BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121234.11 - phase: 0 /pseudo
(92 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02535.1| NADPH:quinone oxidoreductase [Arabidopsis thalia... 128 3e-29
gb|AAD37373.1| NADPH:quinone oxidoreductase [Arabidopsis thaliana] 128 3e-29
dbj|BAC23037.1| NAD(P)H:quinone oxidoreductase [Solanum tuberosum] 117 7e-26
ref|NP_914671.1| putative NADPH:quinone oxidoreductase [Oryza sa... 100 9e-21
ref|NP_914673.1| putative NADPH:quinone oxidoreductase [Oryza sa... 92 3e-18
ref|NP_249895.1| hypothetical protein PA1204 [Pseudomonas aerugi... 77 1e-13
gb|AAT50243.1| PA1204 [synthetic construct] 77 1e-13
pdb|1X77|B Chain B, Crystal Struture Of A Nad(P)h-Dependent Fmn ... 77 1e-13
ref|ZP_00138805.1| COG0431: Predicted flavoprotein [Pseudomonas ... 77 1e-13
ref|YP_023262.1| hypothetical FMN-reductase [Picrophilus torridu... 73 2e-12
gb|AAK23515.1| conserved hypothetical protein [Caulobacter cresc... 71 8e-12
emb|CAC47073.1| PUTATIVE OXIDOREDUCTASE PROTEIN [Sinorhizobium m... 66 2e-10
ref|ZP_00307212.1| COG0431: Predicted flavoprotein [Ferroplasma ... 65 3e-10
ref|ZP_00310316.1| COG0431: Predicted flavoprotein [Cytophaga hu... 65 3e-10
ref|ZP_00152370.2| COG0431: Predicted flavoprotein [Dechloromona... 65 3e-10
ref|ZP_00006669.2| COG0431: Predicted flavoprotein [Rhodobacter ... 64 7e-10
gb|AAN69721.1| conserved hypothetical protein [Pseudomonas putid... 64 1e-09
gb|AAK56852.1| chromate reductase [Pseudomonas putida] 62 5e-09
ref|ZP_00166972.2| COG0431: Predicted flavoprotein [Ralstonia eu... 62 5e-09
ref|NP_691959.1| chromate reductase [Oceanobacillus iheyensis HT... 61 8e-09
>dbj|BAB02535.1| NADPH:quinone oxidoreductase [Arabidopsis thaliana]
gi|15232856|ref|NP_189427.1| NADPH-dependent FMN
reductase family protein [Arabidopsis thaliana]
Length = 196
Score = 128 bits (322), Expect = 3e-29
Identities = 60/87 (68%), Positives = 78/87 (88%)
Query: 5 VIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPP 64
+I+VAALSGS+RK S+H+GL+RAAI+L+K + G++IE+IDIS LP+ NTDLE GTYPP
Sbjct: 10 LIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLEVNGTYPP 69
Query: 65 LVEAFRHKILQADSVLFASPEYNYSVT 91
+VEAFR KIL+ADS+LFASPEYN+SV+
Sbjct: 70 VVEAFRQKILEADSILFASPEYNFSVS 96
>gb|AAD37373.1| NADPH:quinone oxidoreductase [Arabidopsis thaliana]
Length = 196
Score = 128 bits (322), Expect = 3e-29
Identities = 60/87 (68%), Positives = 78/87 (88%)
Query: 5 VIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPP 64
+I+VAALSGS+RK S+H+GL+RAAI+L+K + G++IE+IDIS LP+ NTDLE GTYPP
Sbjct: 10 LIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLEVNGTYPP 69
Query: 65 LVEAFRHKILQADSVLFASPEYNYSVT 91
+VEAFR KIL+ADS+LFASPEYN+SV+
Sbjct: 70 VVEAFRQKILEADSILFASPEYNFSVS 96
>dbj|BAC23037.1| NAD(P)H:quinone oxidoreductase [Solanum tuberosum]
Length = 194
Score = 117 bits (293), Expect = 7e-26
Identities = 58/90 (64%), Positives = 70/90 (77%)
Query: 2 ATAVIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGT 61
A VIKVA L GS+RK SY+ GL+ AA+E+ K + G+EIE++DIS LP NTDLE GT
Sbjct: 3 AQPVIKVAGLCGSLRKGSYNRGLLNAAMEICKDSITGMEIEYVDISPLPFLNTDLEVNGT 62
Query: 62 YPPLVEAFRHKILQADSVLFASPEYNYSVT 91
YPP+VEAFR KI +AD LFASPEYNYS+T
Sbjct: 63 YPPVVEAFRKKIEEADCFLFASPEYNYSIT 92
>ref|NP_914671.1| putative NADPH:quinone oxidoreductase [Oryza sativa (japonica
cultivar-group)] gi|15528813|dbj|BAB64708.1| putative
NADPH [Oryza sativa (japonica cultivar-group)]
Length = 197
Score = 100 bits (249), Expect = 9e-21
Identities = 49/90 (54%), Positives = 66/90 (72%), Gaps = 1/90 (1%)
Query: 2 ATAVIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLEN-EG 60
A VI+VAA+ GS+RK SY+ GL+RAA + + + G+ ++ +DIS LP+ NTDLE +G
Sbjct: 6 ARPVIRVAAICGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDLETADG 65
Query: 61 TYPPLVEAFRHKILQADSVLFASPEYNYSV 90
+PP VEAFR K+ QAD LF SPEYNYS+
Sbjct: 66 GFPPAVEAFRDKVRQADCFLFGSPEYNYSI 95
>ref|NP_914673.1| putative NADPH:quinone oxidoreductase [Oryza sativa (japonica
cultivar-group)] gi|15528815|dbj|BAB64710.1| putative
NADPH [Oryza sativa (japonica cultivar-group)]
Length = 203
Score = 92.0 bits (227), Expect = 3e-18
Identities = 44/86 (51%), Positives = 64/86 (74%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
++VAA+SGS+R+ S ++GLIRAA E+ + + G+ I+ +DI LP+ NTD+E + +PP
Sbjct: 10 LRVAAISGSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDMEVDDGFPPA 69
Query: 66 VEAFRHKILQADSVLFASPEYNYSVT 91
VEAFR + AD LFASPEYNYS++
Sbjct: 70 VEAFRASVRAADCFLFASPEYNYSIS 95
>ref|NP_249895.1| hypothetical protein PA1204 [Pseudomonas aeruginosa PAO1]
gi|9947131|gb|AAG04593.1| conserved hypothetical
protein [Pseudomonas aeruginosa PAO1]
gi|11347762|pir||H83495 conserved hypothetical protein
PA1204 [imported] - Pseudomonas aeruginosa (strain
PAO1)
Length = 185
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/85 (49%), Positives = 57/85 (66%), Gaps = 4/85 (4%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
IKV +SGS+R SY+S ++ AI L G+ IE DIS +P+YN D+ G +PP
Sbjct: 5 IKVLGISGSLRSGSYNSAALQEAIGL---VPPGMSIELADISGIPLYNEDVYALG-FPPA 60
Query: 66 VEAFRHKILQADSVLFASPEYNYSV 90
VE FR +I AD++LFA+PEYNYS+
Sbjct: 61 VERFREQIRAADALLFATPEYNYSM 85
>gb|AAT50243.1| PA1204 [synthetic construct]
Length = 186
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/85 (49%), Positives = 57/85 (66%), Gaps = 4/85 (4%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
IKV +SGS+R SY+S ++ AI L G+ IE DIS +P+YN D+ G +PP
Sbjct: 5 IKVLGISGSLRSGSYNSAALQEAIGL---VPPGMSIELADISGIPLYNEDVYALG-FPPA 60
Query: 66 VEAFRHKILQADSVLFASPEYNYSV 90
VE FR +I AD++LFA+PEYNYS+
Sbjct: 61 VERFREQIRAADALLFATPEYNYSM 85
>pdb|1X77|B Chain B, Crystal Struture Of A Nad(P)h-Dependent Fmn Reductase
Complexed With Fmn gi|52696277|pdb|1X77|A Chain A,
Crystal Struture Of A Nad(P)h-Dependent Fmn Reductase
Complexed With Fmn gi|52695408|pdb|1RTT|A Chain A,
Crystal Structure Determination Of A Putative Nadh-
Dependent Reductase Using Sulfur Anomalous Signal
Length = 193
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/85 (49%), Positives = 57/85 (66%), Gaps = 4/85 (4%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
IKV +SGS+R SY+S ++ AI L G+ IE DIS +P+YN D+ G +PP
Sbjct: 7 IKVLGISGSLRSGSYNSAALQEAIGL---VPPGMSIELADISGIPLYNEDVYALG-FPPA 62
Query: 66 VEAFRHKILQADSVLFASPEYNYSV 90
VE FR +I AD++LFA+PEYNYS+
Sbjct: 63 VERFREQIRAADALLFATPEYNYSM 87
>ref|ZP_00138805.1| COG0431: Predicted flavoprotein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 185
Score = 77.0 bits (188), Expect = 1e-13
Identities = 42/85 (49%), Positives = 57/85 (66%), Gaps = 4/85 (4%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
IKV +SGS+R SY+S ++ AI L G+ IE DIS +P+YN D+ G +PP
Sbjct: 5 IKVLGISGSLRSGSYNSAALQEAIGL---VPPGMSIELADISGIPLYNEDVYALG-FPPA 60
Query: 66 VEAFRHKILQADSVLFASPEYNYSV 90
VE FR +I AD++LFA+PEYNYS+
Sbjct: 61 VERFREQIRAADALLFATPEYNYSM 85
>ref|YP_023262.1| hypothetical FMN-reductase [Picrophilus torridus DSM 9790]
gi|48430204|gb|AAT43069.1| hypothetical FMN-reductase
[Picrophilus torridus DSM 9790]
Length = 183
Score = 72.8 bits (177), Expect = 2e-12
Identities = 37/86 (43%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 5 VIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPP 64
+I + + GS+RK SY+ L+ +E +K EG +++ +DIS LP YN D+EN +YP
Sbjct: 1 MINIVGIGGSLRKNSYNRYLM---LEAAKLMPEGSKLKILDISGLPFYNQDIEN--SYPE 55
Query: 65 LVEAFRHKILQADSVLFASPEYNYSV 90
V+ F+++I +D +LF +PEYNYSV
Sbjct: 56 NVKNFKNEIKNSDGILFVTPEYNYSV 81
>gb|AAK23515.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|16125783|ref|NP_420347.1| hypothetical protein
CC1536 [Caulobacter crescentus CB15]
gi|25349177|pir||G87439 conserved hypothetical protein
CC1536 [imported] - Caulobacter crescentus
Length = 179
Score = 70.9 bits (172), Expect = 8e-12
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
+K+ A+SGS+R SY++ L+RAA +L A EG+EIE + LP +N D+E EG PP+
Sbjct: 1 MKILAISGSLRAASYNTALLRAARDL---APEGVEIEIFRLHDLPFFNEDVEAEGDPPPV 57
Query: 66 VEAFRHKILQADSVLFASPEYNYSVT 91
V A++ + A ++L A PEYN +T
Sbjct: 58 V-AWKDAVRAAPALLIACPEYNGGLT 82
>emb|CAC47073.1| PUTATIVE OXIDOREDUCTASE PROTEIN [Sinorhizobium meliloti]
gi|15966247|ref|NP_386600.1| PUTATIVE OXIDOREDUCTASE
PROTEIN [Sinorhizobium meliloti 1021]
Length = 188
Score = 66.2 bits (160), Expect = 2e-10
Identities = 33/84 (39%), Positives = 53/84 (62%), Gaps = 3/84 (3%)
Query: 7 KVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPLV 66
K+ +SGS+RK S+++ L++AA + A +G+E E + +P+Y+ D+E E P
Sbjct: 6 KLLGISGSLRKASFNTALLKAAQAV---APDGVEFETATLHGIPLYDGDVEAESGVPAAA 62
Query: 67 EAFRHKILQADSVLFASPEYNYSV 90
EA + KI+ AD V+ +PEYN SV
Sbjct: 63 EALKQKIVAADGVILFTPEYNNSV 86
>ref|ZP_00307212.1| COG0431: Predicted flavoprotein [Ferroplasma acidarmanus]
Length = 184
Score = 65.5 bits (158), Expect = 3e-10
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
IK+A GS+RK SY L+ A+ L E ++E +DI P+ N D EN YP
Sbjct: 4 IKIAGFGGSLRKESYSRYLLENAVGLMP---ENSKLELLDIKNFPLMNQDEENN--YPEN 58
Query: 66 VEAFRHKILQADSVLFASPEYNYSV 90
V+ F+ +I ++D VL +PEYNYS+
Sbjct: 59 VKKFKRQIKESDGVLMVTPEYNYSI 83
>ref|ZP_00310316.1| COG0431: Predicted flavoprotein [Cytophaga hutchinsonii]
Length = 189
Score = 65.5 bits (158), Expect = 3e-10
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
IK++A SGS+RK SY + LI A L K A E I + IDI LP+ N DLE + P
Sbjct: 4 IKISAFSGSLRKESYTTKLIHA---LQKSAPESISVMRIDIGNLPLINEDLEAD--LPQA 58
Query: 66 VEAFRHKILQADSVLFASPEYNYS 89
V+ + I ++D+ +FA+PEYN S
Sbjct: 59 VKDLHNSIKESDAFIFATPEYNRS 82
>ref|ZP_00152370.2| COG0431: Predicted flavoprotein [Dechloromonas aromatica RCB]
Length = 192
Score = 65.5 bits (158), Expect = 3e-10
Identities = 34/87 (39%), Positives = 54/87 (61%), Gaps = 5/87 (5%)
Query: 4 AVIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYP 63
A + + + GS+RK SY+ ++AA EL EG+ ++ D+ +P++N D E P
Sbjct: 2 ATLNILGIVGSLRKNSYNGFALKAAQEL---LPEGVTLDIADLQGIPVFNQD--EEMAPP 56
Query: 64 PLVEAFRHKILQADSVLFASPEYNYSV 90
V F+ KI+ AD++LFA+PEYNYS+
Sbjct: 57 AAVLEFKQKIIAADAILFATPEYNYSL 83
>ref|ZP_00006669.2| COG0431: Predicted flavoprotein [Rhodobacter sphaeroides 2.4.1]
Length = 185
Score = 64.3 bits (155), Expect = 7e-10
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 7 KVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPLV 66
++ L+GS+R+ S+++GL+RAA EL A G+E+E I+ +P+Y+ DLE E P V
Sbjct: 3 RIFGLAGSLRRASFNAGLLRAAAEL---APAGVEVEVHSIADVPIYDGDLEAETGLPEAV 59
Query: 67 EAFRHKILQADSVLFASPEYNYSV 90
+ + AD++L +PEYN +
Sbjct: 60 VRLQEGLAAADALLLVTPEYNNGI 83
>gb|AAN69721.1| conserved hypothetical protein [Pseudomonas putida KT2440]
gi|26990832|ref|NP_746257.1| hypothetical protein
PP4138 [Pseudomonas putida KT2440]
gi|14209682|gb|AAK56853.1| chromate reductase
[Pseudomonas putida]
Length = 186
Score = 63.5 bits (153), Expect = 1e-09
Identities = 36/86 (41%), Positives = 53/86 (60%), Gaps = 4/86 (4%)
Query: 5 VIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPP 64
V VA + GS+RK SY+ + RA EL A + ++ ++I LP+YN D+E E P
Sbjct: 4 VYSVAVVVGSLRKESYNRKVARALSEL---APSSLALKIVEIGDLPLYNEDIEAEAP-PE 59
Query: 65 LVEAFRHKILQADSVLFASPEYNYSV 90
+ FR +I ++D+VLF +PEYN SV
Sbjct: 60 TWKRFRDEIRRSDAVLFVTPEYNRSV 85
>gb|AAK56852.1| chromate reductase [Pseudomonas putida]
Length = 186
Score = 61.6 bits (148), Expect = 5e-09
Identities = 35/86 (40%), Positives = 53/86 (60%), Gaps = 4/86 (4%)
Query: 5 VIKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPP 64
V VA + GS+RK SY+ + RA EL A + ++ ++I LP+YN D+E E P
Sbjct: 4 VYSVAVVVGSLRKESYNRKVARALSEL---APSSLALKIVEIGDLPLYNEDVEAEAP-PE 59
Query: 65 LVEAFRHKILQADSVLFASPEYNYSV 90
+ FR +I ++D+VLF +PE+N SV
Sbjct: 60 AWKRFREEIRRSDAVLFVTPEHNRSV 85
>ref|ZP_00166972.2| COG0431: Predicted flavoprotein [Ralstonia eutropha JMP134]
Length = 187
Score = 61.6 bits (148), Expect = 5e-09
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 8 VAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPLVE 67
VA L GS+RK S+ L +A I L A + +++E ++I L +YN DL+ + P
Sbjct: 7 VAVLVGSLRKESFSRKLAKALIAL---APQPLKLEIVEIGNLQLYNQDLD--ASPPAEWT 61
Query: 68 AFRHKILQADSVLFASPEYNYSV 90
AFR +I +ADSVLF +PEYN SV
Sbjct: 62 AFRDRIRRADSVLFVTPEYNRSV 84
>ref|NP_691959.1| chromate reductase [Oceanobacillus iheyensis HTE831]
gi|22776719|dbj|BAC12994.1| chromate reductase
[Oceanobacillus iheyensis HTE831]
Length = 181
Score = 60.8 bits (146), Expect = 8e-09
Identities = 35/86 (40%), Positives = 52/86 (59%), Gaps = 5/86 (5%)
Query: 6 IKVAALSGSIRKVSYHSGLIRAAIELSKGATEGIEIEFIDISTLPMYNTDLENEGTYPPL 65
+K+AAL GS RK SY+ L++ E G ++I+ + I LP YN D E + P +
Sbjct: 1 MKIAALVGSNRKDSYNKLLVKYMKEKYAGK---LDIDILPIDELPFYNQDKEMDP--PAI 55
Query: 66 VEAFRHKILQADSVLFASPEYNYSVT 91
VE R +I +D +LFA+PEYN S++
Sbjct: 56 VEDLRERIKNSDGILFATPEYNASIS 81
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.133 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,498,814
Number of Sequences: 2540612
Number of extensions: 4668550
Number of successful extensions: 10457
Number of sequences better than 10.0: 195
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 10251
Number of HSP's gapped (non-prelim): 195
length of query: 92
length of database: 863,360,394
effective HSP length: 68
effective length of query: 24
effective length of database: 690,598,778
effective search space: 16574370672
effective search space used: 16574370672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC121234.11