BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121237.3 - phase: 1
(455 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis... 642 0.0
gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa] 636 0.0
emb|CAB71079.1| putative protein [Arabidopsis thaliana] gi|42572... 634 e-180
emb|CAB79305.1| putative protein [Arabidopsis thaliana] gi|34510... 603 e-171
gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]... 599 e-170
ref|NP_179968.2| glycoside hydrolase family 28 protein / polygal... 599 e-170
ref|XP_550458.1| putative polygalacturonase [Oryza sativa (japon... 572 e-162
ref|NP_910226.1| ESTs AU029388(E30287),D49277(S16474) correspond... 572 e-162
ref|XP_470318.1| putative polygalacturonase [Oryza sativa (japon... 446 e-124
gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gi|1176213... 438 e-121
emb|CAB71871.1| putative protein [Arabidopsis thaliana] gi|11263... 434 e-120
emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana... 421 e-116
ref|XP_477242.1| putative polygalacturonase [Oryza sativa (japon... 411 e-113
gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]... 402 e-110
ref|NP_917710.1| putative polygalacturonase [Oryza sativa (japon... 402 e-110
dbj|BAD27952.1| putative polygalacturonase [Oryza sativa (japoni... 400 e-110
ref|XP_479704.1| putative exo-poly-alpha-D-galacturonosidase pre... 399 e-109
dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thal... 389 e-107
ref|XP_475982.1| putative polygalacturonase [Oryza sativa (japon... 382 e-104
gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana] 377 e-103
>emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28
protein [Arabidopsis thaliana]
gi|15229058|ref|NP_190464.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana] gi|11357281|pir||T46135
endo-polygalacturonase-like protein - Arabidopsis
thaliana
Length = 469
Score = 642 bits (1657), Expect = 0.0
Identities = 302/454 (66%), Positives = 371/454 (81%), Gaps = 6/454 (1%)
Query: 1 VILGTLAECRIPSISKLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQ 60
+ L E R S + ++ A+NCRKHSA+LTDFG VGDGKT NTKAF +AI+ LSQ
Sbjct: 14 IFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAISKLSQ 73
Query: 61 YANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGRE 120
A DGGAQL+VPPGKWLTGSFNLTSHFTLF+Q+ A ILASQ ES+WP + LPSYG+GR+
Sbjct: 74 MATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPSYGKGRD 133
Query: 121 KPG-GRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQI 179
G GRF+SLI GTNL DV+ITGNNGTI+GQG WWDKF+KKQ KITRPY+IEI++S I
Sbjct: 134 GTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEILFSKNI 193
Query: 180 QISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSG 239
QISN+TL++SPSW +HPVY +++I+ +T+LAPV VPNTDGI+PDS TN LIED YIVSG
Sbjct: 194 QISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSG 253
Query: 240 DDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAI 299
DDCIA+KSGWD+YGIK G P+Q + +RRLTCISPKSA VALGSEMSGGI+DVRIEDVT
Sbjct: 254 DDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIEDVTLT 313
Query: 300 NTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGI 359
NTESA+RIK+AVGRGA+VKDI+ + + + T+KYVFWM+G+YG HPD GFDP ALP+I+ I
Sbjct: 314 NTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALPEITNI 373
Query: 360 NYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPK 419
NYRD+TA+NVT++ ++GI DPFTGIC+SNVTI ++A KK+ WNCTD++GVTS V P+
Sbjct: 374 NYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTSRVTPE 433
Query: 420 PCELLKEKE-----IECPFPRDKLPIENVQFKTC 448
PC LL EK+ ++C FP D +PIE+V K C
Sbjct: 434 PCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 467
>gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 636 bits (1640), Expect = 0.0
Identities = 298/443 (67%), Positives = 361/443 (81%), Gaps = 4/443 (0%)
Query: 16 KLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGK 75
K +F+Y A+NCR HSA LT+FGGVGDGKT NTKAF +AI+ LSQYA DGGAQL VP GK
Sbjct: 32 KFESFEYSAMNCRAHSASLTEFGGVGDGKTSNTKAFQTAISKLSQYATDGGAQLFVPAGK 91
Query: 76 WLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNL 135
WLTGSF+LTSHFTL+L KD+V+LASQ ++WP L ALPSYGRGR+ GR+SSLIFGTNL
Sbjct: 92 WLTGSFSLTSHFTLYLHKDSVLLASQDLNEWPVLKALPSYGRGRDAAAGRYSSLIFGTNL 151
Query: 136 IDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVH 195
DVI+TG NGTIDGQG WW +F KK+LK TRPY+IEIM+S IQISNLTL+NSPSW VH
Sbjct: 152 TDVIVTGENGTIDGQGEFWWQQFHKKKLKYTRPYLIEIMFSSDIQISNLTLLNSPSWNVH 211
Query: 196 PVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIK 255
PVYSSNII+ G+TI+AP+ PNTDGI+PDS TN IED YIVSGDDC+A+KSGWDEYGI
Sbjct: 212 PVYSSNIIVQGITIIAPISSPNTDGINPDSCTNTKIEDCYIVSGDDCVAVKSGWDEYGIS 271
Query: 256 VGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGA 315
G P++ +++RRLTCISP SA +ALGSEMSGGIQDVR ED+ AINTESAVRIK+AVGRGA
Sbjct: 272 FGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGA 331
Query: 316 FVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKV 375
+VKDI+V+ M L+T+K+ FWMTG+YG H D +D NA P+I+GINYRDV A+NVT+A ++
Sbjct: 332 YVKDIYVRRMTLHTMKWAFWMTGNYGSHADGNYDKNAFPEITGINYRDVVAENVTMAARL 391
Query: 376 EGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKEIE----C 431
EGI++ PFTGIC+SNVTI ++ KK PW CTDI G+TS V P PC LL ++ + C
Sbjct: 392 EGIADHPFTGICMSNVTIGLAKKAKKQPWTCTDIQGITSGVTPTPCGLLPDQGTDKPGGC 451
Query: 432 PFPRDKLPIENVQFKTCNFQSSV 454
FP D +PI+ V+ K C + S+V
Sbjct: 452 DFPTDDIPIDTVEIKKCTYTSNV 474
>emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana]
gi|15233124|ref|NP_191708.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana] gi|11357717|pir||T47941
hypothetical protein F2A19.90 - Arabidopsis thaliana
Length = 476
Score = 634 bits (1634), Expect = e-180
Identities = 300/444 (67%), Positives = 368/444 (82%), Gaps = 10/444 (2%)
Query: 20 FDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTG 79
F+Y AI CR HSA +T++GGVGDGKTLNTKAF SA+ +LSQY+++GGAQL VP GKWLTG
Sbjct: 33 FEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPAGKWLTG 92
Query: 80 SFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVI 139
SFNLTSHFTLFL KDA++LA+Q +++P L ALPSYGRGR+ GGRF+SLIFGTNL DVI
Sbjct: 93 SFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGTNLSDVI 152
Query: 140 ITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYS 199
ITGNNGTIDGQGS WW KF +LK TRPY+IE+M+SD IQISNLT ++SPSW +HPVYS
Sbjct: 153 ITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYS 212
Query: 200 SNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKP 259
SNII+ G+TI+APV PNTDGI+PDS TN IED YI+SGDDCIA+KSGWDEYGI G P
Sbjct: 213 SNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMP 272
Query: 260 SQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKD 319
++++++RRLTCISP SA +ALGSEMSGGI+DVR ED+TA TES VRIK+AVGRGAFVK+
Sbjct: 273 TKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKN 332
Query: 320 IFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGIS 379
I+VKGM+L+T+K+VFWMTG+Y H D+ +DP+ALP+I+GINYRD+ A+NV++AG++EGIS
Sbjct: 333 IYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGIS 392
Query: 380 NDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKEIE--------- 430
DPFTGIC+SN TI M+A KK W C+D+ GVTS V PKPC+LL +E E
Sbjct: 393 GDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTKKKMIDG 452
Query: 431 -CPFPRDKLPIENVQFKTCNFQSS 453
C FP D L I+NV+ KTC++Q S
Sbjct: 453 GCDFPTDVLEIDNVELKTCSYQMS 476
>emb|CAB79305.1| putative protein [Arabidopsis thaliana] gi|3451075|emb|CAA20471.1|
putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis
thaliana] gi|62320484|dbj|BAD95012.1| hypothetical
protein [Arabidopsis thaliana]
gi|15236514|ref|NP_194081.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana] gi|7485556|pir||T05388
hypothetical protein F16G20.200 - Arabidopsis thaliana
Length = 495
Score = 603 bits (1556), Expect = e-171
Identities = 281/433 (64%), Positives = 349/433 (79%), Gaps = 4/433 (0%)
Query: 20 FDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTG 79
F+Y AI+CR +SA L +FG VGDG T NT AF A++ LS++A+ GG+ L VP G+WLTG
Sbjct: 56 FEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTG 115
Query: 80 SFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVI 139
+FNLTSHFTLFL +DAVILASQ ESD+ + LPSYGRGR+ GGRF SL+FG+NL DV+
Sbjct: 116 NFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 175
Query: 140 ITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYS 199
ITG NGTIDGQG WW KF++ +LK TRPY+IEIM+SD IQISNLT +NSPSW +HPVYS
Sbjct: 176 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 235
Query: 200 SNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKP 259
SNI I GLTILAPV VPNTDGI+PDS TN IED YIVSGDDCIA+KSGWD+YGI G P
Sbjct: 236 SNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMP 295
Query: 260 SQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKD 319
++ +++RRLTCISP SA++ALGSEMSGGI+DVR ED+ AIN+ES +RIK+A+GRG +VKD
Sbjct: 296 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKD 355
Query: 320 IFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGIS 379
++V+GM + T+KYVFWMTGSYG HPD+ +DP ALP I INY+D+ A+NVT+ ++ GIS
Sbjct: 356 VYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 415
Query: 380 NDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKE----IECPFPR 435
D FTGIC+SNVTI +S KK+ WNCTD+SG TS V P+PC+LL EK+ + C FP
Sbjct: 416 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 475
Query: 436 DKLPIENVQFKTC 448
D +PI+ V+ + C
Sbjct: 476 DPIPIDEVKLQRC 488
>gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
gi|25412169|pir||B84630 probable polygalacturonase
[imported] - Arabidopsis thaliana
Length = 466
Score = 599 bits (1545), Expect = e-170
Identities = 282/448 (62%), Positives = 354/448 (78%), Gaps = 3/448 (0%)
Query: 5 TLAECRIPSISKLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYAND 64
++ E R + N +Y A+NCRKH+AVLT+FG VGDGKT NTKAF AIT L+ A D
Sbjct: 18 SMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAAD 77
Query: 65 GGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGG 124
GG QLIVPPGKWLTGSFNLTSHFTLF+QK A ILASQ ES++P + LPSYG+GR+ G
Sbjct: 78 GGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPSYGQGRDAAGP 137
Query: 125 RFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLK-ITRPYMIEIMYSDQIQISN 183
F+SLI GTNL DV+ITGNNGTI+GQG WW K++ K ITRPY IEI++S +QISN
Sbjct: 138 TFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEIIFSQNVQISN 197
Query: 184 LTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCI 243
+T+++SP+W +HPVY +N+I+ G+TILAP+D PNTDGI+PDS TN LIED Y+VSGDDCI
Sbjct: 198 ITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCI 257
Query: 244 AIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTES 303
A+KSGWD++GIKVG P+Q + +RRLTCISP SA +ALGSEMSGGI+DVRIED+T + T+S
Sbjct: 258 AVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQS 317
Query: 304 AVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRD 363
A+RIK+AVGRG +VKDIF + + T+KYVFWM+G+Y HP +GFDP A+P I+ INYRD
Sbjct: 318 AIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRD 377
Query: 364 VTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCEL 423
+TA NVT +++G NDPFT IC+SN+ I+++A KKL WNCT ISGV+S V PKPC L
Sbjct: 378 MTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSL 437
Query: 424 LKEK--EIECPFPRDKLPIENVQFKTCN 449
L EK ++C FP DK+PIE+V C+
Sbjct: 438 LPEKGAPVDCAFPVDKIPIESVVLNKCS 465
>ref|NP_179968.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 477
Score = 599 bits (1545), Expect = e-170
Identities = 282/448 (62%), Positives = 354/448 (78%), Gaps = 3/448 (0%)
Query: 5 TLAECRIPSISKLNNFDYPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYAND 64
++ E R + N +Y A+NCRKH+AVLT+FG VGDGKT NTKAF AIT L+ A D
Sbjct: 29 SMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEAITKLAPKAAD 88
Query: 65 GGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGG 124
GG QLIVPPGKWLTGSFNLTSHFTLF+QK A ILASQ ES++P + LPSYG+GR+ G
Sbjct: 89 GGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPSYGQGRDAAGP 148
Query: 125 RFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLK-ITRPYMIEIMYSDQIQISN 183
F+SLI GTNL DV+ITGNNGTI+GQG WW K++ K ITRPY IEI++S +QISN
Sbjct: 149 TFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEIIFSQNVQISN 208
Query: 184 LTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCI 243
+T+++SP+W +HPVY +N+I+ G+TILAP+D PNTDGI+PDS TN LIED Y+VSGDDCI
Sbjct: 209 ITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCI 268
Query: 244 AIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTES 303
A+KSGWD++GIKVG P+Q + +RRLTCISP SA +ALGSEMSGGI+DVRIED+T + T+S
Sbjct: 269 AVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQS 328
Query: 304 AVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRD 363
A+RIK+AVGRG +VKDIF + + T+KYVFWM+G+Y HP +GFDP A+P I+ INYRD
Sbjct: 329 AIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRD 388
Query: 364 VTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCEL 423
+TA NVT +++G NDPFT IC+SN+ I+++A KKL WNCT ISGV+S V PKPC L
Sbjct: 389 MTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVSSKVTPKPCSL 448
Query: 424 LKEK--EIECPFPRDKLPIENVQFKTCN 449
L EK ++C FP DK+PIE+V C+
Sbjct: 449 LPEKGAPVDCAFPVDKIPIESVVLNKCS 476
>ref|XP_550458.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|55295844|dbj|BAD67712.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 485
Score = 572 bits (1475), Expect = e-162
Identities = 273/433 (63%), Positives = 340/433 (78%), Gaps = 5/433 (1%)
Query: 22 YPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGG--AQLIVPPGKWLTG 79
Y A +CR H+A LTDFGGVGDG T NT AF SA+ +LSQY+ +GG A L VP GKWLTG
Sbjct: 48 YLAPSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTG 107
Query: 80 SFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVI 139
FNLTSHFTLFL DAVIL SQ +WP + LPSYGRGR+K GGR++SLI G+NL DV+
Sbjct: 108 PFNLTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVV 167
Query: 140 ITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYS 199
ITG NGTIDGQG+ WW KF +LK TR Y+IE+M+SD + ISN+TLVNSP+W +HPVYS
Sbjct: 168 ITGANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYS 227
Query: 200 SNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKP 259
SNI++ G+TILAP PNTDGI+PDS ++V IED YIVSGDDC+AIKSGWDEYGI G P
Sbjct: 228 SNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMP 287
Query: 260 SQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKD 319
SQ+I+VRRLTC+SP SA++ALGSEMSGGI DVR ED+TA+N+ESAVRIK+AVGRGA+V+D
Sbjct: 288 SQHIVVRRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRD 347
Query: 320 IFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNV-TIAGKVEGI 378
+FV+GM L+T+K+VFWMTG+Y HPD+G+DPNA+P + I+Y+DV A V A ++EGI
Sbjct: 348 VFVRGMSLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGI 407
Query: 379 SNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLK-EKEIECPFPRDK 437
PF GIC++NVT +S +K PW CTDI GV++ V P PC+ L+ + CPFP D
Sbjct: 408 QGAPFRGICIANVTATLS-KSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHDGACPFPTDT 466
Query: 438 LPIENVQFKTCNF 450
LPI+ + + C +
Sbjct: 467 LPIDQLVMQQCAY 479
>ref|NP_910226.1| ESTs AU029388(E30287),D49277(S16474) correspond to a region of the
predicted gene.~Similar to Arabidopsis thaliana DNA
chromosome 4, BAC clone F16G20, picA protein. (AL031326)
[Oryza sativa (japonica cultivar-group)]
Length = 477
Score = 572 bits (1475), Expect = e-162
Identities = 273/433 (63%), Positives = 340/433 (78%), Gaps = 5/433 (1%)
Query: 22 YPAINCRKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGG--AQLIVPPGKWLTG 79
Y A +CR H+A LTDFGGVGDG T NT AF SA+ +LSQY+ +GG A L VP GKWLTG
Sbjct: 40 YLAPSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTG 99
Query: 80 SFNLTSHFTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVI 139
FNLTSHFTLFL DAVIL SQ +WP + LPSYGRGR+K GGR++SLI G+NL DV+
Sbjct: 100 PFNLTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVV 159
Query: 140 ITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYS 199
ITG NGTIDGQG+ WW KF +LK TR Y+IE+M+SD + ISN+TLVNSP+W +HPVYS
Sbjct: 160 ITGANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYS 219
Query: 200 SNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKP 259
SNI++ G+TILAP PNTDGI+PDS ++V IED YIVSGDDC+AIKSGWDEYGI G P
Sbjct: 220 SNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMP 279
Query: 260 SQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKD 319
SQ+I+VRRLTC+SP SA++ALGSEMSGGI DVR ED+TA+N+ESAVRIK+AVGRGA+V+D
Sbjct: 280 SQHIVVRRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRD 339
Query: 320 IFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNV-TIAGKVEGI 378
+FV+GM L+T+K+VFWMTG+Y HPD+G+DPNA+P + I+Y+DV A V A ++EGI
Sbjct: 340 VFVRGMSLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGI 399
Query: 379 SNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLK-EKEIECPFPRDK 437
PF GIC++NVT +S +K PW CTDI GV++ V P PC+ L+ + CPFP D
Sbjct: 400 QGAPFRGICIANVTATLS-KSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHDGACPFPTDT 458
Query: 438 LPIENVQFKTCNF 450
LPI+ + + C +
Sbjct: 459 LPIDQLVMQQCAY 471
>ref|XP_470318.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|40714685|gb|AAR88591.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 476
Score = 446 bits (1147), Expect = e-124
Identities = 215/399 (53%), Positives = 282/399 (69%), Gaps = 5/399 (1%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R HS +T+FG VGDG TLNTKAF +AI L+ +A+ GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TL L KDA I+ S SDWP + LPSYGRGRE PG R SLIFGTNL DVIITG NGTI
Sbjct: 99 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 158
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG+ WWD F L TRP+++E+MYS + ISNLT NSP W +HPVY S +++ +
Sbjct: 159 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
TILAP++ PNTDGIDPDSSTNV I+ Y+ +GDD I IKSGWDEYGI +PS NI +
Sbjct: 219 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 278
Query: 268 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 327
+T + A +A GSEMSGGI +VR E + +N+ +RIK+A GRG +VK++++ + +
Sbjct: 279 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 338
Query: 328 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 387
+ + +TG++G+HPD+ +D NALP IS I +V NV +AG +EGI D F+ IC
Sbjct: 339 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 398
Query: 388 VSNVTIEM-SAHKKKLPWNCTDISGVTSNVVPKPCELLK 425
+SNV++ + S H PWNC+ I G +++V+P+ CE L+
Sbjct: 399 LSNVSLSVQSMH----PWNCSLIEGYSNSVIPESCEQLR 433
>gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gi|11762132|gb|AAG40344.1|
AT3g62110 [Arabidopsis thaliana]
gi|18412253|ref|NP_567126.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana]
Length = 471
Score = 438 bits (1127), Expect = e-121
Identities = 204/400 (51%), Positives = 280/400 (70%), Gaps = 1/400 (0%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R HS +T+FG VGDG TLNTKAF +A+ L+ +++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TL+L K A IL S +WP + LPSYGRGRE PG R SLI+G NL DV+ITG NGTI
Sbjct: 99 TLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 158
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG+ WWD F+ +L TRP+++E+M S + ISNLT +NSP W +HPVY ++++ L
Sbjct: 159 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 218
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
TILAP++ PNTDG+DPDSSTNV IED YIV+GDD ++IKSGWDEYGI +PS I + R
Sbjct: 219 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 278
Query: 268 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 327
LT + S+ +A+GSEMSGG+ ++ I+D+ N+ + +RIK++ GRG +V+++ + + L
Sbjct: 279 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKL 338
Query: 328 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 387
+ +K TG YG+HPD +DP ALP I I + +V + +AG +EGI D F IC
Sbjct: 339 DNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNIC 398
Query: 388 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPK-PCELLKE 426
NVT+ + + KK PW C+++ G + V P+ C+ LKE
Sbjct: 399 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKE 438
>emb|CAB71871.1| putative protein [Arabidopsis thaliana] gi|11263971|pir||T48003
hypothetical protein T17J13.70 - Arabidopsis thaliana
Length = 470
Score = 434 bits (1116), Expect = e-120
Identities = 204/400 (51%), Positives = 281/400 (70%), Gaps = 2/400 (0%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R HS +T+FG VGDG TLNTKAF +A+ L+ +++ GGA+L VP G+WLTGSF+L SH
Sbjct: 39 RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHL 98
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TL+L K A IL S ++ WP + LPSYGRGRE PG R SLI+G NL DV+ITG NGTI
Sbjct: 99 TLWLDKGATILGSTAKN-WPVVDPLPSYGRGRELPGRRHRSLIYGQNLTDVVITGENGTI 157
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG+ WWD F+ +L TRP+++E+M S + ISNLT +NSP W +HPVY ++++ L
Sbjct: 158 DGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKNL 217
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
TILAP++ PNTDG+DPDSSTNV IED YIV+GDD ++IKSGWDEYGI +PS I + R
Sbjct: 218 TILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKINR 277
Query: 268 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 327
LT + S+ +A+GSEMSGG+ ++ I+D+ N+ + +RIK++ GRG +V+++ + + L
Sbjct: 278 LTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVKL 337
Query: 328 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 387
+ +K TG YG+HPD +DP ALP I I + +V + +AG +EGI D F IC
Sbjct: 338 DNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNIC 397
Query: 388 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPK-PCELLKE 426
NVT+ + + KK PW C+++ G + V P+ C+ LKE
Sbjct: 398 FLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLKE 437
>emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase
[Arabidopsis thaliana] gi|22136230|gb|AAM91193.1|
putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase
[Arabidopsis thaliana] gi|15236625|ref|NP_194113.1|
glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein
[Arabidopsis thaliana] gi|7486746|pir||T05614
hypothetical protein F9D16.290 - Arabidopsis thaliana
Length = 444
Score = 421 bits (1083), Expect = e-116
Identities = 206/392 (52%), Positives = 270/392 (68%), Gaps = 2/392 (0%)
Query: 34 LTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 93
+TDFGGVGDG+T+NTKAF +AI + GG L +PPG +LT SFNLTSH TL+L K
Sbjct: 43 ITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAK 102
Query: 94 DAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGST 153
AVI A Q +WP + LPSYGRGRE PGGR+ S I G L DV+ITG NGTIDGQG
Sbjct: 103 GAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEV 162
Query: 154 WWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPV 213
WW+ ++ + LK TRP +IE S +I ISN+ NSP W +HPVY SN++I+ +TILAP
Sbjct: 163 WWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQ 222
Query: 214 DVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISP 273
D PNTDGIDPDSS NV IED+YI +GDD +AIKSGWD+YGI G+PS NI +RR+T SP
Sbjct: 223 DSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP 282
Query: 274 KSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYV 333
A +A+GSE SGGI+++ E +T N V IK+ +GRG ++K+I + + ++T KY
Sbjct: 283 -FAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYG 341
Query: 334 FWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTI 393
+ G GDHPD ++PNALP + GI+ ++V NV AG ++G+ PFTGIC+S + +
Sbjct: 342 IKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINL 401
Query: 394 EMSAHKKKLPWNCTDISGVTSNVVPKPCELLK 425
S + K W C+D+SG + V P PC L+
Sbjct: 402 HGSLNSYK-TWKCSDVSGTSLKVSPWPCSELR 432
>ref|XP_477242.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 446
Score = 411 bits (1056), Expect = e-113
Identities = 199/374 (53%), Positives = 260/374 (69%), Gaps = 3/374 (0%)
Query: 52 NSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILASQYESDWPQLPA 111
N ++ + N GGA+L VP G+WLTGSFNL SH T+ L DAVI+ SQ SDWP +
Sbjct: 33 NDLTASVHRPHNKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDP 92
Query: 112 LPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMI 171
LPSYGRGRE PG R SLIFG+NL DVIITG NGTIDGQG WW+ F L TRP ++
Sbjct: 93 LPSYGRGRELPGKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLL 152
Query: 172 EIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLI 231
E+MYSD++ ISNLT +N+P W +HPVY S +++ LTILAP+ PNTDGIDPDSS+NV I
Sbjct: 153 ELMYSDRVVISNLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCI 212
Query: 232 EDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDV 291
ED YI +GDD + IKSGWDEYGI PS NI +R +T + SA +A GSEMSGGI DV
Sbjct: 213 EDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDV 272
Query: 292 RIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPN 351
R E + IN+ +RIK+A GRG +VK+I++ + ++ + +TG+YG+HPD+ +D N
Sbjct: 273 RAEGLRFINSVHGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKN 332
Query: 352 ALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISG 411
ALP IS I ++V N+ AG + GI D F+ IC+SNV++ + K PWNC+ I G
Sbjct: 333 ALPVISNITIKNVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSLIEG 389
Query: 412 VTSNVVPKPCELLK 425
+++V P+ CE L+
Sbjct: 390 FSNSVAPEICEQLR 403
>gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase
[Arabidopsis thaliana] gi|22329119|ref|NP_195070.2|
glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein
[Arabidopsis thaliana]
Length = 475
Score = 402 bits (1033), Expect = e-110
Identities = 197/395 (49%), Positives = 269/395 (67%), Gaps = 2/395 (0%)
Query: 34 LTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 93
+TDFGGVGDGKT NT AF A+ +L +A +GGAQL VP G WL+GSFNLTS+FTLFL++
Sbjct: 74 ITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLER 133
Query: 94 DAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGST 153
A+IL S+ +WP + LPSYGRGRE+PGGR SLI G NL +V+ITG NGTIDGQG
Sbjct: 134 GALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKM 193
Query: 154 WWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPV 213
WW+ + + L TR ++IE+ S I ISNLTL+NSP W +HPVY SN++I +TILAP+
Sbjct: 194 WWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPM 253
Query: 214 DVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISP 273
+ PNTDGIDPDSSTNV IED YI SGDD +A+KSGWD+YG+ V +PS NI++RR++ +
Sbjct: 254 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTR 313
Query: 274 KSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYV 333
+ V +GSEMSGGI ++ +ED+ ++ + +RIK+ GRG ++ +I + L +K
Sbjct: 314 TCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVP 373
Query: 334 FWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTI 393
+ DH D+ +DP ALP++ GI +V + N A + G+ F +C+ NVT+
Sbjct: 374 IRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTL 433
Query: 394 EMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKE 428
+K W C D+SG S+V P C L +K+
Sbjct: 434 LGLPKTEK--WKCKDVSGYASDVFPLSCPQLLQKK 466
>ref|NP_917710.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
Length = 446
Score = 402 bits (1032), Expect = e-110
Identities = 193/385 (50%), Positives = 265/385 (68%), Gaps = 4/385 (1%)
Query: 38 GGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVI 97
GG GDG+TL+T AF +A+ ++ + GGA L VPPG WLTG FNLTSH TLFL + AVI
Sbjct: 49 GGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVI 108
Query: 98 LASQYE-SDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWD 156
A+Q + S WP + LPSYGRGRE PGGR+ SLI G L DV+ITG+NGTIDGQGS WWD
Sbjct: 109 RATQQDTSSWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWD 168
Query: 157 KFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVP 216
++K L TRP+++E+M S + +SN+ +SP W +HPVY SN++I +T+LAP D P
Sbjct: 169 MWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSP 228
Query: 217 NTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSA 276
NTDGIDPDSS+NV IED YI +GDD IAIKSGWDEYG+ G+PS +I +RR+T SP +
Sbjct: 229 NTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAG 288
Query: 277 LVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWM 336
A+GSE SGG++ V E + ++ + IK+ GRG F++++ V + L++++Y +
Sbjct: 289 F-AVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRI 347
Query: 337 TGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMS 396
G G HPD+ +D NALP + G+ ++V +N+ AG ++GI+ F+ IC+SNV +
Sbjct: 348 AGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGG 407
Query: 397 AHKKKLPWNCTDISGVTSNVVPKPC 421
A + PW C +SG +V P PC
Sbjct: 408 AAVR--PWKCEAVSGAALDVQPSPC 430
>dbj|BAD27952.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 443
Score = 400 bits (1028), Expect = e-110
Identities = 189/394 (47%), Positives = 259/394 (64%), Gaps = 3/394 (0%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R + + +FGGVGDG+T+NT AF+ A+ + GG L+VP G WLTGSFNLTSH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TLFL + AV+ A+Q WP LPSYGRGRE PG R++S I G L D++ITG+ G I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGII 158
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG WW+ ++++ L+ TRP ++E M+S I ISN+ L NSP W +HPVY N++I +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
I+AP D PNTDG+DPDSSTNV IED+YI +GDD +AIKSGWDEYGI G+PS I +RR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 268 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 327
+ SP S +A+GSE SGG+ +V +ED + N+ + IK+ +GRG F+++I V + +
Sbjct: 279 VRGSSPFSG-IAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 328 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 387
N+++ + G GDHPD F ALP + ++ ++V NV G +EGI N PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 388 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC 421
++NV ++ + W C D+ G V P PC
Sbjct: 398 LANV--KLFGWRNNAAWKCRDVHGAALGVQPGPC 429
>ref|XP_479704.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
(japonica cultivar-group)] gi|42408232|dbj|BAD09389.1|
putative exo-poly-alpha-D-galacturonosidase precursor
[Oryza sativa (japonica cultivar-group)]
Length = 482
Score = 399 bits (1024), Expect = e-109
Identities = 200/395 (50%), Positives = 264/395 (66%), Gaps = 2/395 (0%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R SA + +FG VGDG T NT AF A+ L A GGA+L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TLFL A+IL SQ +WP + LPSYGRGRE+ G R SLI G L DV+ITGNNGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG WWD + + L TR ++IE++ S I ISN+TL NSP W VHPVY N++I L
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
T+LAP++ PNTDGIDPDSS+ V IED YI SGDD +A+KSGWD+YGI VGKPS NII++R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 268 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 327
++ +P + V GSEMSGGI +V I D+ N+ AVRIK+ VGRG ++ +I ++ + +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 328 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 387
+K + DH D+ +D +ALPKIS + RDV ++ A +E + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 388 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCE 422
NV+ ++ K++ W+C + G +V+P PCE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis
thaliana] gi|15238207|ref|NP_199002.1| glycoside
hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 389 bits (1000), Expect = e-107
Identities = 198/395 (50%), Positives = 261/395 (65%), Gaps = 4/395 (1%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDG-GAQLIVPPGKWLTGSFNLTSH 86
R ++DFG VGDGKTLNTKAFNSAI + N G L VP G +LT SFNLTSH
Sbjct: 41 RNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSH 100
Query: 87 FTLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGT 146
TL+L AVI A Q WP LPSYGRGRE PG R+ S I G L DV+ITG NGT
Sbjct: 101 MTLYLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 147 IDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIING 206
IDGQG WW+ ++ LK TRP +IE S I +S++ L NSP W +HPVY SN++++
Sbjct: 161 IDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHH 220
Query: 207 LTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVR 266
+TILAP D NTDGIDPDSS+NV IED+YI +GDD +A+KSGWDEYGI +PS++I +R
Sbjct: 221 VTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIR 280
Query: 267 RLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMD 326
R+T SP A +A+GSE SGGIQ+V +E++T N+ + IK+ +GRG ++ I + G+
Sbjct: 281 RITGSSP-FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 327 LNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGI 386
L ++ ++G GDHPD+ F+ +ALP + GI ++V V AG V+G+ + PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 387 CVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC 421
C SNVT ++ K+ W C+D+ G V P PC
Sbjct: 400 CFSNVT--LTGTKRSPIWKCSDVVGAADKVNPTPC 432
>ref|XP_475982.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|48475087|gb|AAT44156.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 474
Score = 382 bits (982), Expect = e-104
Identities = 196/423 (46%), Positives = 260/423 (61%), Gaps = 30/423 (7%)
Query: 34 LTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 93
+ FGGVGDG+ LNT AF A+ + + GGA L VP G WLTG FNLTSH TLFL +
Sbjct: 50 VASFGGVGDGRALNTAAFARAVARIERRRARGGALLYVPAGVWLTGPFNLTSHMTLFLAR 109
Query: 94 DAVILASQY--------------------------ESDWPQLPALPSYGRGREKPGGRFS 127
AVI A+Q S WP + LPSYGRGRE PGGR+
Sbjct: 110 GAVIRATQAIAMAMSFFYLQDLSSSSCRAFVLDQDTSSWPLIDPLPSYGRGRELPGGRYM 169
Query: 128 SLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLV 187
SLI G L DV ITG NGTIDGQGS WWD ++K+ L TRP+++E++ S + ISN+
Sbjct: 170 SLIHGDGLQDVFITGENGTIDGQGSVWWDMWRKRTLPFTRPHLLELISSTDVIISNVVFQ 229
Query: 188 NSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKS 247
+SP W +HPVY SN++I +T+LAP D PNTDGIDPDSS+NV IED+YI +GDD I+IKS
Sbjct: 230 DSPFWNIHPVYCSNVVITNVTVLAPHDSPNTDGIDPDSSSNVCIEDSYISTGDDLISIKS 289
Query: 248 GWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRI 307
GWDEYGI G+PS I +RR+T P + A+GSE SGG+++V +E + + +
Sbjct: 290 GWDEYGIAFGRPSSGITIRRITGSGPFAGF-AVGSETSGGVENVHVEHLNFFGMGVGIHV 348
Query: 308 KSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAK 367
K+ GRG F+++I V + LN +Y + G G HPD +DP+ LP + G+ ++V +
Sbjct: 349 KTNSGRGGFIRNITVSEVTLNGARYGLRIAGDVGGHPDASYDPSKLPVVDGVTIKNVWGQ 408
Query: 368 NVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC-ELLKE 426
N+ AG V GI + F+ IC+SNV ++ PW C +SG +V P PC EL
Sbjct: 409 NIRQAGLVRGIRDSVFSRICLSNV--KLYGGDSVGPWKCRAVSGGALDVQPSPCAELTST 466
Query: 427 KEI 429
E+
Sbjct: 467 SEM 469
>gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 377 bits (967), Expect = e-103
Identities = 186/404 (46%), Positives = 260/404 (64%), Gaps = 3/404 (0%)
Query: 28 RKHSAVLTDFGGVGDGKTLNTKAFNSAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 87
R HS + +FG VGDGKTLNT AF +A+ L +A+ GGAQL VPPGKWLTGSFNLTSH
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 88 TLFLQKDAVILASQYESDWPQLPALPSYGRGREKPGGRFSSLIFGTNLIDVIITGNNGTI 147
TLFL+K A ILAS S W + LPSYGRG E PG R+ SLI G NLIDV+ITG NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 148 DGQGSTWWDKFQKKQLKITRPYMIEIMYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGL 207
DGQG+ WW+ + L +RP++IE + S I ISNLT +N+P+ +HPVY S I I +
Sbjct: 154 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 213
Query: 208 TILAPVDVPNTDGIDPDSSTNVLIEDNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRR 267
I VD P+ G+ PDSS NV IED+ I G D +++KSGWD+YGI G+P+ + +R
Sbjct: 214 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 273
Query: 268 LTCISPKSALVALGSEMSGGIQDVRIEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDL 327
L SP A ++ GSEMSGG+ DV +E + ++ V ++ GRG ++++I + +DL
Sbjct: 274 LRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDL 333
Query: 328 NTLKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKVEGISNDPFTGIC 387
++ G G HPD+ FD +ALP ++ I R+ T ++ +AG + GI PFT IC
Sbjct: 334 TSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSIC 393
Query: 388 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLKEKEIEC 431
++++ ++ + + W C+++SG + +V P+PC+ L C
Sbjct: 394 LADIHLQTRSEES---WICSNVSGFSDDVSPEPCQELMSSPSSC 434
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 824,484,207
Number of Sequences: 2540612
Number of extensions: 37653364
Number of successful extensions: 80498
Number of sequences better than 10.0: 517
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 79216
Number of HSP's gapped (non-prelim): 645
length of query: 455
length of database: 863,360,394
effective HSP length: 131
effective length of query: 324
effective length of database: 530,540,222
effective search space: 171895031928
effective search space used: 171895031928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)
Medicago: description of AC121237.3