Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC121241.8 - phase: 0 
         (972 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_200107.1| expressed protein [Arabidopsis thaliana]             503  e-141
ref|NP_913402.1| unnamed protein product [Oryza sativa (japonica...   188  7e-46
dbj|BAD81296.1| unknown protein [Oryza sativa (japonica cultivar...   131  1e-28
ref|NP_913401.1| unnamed protein product [Oryza sativa (japonica...    51  2e-04
gb|AAF18882.1| NADH dehydrogenase subunit 2 [Liolaemus salinicola]     40  0.29
ref|XP_319986.2| ENSANGP00000005315 [Anopheles gambiae str. PEST...    40  0.49
gb|AAY21667.1| NADH dehydrogenase subunit 2 [Liolaemus melanops]       39  1.1
gb|AAF18861.1| NADH dehydrogenase subunit 2 [Liolaemus cuyanus]        39  1.1
gb|AAV67846.1| NADH dehydrogenase subunit 2 [Liolaemus cf. melan...    38  1.4
gb|AAY21670.1| NADH dehydrogenase subunit 2 [Liolaemus cf. melan...    38  1.4
gb|AAB48282.1| NADH dehydrogenase subunit II [Mabuya aurata] gi|...    38  1.9
ref|XP_532380.1| PREDICTED: similar to Sec3-like isoform 2 [Cani...    38  1.9
gb|AAV67850.1| NADH dehydrogenase subunit 2 [Liolaemus xanthovir...    38  1.9
gb|AAP84578.1| NADH dehydrogenase subunit 2 [Liolaemus canqueli]       38  1.9
gb|AAL72020.1| NADH dehydrogenase subunit 2 [Anolis transversalis]     38  1.9
gb|AAY21661.1| NADH dehydrogenase subunit 2 [Liolaemus cuyanus]        38  1.9
gb|AAH37446.1| Ikbke protein [Mus musculus]                            37  2.4
gb|AAQ09217.1| NADH dehydrogenase subunit 2 [Microlophus atacame...    37  2.4
gb|AAV67848.1| NADH dehydrogenase subunit 2 [Liolaemus canqueli]       37  2.4
gb|AAP84575.1| NADH dehydrogenase subunit 2 [Liolaemus xanthovir...    37  2.4

>ref|NP_200107.1| expressed protein [Arabidopsis thaliana]
          Length = 945

 Score =  503 bits (1296), Expect = e-141
 Identities = 358/994 (36%), Positives = 518/994 (52%), Gaps = 110/994 (11%)

Query: 11  YSHTNRIVLLIDLDPLLLLLHNTTTTTNYIKNILSTSKTLFSFPPLSTSLFAFKFFFSSL 70
           Y+ T R VLLIDL+PLL+       +  Y+  ++S ++ L  FPPLS SLF+FKFFFSSL
Sbjct: 7   YAKTQRFVLLIDLNPLLI----KPNSEQYLAVVISAAEKLLLFPPLSASLFSFKFFFSSL 62

Query: 71  PPHLSFSKLHPF-LPKHSFSFDHPFSTFNLLSKTLSTFPNFPL--------TYNPKAANL 121
              LS SKL    +     SFD P  T   L + +     + L          +P+  N+
Sbjct: 63  SSLLSSSKLSSLSISSSPLSFDLPNPTLVSLKRAIDAVKGYELRSSSTVATAASPRGVNV 122

Query: 122 IDSLTQLLHDYPWEPN-SDAD-------TDTTTPLVSPNLILLFTPFFNSFNSLAGFFD- 172
             +L Q+++DY WEP   D +       TD    +V  NL+++F+P     + ++ F D 
Sbjct: 123 AANLRQIVYDYAWEPVVRDPEIGMIPGFTDGGLDVVRSNLVVMFSPISRDLDWVSEFLDV 182

Query: 173 -SDEDSLRIENSFCDRFLGFFGNVSRRFRSKGVHCSWIGVNSDDKEDEVGMIRGLFEIGT 231
            S ++     + F  +    F  V+  F  + +  SWI V S D+  E+G+  G F+ G 
Sbjct: 183 KSGDECFSDLDLFKSKLREIFYCVNELFDDRDIQLSWIDVKSGDERCELGLKSGFFDSGI 242

Query: 232 GKLGWGFCSLDSILLGSALVPFGLIYPKIGVSWISVRCCSREVKVQLTLEILDVNGSPIE 291
            +LGWG CS DSI+ GS++VPFGLIYP IG+S       S++  +Q +LEI D+NG P+E
Sbjct: 243 RELGWGHCSTDSIVFGSSVVPFGLIYPAIGIS--PKLSTSQKFTLQASLEIADINGKPME 300

Query: 292 YNC-CDLEVLDFRVFGR---GEDVNLQGGG---RKERLWNVCSDGMAKLKVTVVRKCDAF 344
             C  +LE     +F      E +NL  G      + L     DG  KL +  +R CD  
Sbjct: 301 CKCGGELEFSSSEIFSGKRCDEFINLASGTEPVNHDSLVEQFCDGSTKLSIKALRMCDDL 360

Query: 345 VKFRSCLSDSVLVREVLGECMKG--DSGGFFADRVLELLATEFGCQGRRKSVPVWEMLLS 402
           ++      D+ +V +V  +  +   +   F+AD V ++L  E G +  ++S P+W++LLS
Sbjct: 361 IELERYTCDTFVVHQVSQDSDQDQEEESAFWADLVFQILGKETGERVAKRSSPIWQILLS 420

Query: 403 YLYKEDCWALVSVDSGKGGGSCVGILRPFTVSSALLSVLEDPQSASDFGAANMNSFIRTG 462
           YLY+E   ALVS  S   G    GIL+PFT SSAL+ V ++  S                
Sbjct: 421 YLYREGFSALVSF-SNSNGSLRTGILKPFTFSSALICVFDNGVSP--------------- 464

Query: 463 ILKSDRIFHKNRDLVDSQVKDVVGIKGEQKKKMTDLSALRNLTWSSFYDLVYDQFEMDLH 522
                    +  D  DS+ K    +   + K+    ++L +++W  F   V D  ++DL 
Sbjct: 465 ---------QTVDHEDSRKK----VSCSEYKRKPRKNSLNDISWEEFCRSVKDYGQIDLE 511

Query: 523 EVYYAMECNKSKKLKFLKCWMKQVKK------SSCHDLNLSEYPKPNQIFAEGTDSKLNE 576
           +VY+  + +KSKKLKFLKCWMKQ+ K      S   + N  E    N I  +   S   E
Sbjct: 512 DVYF-FKYSKSKKLKFLKCWMKQISKPRGCSLSVASNCNALEDVDANPIEEKNNSS---E 567

Query: 577 LPQNGEQPIPQVVMSAGINA-EVDTKKDDAVLDCGLETSEAFFRNLSNRIQQGIESDVID 635
                  P+P       ++   +  K++        E+SE FF +L ++I+QGIES+ ID
Sbjct: 568 ETDKASSPLPLAEEDIALSGNRISGKQESNTYVHASESSENFFVSLPSKIKQGIESEEID 627

Query: 636 LVALAERLVNSSIYWLCQKVDRETIPLIQVHSPLKDNNACGS----MVVSELVKQLLKDP 691
           L ALAERLV S +++  Q+ +++               +C S    +V+ EL K LLKDP
Sbjct: 628 LSALAERLVKSCVFYSSQRAEKD--------------YSCESGTLLLVIDELTKMLLKDP 673

Query: 692 KDIAAKHKSRDSSSQA----FDAAGPTIRYELQILFRLEILQSEVGRGIEDSSKQKFVKQ 747
           KD+ AK K +DSSS A     D AGPTIRYELQILFR+EIL+ + G G E+S  QKF KQ
Sbjct: 674 KDLVAKFKKKDSSSVASERNCDEAGPTIRYELQILFRMEILRCKKGLGNEESVTQKFAKQ 733

Query: 748 ICLLLENIQCHMEGGFFGDWNLENYVAKIIKSRYSHTLEDIVHKIYNKMDLLLFVNEDEA 807
           IC+ LE IQC ++GGFFG+W+L+ YV K IK+RY H L   V+ IY +MDLL+F +ED  
Sbjct: 734 ICMFLEGIQCKLDGGFFGEWSLDKYVDKTIKARYQHILGGAVNIIYTEMDLLMFTDED-L 792

Query: 808 PDCSFNSEDSSKSLDRKFYGD-EMGENDVGNGPFSAENKPFHLQKNVRGKLQRNIEGGHN 866
            D   N+EDSS+S     + + +   +   N      +K  + +++   K +   +G   
Sbjct: 793 EDSFMNNEDSSQSGRENIHSNFKNHHHSQSNEDVPGTSKQKNTEESREAKKEVEAQGMRE 852

Query: 867 KT-LIEALKIRMPAL-RVWAPKQ-KGMKSKKDHLSKIPKR-KDRTSACYDTVCETPMT-- 920
           +     +    MP L RVWAPKQ K  K K D   +  KR K++ S  YD VCETPMT  
Sbjct: 853 RARRFSSFTSWMPDLCRVWAPKQTKNSKGKADQQQRTAKRKKEQRSVEYDRVCETPMTTI 912

Query: 921 RNTRSMTRNT---VCETPMTRSTRSSPQSIGSDD 951
              R  T N     CET + RS  S P+++  DD
Sbjct: 913 ETKRIRTGNKDDYECET-LPRS--SVPKALFQDD 943


>ref|NP_913402.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
          Length = 684

 Score =  188 bits (478), Expect = 7e-46
 Identities = 196/732 (26%), Positives = 336/732 (45%), Gaps = 120/732 (16%)

Query: 16  RIVLLIDLDPLLLLLHNTTTT-----TNYIKNILSTSKTLFSFPPLSTSLFAFKFFFSSL 70
           R+VLL+D+DPLL     +  T     ++Y+  +L  + +L S  P + SL A + FFSSL
Sbjct: 9   RVVLLVDVDPLLPSPKASAPTAQPLASHYLAAVLPAATSLLSASP-AASLSAARLFFSSL 67

Query: 71  PPHLSFSKLHPFLPKHSFSFDHPFSTFNLLSKTLSTF--------PNFPLTYNPKAANLI 122
            P LSFS L   LP    +   P S F+L  +TL++         P       P ++++ 
Sbjct: 68  SPILSFSLLPGPLP----AAPAPLS-FHLHGETLASLAPLRRLALPACAHRRVPPSSSIA 122

Query: 123 DSLTQLLHDYPWEPNSDADTDTTTPLVSPNLILLFTPFFNSFNSLAGFFDSDEDSLRIEN 182
            S+ QL HDYPW+ + ++         +PNL++LFT     F    G  D+D        
Sbjct: 123 KSILQLEHDYPWDDDPESIRRRRVFQQTPNLVVLFTAAAE-FEEFGG--DAD-------- 171

Query: 183 SFCDRFLGFFGNVSRRFRSKGVHCSWIGVNSDDKEDEVGMIRGLFEIGTGKLGWGFCSLD 242
            F  RF G F  V  R  ++GV   W+ V    +    G+ R + E     LGW F + D
Sbjct: 172 -FGGRFRGVFRPVRDRLAARGVQVCWVAVGGCGE----GVRRAVTE-----LGWWFTAAD 221

Query: 243 SILLGSALVPFGLIYPKIGVSWISVRCCSREVKVQLTLEILDVNGSPIEYNCCDLEVLDF 302
           ++ LGSA+   GL++  +G+            + ++ LEI DV G P+    C++EV+  
Sbjct: 222 AVALGSAIATPGLVWGCLGLGGEEGGS-----RGEVVLEIADVEGKPLVCKGCEVEVIG- 275

Query: 303 RVFGRGEDVNLQGGGRKERLWNVCSDGMAKLKVTVVRKCDAFVKFRSCLSDSVLVREVLG 362
                               W +  D + K+ V  V +   + +  +   D+V+VR    
Sbjct: 276 -----------------STPWRLRGDSVFKMHVKAVCEVGNWEQLITGDGDAVMVRGCFQ 318

Query: 363 ECMKGDSGG-----FFADRVLEL-LATEFGCQGRRKSVPVWEMLLSYLYKEDCWALVSVD 416
           E  K D        FFA +++EL L  +    G  K  P+W+++L +L++++  A+VS+ 
Sbjct: 319 EAGKIDGEEAAEKEFFAHKIVELMLGDDKDKLGGGK--PIWQLILVFLHRKNYCAMVSIS 376

Query: 417 SGKGGGSCVGILRPFTVSSALLSVLEDPQSASDFGAANMNSFIRTGILKSDRIFHKNRDL 476
            G G     G++ P +++ ALL V ++    + FG                ++  K   L
Sbjct: 377 DGDGN-PLDGVIVPLSMNYALLHVAKN---GAGFG----------------QVVAKGPAL 416

Query: 477 VDSQVKDVVGIKGEQKKKMTDLSAL-RNLTWSSFYDLVYDQFE-----MDLHEVYYAMEC 530
           +DS + D    +  +KK+   +S L    TW SF D++    +     +DL ++Y++   
Sbjct: 417 LDSCMSDTSKEQSARKKRSKLVSKLFEATTWISFCDVLLKSADGSMPVVDLEDLYFSRYA 476

Query: 531 NKSKKLKFLKCWMKQVKK---SSCHDLNLSEYPKPNQIFAEGTDSKLNELPQNGEQPIPQ 587
             SKK++FLKCWMKQVK+   S+   +      + +    +  ++K   L ++   P+  
Sbjct: 477 ATSKKMRFLKCWMKQVKQQCLSTSSSIVAVAEEEKHLSSKDEAETKSPVLEEDASAPLVN 536

Query: 588 VVMSAGINAEVDTKKDDAVLDC-------GLETS--------EAFFRNLSNRIQQGIESD 632
             +   +  + D   D+  ++C       G ETS        EAF  ++  +I+Q + S+
Sbjct: 537 FSVDELVCDKEDKPMDE--INCNKVDKPVGDETSDFSSMEDLEAFLDSVPQKIEQSLCSE 594

Query: 633 VIDLVALAERLVNSSIYWLCQKVDRETIPLIQVHSPLKDNNACGSMVVSELVKQLLKDPK 692
             DL  LA RLV  S++ L  K  + +   ++  +  +  +     +  E    LL  PK
Sbjct: 595 DADLGNLAGRLVGLSVHALMIKHGKIS---VRYSNRGEVEDVSDGKIACEASGILLVKPK 651

Query: 693 DIAAKHKSRDSS 704
           ++ AK+K R+++
Sbjct: 652 ELVAKYKDRNTA 663


>dbj|BAD81296.1| unknown protein [Oryza sativa (japonica cultivar-group)]
          Length = 349

 Score =  131 bits (330), Expect = 1e-28
 Identities = 103/329 (31%), Positives = 162/329 (48%), Gaps = 36/329 (10%)

Query: 611 LETSEAFFRNLSNRIQQGIESDVIDLVALAERLVNSSIYWLCQKVDRETIPLIQVHSPLK 670
           +E  EAF  ++  +I+Q + S+  DL  LA RLV  S++ L  K  + ++   +  +  +
Sbjct: 1   MEDLEAFLDSVPQKIEQSLCSEDADLGNLAGRLVGLSVHALMIKHGKISV---RYSNRGE 57

Query: 671 DNNACGSMVVSELVKQLLKDPKDIAAKHKSRDSS---SQAFDAAGPTIR---YELQILFR 724
             +     +  E    LL  PK++ AK+K R+++   SQ       T +   +ELQIL R
Sbjct: 58  VEDVSDGKIACEASGILLVKPKELVAKYKDRNTACATSQEIPKYSTTYKIREHELQILLR 117

Query: 725 LEILQSEVGRGIEDSSKQKFVKQICLLLENIQCHMEGGFFGDWNLENYVAKIIKSRYSHT 784
           +EI++SE+G GIE+ SKQK +K+IC LL+ I  +++G  F   ++  +  K IK RY  +
Sbjct: 118 MEIMKSELGPGIEEGSKQKMIKEICSLLQFIDINLQGDSFQSNSILEFAEKTIKIRYIES 177

Query: 785 LEDIVHKIYNKMDLLLFVNEDEAPDCSFNSEDSSKSLDRKFYGDEMGENDVGNGPFSAEN 844
           +ED++ KIY +M+  LF   D+  +CS +   SS             + D  N      N
Sbjct: 178 MEDVIKKIYTEMEFDLF---DDEVECSESLPSSSNH-----------DVDGSNSRRHRSN 223

Query: 845 KPFHLQKNVRG-------KLQRNIEGGHNKTLIEALKIRMPAL-RVWAPKQKGMK----- 891
              HL +   G       +L R  E  +    + +    +P L RVWA K  G +     
Sbjct: 224 SAPHLLRRDHGGGSSHEERLARAEERRNRDRRLSSFTSWVPDLRRVWALKHPGKEPAAAA 283

Query: 892 SKKDHLSKIPKRKDRTSACYDTVCETPMT 920
             +       +RK R +AC D VCETPMT
Sbjct: 284 PPQSRQGASKRRKRRRAACTDMVCETPMT 312


>ref|NP_913401.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
          Length = 182

 Score = 51.2 bits (121), Expect = 2e-04
 Identities = 45/154 (29%), Positives = 65/154 (41%), Gaps = 27/154 (17%)

Query: 780 RYSHTLEDIVHKIYNKMDLLLFVNEDEAPDCSFNSEDSSKSLDRKFYGDEMGENDVGNGP 839
           RY  ++ED++ KIY +M+  LF   D+  +CS +   SS             + D  N  
Sbjct: 6   RYIESMEDVIKKIYTEMEFDLF---DDEVECSESLPSSSNH-----------DVDGSNSR 51

Query: 840 FSAENKPFHLQKNVRG-------KLQRNIEGGHNKTLIEALKIRMPALR-VWAPKQKGMK 891
               N   HL +   G       +L R  E  +    + +    +P LR VWA K  G +
Sbjct: 52  RHRSNSAPHLLRRDHGGGSSHEERLARAEERRNRDRRLSSFTSWVPDLRRVWALKHPGKE 111

Query: 892 SK-----KDHLSKIPKRKDRTSACYDTVCETPMT 920
                  +       +RK R +AC D VCETPMT
Sbjct: 112 PAAAAPPQSRQGASKRRKRRRAACTDMVCETPMT 145


>gb|AAF18882.1| NADH dehydrogenase subunit 2 [Liolaemus salinicola]
          Length = 344

 Score = 40.4 bits (93), Expect = 0.29
 Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 15/149 (10%)

Query: 18  VLLIDLDPLLLLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSL 70
           +L I+L   LL+     TTT ++  I++ SKT+      +S  P+ T+  A        L
Sbjct: 200 ILAINLAIYLLM-----TTTMFLMLIMTKSKTIQDLSLSWSLSPMITTFMALTLLSLGGL 254

Query: 71  PPHLSFSKLHPFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLH 130
           PP   F      + + +     P +T   +S  LS +    LTY    + L  S    + 
Sbjct: 255 PPLTGFMPKWLIIEELTLQNLTPMATMLAMSALLSLYFYLRLTYT---STLTMSPNSTMT 311

Query: 131 DYPWEPNSDADTDTTTPLVSPNLILLFTP 159
            Y W  N    T  T PL +  L+L  TP
Sbjct: 312 KYKWRYNMKNHTIFTIPLPAALLLLPITP 340


>ref|XP_319986.2| ENSANGP00000005315 [Anopheles gambiae str. PEST]
           gi|55235549|gb|EAA14712.2| ENSANGP00000005315 [Anopheles
           gambiae str. PEST]
          Length = 236

 Score = 39.7 bits (91), Expect = 0.49
 Identities = 42/173 (24%), Positives = 73/173 (41%), Gaps = 19/173 (10%)

Query: 564 QIFAEGTDSKLNELPQNGEQPIPQVVMSAGINAEVDTKKDDAVL-DCGLETSEAFFRNLS 622
           Q+ A GT  K NE  Q G  P     + A +NAE+D  K + +  D  L  +E   R+L 
Sbjct: 44  QLAAGGTAGKPNEPTQPGVPPEEINAVRAELNAEIDKLKSEILAKDQKLHLTEELKRSLE 103

Query: 623 NRIQ---------QGIESDVIDLVALAERLVNSSIYWLCQKVDRETIPLIQVHSPLKDNN 673
           N IQ         +   +  +  + ++E  +   I +L  +VD ++  L    + L+   
Sbjct: 104 NEIQNLHEKVADAERAAASKLSALTISEECLKEQINYLEHRVDEQSDQLTVKDAELEKQY 163

Query: 674 ACGSMVVSELVKQL------LKDPKDIAAKHKSRDSSSQAFDAAGPTIRYELQ 720
                  SE  ++L      L+  KD+ A+   RD   Q  +     +R +++
Sbjct: 164 LALKNAESEQEERLAALQDELRSKKDLLAE---RDQQVQLLEQTVEELRADVR 213


>gb|AAY21667.1| NADH dehydrogenase subunit 2 [Liolaemus melanops]
          Length = 345

 Score = 38.5 bits (88), Expect = 1.1
 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT +I  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFIMLIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N+  
Sbjct: 265 LIIEELTMQSLTPLATTLAMSALLSLYFYLRLTY---TSALTMSPNSAMTKHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAF18861.1| NADH dehydrogenase subunit 2 [Liolaemus cuyanus]
          Length = 345

 Score = 38.5 bits (88), Expect = 1.1
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMLIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATTLAMSALLSLYFYLRLTY---TSTLTMSPNSAMTKHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAV67846.1| NADH dehydrogenase subunit 2 [Liolaemus cf. melanops]
          Length = 345

 Score = 38.1 bits (87), Expect = 1.4
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMMIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATTLAMSALLSLYFYLRLTY---TSALTMSPNSAMTKHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAY21670.1| NADH dehydrogenase subunit 2 [Liolaemus cf. melanops]
          Length = 345

 Score = 38.1 bits (87), Expect = 1.4
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMMIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATTLAMSALLSLYFYLRLTY---TSALTMSPNSAMTKHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAB48282.1| NADH dehydrogenase subunit II [Mabuya aurata]
           gi|7432158|pir||T14053 NADH2 dehydrogenase (ubiquinone)
           (EC 1.6.5.3) chain 2 - Mabuya aurata mitochondrion
          Length = 345

 Score = 37.7 bits (86), Expect = 1.9
 Identities = 41/165 (24%), Positives = 71/165 (42%), Gaps = 21/165 (12%)

Query: 12  SHTNRIVLLIDLDP----LLLLLHNTTTTTNYIKNILSTSKTLFSF-------PPLSTSL 60
           +H   +  ++ L+P    L LLL+   TT  ++   L+TSKT+          PP++ ++
Sbjct: 185 AHLGWMASILTLNPNILILNLLLYIIMTTPMFLMLELTTSKTIKDLTTSWTISPPMTATM 244

Query: 61  FAFKFFFSSLPPHLSFSKLHPFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAAN 120
            A       LPP   F      L + +       +T  +LS  LS F    L+Y      
Sbjct: 245 MALLMSLGGLPPLTGFMPKWLVLQELTTHNLTMTATIMVLSALLSLFFYLRLSYT-STLT 303

Query: 121 LIDSLTQLLHDYPWEPNSDADTDTTTPLVSPN----LILLFTPFF 161
           +  + T+  + + ++P       TT P+++P     L+L  TP F
Sbjct: 304 VYPTTTKSSYKWRFQPKL-----TTMPIMAPTVLSLLLLPMTPMF 343


>ref|XP_532380.1| PREDICTED: similar to Sec3-like isoform 2 [Canis familiaris]
          Length = 879

 Score = 37.7 bits (86), Expect = 1.9
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 11/150 (7%)

Query: 501 LRNLTWSSFYDLVYDQFEMDLH--EVYYAMECNKSKKLKFLKCWMK---QVKKSSCHDLN 555
           LR+L      D + +  E DLH  ++Y  +  + ++K  F+ C  K   +  +     +N
Sbjct: 72  LRDLAVVDAKDAIKENPEFDLHFEKIYKWVASSTAEKNAFISCIWKLNQRYLRKKIDFVN 131

Query: 556 LSEYPKPNQIFAEGTDSKLNELPQNGEQPIPQVVMSAGINAEVDTKKDDAVLDCGLETSE 615
           +S     +Q+  E   S  N+    G++ +  V        E D +      +C +  +E
Sbjct: 132 VS-----SQLLEESVPSGENQSVTGGDEEVVDVYQELNAREEQDIEIMMEGCECAISNAE 186

Query: 616 AFFRNLSNRIQQGIESDVIDLVALAERLVN 645
           AF   LS  +Q  ++   I  +  +E+ VN
Sbjct: 187 AFAERLSRELQV-LDGANIQSIMASEKQVN 215


>gb|AAV67850.1| NADH dehydrogenase subunit 2 [Liolaemus xanthoviridis]
           gi|6601232|gb|AAF18864.1| NADH dehydrogenase subunit 2
           [Liolaemus fitzingerii]
          Length = 345

 Score = 37.7 bits (86), Expect = 1.9
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMLIMTKSKTIQDLSLSWSISPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATTLAMSALLSLYFYLRLTY---TSALTMSPNSAMTKHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAP84578.1| NADH dehydrogenase subunit 2 [Liolaemus canqueli]
          Length = 345

 Score = 37.7 bits (86), Expect = 1.9
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMLIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATTLAMSALLSLYFYLRLTY---TSALTMSPNSAMTKHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAL72020.1| NADH dehydrogenase subunit 2 [Anolis transversalis]
          Length = 345

 Score = 37.7 bits (86), Expect = 1.9
 Identities = 44/148 (29%), Positives = 61/148 (40%), Gaps = 16/148 (10%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL-------FSFPPLSTSLFAFKFFFSSLPPHLSFSKLH 80
           LL++ T TTT +   ILS SKT+        + P ++T +         LPP   F    
Sbjct: 205 LLMYLTMTTTMFCLLILSKSKTIQDTANTWTTSPTMTTIMMLTLLSLGGLPPLTGFLPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             L + +     P +T   LS  LS F    LTY   +A L  S       Y W   S  
Sbjct: 265 LILEELTMQNLLPMATIMALSSLLSLFFYLRLTY---SATLTLSPNNAQTKYKWRFKS-- 319

Query: 141 DTDTTTPLV--SPNLILLFTPFFNSFNS 166
            T  T PL+  +P  +LL  P   + N+
Sbjct: 320 -TMNTLPLILMTPASLLLM-PILPTMNN 345


>gb|AAY21661.1| NADH dehydrogenase subunit 2 [Liolaemus cuyanus]
          Length = 345

 Score = 37.7 bits (86), Expect = 1.9
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMLIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY    + L  S    +  + W  N   
Sbjct: 265 LIIEELALQSLTPLATTLAMSALLSLYFYLRLTY---TSTLTMSPNSAMTKHKWRFNMKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAH37446.1| Ikbke protein [Mus musculus]
          Length = 693

 Score = 37.4 bits (85), Expect = 2.4
 Identities = 31/125 (24%), Positives = 54/125 (42%), Gaps = 7/125 (5%)

Query: 419 KGGGSCVGILRPFTVSSALLSVLEDPQSASDFGAANMNSFIRTGI-----LKSDRIFHKN 473
           +GG     ++  +  S +LLSVLEDP++            +R  +     L+ + I H  
Sbjct: 52  QGGSRQKVLIMEYCSSGSLLSVLEDPENTFGLSEEEFLVVLRCVVAGMNHLRENGIVH-- 109

Query: 474 RDLVDSQVKDVVGIKGEQKKKMTDLSALRNLTWSSFYDLVYDQFEMDLHEVYYAMECNKS 533
           RD+    +  +VG +G+   K++D  A R L     +  VY   E    ++Y      K 
Sbjct: 110 RDIKPGNIMRLVGEEGQSIYKLSDFGAARKLDDDEKFVSVYGTEEYLHPDMYERAVLRKP 169

Query: 534 KKLKF 538
           ++  F
Sbjct: 170 QQKAF 174


>gb|AAQ09217.1| NADH dehydrogenase subunit 2 [Microlophus atacamensis]
          Length = 344

 Score = 37.4 bits (85), Expect = 2.4
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 25/161 (15%)

Query: 14  TNRIVLLIDLDPLLLLLHNTTTTTNYIKNILSTSKTL-------FSFPPLSTSLFAFKFF 66
           T    +L +L  L L+++ T TTT +   ILS SKT+        + P L+T +      
Sbjct: 191 TTASFMLTNLMVLNLIIYITMTTTMFSTLILSNSKTIKDTTTLPTTSPALTTIMALTLLS 250

Query: 67  FSSLPPHLSFSKLHPFLPKHSFSFD------HPFSTFNLLSKTLSTFPNFPLTYNPKAAN 120
              LPP      L  F+PK     +       P ++   +S  LS F    LTY      
Sbjct: 251 LGGLPP------LSGFMPKWLIMEELINQSLIPAASLMAMSALLSLFFYLRLTYT-TTMT 303

Query: 121 LIDSLTQLLHDYPWEPNSDADT--DTTTPLVSPNLILLFTP 159
           L  + T  +H + + PN + +    TTTPL    L+L  TP
Sbjct: 304 LSPNQTTAMHKWRF-PNQNMNVLISTTTPLTL--LLLPMTP 341


>gb|AAV67848.1| NADH dehydrogenase subunit 2 [Liolaemus canqueli]
          Length = 345

 Score = 37.4 bits (85), Expect = 2.4
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMLIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY        +S T     + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATTLAMSALLSLYFYLRLTYTSALTMSPNSATT---KHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


>gb|AAP84575.1| NADH dehydrogenase subunit 2 [Liolaemus xanthoviridis]
          Length = 345

 Score = 37.4 bits (85), Expect = 2.4
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 11/140 (7%)

Query: 28  LLLHNTTTTTNYIKNILSTSKTL------FSFPPLSTSLFAFKFF-FSSLPPHLSFSKLH 80
           L+++   TTT ++  I++ SKT+      +S  P+ TSL          LPP   F    
Sbjct: 205 LIIYLLMTTTMFLMLIMTKSKTIQDLSLSWSMSPMITSLTTLVLLSLGGLPPLTGFIPKW 264

Query: 81  PFLPKHSFSFDHPFSTFNLLSKTLSTFPNFPLTYNPKAANLIDSLTQLLHDYPWEPNSDA 140
             + + +     P +T   +S  LS +    LTY        +S T     + W  N+  
Sbjct: 265 LIIEELTLQSLTPLATALAMSALLSLYFYLRLTYTSALTMSPNSATT---KHKWRFNTKT 321

Query: 141 DTDT-TTPLVSPNLILLFTP 159
            T   TTPL +  L+L  TP
Sbjct: 322 PTTIFTTPLPAALLLLPITP 341


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.320    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,657,589,520
Number of Sequences: 2540612
Number of extensions: 72384720
Number of successful extensions: 155047
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 154995
Number of HSP's gapped (non-prelim): 57
length of query: 972
length of database: 863,360,394
effective HSP length: 138
effective length of query: 834
effective length of database: 512,755,938
effective search space: 427638452292
effective search space used: 427638452292
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)


Medicago: description of AC121241.8