BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121238.7 - phase: 0
(83 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP13391.1| At2g45140 [Arabidopsis thaliana] gi|21594019|gb|A... 88 5e-17
ref|XP_480176.1| putative vesicle-associated membrane protein-as... 86 2e-16
gb|AAM63134.1| putative VAMP-associated protein [Arabidopsis tha... 86 3e-16
gb|AAQ63968.1| VAP27-1 [Arabidopsis thaliana] gi|30023744|gb|AAP... 85 4e-16
emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia] gi|11288307|pi... 83 2e-15
emb|CAB82664.1| putative protein [Arabidopsis thaliana] gi|11288... 75 4e-13
dbj|BAD94633.1| hypothetical protein [Arabidopsis thaliana] 74 7e-13
ref|NP_175538.1| vesicle-associated membrane protein, putative /... 74 7e-13
pir||E96550 hypothetical protein F11M15.13 [imported] - Arabidop... 74 7e-13
ref|XP_480160.1| putative 27k vesicle-associated membrane protei... 72 3e-12
ref|XP_467169.1| vesicle-associated membraneprotein-like [Oryza ... 72 5e-12
ref|XP_467003.1| putative vesicle-associated membrane protein-as... 72 5e-12
emb|CAB80775.1| putative proline-rich protein [Arabidopsis thali... 70 1e-11
gb|AAM64824.1| putative proline-rich protein [Arabidopsis thaliana] 70 1e-11
ref|NP_567153.1| vesicle-associated membrane family protein / VA... 70 1e-11
ref|NP_172359.2| vesicle-associated membrane family protein / VA... 67 1e-10
gb|AAF99771.1| F22O13.31 [Arabidopsis thaliana] gi|25407055|pir|... 67 1e-10
pir||T00738 hypothetical protein F22O13.33 - Arabidopsis thaliana 67 1e-10
gb|AAP54536.1| putative vesicle-associated membrane protein [Ory... 66 3e-10
gb|AAC63657.1| unknown protein [Arabidopsis thaliana] gi|2541216... 63 2e-09
>gb|AAP13391.1| At2g45140 [Arabidopsis thaliana] gi|21594019|gb|AAM65937.1|
putative VAMP-associated protein [Arabidopsis thaliana]
gi|20260230|gb|AAM13013.1| putative VAMP-associated
protein [Arabidopsis thaliana] gi|4895238|gb|AAD32823.1|
putative VAMP (vesicle-associated membrane
protein)-associated protein [Arabidopsis thaliana]
gi|15225415|ref|NP_182039.1| vesicle-associated membrane
protein, putative / VAMP, putative [Arabidopsis
thaliana] gi|25363150|pir||H84886 probable
VAMP-associated protein [imported] - Arabidopsis
thaliana
Length = 239
Score = 88.2 bits (217), Expect = 5e-17
Identities = 40/64 (62%), Positives = 51/64 (79%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +EAP D+QCKDKFLLQ +VA PGAT KD+T +MF K++G+ V+E+K R V VAPP
Sbjct: 70 MQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRVVYVAPPR 129
Query: 61 SPNP 64
P+P
Sbjct: 130 PPSP 133
>ref|XP_480176.1| putative vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
gi|37805852|dbj|BAC99503.1| putative vesicle-associated
membrane protein-associated protein [Oryza sativa
(japonica cultivar-group)]
Length = 243
Score = 86.3 bits (212), Expect = 2e-16
Identities = 44/75 (58%), Positives = 52/75 (68%), Gaps = 2/75 (2%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAP-- 58
MQA EAPPDMQCKDKFL+QS++A G T KDIT +MF K+SG +V+E K R +AP
Sbjct: 77 MQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLRVTYIAPPQ 136
Query: 59 PPSPNPPLSVHASES 73
PPSP P S S S
Sbjct: 137 PPSPVPEESEEGSPS 151
>gb|AAM63134.1| putative VAMP-associated protein [Arabidopsis thaliana]
Length = 240
Score = 85.5 bits (210), Expect = 3e-16
Identities = 37/64 (57%), Positives = 49/64 (75%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +EAP DMQCKDKFLLQ ++A PG T K++T +MF K++G+ V+E+K R VAPP
Sbjct: 71 MQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPQ 130
Query: 61 SPNP 64
P+P
Sbjct: 131 PPSP 134
>gb|AAQ63968.1| VAP27-1 [Arabidopsis thaliana] gi|30023744|gb|AAP13405.1| At3g60600
[Arabidopsis thaliana] gi|17473763|gb|AAL38320.1|
putative protein [Arabidopsis thaliana]
gi|18411661|ref|NP_567101.1| vesicle-associated membrane
protein, putative / VAMP, putative [Arabidopsis
thaliana]
Length = 256
Score = 85.1 bits (209), Expect = 4e-16
Identities = 37/64 (57%), Positives = 49/64 (75%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +EAP DMQCKDKFLLQ ++A PG T K++T +MF K++G+ V+E+K R VAPP
Sbjct: 87 MQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTYVAPPR 146
Query: 61 SPNP 64
P+P
Sbjct: 147 PPSP 150
>emb|CAB65313.1| VAP27 [Nicotiana plumbaginifolia] gi|11288307|pir||JC7234 27k
vesicle-associated membrane protein-associated protein -
curled-leaved tobacco
Length = 240
Score = 83.2 bits (204), Expect = 2e-15
Identities = 41/64 (64%), Positives = 48/64 (74%), Gaps = 2/64 (3%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAP-- 58
MQA +EAP DMQCKDKFLLQS+VA PGAT KDIT +MF K+ G V++ K R + V P
Sbjct: 73 MQAQKEAPADMQCKDKFLLQSVVASPGATAKDITPEMFNKEEGNHVEDCKLRVIYVPPQQ 132
Query: 59 PPSP 62
PPSP
Sbjct: 133 PPSP 136
>emb|CAB82664.1| putative protein [Arabidopsis thaliana] gi|11288305|pir||T47871
hypothetical protein T4C21.10 - Arabidopsis thaliana
Length = 250
Score = 75.1 bits (183), Expect = 4e-13
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 4/64 (6%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +EAP DMQCKDKFLLQ ++A PG T K++T +M +G+ V+E+K R VAPP
Sbjct: 87 MQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEM----AGHRVEETKLRVTYVAPPR 142
Query: 61 SPNP 64
P+P
Sbjct: 143 PPSP 146
>dbj|BAD94633.1| hypothetical protein [Arabidopsis thaliana]
Length = 291
Score = 74.3 bits (181), Expect = 7e-13
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQAL+EAP DMQC+DK L Q V P T KD+TS+MF K++G+ +E++ + + V PP
Sbjct: 1 MQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQ 60
Query: 61 SPNP 64
P+P
Sbjct: 61 PPSP 64
>ref|NP_175538.1| vesicle-associated membrane protein, putative / VAMP, putative
[Arabidopsis thaliana]
Length = 289
Score = 74.3 bits (181), Expect = 7e-13
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQAL+EAP DMQC+DK L Q V P T KD+TS+MF K++G+ +E++ + + V PP
Sbjct: 193 MQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQ 252
Query: 61 SPNP 64
P+P
Sbjct: 253 PPSP 256
Score = 73.2 bits (178), Expect = 2e-12
Identities = 33/64 (51%), Positives = 45/64 (69%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQAL+EAP D QCKDK L Q V PG K++TS+MF K++G+ V+E+ F+ + VAPP
Sbjct: 23 MQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKIIYVAPPQ 82
Query: 61 SPNP 64
+P
Sbjct: 83 PQSP 86
>pir||E96550 hypothetical protein F11M15.13 [imported] - Arabidopsis thaliana
gi|4836937|gb|AAD30639.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 571
Score = 74.3 bits (181), Expect = 7e-13
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQAL+EAP DMQC+DK L Q V P T KD+TS+MF K++G+ +E++ + + V PP
Sbjct: 241 MQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQ 300
Query: 61 SPNP 64
P+P
Sbjct: 301 PPSP 304
Score = 73.2 bits (178), Expect = 2e-12
Identities = 33/64 (51%), Positives = 45/64 (69%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQAL+EAP D QCKDK L Q V PG K++TS+MF K++G+ V+E+ F+ + VAPP
Sbjct: 71 MQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKIIYVAPPQ 130
Query: 61 SPNP 64
+P
Sbjct: 131 PQSP 134
>ref|XP_480160.1| putative 27k vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
gi|51964702|ref|XP_507135.1| PREDICTED OJ1177_E11.5 gene
product [Oryza sativa (japonica cultivar-group)]
gi|37805977|dbj|BAC99391.1| putative 27k
vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
Length = 237
Score = 72.4 bits (176), Expect = 3e-12
Identities = 37/65 (56%), Positives = 45/65 (68%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA EAPPDMQCKDKFL+QS+ A GATT+DI+++MF K +G V+E K R V V
Sbjct: 70 MQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVYVPTTT 129
Query: 61 SPNPP 65
S P
Sbjct: 130 SSAMP 134
>ref|XP_467169.1| vesicle-associated membraneprotein-like [Oryza sativa (japonica
cultivar-group)] gi|49388505|dbj|BAD25629.1|
vesicle-associated membraneprotein-like [Oryza sativa
(japonica cultivar-group)]
Length = 136
Score = 71.6 bits (174), Expect = 5e-12
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCV-APP 59
MQ +E P D CKDKFL+QS+V G T KDI SDMF K++G V+E K R V + A P
Sbjct: 1 MQPPKEIPTDYNCKDKFLIQSVVVEDGTTQKDIHSDMFSKEAGKVVEEFKLRVVYIPANP 60
Query: 60 PSPNPPLSVHASESLD 75
PSP P +SLD
Sbjct: 61 PSPVPEEEEDEIDSLD 76
>ref|XP_467003.1| putative vesicle-associated membrane protein-associated protein
[Oryza sativa (japonica cultivar-group)]
gi|49388105|dbj|BAD25238.1| putative vesicle-associated
membrane protein-associated protein [Oryza sativa
(japonica cultivar-group)]
Length = 259
Score = 71.6 bits (174), Expect = 5e-12
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA EAPPDMQCKDKFL+QS + T KDIT DMF K+SG V E K + V P P
Sbjct: 107 MQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKVVYTQPHP 166
Query: 61 SPNPPLSVHASESLDQVSF 79
+ L+ + E L +S+
Sbjct: 167 T---SLNGGSEEGLGSLSY 182
>emb|CAB80775.1| putative proline-rich protein [Arabidopsis thaliana]
gi|3193330|gb|AAC19312.1| contains similarity to
Medicago sativa corC (GB:L22305) [Arabidopsis thaliana]
gi|7486542|pir||T01345 hypothetical protein F6N15.21 -
Arabidopsis thaliana
Length = 399
Score = 70.1 bits (170), Expect = 1e-11
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCV-APP 59
MQA +EAP DMQCKDKFL+Q++V G T+K++ ++MF K++G +++ K R V + A P
Sbjct: 84 MQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANP 143
Query: 60 PSPNP 64
PSP P
Sbjct: 144 PSPVP 148
>gb|AAM64824.1| putative proline-rich protein [Arabidopsis thaliana]
Length = 239
Score = 70.1 bits (170), Expect = 1e-11
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCV-APP 59
MQA +EAP DMQCKDKFL+Q++V G T+K++ ++MF K++G +++ K R V + A P
Sbjct: 72 MQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANP 131
Query: 60 PSPNP 64
PSP P
Sbjct: 132 PSPVP 136
>ref|NP_567153.1| vesicle-associated membrane family protein / VAMP family protein
[Arabidopsis thaliana] gi|25054852|gb|AAN71916.1|
putative proline-rich protein [Arabidopsis thaliana]
Length = 239
Score = 70.1 bits (170), Expect = 1e-11
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCV-APP 59
MQA +EAP DMQCKDKFL+Q++V G T+K++ ++MF K++G +++ K R V + A P
Sbjct: 72 MQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIPANP 131
Query: 60 PSPNP 64
PSP P
Sbjct: 132 PSPVP 136
>ref|NP_172359.2| vesicle-associated membrane family protein / VAMP family protein
[Arabidopsis thaliana]
Length = 386
Score = 67.0 bits (162), Expect = 1e-10
Identities = 34/67 (50%), Positives = 42/67 (61%), Gaps = 2/67 (2%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +E PPDM CKDKFL+QS T +DIT+ MF K G ++E+K R V PP
Sbjct: 70 MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTLV--PP 127
Query: 61 SPNPPLS 67
S +P LS
Sbjct: 128 SDSPELS 134
>gb|AAF99771.1| F22O13.31 [Arabidopsis thaliana] gi|25407055|pir||B86220 protein
F22O13.31 [imported] - Arabidopsis thaliana
Length = 432
Score = 67.0 bits (162), Expect = 1e-10
Identities = 34/67 (50%), Positives = 42/67 (61%), Gaps = 2/67 (2%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +E PPDM CKDKFL+QS T +DIT+ MF K G ++E+K R V PP
Sbjct: 70 MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTLV--PP 127
Query: 61 SPNPPLS 67
S +P LS
Sbjct: 128 SDSPELS 134
>pir||T00738 hypothetical protein F22O13.33 - Arabidopsis thaliana
Length = 441
Score = 67.0 bits (162), Expect = 1e-10
Identities = 34/67 (50%), Positives = 42/67 (61%), Gaps = 2/67 (2%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPPP 60
MQA +E PPDM CKDKFL+QS T +DIT+ MF K G ++E+K R V PP
Sbjct: 70 MQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTLV--PP 127
Query: 61 SPNPPLS 67
S +P LS
Sbjct: 128 SDSPELS 134
>gb|AAP54536.1| putative vesicle-associated membrane protein [Oryza sativa
(japonica cultivar-group)] gi|37535894|ref|NP_922249.1|
putative vesicle-associated membrane protein [Oryza
sativa (japonica cultivar-group)]
gi|22324961|gb|AAM95688.1| putative vesicle-associated
membrane protein [Oryza sativa (japonica
cultivar-group)]
Length = 275
Score = 65.9 bits (159), Expect = 3e-10
Identities = 32/59 (54%), Positives = 39/59 (65%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCVAPP 59
MQA APPD+QCKDKFL+QS+V G + KDITS MF +D V+E K + V PP
Sbjct: 72 MQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLKVSYVMPP 130
>gb|AAC63657.1| unknown protein [Arabidopsis thaliana] gi|25412162|pir||E84629
hypothetical protein At2g23830 [imported] - Arabidopsis
thaliana gi|15224067|ref|NP_179963.1| vesicle-associated
membrane protein, putative / VAMP, putative [Arabidopsis
thaliana]
Length = 149
Score = 63.2 bits (152), Expect = 2e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 1 MQALEEAPPDMQCKDKFLLQSIVARPGATTKDITSDMFYKDSGYEVKESKFRAVCV 56
MQA +E P DMQ +KF++QS++A PG T K++T +MF K+SG+ V+E+K R V
Sbjct: 71 MQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKLRVTYV 126
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,191,593
Number of Sequences: 2540612
Number of extensions: 5194065
Number of successful extensions: 24661
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 24620
Number of HSP's gapped (non-prelim): 65
length of query: 83
length of database: 863,360,394
effective HSP length: 59
effective length of query: 24
effective length of database: 713,464,286
effective search space: 17123142864
effective search space used: 17123142864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC121238.7