB01452.1| ABC transporter-like protein [Arabidopsis thaliana] 64 1e-09
ref|NP_188746.2| ABC transporter family protein [Arabidopsis tha... 64 1e-09
gb|AAM45334.2| similar to Dictyostelium discoideum (Slime mold).... 64 1e-09
gb|AAK69777.1| ABC transporter mdrA2 [Dictyostelium discoideum] 64 1e-09
gb|AAP37786.1| At1g51560 [Arabidopsis thaliana] gi|52354014|gb|A... 63 2e-09
gb|AAM45335.2| similar to Dictyostelium discoideum (Slime mold).... 63 2e-09
dbj|BAC43047.1| putative ATP-dependent transmembrane transporter... 60 1e-08
ref|NP_175557.1| ABC transporter family protein [Arabidopsis tha... 59 3e-08
>ref|XP_450985.1| putative ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|47848378|dbj|BAD22237.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 721
Score = 79.7 bits (195), Expect = 2e-14
Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 11 GTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+WV+ + GK+G IL GL GYA+PG++LAIMGPSGCGKSTLLD LAG
Sbjct: 97 GVVLAWEDLWVSA-AGGKSGRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDALAG 152
>ref|XP_450138.1| ABC transporter-like protein [Oryza sativa (japonica
cultivar-group)] gi|47848592|dbj|BAD22442.1| ABC
transporter-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 525
Score = 78.6 bits (192), Expect = 4e-14
Identities = 36/64 (56%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Query: 5 KEDEVDG-TCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLD 63
+E+ +DG LTW+D+WV + +G + +IL G++G A+PG++LAIMGPSGCGK+TLLD
Sbjct: 83 REERLDGGVFLTWEDVWVTAVDSGGKAA-TILNGVSGSARPGEVLAIMGPSGCGKTTLLD 141
Query: 64 TLAG 67
TLAG
Sbjct: 142 TLAG 145
>ref|XP_450986.1| putative ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|47848379|dbj|BAD22238.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 728
Score = 76.6 bits (187), Expect = 2e-13
Identities = 36/57 (63%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 11 GTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+WV+T + G IL GL GYA+PG++LAIMGPSGCGKSTLLD+LAG
Sbjct: 102 GAVLAWEDLWVST-AGGSRRRVPILCGLNGYARPGEVLAIMGPSGCGKSTLLDSLAG 157
>emb|CAD41191.1| OSJNBa0074L08.3 [Oryza sativa (japonica cultivar-group)]
gi|50926616|ref|XP_473255.1| OSJNBa0074L08.3 [Oryza
sativa (japonica cultivar-group)]
Length = 692
Score = 67.4 bits (163), Expect = 9e-11
Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
LTWKD+ V T++ G ++++L LTGYA+PG L A+MGPSG GKSTLLD LAG
Sbjct: 48 LTWKDLSV-TVALGPGKTQTVLDELTGYAEPGSLTALMGPSGSGKSTLLDALAG 100
>ref|XP_477523.1| ABC transporter family protein-like [Oryza sativa (japonica
cultivar-group)] gi|33147054|dbj|BAC79957.1| ABC
transporter family protein-like [Oryza sativa (japonica
cultivar-group)] gi|34395341|dbj|BAC84400.1| ABC
transporter family protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 362
Score = 66.2 bits (160), Expect = 2e-10
Identities = 34/62 (54%), Positives = 45/62 (71%), Gaps = 5/62 (8%)
Query: 11 GTCLTWKDIWVNTISN----GKNGSKS-ILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTL 65
G LTW D+ V + G +G ++ IL GL+GYA+PG++LA+MGPSGCGK+TLLD L
Sbjct: 117 GVFLTWDDLSVTAPAAAAGCGGHGRRAVILDGLSGYARPGEVLALMGPSGCGKTTLLDAL 176
Query: 66 AG 67
AG
Sbjct: 177 AG 178
>ref|XP_477522.1| putative ABC transporter family protein [Oryza sativa (japonica
cultivar-group)] gi|33147053|dbj|BAC79956.1| putative
ABC transporter family protein [Oryza sativa (japonica
cultivar-group)] gi|34395340|dbj|BAC84399.1| putative
ABC transporter family protein [Oryza sativa (japonica
cultivar-group)]
Length = 729
Score = 66.2 bits (160), Expect = 2e-10
Identities = 34/62 (54%), Positives = 45/62 (71%), Gaps = 5/62 (8%)
Query: 11 GTCLTWKDIWVNTISN----GKNGSKS-ILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTL 65
G LTW D+ V + G +G ++ IL GL+GYA+PG++LA+MGPSGCGK+TLLD L
Sbjct: 117 GVFLTWDDLSVTAPAAAAGCGGHGRRAVILDGLSGYARPGEVLALMGPSGCGKTTLLDAL 176
Query: 66 AG 67
AG
Sbjct: 177 AG 178
>gb|AAP80385.1| ABC transporter [Gossypium hirsutum]
Length = 705
Score = 65.9 bits (159), Expect = 3e-10
Identities = 39/69 (56%), Positives = 50/69 (71%), Gaps = 7/69 (10%)
Query: 3 REKED-EVDGTC---LTWKDIWVN-TISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCG 57
REK D E+ G LTW+D+ V T+SNG ++ +L+GLTGYA+PG L A+MGPSG G
Sbjct: 37 REKTDTELMGDVSARLTWEDLTVMVTLSNG--ATQKVLEGLTGYAEPGTLTALMGPSGSG 94
Query: 58 KSTLLDTLA 66
KSTLLD L+
Sbjct: 95 KSTLLDALS 103
>gb|AAV59325.1| putative ATP-dependent transmembrane transporter [Oryza sativa
(japonica cultivar-group)] gi|50933341|ref|XP_476198.1|
putative ATP-dependent transmembrane transporter [Oryza
sativa (japonica cultivar-group)]
gi|46981314|gb|AAT07632.1| putative ATP-dependent
transmembrane transporter [Oryza sativa (japonica
cultivar-group)] gi|46981246|gb|AAT07564.1| putative
ATP-dependent transmembrane transporter [Oryza sativa
(japonica cultivar-group)]
Length = 700
Score = 65.9 bits (159), Expect = 3e-10
Identities = 31/60 (51%), Positives = 41/60 (67%)
Query: 8 EVDGTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
E G LTW+++ G +K ++QGL GYA PG+++AIMGPSG GKSTLLD L+G
Sbjct: 32 ESGGASLTWENLTAVLPGGGGRATKKLVQGLYGYAVPGRVVAIMGPSGSGKSTLLDALSG 91
>gb|AAP54419.1| putative ABC transporter [Oryza sativa (japonica cultivar-group)]
gi|37535660|ref|NP_922132.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
gi|22128707|gb|AAM92819.1| putative ABC transporter
[Oryza sativa (japonica cultivar-group)]
Length = 723
Score = 65.1 bits (157), Expect = 5e-10
Identities = 31/60 (51%), Positives = 41/60 (67%), Gaps = 6/60 (10%)
Query: 14 LTWKDIWVNTISNGKNG------SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
L W+D+ V + G G ++ +LQGLTG+A+PG + A+MGPSG GKSTLLD LAG
Sbjct: 64 LAWRDLTVTVVLGGGGGGGGGGTTQDVLQGLTGHAEPGTITALMGPSGSGKSTLLDALAG 123
>gb|AAN12898.1| putative ABC transporter protein [Arabidopsis thaliana]
gi|19423992|gb|AAL87274.1| putative ABC transporter
protein [Arabidopsis thaliana]
gi|22329638|ref|NP_173226.2| ABC transporter family
protein [Arabidopsis thaliana]
Length = 703
Score = 65.1 bits (157), Expect = 5e-10
Identities = 30/53 (56%), Positives = 42/53 (78%), Gaps = 1/53 (1%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
LTW+D+ V ++ G ++++L+GLTGYA+PG L A+MGPSG GKST+LD LA
Sbjct: 50 LTWQDLTV-MVTMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALA 101
>pir||E86313 hypothetical protein F2H15.7 - Arabidopsis thaliana
gi|9665062|gb|AAF97264.1| Contains similarity to ATP
dependent transmembrane transporter protein (wh3) from
Bombyx mori gb|AF229609 and contains an ABC transporter
PF|00005 domain. ESTs gb|Z18062, gb|AI999375,
gb|N96732, gb|F14058, gb|AV528782, gb|AV559526,
gb|AV556190, gb|AV562800, gb|AV559560, gb|AV523165,
gb|AV565094, gb|AV566285 come from this gene.
[Arabidopsis thaliana]
Length = 659
Score = 65.1 bits (157), Expect = 5e-10
Identities = 30/53 (56%), Positives = 42/53 (78%), Gaps = 1/53 (1%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
LTW+D+ V ++ G ++++L+GLTGYA+PG L A+MGPSG GKST+LD LA
Sbjct: 50 LTWQDLTV-MVTMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALA 101
>gb|AAN15724.1| unknown protein [Arabidopsis thaliana] gi|20260310|gb|AAM13053.1|
unknown protein [Arabidopsis thaliana]
Length = 691
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/58 (56%), Positives = 44/58 (74%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N +G ++ +LQ L GYA+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 22 GAYLAWEDLTV-VIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAG 78
>dbj|BAB01452.1| ABC transporter-like protein [Arabidopsis thaliana]
Length = 594
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/58 (56%), Positives = 44/58 (74%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N +G ++ +LQ L GYA+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 22 GAYLAWEDLTV-VIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAG 78
>ref|NP_188746.2| ABC transporter family protein [Arabidopsis thaliana]
Length = 691
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/58 (56%), Positives = 44/58 (74%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N +G ++ +LQ L GYA+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 22 GAYLAWEDLTV-VIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAG 78
>gb|AAM45334.2| similar to Dictyostelium discoideum (Slime mold). ABC transporter
mdrA2 gi|19550691|gb|AAL91487.1| ABC transporter AbcG18
[Dictyostelium discoideum] gi|66819687|ref|XP_643502.1|
ABC transporter G family protein [Dictyostelium
discoideum] gi|60471638|gb|EAL69594.1| ABC transporter G
family protein [Dictyostelium discoideum]
Length = 1476
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 5 KEDEVDGTCLTWKDIW--VNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLL 62
++D G + WKD+ V+ +GKN +L G+ GY KPG L+A+MGPSG GKSTLL
Sbjct: 799 RKDIPIGCYMQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLL 858
Query: 63 DTLA 66
D LA
Sbjct: 859 DVLA 862
Score = 45.1 bits (105), Expect = 5e-04
Identities = 20/45 (44%), Positives = 32/45 (70%), Gaps = 1/45 (2%)
Query: 22 NTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
+T+ +GKN K IL L + KPG ++ ++G GCGK++L++TLA
Sbjct: 76 STVGHGKN-EKKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA 119
>gb|AAK69777.1| ABC transporter mdrA2 [Dictyostelium discoideum]
Length = 1476
Score = 63.5 bits (153), Expect = 1e-09
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 5 KEDEVDGTCLTWKDIW--VNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLL 62
++D G + WKD+ V+ +GKN +L G+ GY KPG L+A+MGPSG GKSTLL
Sbjct: 799 RKDIPIGCYMQWKDLVYEVDVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLL 858
Query: 63 DTLA 66
D LA
Sbjct: 859 DVLA 862
Score = 45.1 bits (105), Expect = 5e-04
Identities = 20/45 (44%), Positives = 32/45 (70%), Gaps = 1/45 (2%)
Query: 22 NTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
+T+ +GKN K IL L + KPG ++ ++G GCGK++L++TLA
Sbjct: 76 STVGHGKN-EKKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA 119
>gb|AAP37786.1| At1g51560 [Arabidopsis thaliana] gi|52354014|gb|AAU44368.1| ABC
transporter CER5 [Arabidopsis thaliana]
gi|20260526|gb|AAM13161.1| ATP-dependent transmembrane
transporter, putative [Arabidopsis thaliana]
gi|15217942|ref|NP_175561.1| ABC transporter family
protein [Arabidopsis thaliana]
gi|15724278|gb|AAL06532.1| At1g51500/F5D21_6
[Arabidopsis thaliana] gi|12325360|gb|AAG52619.1|
ATP-dependent transmembrane transporter, putative;
39775-42780 [Arabidopsis thaliana]
gi|25297510|pir||D96553 hypothetical protein F5D21.6
[imported] - Arabidopsis thaliana
Length = 687
Score = 62.8 bits (151), Expect = 2e-09
Identities = 32/58 (55%), Positives = 43/58 (73%), Gaps = 2/58 (3%)
Query: 11 GTCLTWKDIWVNTISNGKNG-SKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
G L W+D+ V I N G ++ +L GL G+A+PG+++AIMGPSG GKSTLLD+LAG
Sbjct: 21 GAYLAWEDLTV-VIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAG 77
>gb|AAM45335.2| similar to Dictyostelium discoideum (Slime mold). ABC transporter
mdrA2 gi|19550690|gb|AAL91486.1| ABC transporter AbcG2
[Dictyostelium discoideum] gi|14583265|gb|AAF72517.2|
ABC transporter mdrA1 [Dictyostelium discoideum]
gi|66819689|ref|XP_643503.1| ABC transporter G family
protein [Dictyostelium discoideum]
gi|60471639|gb|EAL69595.1| ABC transporter G family
protein [Dictyostelium discoideum]
Length = 1328
Score = 62.8 bits (151), Expect = 2e-09
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 1 MKREKEDEVDGTCLTWKDIW--VNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGK 58
+K +KE + G + WKD+ V+ +GKN +L + GY KPG LLA+MGPSG GK
Sbjct: 703 VKAQKEIPI-GCYMQWKDLVYEVDVKKDGKNQRLRLLNEINGYVKPGMLLALMGPSGAGK 761
Query: 59 STLLDTLA 66
STLLD LA
Sbjct: 762 STLLDVLA 769
Score = 39.7 bits (91), Expect = 0.020
Identities = 18/59 (30%), Positives = 35/59 (58%)
Query: 8 EVDGTCLTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLA 66
E G +T +++ ++ + K ++IL L + KPG ++ I+G GCGK++++ LA
Sbjct: 47 EKKGMYVTARNLSMSIGTEKKGDKRNILSDLNFFLKPGSMVLILGSPGCGKTSVMKALA 105
>dbj|BAC43047.1| putative ATP-dependent transmembrane transporter [Arabidopsis
thaliana]
Length = 678
Score = 60.5 bits (145), Expect = 1e-08
Identities = 28/54 (51%), Positives = 38/54 (69%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
+ WKD+ V + G+ +K +L G+ G +P ++LAIMGPSG GKSTLLD LAG
Sbjct: 10 VAWKDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAG 63
>ref|NP_175557.1| ABC transporter family protein [Arabidopsis thaliana]
gi|12325372|gb|AAG52631.1| ATP-dependent transmembrane
transporter, putative; 59412-63615 [Arabidopsis
thaliana] gi|25297509|pir||H96552 hypothetical protein
F5D21.8 [imported] - Arabidopsis thaliana
Length = 678
Score = 58.9 bits (141), Expect = 3e-08
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 14 LTWKDIWVNTISNGKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAG 67
+ W+D+ V + G+ +K +L G+ G +P ++LAIMGPSG GKSTLLD LAG
Sbjct: 10 VAWEDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAG 63
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,753,296
Number of Sequences: 2540612
Number of extensions: 4582742
Number of successful extensions: 47302
Number of sequences better than 10.0: 11106
Number of HSP's better than 10.0 without gapping: 10721
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 34862
Number of HSP's gapped (non-prelim): 12826
length of query: 72
length of database: 863,360,394
effective HSP length: 48
effective length of query: 24
effective length of database: 741,411,018
effective search space: 17793864432
effective search space used: 17793864432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC121245.5