BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121237.2 - phase: 0
(463 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa] 658 0.0
emb|CAB71079.1| putative protein [Arabidopsis thaliana] gi|42572... 649 0.0
emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis... 647 0.0
gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]... 620 e-176
ref|NP_179968.2| glycoside hydrolase family 28 protein / polygal... 620 e-176
emb|CAB79305.1| putative protein [Arabidopsis thaliana] gi|34510... 610 e-173
ref|XP_550458.1| putative polygalacturonase [Oryza sativa (japon... 587 e-166
ref|NP_910226.1| ESTs AU029388(E30287),D49277(S16474) correspond... 587 e-166
ref|XP_470318.1| putative polygalacturonase [Oryza sativa (japon... 446 e-124
gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gi|1176213... 436 e-121
emb|CAB71871.1| putative protein [Arabidopsis thaliana] gi|11263... 431 e-119
ref|XP_477242.1| putative polygalacturonase [Oryza sativa (japon... 411 e-113
emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana... 406 e-112
gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]... 399 e-109
ref|XP_479704.1| putative exo-poly-alpha-D-galacturonosidase pre... 392 e-107
ref|NP_917710.1| putative polygalacturonase [Oryza sativa (japon... 392 e-107
dbj|BAD27952.1| putative polygalacturonase [Oryza sativa (japoni... 388 e-106
dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thal... 378 e-103
gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana] 373 e-102
gb|AAM91751.1| unknown protein [Arabidopsis thaliana] gi|2025882... 373 e-102
>gb|AAP33475.1| polygalacturonase-like protein [Fragaria x ananassa]
Length = 474
Score = 658 bits (1698), Expect = 0.0
Identities = 308/469 (65%), Positives = 381/469 (80%), Gaps = 7/469 (1%)
Query: 1 VIGVISVVLILGS---LAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTK 57
++ V++++L G + + + + K +F+Y A+NCR HSA LT+FG VGDGKT NTK
Sbjct: 6 IVVVVALILRGGDSRGVTKAKPKAPKKFESFEYSAMNCRAHSASLTEFGGVGDGKTSNTK 65
Query: 58 AFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQL 117
AF AI+ LSQYA DGGAQL VP GKWLTGSF+LTSHFTL+L KD+V+L SQD +EWP L
Sbjct: 66 AFQTAISKLSQYATDGGAQLFVPAGKWLTGSFSLTSHFTLYLHKDSVLLASQDLNEWPVL 125
Query: 118 LVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPY 177
LPSYGRGRDA AGR+SSLIFGTNLTDVI+TG+NGTIDGQG +WW +FHKK+L TRPY
Sbjct: 126 KALPSYGRGRDAAAGRYSSLIFGTNLTDVIVTGENGTIDGQGEFWWQQFHKKKLKYTRPY 185
Query: 178 MIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNV 237
+IEIM+S IQISNLTL+NSP+W VHP+YSSNII+ G+TI+AP+ SPNTDGINPDSCTN
Sbjct: 186 LIEIMFSSDIQISNLTLLNSPSWNVHPVYSSNIIVQGITIIAPISSPNTDGINPDSCTNT 245
Query: 238 RIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQ 297
+IED +IVSGDDC+A+KSGWDEYGI GMP++Q++IRRLTCISP SA +ALGSEMSGGIQ
Sbjct: 246 KIEDCYIVSGDDCVAVKSGWDEYGISFGMPTKQLVIRRLTCISPYSATIALGSEMSGGIQ 305
Query: 298 DVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFD 357
DVR ED+ AINTESA+RIK+AVGRGA+VKDI+V+ M L+TMK+ FWMTG+YG H D +D
Sbjct: 306 DVRAEDIVAINTESAVRIKTAVGRGAYVKDIYVRRMTLHTMKWAFWMTGNYGSHADGNYD 365
Query: 358 PNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDI 417
NA P+I+GINYRDV A+NVT+A +LEGI++ PFTGIC+SNVTI ++ KK PW CTDI
Sbjct: 366 KNAFPEITGINYRDVVAENVTMAARLEGIADHPFTGICMSNVTIGLAKKAKKQPWTCTDI 425
Query: 418 SGVTSNVVPKPCELLQEKEIE----CPFPTDKLAIENVQFKTCNFQSSV 462
G+TS V P PC LL ++ + C FPTD + I+ V+ K C + S+V
Sbjct: 426 QGITSGVTPTPCGLLPDQGTDKPGGCDFPTDDIPIDTVEIKKCTYTSNV 474
>emb|CAB71079.1| putative protein [Arabidopsis thaliana]
gi|42572755|ref|NP_974473.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana]
gi|15233124|ref|NP_191708.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana] gi|11357717|pir||T47941
hypothetical protein F2A19.90 - Arabidopsis thaliana
Length = 476
Score = 649 bits (1675), Expect = 0.0
Identities = 304/450 (67%), Positives = 373/450 (82%), Gaps = 10/450 (2%)
Query: 22 SIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPP 81
S F+Y AI CR HSA +T++G VGDGKTLNTKAF +A+ +LSQY+++GGAQL VP
Sbjct: 27 SQSFETFEYTAIICRSHSASITEYGGVGDGKTLNTKAFQSAVDHLSQYSSEGGAQLFVPA 86
Query: 82 GKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGT 141
GKWLTGSFNLTSHFTLFL KDA++L +QD +E+P L LPSYGRGRDA GRF+SLIFGT
Sbjct: 87 GKWLTGSFNLTSHFTLFLHKDAILLAAQDLNEYPILKALPSYGRGRDAAGGRFASLIFGT 146
Query: 142 NLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWF 201
NL+DVIITG+NGTIDGQGS+WW KFH +L TRPY+IE+M+SD IQISNLT ++SP+W
Sbjct: 147 NLSDVIITGNNGTIDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWN 206
Query: 202 VHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYG 261
+HP+YSSNII+ G+TI+APV SPNTDGINPDSCTN RIED +I+SGDDCIA+KSGWDEYG
Sbjct: 207 IHPVYSSNIIVKGVTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYG 266
Query: 262 IKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGR 321
I GMP++ ++IRRLTCISP SA +ALGSEMSGGI+DVR ED+TA TES +RIK+AVGR
Sbjct: 267 ISFGMPTKHLVIRRLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGR 326
Query: 322 GAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAG 381
GAFVK+I+VKGM+L+TMK+VFWMTG+Y H D+ +DP+ALP+I+GINYRD+ A+NV++AG
Sbjct: 327 GAFVKNIYVKGMNLHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAG 386
Query: 382 KLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQEKEIE--- 438
+LEGIS DPFTGIC+SN TI M+A KK W C+D+ GVTS V PKPC+LL +E E
Sbjct: 387 RLEGISGDPFTGICISNATISMAAKHKKAIWMCSDVEGVTSGVDPKPCDLLDGQESETTK 446
Query: 439 -------CPFPTDKLAIENVQFKTCNFQSS 461
C FPTD L I+NV+ KTC++Q S
Sbjct: 447 KKMIDGGCDFPTDVLEIDNVELKTCSYQMS 476
>emb|CAB62015.1| endo-polygalacturonase-like protein [Arabidopsis thaliana]
gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28
protein [Arabidopsis thaliana]
gi|15229058|ref|NP_190464.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana] gi|11357281|pir||T46135
endo-polygalacturonase-like protein - Arabidopsis
thaliana
Length = 469
Score = 647 bits (1669), Expect = 0.0
Identities = 304/459 (66%), Positives = 373/459 (81%), Gaps = 6/459 (1%)
Query: 4 VISVVLILGSLAECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAI 63
++ + + L E R + + ++ A+NCRKHSA+LTDFGAVGDGKT NTKAF AI
Sbjct: 9 LVFLAIFLFPAIESRSHRNSVTSKIEFSALNCRKHSAILTDFGAVGDGKTSNTKAFRNAI 68
Query: 64 TNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSY 123
+ LSQ A DGGAQL+VPPGKWLTGSFNLTSHFTLF+Q+ A IL SQDESEWP + LPSY
Sbjct: 69 SKLSQMATDGGAQLVVPPGKWLTGSFNLTSHFTLFIQRGATILASQDESEWPVIAPLPSY 128
Query: 124 GRGRDAPA-GRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIM 182
G+GRD GRF+SLI GTNLTDV+ITG+NGTI+GQG YWWDKF KKQ +TRPY+IEI+
Sbjct: 129 GKGRDGTGTGRFNSLISGTNLTDVVITGNNGTINGQGQYWWDKFKKKQFKITRPYLIEIL 188
Query: 183 YSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDN 242
+S IQISN+TLI+SP+W +HP+Y +++I+ +T+LAPV PNTDGINPDSCTN IED
Sbjct: 189 FSKNIQISNITLIDSPSWNIHPVYCNSVIVKSVTVLAPVTVPNTDGINPDSCTNTLIEDC 248
Query: 243 FIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIE 302
+IVSGDDCIA+KSGWD+YGIK GMP+QQ+ IRRLTCISP SA VALGSEMSGGI+DVRIE
Sbjct: 249 YIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIRRLTCISPKSAGVALGSEMSGGIKDVRIE 308
Query: 303 DVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALP 362
DVT NTESAIRIK+AVGRGA+VKDI+ + + + TMKYVFWM+G+YG HPD GFDP ALP
Sbjct: 309 DVTLTNTESAIRIKTAVGRGAYVKDIYARRITMKTMKYVFWMSGNYGSHPDEGFDPKALP 368
Query: 363 KISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTS 422
+I+ INYRD+TA+NVT++ L+GI DPFTGIC+SNVTI ++A KK+ WNCTD++GVTS
Sbjct: 369 EITNINYRDMTAENVTMSASLDGIDKDPFTGICISNVTIALAAKAKKMQWNCTDVAGVTS 428
Query: 423 NVVPKPCELLQEKE-----IECPFPTDKLAIENVQFKTC 456
V P+PC LL EK+ ++C FP+D + IE+V K C
Sbjct: 429 RVTPEPCSLLPEKKAQAKNVDCAFPSDLIPIESVVLKKC 467
>gb|AAC63679.1| putative polygalacturonase [Arabidopsis thaliana]
gi|25412169|pir||B84630 probable polygalacturonase
[imported] - Arabidopsis thaliana
Length = 466
Score = 620 bits (1599), Expect = e-176
Identities = 297/458 (64%), Positives = 363/458 (78%), Gaps = 5/458 (1%)
Query: 5 ISVVLILGSLA--ECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAA 62
I VVL + S + E R +S N +Y A+NCRKH+AVLT+FGAVGDGKT NTKAF A
Sbjct: 8 ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEA 67
Query: 63 ITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPS 122
IT L+ A DGG QLIVPPGKWLTGSFNLTSHFTLF+QK A IL SQDESE+P + LPS
Sbjct: 68 ITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPS 127
Query: 123 YGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLT-LTRPYMIEI 181
YG+GRDA F+SLI GTNLTDV+ITG+NGTI+GQG YWW K+ +TRPY IEI
Sbjct: 128 YGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEI 187
Query: 182 MYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIED 241
++S +QISN+T+I+SP W +HP+Y +N+I+ G+TILAP+DSPNTDGINPDSCTN IED
Sbjct: 188 IFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIED 247
Query: 242 NFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRI 301
++VSGDDCIA+KSGWD++GIKVGMP+QQ+ IRRLTCISPDSA +ALGSEMSGGI+DVRI
Sbjct: 248 CYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRI 307
Query: 302 EDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNAL 361
ED+T + T+SAIRIK+AVGRG +VKDIF + + TMKYVFWM+G+Y HP +GFDP A+
Sbjct: 308 EDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAM 367
Query: 362 PKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVT 421
P I+ INYRD+TA NVT +L+G NDPFT IC+SN+ I+++A KKL WNCT ISGV+
Sbjct: 368 PVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVS 427
Query: 422 SNVVPKPCELLQEK--EIECPFPTDKLAIENVQFKTCN 457
S V PKPC LL EK ++C FP DK+ IE+V C+
Sbjct: 428 SKVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKCS 465
>ref|NP_179968.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 477
Score = 620 bits (1599), Expect = e-176
Identities = 297/458 (64%), Positives = 363/458 (78%), Gaps = 5/458 (1%)
Query: 5 ISVVLILGSLA--ECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAA 62
I VVL + S + E R +S N +Y A+NCRKH+AVLT+FGAVGDGKT NTKAF A
Sbjct: 19 ILVVLAISSFSMMEARDLASKGKTNIEYMALNCRKHTAVLTEFGAVGDGKTSNTKAFKEA 78
Query: 63 ITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPS 122
IT L+ A DGG QLIVPPGKWLTGSFNLTSHFTLF+QK A IL SQDESE+P + LPS
Sbjct: 79 ITKLAPKAADGGVQLIVPPGKWLTGSFNLTSHFTLFIQKGATILASQDESEYPVVAPLPS 138
Query: 123 YGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLT-LTRPYMIEI 181
YG+GRDA F+SLI GTNLTDV+ITG+NGTI+GQG YWW K+ +TRPY IEI
Sbjct: 139 YGQGRDAAGPTFASLISGTNLTDVVITGNNGTINGQGKYWWVKYRSGGFKGITRPYTIEI 198
Query: 182 MYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIED 241
++S +QISN+T+I+SP W +HP+Y +N+I+ G+TILAP+DSPNTDGINPDSCTN IED
Sbjct: 199 IFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNTLIED 258
Query: 242 NFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRI 301
++VSGDDCIA+KSGWD++GIKVGMP+QQ+ IRRLTCISPDSA +ALGSEMSGGI+DVRI
Sbjct: 259 CYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSIRRLTCISPDSAGIALGSEMSGGIKDVRI 318
Query: 302 EDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNAL 361
ED+T + T+SAIRIK+AVGRG +VKDIF + + TMKYVFWM+G+Y HP +GFDP A+
Sbjct: 319 EDITLLQTQSAIRIKTAVGRGGYVKDIFARRFTMKTMKYVFWMSGAYNQHPASGFDPKAM 378
Query: 362 PKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVT 421
P I+ INYRD+TA NVT +L+G NDPFT IC+SN+ I+++A KKL WNCT ISGV+
Sbjct: 379 PVITNINYRDMTADNVTQPARLDGFKNDPFTKICMSNIKIDLAAEPKKLLWNCTSISGVS 438
Query: 422 SNVVPKPCELLQEK--EIECPFPTDKLAIENVQFKTCN 457
S V PKPC LL EK ++C FP DK+ IE+V C+
Sbjct: 439 SKVTPKPCSLLPEKGAPVDCAFPVDKIPIESVVLNKCS 476
>emb|CAB79305.1| putative protein [Arabidopsis thaliana] gi|3451075|emb|CAA20471.1|
putative protein [Arabidopsis thaliana]
gi|23296346|gb|AAN13048.1| unknown protein [Arabidopsis
thaliana] gi|62320484|dbj|BAD95012.1| hypothetical
protein [Arabidopsis thaliana]
gi|15236514|ref|NP_194081.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana] gi|7485556|pir||T05388
hypothetical protein F16G20.200 - Arabidopsis thaliana
Length = 495
Score = 610 bits (1574), Expect = e-173
Identities = 285/433 (65%), Positives = 352/433 (80%), Gaps = 4/433 (0%)
Query: 28 FDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTG 87
F+Y AI+CR +SA L +FGAVGDG T NT AF A++ LS++A+ GG+ L VP G+WLTG
Sbjct: 56 FEYSAISCRAYSASLDEFGAVGDGVTSNTAAFRDAVSQLSRFADYGGSLLFVPAGRWLTG 115
Query: 88 SFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVI 147
+FNLTSHFTLFL +DAVIL SQ+ES++ + LPSYGRGRD GRF SL+FG+NLTDV+
Sbjct: 116 NFNLTSHFTLFLHRDAVILASQEESDYEVIEPLPSYGRGRDTDGGRFISLLFGSNLTDVV 175
Query: 148 ITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYS 207
ITG+NGTIDGQG WW KF + +L TRPY+IEIM+SD IQISNLT +NSP+W +HP+YS
Sbjct: 176 ITGENGTIDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYS 235
Query: 208 SNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMP 267
SNI I GLTILAPV PNTDGINPDSCTN RIED +IVSGDDCIA+KSGWD+YGI GMP
Sbjct: 236 SNIYIQGLTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMP 295
Query: 268 SQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKD 327
++Q++IRRLTCISPDSA++ALGSEMSGGI+DVR ED+ AIN+ES IRIK+A+GRG +VKD
Sbjct: 296 TKQLLIRRLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKD 355
Query: 328 IFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGIS 387
++V+GM + TMKYVFWMTGSYG HPD+ +DP ALP I INY+D+ A+NVT+ +L GIS
Sbjct: 356 VYVRGMTMMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGIS 415
Query: 388 NDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQEKE----IECPFPT 443
D FTGIC+SNVTI +S KK+ WNCTD+SG TS V P+PC+LL EK+ + C FP
Sbjct: 416 GDQFTGICISNVTITLSKKPKKVLWNCTDVSGYTSGVTPQPCQLLPEKQPGTVVPCNFPE 475
Query: 444 DKLAIENVQFKTC 456
D + I+ V+ + C
Sbjct: 476 DPIPIDEVKLQRC 488
>ref|XP_550458.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|55295844|dbj|BAD67712.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 485
Score = 587 bits (1512), Expect = e-166
Identities = 277/433 (63%), Positives = 342/433 (78%), Gaps = 5/433 (1%)
Query: 30 YPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGG--AQLIVPPGKWLTG 87
Y A +CR H+A LTDFG VGDG T NT AF +A+ +LSQY+ +GG A L VP GKWLTG
Sbjct: 48 YLAPSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTG 107
Query: 88 SFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVI 147
FNLTSHFTLFL DAVILGSQD EWP + LPSYGRGRD GR++SLI G+NLTDV+
Sbjct: 108 PFNLTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVV 167
Query: 148 ITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYS 207
ITG NGTIDGQG+ WW KFH +L TR Y+IE+M+SD + ISN+TL+NSP W +HP+YS
Sbjct: 168 ITGANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYS 227
Query: 208 SNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMP 267
SNI++ G+TILAP SPNTDGINPDSC++VRIED +IVSGDDC+AIKSGWDEYGI GMP
Sbjct: 228 SNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMP 287
Query: 268 SQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKD 327
SQ I++RRLTC+SP SA++ALGSEMSGGI DVR ED+TA+N+ESA+RIK+AVGRGA+V+D
Sbjct: 288 SQHIVVRRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRD 347
Query: 328 IFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNV-TIAGKLEGI 386
+FV+GM L+TMK+VFWMTG+Y HPD+G+DPNA+P + I+Y+DV A V A +LEGI
Sbjct: 348 VFVRGMSLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGI 407
Query: 387 SNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQ-EKEIECPFPTDK 445
PF GIC++NVT +S +K PW CTDI GV++ V P PC+ LQ + CPFPTD
Sbjct: 408 QGAPFRGICIANVTATLS-KSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHDGACPFPTDT 466
Query: 446 LAIENVQFKTCNF 458
L I+ + + C +
Sbjct: 467 LPIDQLVMQQCAY 479
>ref|NP_910226.1| ESTs AU029388(E30287),D49277(S16474) correspond to a region of the
predicted gene.~Similar to Arabidopsis thaliana DNA
chromosome 4, BAC clone F16G20, picA protein. (AL031326)
[Oryza sativa (japonica cultivar-group)]
Length = 477
Score = 587 bits (1512), Expect = e-166
Identities = 277/433 (63%), Positives = 342/433 (78%), Gaps = 5/433 (1%)
Query: 30 YPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGG--AQLIVPPGKWLTG 87
Y A +CR H+A LTDFG VGDG T NT AF +A+ +LSQY+ +GG A L VP GKWLTG
Sbjct: 40 YLAPSCRAHTASLTDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTG 99
Query: 88 SFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVI 147
FNLTSHFTLFL DAVILGSQD EWP + LPSYGRGRD GR++SLI G+NLTDV+
Sbjct: 100 PFNLTSHFTLFLHSDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVV 159
Query: 148 ITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYS 207
ITG NGTIDGQG+ WW KFH +L TR Y+IE+M+SD + ISN+TL+NSP W +HP+YS
Sbjct: 160 ITGANGTIDGQGAMWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYS 219
Query: 208 SNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMP 267
SNI++ G+TILAP SPNTDGINPDSC++VRIED +IVSGDDC+AIKSGWDEYGI GMP
Sbjct: 220 SNIVVQGVTILAPTHSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMP 279
Query: 268 SQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKD 327
SQ I++RRLTC+SP SA++ALGSEMSGGI DVR ED+TA+N+ESA+RIK+AVGRGA+V+D
Sbjct: 280 SQHIVVRRLTCVSPTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRD 339
Query: 328 IFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNV-TIAGKLEGI 386
+FV+GM L+TMK+VFWMTG+Y HPD+G+DPNA+P + I+Y+DV A V A +LEGI
Sbjct: 340 VFVRGMSLDTMKWVFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGI 399
Query: 387 SNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQ-EKEIECPFPTDK 445
PF GIC++NVT +S +K PW CTDI GV++ V P PC+ LQ + CPFPTD
Sbjct: 400 QGAPFRGICIANVTATLS-KSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHDGACPFPTDT 458
Query: 446 LAIENVQFKTCNF 458
L I+ + + C +
Sbjct: 459 LPIDQLVMQQCAY 471
>ref|XP_470318.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|40714685|gb|AAR88591.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 476
Score = 446 bits (1146), Expect = e-124
Identities = 216/399 (54%), Positives = 283/399 (70%), Gaps = 5/399 (1%)
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R HS +T+FGAVGDG TLNTKAF AI L+ +A+ GGAQL VP G+WLTGSF+L SH
Sbjct: 39 RPHSVTITEFGAVGDGVTLNTKAFQNAIFYLNSFADKGGAQLFVPAGRWLTGSFSLISHL 98
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TL L KDA I+GS D S+WP + LPSYGRGR+ P R SLIFGTNLTDVIITG NGTI
Sbjct: 99 TLSLDKDAEIIGSPDSSDWPVIDPLPSYGRGRELPGKRHQSLIFGTNLTDVIITGANGTI 158
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQG+ WWD FH L TRP+++E+MYS + ISNLT NSP W +HP+Y S +++ +
Sbjct: 159 DGQGAIWWDWFHSNTLNYTRPHLVELMYSTDVVISNLTFKNSPFWNIHPVYCSQVLVQHV 218
Query: 216 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 275
TILAP++SPNTDGI+PDS TNV I+ ++ +GDD I IKSGWDEYGI PS I I
Sbjct: 219 TILAPLNSPNTDGIDPDSSTNVCIDHCYVRNGDDVIVIKSGWDEYGISFARPSTNISISN 278
Query: 276 LTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDL 335
+T + A +A GSEMSGGI +VR E + +N+ IRIK+A GRG +VK++++ + +
Sbjct: 279 ITGETRGGAGIAFGSEMSGGISEVRAEGLRIVNSMHGIRIKTAPGRGGYVKNVYISDVSM 338
Query: 336 NTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 395
+ + +TG++G+HPD+ +D NALP IS I +V NV +AG LEGI D F+ IC
Sbjct: 339 DNVSMAIRITGNFGEHPDDKYDRNALPMISNITIENVVGVNVGVAGILEGIEGDNFSSIC 398
Query: 396 VSNVTIEM-SAHKKKLPWNCTDISGVTSNVVPKPCELLQ 433
+SNV++ + S H PWNC+ I G +++V+P+ CE L+
Sbjct: 399 LSNVSLSVQSMH----PWNCSLIEGYSNSVIPESCEQLR 433
>gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gi|11762132|gb|AAG40344.1|
AT3g62110 [Arabidopsis thaliana]
gi|18412253|ref|NP_567126.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana]
Length = 471
Score = 436 bits (1121), Expect = e-121
Identities = 208/421 (49%), Positives = 289/421 (68%), Gaps = 2/421 (0%)
Query: 15 AECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGG 74
A C V S+ + +++ R HS +T+FGAVGDG TLNTKAF A+ L+ +++ GG
Sbjct: 19 AWCSVGESLHCEYSNLASLH-RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGG 77
Query: 75 AQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRF 134
A+L VP G+WLTGSF+L SH TL+L K A ILGS WP + LPSYGRGR+ P R
Sbjct: 78 AKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTSSENWPVVDPLPSYGRGRELPGRRH 137
Query: 135 SSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTL 194
SLI+G NLTDV+ITG+NGTIDGQG+ WWD F +L TRP+++E+M S + ISNLT
Sbjct: 138 RSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTF 197
Query: 195 INSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIK 254
+NSP W +HP+Y ++++ LTILAP++SPNTDG++PDS TNV IED +IV+GDD ++IK
Sbjct: 198 LNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIK 257
Query: 255 SGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIR 314
SGWDEYGI PS +I I RLT + S+ +A+GSEMSGG+ ++ I+D+ N+ + IR
Sbjct: 258 SGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIR 317
Query: 315 IKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTA 374
IK++ GRG +V+++ + + L+ +K TG YG+HPD +DP ALP I I + +V
Sbjct: 318 IKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNG 377
Query: 375 KNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPK-PCELLQ 433
+ +AG LEGI D F IC NVT+ + + KK PW C+++ G + V P+ C+ L+
Sbjct: 378 DGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLK 437
Query: 434 E 434
E
Sbjct: 438 E 438
>emb|CAB71871.1| putative protein [Arabidopsis thaliana] gi|11263971|pir||T48003
hypothetical protein T17J13.70 - Arabidopsis thaliana
Length = 470
Score = 431 bits (1109), Expect = e-119
Identities = 208/421 (49%), Positives = 291/421 (68%), Gaps = 3/421 (0%)
Query: 15 AECRVPSSIKLNNFDYPAINCRKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGG 74
A C V S+ + +++ R HS +T+FGAVGDG TLNTKAF A+ L+ +++ GG
Sbjct: 19 AWCSVGESLHCEYSNLASLH-RPHSVSITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGG 77
Query: 75 AQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRF 134
A+L VP G+WLTGSF+L SH TL+L K A ILGS ++ WP + LPSYGRGR+ P R
Sbjct: 78 AKLFVPAGQWLTGSFDLISHLTLWLDKGATILGSTAKN-WPVVDPLPSYGRGRELPGRRH 136
Query: 135 SSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTL 194
SLI+G NLTDV+ITG+NGTIDGQG+ WWD F +L TRP+++E+M S + ISNLT
Sbjct: 137 RSLIYGQNLTDVVITGENGTIDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTF 196
Query: 195 INSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIK 254
+NSP W +HP+Y ++++ LTILAP++SPNTDG++PDS TNV IED +IV+GDD ++IK
Sbjct: 197 LNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIK 256
Query: 255 SGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIR 314
SGWDEYGI PS +I I RLT + S+ +A+GSEMSGG+ ++ I+D+ N+ + IR
Sbjct: 257 SGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIR 316
Query: 315 IKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTA 374
IK++ GRG +V+++ + + L+ +K TG YG+HPD +DP ALP I I + +V
Sbjct: 317 IKTSAGRGGYVRNVHILNVKLDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNG 376
Query: 375 KNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPK-PCELLQ 433
+ +AG LEGI D F IC NVT+ + + KK PW C+++ G + V P+ C+ L+
Sbjct: 377 DGIGVAGLLEGIEGDVFKNICFLNVTLRVKKNSKKSPWECSNVRGYSQWVSPEITCDSLK 436
Query: 434 E 434
E
Sbjct: 437 E 437
>ref|XP_477242.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|34393209|dbj|BAC82923.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 446
Score = 411 bits (1056), Expect = e-113
Identities = 198/363 (54%), Positives = 259/363 (70%), Gaps = 3/363 (0%)
Query: 71 NDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAP 130
N GGA+L VP G+WLTGSFNL SH T+ L DAVI+GSQD S+WP + LPSYGRGR+ P
Sbjct: 44 NKGGAELFVPAGRWLTGSFNLISHLTVSLDADAVIIGSQDSSDWPVIDPLPSYGRGRELP 103
Query: 131 AGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQIS 190
R SLIFG+NLTDVIITG NGTIDGQG WW+ FH L TRP ++E+MYSD++ IS
Sbjct: 104 GKRHQSLIFGSNLTDVIITGANGTIDGQGELWWNWFHNHTLNYTRPPLLELMYSDRVVIS 163
Query: 191 NLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDC 250
NLT +N+P W +HP+Y S +++ LTILAP+ SPNTDGI+PDS +NV IED +I +GDD
Sbjct: 164 NLTFMNAPFWNIHPVYCSQVLVQHLTILAPISSPNTDGIDPDSSSNVCIEDCYIRNGDDI 223
Query: 251 IAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTE 310
+ IKSGWDEYGI PS I IR +T + +SA +A GSEMSGGI DVR E + IN+
Sbjct: 224 VVIKSGWDEYGISFAHPSSNISIRNITGQTRNSAGIAFGSEMSGGISDVRAEGLRFINSV 283
Query: 311 SAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYR 370
IRIK+A GRG +VK+I++ + ++ + +TG+YG+HPD+ +D NALP IS I +
Sbjct: 284 HGIRIKTAPGRGGYVKNIYIADVSMDNVSIAIRITGNYGEHPDDNYDKNALPVISNITIK 343
Query: 371 DVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCE 430
+V N+ AG L GI D F+ IC+SNV++ + K PWNC+ I G +++V P+ CE
Sbjct: 344 NVVGVNIGTAGMLLGIQGDIFSNICLSNVSL---SSKSADPWNCSLIEGFSNSVAPEICE 400
Query: 431 LLQ 433
L+
Sbjct: 401 QLR 403
>emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana]
gi|4454051|emb|CAA23048.1| putative polygalacturonase
[Arabidopsis thaliana] gi|22136230|gb|AAM91193.1|
putative polygalacturonase [Arabidopsis thaliana]
gi|17065242|gb|AAL32775.1| putative polygalacturonase
[Arabidopsis thaliana] gi|15236625|ref|NP_194113.1|
glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein
[Arabidopsis thaliana] gi|7486746|pir||T05614
hypothetical protein F9D16.290 - Arabidopsis thaliana
Length = 444
Score = 406 bits (1044), Expect = e-112
Identities = 199/392 (50%), Positives = 263/392 (66%), Gaps = 2/392 (0%)
Query: 42 LTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 101
+TDFG VGDG+T+NTKAF AAI + GG L +PPG +LT SFNLTSH TL+L K
Sbjct: 43 ITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTLYLAK 102
Query: 102 DAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSY 161
AVI QD WP + LPSYGRGR+ P GR+ S I G L DV+ITG NGTIDGQG
Sbjct: 103 GAVIRAVQDTWNWPLIDPLPSYGRGRELPGGRYMSFIHGDGLRDVVITGQNGTIDGQGEV 162
Query: 162 WWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPV 221
WW+ + + L TRP +IE S +I ISN+ NSP W +HP+Y SN++I+ +TILAP
Sbjct: 163 WWNMWRSRTLKYTRPNLIEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQ 222
Query: 222 DSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISP 281
DSPNTDGI+PDS NV IED++I +GDD +AIKSGWD+YGI G PS I IRR+T SP
Sbjct: 223 DSPNTDGIDPDSSYNVCIEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITGSSP 282
Query: 282 DSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYV 341
A +A+GSE SGGI+++ E +T N + IK+ +GRG ++K+I + + ++T KY
Sbjct: 283 -FAGIAIGSETSGGIKNIIAEHITLSNMGVGVNIKTNIGRGGYIKNIKISDVYVDTAKYG 341
Query: 342 FWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTI 401
+ G GDHPD ++PNALP + GI+ ++V NV AG ++G+ PFTGIC+S + +
Sbjct: 342 IKIAGDTGDHPDENYNPNALPVVKGIHIKNVWGVNVRNAGSIQGLKGSPFTGICLSEINL 401
Query: 402 EMSAHKKKLPWNCTDISGVTSNVVPKPCELLQ 433
S + K W C+D+SG + V P PC L+
Sbjct: 402 HGSLNSYK-TWKCSDVSGTSLKVSPWPCSELR 432
>gb|AAO42348.1| putative polygalacturonase [Arabidopsis thaliana]
gi|27754320|gb|AAO22613.1| putative polygalacturonase
[Arabidopsis thaliana] gi|22329119|ref|NP_195070.2|
glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein
[Arabidopsis thaliana]
Length = 475
Score = 399 bits (1024), Expect = e-109
Identities = 197/395 (49%), Positives = 270/395 (67%), Gaps = 3/395 (0%)
Query: 42 LTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQK 101
+TDFG VGDGKT NT AF A+ +L +A +GGAQL VP G WL+GSFNLTS+FTLFL++
Sbjct: 74 ITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTLFLER 133
Query: 102 DAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSY 161
A+ILGS+D EWP + LPSYGRGR+ P GR SLI G NLT+V+ITG+NGTIDGQG
Sbjct: 134 GALILGSKDLDEWPIIEPLPSYGRGRERPGGRHISLIHGDNLTNVVITGENGTIDGQGKM 193
Query: 162 WWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPV 221
WW+ + + L TR ++IE+ S I ISNLTL+NSP W +HP+Y SN++I +TILAP+
Sbjct: 194 WWELWWNRTLVHTRGHLIELKNSHNILISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPM 253
Query: 222 DSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISP 281
++PNTDGI+PDS TNV IED +I SGDD +A+KSGWD+YG+ V PS I+IRR++ +
Sbjct: 254 NAPNTDGIDPDSSTNVCIEDCYIESGDDLVAVKSGWDQYGMAVARPSSNIVIRRISGTTR 313
Query: 282 DSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYV 341
+ V +GSEMSGGI ++ +ED+ ++ + +RIK+ GRG ++ +I + L +K
Sbjct: 314 TCSGVGIGSEMSGGIFNITVEDIHVWDSAAGLRIKTDKGRGGYISNITFNNVLLEKVKVP 373
Query: 342 FWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTI 401
+ DH D+ +DP ALP++ GI +V + N A L G+ F +C+ NVT+
Sbjct: 374 IRFSSGSNDHSDDKWDPKALPRVKGIYISNVVSLNSRKAPMLLGVEGTSFQDVCLRNVTL 433
Query: 402 EMSAHKKKLPWNCTDISGVTSNVVPKPC-ELLQEK 435
+K W C D+SG S+V P C +LLQ+K
Sbjct: 434 LGLPKTEK--WKCKDVSGYASDVFPLSCPQLLQKK 466
>ref|XP_479704.1| putative exo-poly-alpha-D-galacturonosidase precursor [Oryza sativa
(japonica cultivar-group)] gi|42408232|dbj|BAD09389.1|
putative exo-poly-alpha-D-galacturonosidase precursor
[Oryza sativa (japonica cultivar-group)]
Length = 482
Score = 392 bits (1006), Expect = e-107
Identities = 196/395 (49%), Positives = 263/395 (65%), Gaps = 2/395 (0%)
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R SA + +FGAVGDG T NT AF A+ L A GGA+L VPPG+W+TGSFNLTS F
Sbjct: 76 RAASASVEEFGAVGDGVTSNTAAFRRAVAALEARAGGGGARLEVPPGRWVTGSFNLTSRF 135
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TLFL A+ILGSQD EWP + LPSYGRGR+ R SLI G L DV+ITG+NGTI
Sbjct: 136 TLFLHHGAIILGSQDPEEWPLIAPLPSYGRGRERLGPRHISLIHGEGLDDVVITGNNGTI 195
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQG WWD + + L TR ++IE++ S I ISN+TL NSP W VHP+Y N++I L
Sbjct: 196 DGQGRIWWDLWWNRTLNHTRGHLIELVDSTNIMISNITLRNSPFWTVHPVYCRNVVIRNL 255
Query: 216 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 275
T+LAP+++PNTDGI+PDS + V IED +I SGDD +A+KSGWD+YGI VG PS III+R
Sbjct: 256 TVLAPLNAPNTDGIDPDSSSEVCIEDCYIESGDDLVAVKSGWDQYGISVGKPSSNIIIQR 315
Query: 276 LTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDL 335
++ +P + V GSEMSGGI +V I D+ N+ A+RIK+ VGRG ++ +I ++ + +
Sbjct: 316 VSGTTPTCSGVGFGSEMSGGISNVIIRDLHVWNSAQAVRIKTDVGRGGYITNITIENVRM 375
Query: 336 NTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 395
+K + DH D+ +D +ALPKIS + RDV ++ A LE + + GIC
Sbjct: 376 EKVKVPIRFSRGADDHSDDKYDRSALPKISDVRIRDVVGVDLQRAPMLEAVHGAVYEGIC 435
Query: 396 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCE 430
NV+ ++ K++ W+C + G +V+P PCE
Sbjct: 436 FRNVS--LTVIKRQDRWHCESVYGEAHDVLPAPCE 468
>ref|NP_917710.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
Length = 446
Score = 392 bits (1006), Expect = e-107
Identities = 192/385 (49%), Positives = 259/385 (66%), Gaps = 4/385 (1%)
Query: 46 GAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHFTLFLQKDAVI 105
G GDG+TL+T AF AA+ ++ + GGA L VPPG WLTG FNLTSH TLFL + AVI
Sbjct: 49 GGGGDGRTLSTAAFQAAVASIERRRAPGGALLYVPPGVWLTGPFNLTSHMTLFLARGAVI 108
Query: 106 LGSQ-DESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWD 164
+Q D S WP + LPSYGRGR+ P GR+ SLI G L DV+ITGDNGTIDGQGS WWD
Sbjct: 109 RATQQDTSSWPLIEPLPSYGRGRELPGGRYMSLIHGNGLQDVVITGDNGTIDGQGSAWWD 168
Query: 165 KFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSP 224
+ K L TRP+++E+M S + +SN+ +SP W +HP+Y SN++I +T+LAP DSP
Sbjct: 169 MWKKGTLPFTRPHLLELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSP 228
Query: 225 NTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSA 284
NTDGI+PDS +NV IED +I +GDD IAIKSGWDEYG+ G PS I IRR+T SP A
Sbjct: 229 NTDGIDPDSSSNVCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSP-FA 287
Query: 285 MVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWM 344
A+GSE SGG++ V E + ++ I IK+ GRG F++++ V + L++++Y +
Sbjct: 288 GFAVGSETSGGVEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRI 347
Query: 345 TGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMS 404
G G HPD+ +D NALP + G+ ++V +N+ AG ++GI+ F+ IC+SNV +
Sbjct: 348 AGDVGGHPDDRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGG 407
Query: 405 AHKKKLPWNCTDISGVTSNVVPKPC 429
A + PW C +SG +V P PC
Sbjct: 408 AAVR--PWKCEAVSGAALDVQPSPC 430
>dbj|BAD27952.1| putative polygalacturonase [Oryza sativa (japonica cultivar-group)]
gi|50251675|dbj|BAD29699.1| putative polygalacturonase
[Oryza sativa (japonica cultivar-group)]
Length = 443
Score = 388 bits (997), Expect = e-106
Identities = 185/394 (46%), Positives = 254/394 (63%), Gaps = 3/394 (0%)
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R + + +FG VGDG+T+NT AF+ A+ + GG L+VP G WLTGSFNLTSH
Sbjct: 39 RPETVSIAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHM 98
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TLFL + AV+ +Q+ WP LPSYGRGR+ P R++S I G L D++ITGD G I
Sbjct: 99 TLFLARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGII 158
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQG WW+ + ++ L TRP ++E M+S I ISN+ L NSP W +HP+Y N++I +
Sbjct: 159 DGQGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM 218
Query: 216 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 275
I+AP DSPNTDG++PDS TNV IED++I +GDD +AIKSGWDEYGI G PS I IRR
Sbjct: 219 MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRR 278
Query: 276 LTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDL 335
+ SP S +A+GSE SGG+ +V +ED + N+ I IK+ +GRG F+++I V + +
Sbjct: 279 VRGSSPFSG-IAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDNVRM 337
Query: 336 NTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 395
N+++ + G GDHPD F ALP + ++ ++V NV G +EGI N PFT IC
Sbjct: 338 NSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSPFTRIC 397
Query: 396 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC 429
++NV ++ + W C D+ G V P PC
Sbjct: 398 LANV--KLFGWRNNAAWKCRDVHGAALGVQPGPC 429
>dbj|BAB10662.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|50897172|gb|AAT85725.1| At5g41870 [Arabidopsis
thaliana] gi|15238207|ref|NP_199002.1| glycoside
hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 449
Score = 378 bits (970), Expect = e-103
Identities = 193/395 (48%), Positives = 258/395 (64%), Gaps = 4/395 (1%)
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDG-GAQLIVPPGKWLTGSFNLTSH 94
R ++DFGAVGDGKTLNTKAFN+AI + N G L VP G +LT SFNLTSH
Sbjct: 41 RNEMLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSH 100
Query: 95 FTLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGT 154
TL+L AVI QD +WP LPSYGRGR+ P R+ S I G L DV+ITG NGT
Sbjct: 101 MTLYLADGAVIKAVQDTEKWPLTDPLPSYGRGREHPGRRYISFIHGDGLNDVVITGRNGT 160
Query: 155 IDGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIING 214
IDGQG WW+ + L TRP +IE S I +S++ L NSP W +HP+Y SN++++
Sbjct: 161 IDGQGEPWWNMWRHGTLKFTRPGLIEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHH 220
Query: 215 LTILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIR 274
+TILAP DS NTDGI+PDS +NV IED++I +GDD +A+KSGWDEYGI PS+ I IR
Sbjct: 221 VTILAPTDSYNTDGIDPDSSSNVCIEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIR 280
Query: 275 RLTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMD 334
R+T SP A +A+GSE SGGIQ+V +E++T N+ I IK+ +GRG ++ I + G+
Sbjct: 281 RITGSSP-FAGIAIGSETSGGIQNVTVENITLYNSGIGIHIKTNIGRGGSIQGITISGVY 339
Query: 335 LNTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGI 394
L ++ ++G GDHPD+ F+ +ALP + GI ++V V AG ++G+ + PFT +
Sbjct: 340 LEKVRTGIKISGDTGDHPDDKFNTSALPIVRGITIKNVWGIKVERAGMVQGLKDSPFTNL 399
Query: 395 CVSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPC 429
C SNVT ++ K+ W C+D+ G V P PC
Sbjct: 400 CFSNVT--LTGTKRSPIWKCSDVVGAADKVNPTPC 432
>gb|AAM62920.1| polygalacturonase, putative [Arabidopsis thaliana]
Length = 453
Score = 373 bits (958), Expect = e-102
Identities = 184/404 (45%), Positives = 256/404 (62%), Gaps = 3/404 (0%)
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R HS + +FGAVGDGKTLNT AF A+ L +A+ GGAQL VPPGKWLTGSFNLTSH
Sbjct: 34 RPHSVSILEFGAVGDGKTLNTIAFQNAVFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHL 93
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TLFL+K A IL S D S W + LPSYGRG + P R+ SLI G NL DV+ITG+NGT
Sbjct: 94 TLFLEKGATILASPDPSHWDVVSPLPSYGRGIELPGKRYRSLINGDNLIDVVITGENGTF 153
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQG+ WW+ L +RP++IE + S I ISNLT +N+P +HP+Y S I I +
Sbjct: 154 DGQGAAWWEWLESGSLNYSRPHIIEFVSSKHILISNLTFLNAPAINIHPVYCSQIHIRKV 213
Query: 216 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 275
I VDSP+ G+ PDS NV IED+ I G D +++KSGWD+YGI G P+ + IR
Sbjct: 214 LIETSVDSPHVLGVAPDSSDNVCIEDSTINVGHDAVSLKSGWDQYGIHYGRPTTAVHIRN 273
Query: 276 LTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDL 335
L SP A ++ GSEMSGG+ DV +E + ++ + ++ GRG ++++I + +DL
Sbjct: 274 LRLKSPTGAGISFGSEMSGGVSDVTVERLNIHSSLIGVAFRTTRGRGGYIRNITISDVDL 333
Query: 336 NTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 395
++ G G HPD+ FD +ALP ++ I R+ T ++ +AG L GI PFT IC
Sbjct: 334 TSVDTAIVTNGHTGSHPDDKFDRDALPVVTHIVMRNFTGVDIGVAGNLTGIGESPFTSIC 393
Query: 396 VSNVTIEMSAHKKKLPWNCTDISGVTSNVVPKPCELLQEKEIEC 439
++++ ++ + + W C+++SG + +V P+PC+ L C
Sbjct: 394 LADIHLQTRSEES---WICSNVSGFSDDVSPEPCQELMSSPSSC 434
>gb|AAM91751.1| unknown protein [Arabidopsis thaliana] gi|20258821|gb|AAM14020.1|
unknown protein [Arabidopsis thaliana]
gi|22327662|ref|NP_680409.1| glycoside hydrolase family
28 protein / polygalacturonase (pectinase) family
protein [Arabidopsis thaliana]
Length = 449
Score = 373 bits (958), Expect = e-102
Identities = 182/395 (46%), Positives = 253/395 (63%), Gaps = 1/395 (0%)
Query: 36 RKHSAVLTDFGAVGDGKTLNTKAFNAAITNLSQYANDGGAQLIVPPGKWLTGSFNLTSHF 95
R HS +TDFGAVGDGKTLNT AF A+ L +A+ GGAQL VPPG+WLTGSFNLTSH
Sbjct: 39 RPHSVKITDFGAVGDGKTLNTLAFQNAVFYLKSFADKGGAQLYVPPGRWLTGSFNLTSHL 98
Query: 96 TLFLQKDAVILGSQDESEWPQLLVLPSYGRGRDAPAGRFSSLIFGTNLTDVIITGDNGTI 155
TLFL+KDAVIL SQD S W LPSYGRG D P R+ SLI G L DV++TGDNGTI
Sbjct: 99 TLFLEKDAVILASQDPSHWQVTDALPSYGRGIDLPGKRYMSLINGDMLHDVVVTGDNGTI 158
Query: 156 DGQGSYWWDKFHKKQLTLTRPYMIEIMYSDQIQISNLTLINSPTWFVHPIYSSNIIINGL 215
DGQG WWD+F+ L +RP+++E + ++ + +SNLT +N+P + +H +Y N+ I+ +
Sbjct: 159 DGQGLVWWDRFNSHSLEYSRPHLVEFVSAENVIVSNLTFLNAPAYTIHSVYCRNLYIHRV 218
Query: 216 TILAPVDSPNTDGINPDSCTNVRIEDNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRR 275
T +SP T GI PDS NV I+++ I G D I++KSG DEYG+ P+ + IR
Sbjct: 219 TANTCPESPYTIGIVPDSSENVCIQESSINMGYDAISLKSGCDEYGLSYARPTANVQIRN 278
Query: 276 LTCISPDSAMVALGSEMSGGIQDVRIEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDL 335
+ + + ++ GSEMSGGI DV + D N+ S I ++ GRG ++K+I + + +
Sbjct: 279 VYLRAASGSSISFGSEMSGGISDVEVSDAHIHNSLSGIAFRTTNGRGGYIKEIDISNIHM 338
Query: 336 NTMKYVFWMTGSYGDHPDNGFDPNALPKISGINYRDVTAKNVTIAGKLEGISNDPFTGIC 395
+ F GS+G HPD+GFD NA P +S I D+ +N++ AG G PFT I
Sbjct: 339 VNVGTAFLANGSFGTHPDSGFDENAYPLVSHIRLHDIVGENISTAGYFFGTKESPFTSIL 398
Query: 396 VSNVTIEM-SAHKKKLPWNCTDISGVTSNVVPKPC 429
+SN+++ + ++ W C+ + G + VVP+PC
Sbjct: 399 LSNISLSIKNSASPADSWQCSYVDGSSEFVVPEPC 433
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 820,469,884
Number of Sequences: 2540612
Number of extensions: 36796987
Number of successful extensions: 77115
Number of sequences better than 10.0: 524
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 75854
Number of HSP's gapped (non-prelim): 665
length of query: 463
length of database: 863,360,394
effective HSP length: 132
effective length of query: 331
effective length of database: 527,999,610
effective search space: 174767870910
effective search space used: 174767870910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)
Medicago: description of AC121237.2