BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121239.10 - phase: 0
(90 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana] 134 6e-31
ref|NP_680210.2| aminoacyl-tRNA synthetase family protein [Arabi... 134 6e-31
ref|ZP_00325583.1| COG0013: Alanyl-tRNA synthetase [Trichodesmiu... 105 4e-22
ref|YP_171374.1| alanyl-tRNA synthetase [Synechococcus elongatus... 102 3e-21
ref|ZP_00164019.1| COG0013: Alanyl-tRNA synthetase [Synechococcu... 102 3e-21
sp|Q8YUD4|SYA_ANASP Alanyl-tRNA synthetase (Alanine--tRNA ligase... 101 4e-21
ref|ZP_00161466.2| COG0013: Alanyl-tRNA synthetase [Anabaena var... 100 7e-21
ref|NP_925294.1| alanyl-tRNA synthetase [Gloeobacter violaceus P... 100 9e-21
ref|ZP_00516098.1| Alanine--tRNA ligase [Crocosphaera watsonii W... 98 5e-20
emb|CAE22331.1| Alanyl-tRNA synthetase:DHHA1 domain [Prochloroco... 97 8e-20
emb|CAE08875.1| Alanyl-tRNA synthetase [Synechococcus sp. WH 810... 93 2e-18
ref|NP_441845.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6... 92 2e-18
gb|AAP99094.1| Alanyl-tRNA synthetase [Prochlorococcus marinus s... 92 3e-18
gb|AAK49025.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7002] 88 5e-17
gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis] 80 1e-14
ref|NP_682893.1| alanyl-tRNA synthetase [Thermosynechococcus elo... 78 5e-14
sp|Q8DH56|SYA_SYNEL Alanyl-tRNA synthetase (Alanine--tRNA ligase... 78 5e-14
sp|Q8XJH6|SYA_CLOPE Alanyl-tRNA synthetase (Alanine--tRNA ligase... 76 2e-13
ref|YP_080013.1| alanyl-tRNA synthetase [Bacillus licheniformis ... 75 4e-13
dbj|BAB04986.1| alanyl-tRNA synthetase [Bacillus halodurans C-12... 75 5e-13
>dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 954
Score = 134 bits (337), Expect = 6e-31
Identities = 65/88 (73%), Positives = 74/88 (83%)
Query: 1 METLADPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFA 60
+ TL DP A+VLGS P + KVSLVAAF+PGVV G+QAGKFIG IAKLCGGGGGG+PNFA
Sbjct: 865 ISTLEDPVAVVLGSSPEKDKVSLVAAFSPGVVSLGVQAGKFIGPIAKLCGGGGGGKPNFA 924
Query: 61 QAGGRKPENLAGALEKAKSELIAYLCEK 88
QAGGRKPENL ALEKA+ +L+A L EK
Sbjct: 925 QAGGRKPENLPSALEKAREDLVATLSEK 952
>ref|NP_680210.2| aminoacyl-tRNA synthetase family protein [Arabidopsis thaliana]
Length = 978
Score = 134 bits (337), Expect = 6e-31
Identities = 65/88 (73%), Positives = 74/88 (83%)
Query: 1 METLADPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFA 60
+ TL DP A+VLGS P + KVSLVAAF+PGVV G+QAGKFIG IAKLCGGGGGG+PNFA
Sbjct: 889 ISTLEDPVAVVLGSSPEKDKVSLVAAFSPGVVSLGVQAGKFIGPIAKLCGGGGGGKPNFA 948
Query: 61 QAGGRKPENLAGALEKAKSELIAYLCEK 88
QAGGRKPENL ALEKA+ +L+A L EK
Sbjct: 949 QAGGRKPENLPSALEKAREDLVATLSEK 976
>ref|ZP_00325583.1| COG0013: Alanyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
Length = 874
Score = 105 bits (261), Expect = 4e-22
Identities = 53/77 (68%), Positives = 61/77 (78%), Gaps = 1/77 (1%)
Query: 6 DPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGR 65
D +A+VLGS EGKVSLVAAF+ V G+G+QAGKFIG IAK+CGGGGGGRPN AQAGGR
Sbjct: 795 DESAVVLGSA-AEGKVSLVAAFSKSVNGKGLQAGKFIGGIAKICGGGGGGRPNLAQAGGR 853
Query: 66 KPENLAGALEKAKSELI 82
P L ALE AK +L+
Sbjct: 854 DPSKLKEALESAKEQLV 870
>ref|YP_171374.1| alanyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|56685632|dbj|BAD78854.1| alanyl-tRNA synthetase
[Synechococcus elongatus PCC 6301]
Length = 892
Score = 102 bits (253), Expect = 3e-21
Identities = 49/84 (58%), Positives = 64/84 (75%), Gaps = 4/84 (4%)
Query: 2 ETLADPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQ 61
+ L D A+VLGS P EGKV+LVAAF P ++ +G++AG+FIG IAK+CGGGGGGRPN AQ
Sbjct: 807 QKLGDAGAVVLGSSPEEGKVTLVAAFGPAIIAKGLKAGQFIGGIAKICGGGGGGRPNLAQ 866
Query: 62 AGGRK----PENLAGALEKAKSEL 81
AGGR PE +A AL++ K+ +
Sbjct: 867 AGGRDASKLPEAIAAALDQLKTAI 890
>ref|ZP_00164019.1| COG0013: Alanyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
Length = 876
Score = 102 bits (253), Expect = 3e-21
Identities = 49/84 (58%), Positives = 64/84 (75%), Gaps = 4/84 (4%)
Query: 2 ETLADPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQ 61
+ L D A+VLGS P EGKV+LVAAF P ++ +G++AG+FIG IAK+CGGGGGGRPN AQ
Sbjct: 791 QKLGDAGAVVLGSSPEEGKVTLVAAFGPAIIAKGLKAGQFIGGIAKICGGGGGGRPNLAQ 850
Query: 62 AGGRK----PENLAGALEKAKSEL 81
AGGR PE +A AL++ K+ +
Sbjct: 851 AGGRDASKLPEAIAAALDQLKTAI 874
>sp|Q8YUD4|SYA_ANASP Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS)
gi|17131510|dbj|BAB74117.1| alanyl-tRNA synthetase
[Nostoc sp. PCC 7120] gi|17229910|ref|NP_486458.1|
alanyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 880
Score = 101 bits (252), Expect = 4e-21
Identities = 51/73 (69%), Positives = 58/73 (78%)
Query: 9 AIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPE 68
A+VLGS P KVSLVAAF+P V +G+QAGKFIG IAK+CGGGGGGRPN AQAGGR
Sbjct: 803 AVVLGSVPEADKVSLVAAFSPEVNKKGLQAGKFIGAIAKICGGGGGGRPNLAQAGGRDAS 862
Query: 69 NLAGALEKAKSEL 81
L ALE+A+SEL
Sbjct: 863 KLPAALEQAQSEL 875
>ref|ZP_00161466.2| COG0013: Alanyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 880
Score = 100 bits (250), Expect = 7e-21
Identities = 51/73 (69%), Positives = 58/73 (78%)
Query: 9 AIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPE 68
A+VLGS P KVSLVAAF+P V +G+QAGKFIG IAK+CGGGGGGRPN AQAGGR
Sbjct: 803 AVVLGSVPEADKVSLVAAFSPEVNKKGLQAGKFIGAIAKICGGGGGGRPNLAQAGGRDAS 862
Query: 69 NLAGALEKAKSEL 81
L ALE+A+SEL
Sbjct: 863 KLPTALEQAQSEL 875
>ref|NP_925294.1| alanyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
gi|44888325|sp|Q7NI36|SYA_GLOVI Alanyl-tRNA synthetase
(Alanine--tRNA ligase) (AlaRS)
gi|35212916|dbj|BAC90289.1| alanyl-tRNA synthetase
[Gloeobacter violaceus PCC 7421]
Length = 871
Score = 100 bits (249), Expect = 9e-21
Identities = 47/78 (60%), Positives = 59/78 (75%)
Query: 4 LADPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAG 63
L + A+VLGS P KVSLVAAF G V +G+ AGKF+G++AK+ GGGGGGRPN AQAG
Sbjct: 788 LGEGGAVVLGSAPAADKVSLVAAFGKGAVAKGLNAGKFVGEVAKITGGGGGGRPNLAQAG 847
Query: 64 GRKPENLAGALEKAKSEL 81
G++PE L AL +A S+L
Sbjct: 848 GKQPEKLKNALSEASSKL 865
>ref|ZP_00516098.1| Alanine--tRNA ligase [Crocosphaera watsonii WH 8501]
gi|67855520|gb|EAM50773.1| Alanine--tRNA ligase
[Crocosphaera watsonii WH 8501]
Length = 269
Score = 98.2 bits (243), Expect = 5e-20
Identities = 50/74 (67%), Positives = 58/74 (77%), Gaps = 1/74 (1%)
Query: 9 AIVLGSCPGEGKVSLVAAFTPGVVGQG-IQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKP 67
A++LGS P EGKVSLVAAF+ V + +QAGKFIGQIAK+CGGGGGGRPN AQAGGR P
Sbjct: 191 AVILGSIPSEGKVSLVAAFSKKVNKEKQLQAGKFIGQIAKICGGGGGGRPNLAQAGGRDP 250
Query: 68 ENLAGALEKAKSEL 81
L+ AL AK +L
Sbjct: 251 SKLSEALSTAKQQL 264
>emb|CAE22331.1| Alanyl-tRNA synthetase:DHHA1 domain [Prochlorococcus marinus str.
MIT 9313] gi|33864421|ref|NP_895981.1| Alanyl-tRNA
synthetase:DHHA1 domain [Prochlorococcus marinus str.
MIT 9313] gi|41018180|sp|Q7V419|SYA_PROMM Alanyl-tRNA
synthetase (Alanine--tRNA ligase) (AlaRS)
Length = 892
Score = 97.4 bits (241), Expect = 8e-20
Identities = 53/84 (63%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 METLADPAAIVLGSCPG---EGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRP 57
++ L D AA+VLG P EGKV LVAAF ++ QG QAGKFIG IAK CGGGGGGRP
Sbjct: 804 LDQLGDGAAVVLGGLPDPSDEGKVILVAAFGKQLIAQGQQAGKFIGSIAKRCGGGGGGRP 863
Query: 58 NFAQAGGRKPENLAGALEKAKSEL 81
N AQAGGR L GALE AK +L
Sbjct: 864 NLAQAGGRDGAALDGALEAAKVDL 887
>emb|CAE08875.1| Alanyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|33866890|ref|NP_898449.1| Alanyl-tRNA synthetase
[Synechococcus sp. WH 8102]
gi|41018174|sp|Q7U3R9|SYA_SYNPX Alanyl-tRNA synthetase
(Alanine--tRNA ligase) (AlaRS)
Length = 889
Score = 92.8 bits (229), Expect = 2e-18
Identities = 52/87 (59%), Positives = 58/87 (65%), Gaps = 3/87 (3%)
Query: 2 ETLADPAAIVLGSCPGEG---KVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPN 58
+ L D AA+V+G P G KV LVAAF V+ +QAGKFIG IAK CGGGGGGRPN
Sbjct: 800 DQLGDGAAVVIGGLPDPGDLGKVILVAAFGKQVIAAKLQAGKFIGGIAKQCGGGGGGRPN 859
Query: 59 FAQAGGRKPENLAGALEKAKSELIAYL 85
AQAGGR L GAL A+SEL A L
Sbjct: 860 LAQAGGRDGAALPGALAAARSELAAAL 886
>ref|NP_441845.1| alanyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|1653611|dbj|BAA18523.1| alanyl-tRNA synthetase
[Synechocystis sp. PCC 6803]
gi|2500959|sp|P74423|SYA_SYNY3 Alanyl-tRNA synthetase
(Alanine--tRNA ligase) (AlaRS)
Length = 877
Score = 92.4 bits (228), Expect = 2e-18
Identities = 49/79 (62%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 8 AAIVLGSCPGEGKVSLVAAFTPGVVG-QGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRK 66
+A+VL S P EGKVSLVAAF+P +V + ++AG+FIG IAK+CGGGGGGRPN AQAGGR
Sbjct: 798 SAVVLASIPEEGKVSLVAAFSPQLVKTKQLKAGQFIGAIAKICGGGGGGRPNLAQAGGRD 857
Query: 67 PENLAGALEKAKSELIAYL 85
L AL AK L+A L
Sbjct: 858 ASKLPEALATAKQTLLAEL 876
>gb|AAP99094.1| Alanyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375] gi|33239500|ref|NP_874442.1| Alanyl-tRNA
synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 892
Score = 92.0 bits (227), Expect = 3e-18
Identities = 47/88 (53%), Positives = 60/88 (67%), Gaps = 3/88 (3%)
Query: 1 METLADPAAIVLGSCPG---EGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRP 57
++ L D AA+VL P + KV LVAAF ++ QG+ AG+F+G IA++CGGGGGGRP
Sbjct: 804 VDELGDNAAVVLAGMPDLNDQKKVILVAAFGSEIIAQGLHAGQFLGPIAEICGGGGGGRP 863
Query: 58 NFAQAGGRKPENLAGALEKAKSELIAYL 85
NFAQAGGR P L AL+ AK +I L
Sbjct: 864 NFAQAGGRDPTKLDDALDLAKERIIQSL 891
>gb|AAK49025.1| alanyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 73
Score = 88.2 bits (217), Expect = 5e-17
Identities = 45/67 (67%), Positives = 51/67 (75%), Gaps = 1/67 (1%)
Query: 16 PGEGKVSLVAAFTPGVV-GQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPENLAGAL 74
P +GKVSLVAAF+ G+ G+ +QAGKFIG IAKLCGGGGGGRPN AQAGGR L AL
Sbjct: 2 PEDGKVSLVAAFSEGIYKGKKVQAGKFIGGIAKLCGGGGGGRPNLAQAGGRDASKLPEAL 61
Query: 75 EKAKSEL 81
AK +L
Sbjct: 62 HTAKQQL 68
>gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis]
Length = 883
Score = 80.1 bits (196), Expect = 1e-14
Identities = 40/72 (55%), Positives = 52/72 (71%), Gaps = 1/72 (1%)
Query: 10 IVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPEN 69
++LGS G+ KV+LVA+ T +VG+G+ AG I + AK CGGGGGGRP+ AQAGG+ P
Sbjct: 808 LILGSVVGD-KVNLVASATKDIVGRGVHAGNLIKEAAKTCGGGGGGRPDMAQAGGKDPSK 866
Query: 70 LAGALEKAKSEL 81
LA AL+ AK L
Sbjct: 867 LAEALDAAKKLL 878
>ref|NP_682893.1| alanyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|22295830|dbj|BAC09655.1| alanyl-tRNA synthetase
[Thermosynechococcus elongatus BP-1]
Length = 891
Score = 78.2 bits (191), Expect = 5e-14
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 9 AIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPE 68
A+VL + P KV+L+ A + VV +G+ AG+ + +A++CGG GGGRPNFAQAGG +P
Sbjct: 813 AVVLATQPAADKVNLLVAASQDVVQRGVHAGQLVAALAQVCGGRGGGRPNFAQAGGSQPA 872
Query: 69 NLAGALEKAKSEL 81
LA ALE A S L
Sbjct: 873 KLAEALELAHSRL 885
>sp|Q8DH56|SYA_SYNEL Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS)
Length = 882
Score = 78.2 bits (191), Expect = 5e-14
Identities = 38/73 (52%), Positives = 51/73 (69%)
Query: 9 AIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPE 68
A+VL + P KV+L+ A + VV +G+ AG+ + +A++CGG GGGRPNFAQAGG +P
Sbjct: 804 AVVLATQPAADKVNLLVAASQDVVQRGVHAGQLVAALAQVCGGRGGGRPNFAQAGGSQPA 863
Query: 69 NLAGALEKAKSEL 81
LA ALE A S L
Sbjct: 864 KLAEALELAHSRL 876
>sp|Q8XJH6|SYA_CLOPE Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS)
gi|18145443|dbj|BAB81486.1| alanine-tRNA ligase
[Clostridium perfringens str. 13]
gi|18310762|ref|NP_562696.1| alanine-tRNA ligase
[Clostridium perfringens str. 13]
Length = 879
Score = 76.3 bits (186), Expect = 2e-13
Identities = 39/69 (56%), Positives = 49/69 (70%), Gaps = 1/69 (1%)
Query: 10 IVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPEN 69
+VL S G GKV+LVA T + G+ GK I ++A + GGGGGGRP+ AQAGG+ PEN
Sbjct: 804 VVLASDNG-GKVNLVAMATKNSLANGVHCGKVIKEVAAVVGGGGGGRPDMAQAGGKNPEN 862
Query: 70 LAGALEKAK 78
+A ALEKAK
Sbjct: 863 IAKALEKAK 871
>ref|YP_080013.1| alanyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
gi|52004433|gb|AAU24375.1| alanyl-tRNA synthetase
[Bacillus licheniformis ATCC 14580]
gi|52786603|ref|YP_092432.1| AlaS [Bacillus
licheniformis ATCC 14580] gi|52349105|gb|AAU41739.1|
AlaS [Bacillus licheniformis DSM 13]
gi|59798507|sp|Q65GS5|SYA_BACLD Alanyl-tRNA synthetase
(Alanine--tRNA ligase) (AlaRS)
Length = 878
Score = 75.1 bits (183), Expect = 4e-13
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 8 AAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKP 67
A IVLG+ E KV++ A T ++ +G AGK + Q+A+ CGGGGGGRP+ AQAGG++P
Sbjct: 802 AVIVLGAVQNE-KVNISAGVTKDLIERGFHAGKLVKQVAEACGGGGGGRPDMAQAGGKQP 860
Query: 68 ENLAGALEKAK 78
E LA AL A+
Sbjct: 861 ERLAEALASAE 871
>dbj|BAB04986.1| alanyl-tRNA synthetase [Bacillus halodurans C-125]
gi|20139935|sp|Q9KDE6|SYA_BACHD Alanyl-tRNA synthetase
(Alanine--tRNA ligase) (AlaRS)
gi|15613830|ref|NP_242133.1| alanyl-tRNA synthetase
[Bacillus halodurans C-125]
Length = 879
Score = 74.7 bits (182), Expect = 5e-13
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 7 PAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRK 66
P+ +++ EGKV++VA T ++ +G AGK + ++A CGGGGGGRP+ AQAGG++
Sbjct: 801 PSVVIVLGTASEGKVNIVAGVTKDLINKGYHAGKLVKEVATRCGGGGGGRPDMAQAGGKQ 860
Query: 67 PENLAGAL 74
PE L AL
Sbjct: 861 PEKLQDAL 868
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.139 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,906,989
Number of Sequences: 2540612
Number of extensions: 7377501
Number of successful extensions: 26834
Number of sequences better than 10.0: 354
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 26415
Number of HSP's gapped (non-prelim): 437
length of query: 90
length of database: 863,360,394
effective HSP length: 66
effective length of query: 24
effective length of database: 695,680,002
effective search space: 16696320048
effective search space used: 16696320048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC121239.10