BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149581.10 + phase: 2 /partial
(349 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15890 protein kinase, putative 327 6e-90
At1g52540 unknown protein 318 4e-87
At1g01540 unknown protein 259 1e-69
At1g56720 protein kinase, putative 259 2e-69
At3g59110 receptor-like protein kinase 258 3e-69
At3g24550 protein kinase, putative 258 3e-69
At2g42960 putative protein kinase 258 4e-69
At1g60800 Putative Serine/Threonine protein kinase 258 4e-69
At3g18810 protein kinase, putative 255 3e-68
At1g68690 protein kinase, putative 255 3e-68
At1g09440 putative ser/thr protein kinase 255 3e-68
At5g45780 receptor-like protein kinase 253 8e-68
At4g32710 putative protein kinase 253 1e-67
At4g34440 serine/threonine protein kinase - like 252 2e-67
At3g24540 protein kinase, putative 252 2e-67
At4g33430 somatic embryogenesis receptor-like kinase 3 (SERK3) 251 3e-67
At3g24400 protein kinase, putative 251 3e-67
At1g70460 putative protein kinase 251 4e-67
At4g34500 serine/threonine protein kinase like protein 250 7e-67
At3g17420 serine/threonine protein kinase, putative 250 7e-67
>At3g15890 protein kinase, putative
Length = 361
Score = 327 bits (838), Expect = 6e-90
Identities = 169/350 (48%), Positives = 238/350 (67%), Gaps = 8/350 (2%)
Query: 3 DDKKNIRDYP-WERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTM 61
D KK ++ P W ++LKEL ATN+F+ DNK+GEG FGSVYWGQ G +IAVKRLK
Sbjct: 13 DGKKKEKEEPSWRVFSLKELHAATNSFNYDNKLGEGRFGSVYWGQLWDGSQIAVKRLKEW 72
Query: 62 TAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDC 121
+ + E++FAVEVE+L R+RHKNLL +RG+ A G ERL+VY+YM N SL++HLHGQ +++C
Sbjct: 73 SNREEIDFAVEVEILARIRHKNLLSVRGYCAEGQERLLVYEYMQNLSLVSHLHGQHSAEC 132
Query: 122 LLDWPRRMSITVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIP- 180
LLDW +RM I + +A+ +AYLH A PHI+H D++ASNVLLD+EF+A+V DFG+ KL+P
Sbjct: 133 LLDWTKRMKIAISSAQAIAYLHDHATPHIVHGDVRASNVLLDSEFEARVTDFGYGKLMPD 192
Query: 181 AGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRD 240
T+ K GY++PE GK SE+ DVYSFGILL+ ++S K+P+E+L R
Sbjct: 193 DDTGDGATKAKSNNGYISPECDASGKESETSDVYSFGILLMVLVSGKRPLERLNPTTTRC 252
Query: 241 IVQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK 300
I +WV P V + F I D +L E+LK V+++ + C + PDKRP+M EVVE L
Sbjct: 253 ITEWVLPLVYERNFGEIVDKRLSEEHVAEKLKKVVLVGLMCAQTDPDKRPTMSEVVEML- 311
Query: 301 DGVSKRKKEIPNLSNNK--GHDEENDENYEEFVTMQSNNLKILSDNDRRK 348
V++ K++I L N + ++EN E V +S+++ IL D D ++
Sbjct: 312 --VNESKEKISELEANPLFKNPYSSNENNREHVAEESSDV-ILEDKDHQQ 358
>At1g52540 unknown protein
Length = 350
Score = 318 bits (814), Expect = 4e-87
Identities = 160/323 (49%), Positives = 226/323 (69%), Gaps = 5/323 (1%)
Query: 3 DDKKNIRDYP-WERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTM 61
D +K ++ P W ++LKEL ATN+F+ DNK+GEG FGSVYWGQ G +IAVKRLK
Sbjct: 14 DRQKKVKTEPSWRIFSLKELHAATNSFNYDNKLGEGRFGSVYWGQLWDGSQIAVKRLKAW 73
Query: 62 TAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDC 121
+++ E++FAVEVE+L R+RHKNLL +RG+ A G ERLIVYDYM N SL++HLHGQ +S+
Sbjct: 74 SSREEIDFAVEVEILARIRHKNLLSVRGYCAEGQERLIVYDYMPNLSLVSHLHGQHSSES 133
Query: 122 LLDWPRRMSITVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPA 181
LLDW RRM+I V +A+ +AYLHH A P I+H D++ASNVLLD+EF+A+V DFG+ KL+P
Sbjct: 134 LLDWTRRMNIAVSSAQAIAYLHHFATPRIVHGDVRASNVLLDSEFEARVTDFGYDKLMPD 193
Query: 182 GVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDI 241
++ +T+ +GYL+PE GK S+ DVYSFG+LLLE+++ K+P E++ KR I
Sbjct: 194 DGANKSTK-GNNIGYLSPECIESGKESDMGDVYSFGVLLLELVTGKRPTERVNLTTKRGI 252
Query: 242 VQWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKD 301
+WV P V + F I D +L G + E+LK ++++ + C +KRP+M EVVE L
Sbjct: 253 TEWVLPLVYERKFGEIVDQRLNGKYVEEELKRIVLVGLMCAQRESEKRPTMSEVVEML-- 310
Query: 302 GVSKRKKEIPNLSNNKGHDEEND 324
+ + K+++ L N + ND
Sbjct: 311 -MIESKEKMAQLEANPLFNGNND 332
>At1g01540 unknown protein
Length = 472
Score = 259 bits (663), Expect = 1e-69
Identities = 131/289 (45%), Positives = 189/289 (65%), Gaps = 1/289 (0%)
Query: 13 WER-YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAV 71
W R YTL+EL ATN ++N IGEGG+G VY G + G ++AVK L +AE EF V
Sbjct: 138 WGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKV 197
Query: 72 EVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSI 131
EVEV+GRVRHKNL+ L G+ G R++VYD++ N +L +HG + L W RM+I
Sbjct: 198 EVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNI 257
Query: 132 TVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVK 191
+G A+GLAYLH P ++HRDIK+SN+LLD ++ AKV+DFG AKL+ + S++TTRV
Sbjct: 258 ILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVM 317
Query: 192 GTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQK 251
GT GY+APEYA G ++E D+YSFGIL++EII+ + P++ + ++V W+ V
Sbjct: 318 GTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGN 377
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK 300
+ + DPK+ + LK V+++A+RC D +KRP M ++ L+
Sbjct: 378 RRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426
>At1g56720 protein kinase, putative
Length = 492
Score = 259 bits (662), Expect = 2e-69
Identities = 126/285 (44%), Positives = 183/285 (64%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+TL++L ATN F ++N IGEGG+G VY G+ G +AVK++ +AE EF VEV+
Sbjct: 167 FTLRDLETATNRFSKENVIGEGGYGVVYRGELMNGTPVAVKKILNQLGQAEKEFRVEVDA 226
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+G VRHKNL+ L G+ G R++VY+Y++N +L LHG + L W RM + +G
Sbjct: 227 IGHVRHKNLVRLLGYCIEGTHRILVYEYVNNGNLEQWLHGAMRQHGYLTWEARMKVLIGT 286
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
++ LAYLH P ++HRDIK+SN+L++ EF AKV+DFG AKL+ AG SH+TTRV GT G
Sbjct: 287 SKALAYLHEAIEPKVVHRDIKSSNILINDEFNAKVSDFGLAKLLGAGKSHVTTRVMGTFG 346
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFK 255
Y+APEYA G ++E DVYSFG++LLE I+ + P++ + ++V W+ V +
Sbjct: 347 YVAPEYANSGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAHEVNLVDWLKMMVGTRRSE 406
Query: 256 HIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK 300
+ DP ++ LK ++ A+RC D DKRP M +VV L+
Sbjct: 407 EVVDPNIEVKPPTRSLKRALLTALRCVDPDSDKRPKMSQVVRMLE 451
>At3g59110 receptor-like protein kinase
Length = 512
Score = 258 bits (660), Expect = 3e-69
Identities = 129/297 (43%), Positives = 188/297 (62%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+TL++L ATN F +N IGEGG+G VY G+ G ++AVK+L +AE EF VEVE
Sbjct: 178 FTLRDLQLATNRFAAENVIGEGGYGVVYKGRLINGNDVAVKKLLNNLGQAEKEFRVEVEA 237
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+G VRHKNL+ L G+ G R++VY+Y+++ +L LHG + L W RM I VG
Sbjct: 238 IGHVRHKNLVRLLGYCIEGVNRMLVYEYVNSGNLEQWLHGAMGKQSTLTWEARMKILVGT 297
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+ LAYLH P ++HRDIKASN+L+D +F AK++DFG AKL+ +G SH+TTRV GT G
Sbjct: 298 AQALAYLHEAIEPKVVHRDIKASNILIDDDFNAKLSDFGLAKLLDSGESHITTRVMGTFG 357
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFK 255
Y+APEYA G ++E D+YSFG+LLLE I+ + P++ + ++V+W+ V +
Sbjct: 358 YVAPEYANTGLLNEKSDIYSFGVLLLETITGRDPVDYERPANEVNLVEWLKMMVGTRRAE 417
Query: 256 HIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVSKRKKEIPN 312
+ D +++ LK +++A+RC D KRP M +VV L+ ++E N
Sbjct: 418 EVVDSRIEPPPATRALKRALLVALRCVDPEAQKRPKMSQVVRMLESDEHPFREERRN 474
>At3g24550 protein kinase, putative
Length = 652
Score = 258 bits (660), Expect = 3e-69
Identities = 127/293 (43%), Positives = 195/293 (66%), Gaps = 6/293 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+T +EL RATN F + N +G+GGFG V+ G G E+AVK+LK + + E EF EVE+
Sbjct: 268 FTYEELSRATNGFSEANLLGQGGFGYVHKGILPSGKEVAVKQLKAGSGQGEREFQAEVEI 327
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+ RV H++L+ L G+ G +RL+VY+++ N++L HLHG+ ++W R+ I +G+
Sbjct: 328 ISRVHHRHLVSLIGYCMAGVQRLLVYEFVPNNNLEFHLHGK--GRPTMEWSTRLKIALGS 385
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+GL+YLH + NP IIHRDIKASN+L+D +F+AKVADFG AK+ +H++TRV GT G
Sbjct: 386 AKGLSYLHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVSTRVMGTFG 445
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYV----QK 251
YLAPEYA GK++E DV+SFG++LLE+I+ ++P++ + +V W P + ++
Sbjct: 446 YLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWARPLLNRASEE 505
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVS 304
G F+ +AD K+ +D E++ ++ A C S +RP M ++V L+ VS
Sbjct: 506 GDFEGLADSKMGNEYDREEMARMVACAAACVRHSARRRPRMSQIVRALEGNVS 558
>At2g42960 putative protein kinase
Length = 494
Score = 258 bits (658), Expect = 4e-69
Identities = 130/297 (43%), Positives = 186/297 (61%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+TL++L ATN F N +GEGG+G VY G+ G E+AVK+L +AE EF VEVE
Sbjct: 171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEA 230
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+G VRHKNL+ L G+ G R++VY+Y+++ +L LHG + L W RM I G
Sbjct: 231 IGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGT 290
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+ LAYLH P ++HRDIKASN+L+D EF AK++DFG AKL+ +G SH+TTRV GT G
Sbjct: 291 AQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFG 350
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFK 255
Y+APEYA G ++E D+YSFG+LLLE I+ + P++ + ++V+W+ V +
Sbjct: 351 YVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAE 410
Query: 256 HIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVSKRKKEIPN 312
+ DP+L+ LK +++++RC D +KRP M +V L+ KE N
Sbjct: 411 EVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDEHPFHKERRN 467
>At1g60800 Putative Serine/Threonine protein kinase
Length = 632
Score = 258 bits (658), Expect = 4e-69
Identities = 133/302 (44%), Positives = 191/302 (63%), Gaps = 3/302 (0%)
Query: 14 ERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMT-AKAEMEFAVE 72
+RYT KEL ATN+F+ N +G GG+G VY G + G +AVKRLK A E++F E
Sbjct: 287 KRYTFKELRSATNHFNSKNILGRGGYGIVYKGHLNDGTLVAVKRLKDCNIAGGEVQFQTE 346
Query: 73 VEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSIT 132
VE + H+NLL LRGF + ER++VY YM N S+ + L + + LDW RR I
Sbjct: 347 VETISLALHRNLLRLRGFCSSNQERILVYPYMPNGSVASRLKDNIRGEPALDWSRRKKIA 406
Query: 133 VGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKG 192
VG A GL YLH + +P IIHRD+KA+N+LLD +F+A V DFG AKL+ SH+TT V+G
Sbjct: 407 VGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRG 466
Query: 193 TLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDI-VQWVTPYVQK 251
T+G++APEY G+ SE DV+ FGILLLE+I+ +K ++ ++ + + WV Q+
Sbjct: 467 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRSAHQKGVMLDWVKKLHQE 526
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK-DGVSKRKKEI 310
G K + D L FD +L+ ++ +A+ CT +P RP M EV++ L+ DG+++R +
Sbjct: 527 GKLKQLIDKDLNDKFDRVELEEIVQVALLCTQFNPSHRPKMSEVMKMLEGDGLAERWEAT 586
Query: 311 PN 312
N
Sbjct: 587 QN 588
>At3g18810 protein kinase, putative
Length = 700
Score = 255 bits (651), Expect = 3e-68
Identities = 125/289 (43%), Positives = 188/289 (64%), Gaps = 7/289 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+T EL AT F Q +G+GGFG V+ G G EIAVK LK + + E EF EV++
Sbjct: 325 FTYDELAAATQGFSQSRLLGQGGFGYVHKGILPNGKEIAVKSLKAGSGQGEREFQAEVDI 384
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+ RV H+ L+ L G+ G +R++VY+++ N +L HLHG+ S +LDWP R+ I +G+
Sbjct: 385 ISRVHHRFLVSLVGYCIAGGQRMLVYEFLPNDTLEFHLHGK--SGKVLDWPTRLKIALGS 442
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+GLAYLH + +P IIHRDIKASN+LLD F+AKVADFG AKL V+H++TR+ GT G
Sbjct: 443 AKGLAYLHEDCHPRIIHRDIKASNILLDESFEAKVADFGLAKLSQDNVTHVSTRIMGTFG 502
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPY----VQK 251
YLAPEYA GK+++ DV+SFG++LLE+++ ++P++ L G ++ +V W P Q
Sbjct: 503 YLAPEYASSGKLTDRSDVFSFGVMLLELVTGRRPVD-LTGEMEDSLVDWARPICLNAAQD 561
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK 300
G + + DP+L+ ++ ++ ++ A S +RP M ++V L+
Sbjct: 562 GDYSELVDPRLENQYEPHEMAQMVACAAAAVRHSARRRPKMSQIVRALE 610
>At1g68690 protein kinase, putative
Length = 708
Score = 255 bits (651), Expect = 3e-68
Identities = 128/285 (44%), Positives = 184/285 (63%), Gaps = 7/285 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
++ +EL++ATN F Q+N +GEGGFG VY G G +AVK+LK + + EF EVE
Sbjct: 365 FSYEELVKATNGFSQENLLGEGGFGCVYKGILPDGRVVAVKQLKIGGGQGDREFKAEVET 424
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
L R+ H++L+ + G GD RL++YDY+SN+ L HLHG+ + +LDW R+ I GA
Sbjct: 425 LSRIHHRHLVSIVGHCISGDRRLLIYDYVSNNDLYFHLHGEKS---VLDWATRVKIAAGA 481
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A GLAYLH + +P IIHRDIK+SN+LL+ F A+V+DFG A+L +H+TTRV GT G
Sbjct: 482 ARGLAYLHEDCHPRIIHRDIKSSNILLEDNFDARVSDFGLARLALDCNTHITTRVIGTFG 541
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGV-- 253
Y+APEYA GK++E DV+SFG++LLE+I+ +KP++ +V+W P + +
Sbjct: 542 YMAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLISHAIET 601
Query: 254 --FKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVV 296
F +ADPKL GN+ ++ +I A C KRP M ++V
Sbjct: 602 EEFDSLADPKLGGNYVESEMFRMIEAAGACVRHLATKRPRMGQIV 646
>At1g09440 putative ser/thr protein kinase
Length = 482
Score = 255 bits (651), Expect = 3e-68
Identities = 137/335 (40%), Positives = 200/335 (58%), Gaps = 9/335 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+TL++L ATN F ++N IGEGG+G VY G+ G +AVK++ +AE EF VEV+
Sbjct: 145 FTLRDLEIATNRFSKENVIGEGGYGVVYRGELVNGSLVAVKKILNHLGQAEKEFRVEVDA 204
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+G VRHKNL+ L G+ G R++VY+YM+N +L LHG + L W RM + G
Sbjct: 205 IGHVRHKNLVRLLGYCIEGTNRILVYEYMNNGNLEEWLHGAMKHHGYLTWEARMKVLTGT 264
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
++ LAYLH P ++HRDIK+SN+L+D F AK++DFG AKL+ G SH+TTRV GT G
Sbjct: 265 SKALAYLHEAIEPKVVHRDIKSSNILIDDRFNAKISDFGLAKLLGDGKSHVTTRVMGTFG 324
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFK 255
Y+APEYA G ++E DVYSFG+L+LE I+ + P++ + ++V+W+ V +
Sbjct: 325 YVAPEYANTGLLNEKSDVYSFGVLVLEAITGRDPVDYARPANEVNLVEWLKMMVGSKRLE 384
Query: 256 HIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWL--KDGVSKRKKEIPNL 313
+ DP + LK V++ A+RC D +KRP M +VV L ++ R+K + L
Sbjct: 385 EVIDPNIAVRPATRALKRVLLTALRCIDPDSEKRPKMSQVVRMLESEEYPVPREKSMQKL 444
Query: 314 SNNKGHDEENDENYEEFVTMQSNNLKILSDNDRRK 348
+K E N + T + N SD DR +
Sbjct: 445 YKHK--QEFNLQERRVRRTQEEN-----SDTDRSR 472
>At5g45780 receptor-like protein kinase
Length = 570
Score = 253 bits (647), Expect = 8e-68
Identities = 138/327 (42%), Positives = 200/327 (60%), Gaps = 12/327 (3%)
Query: 9 RDYPWE-----RYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTA 63
+DY +E R++ +E+ AT+NF N +G+GGFG VY G G +AVKRLK
Sbjct: 232 QDYEFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIY 291
Query: 64 KAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLL 123
E++F EVE++G H+NLL L GF +ER++VY YM N S+ L L
Sbjct: 292 TGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSL 351
Query: 124 DWPRRMSITVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGV 183
DW RR+SI +GAA GL YLH + NP IIHRD+KA+N+LLD F+A V DFG AKL+
Sbjct: 352 DWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRD 411
Query: 184 SHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRD-IV 242
SH+TT V+GT+G++APEY G+ SE DV+ FG+L+LE+I+ K I++ G +++ I+
Sbjct: 412 SHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMIL 471
Query: 243 QWVTPYVQKGVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDG 302
WV + F + D LKG FD L+ V+ +A+ CT P+ RP M +V++ L+
Sbjct: 472 SWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGL 531
Query: 303 VSK----RKKEIPNLSNN--KGHDEEN 323
V + + P++S N GH+E++
Sbjct: 532 VEQCEGGYEARAPSVSRNYSNGHEEQS 558
>At4g32710 putative protein kinase
Length = 731
Score = 253 bits (645), Expect = 1e-67
Identities = 134/311 (43%), Positives = 195/311 (62%), Gaps = 10/311 (3%)
Query: 6 KNIRDYPWERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKA 65
KNI P ++ +EL +AT F ++N +GEGGFG V+ G G E+AVK+LK + +
Sbjct: 368 KNI-SMPSGMFSYEELSKATGGFSEENLLGEGGFGYVHKGVLKNGTEVAVKQLKIGSYQG 426
Query: 66 EMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDW 125
E EF EV+ + RV HK+L+ L G+ GD+RL+VY+++ +L HLH S +L+W
Sbjct: 427 EREFQAEVDTISRVHHKHLVSLVGYCVNGDKRLLVYEFVPKDTLEFHLHENRGS--VLEW 484
Query: 126 PRRMSITVGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIP---AG 182
R+ I VGAA+GLAYLH + +P IIHRDIKA+N+LLD++F+AKV+DFG AK +
Sbjct: 485 EMRLRIAVGAAKGLAYLHEDCSPTIIHRDIKAANILLDSKFEAKVSDFGLAKFFSDTNSS 544
Query: 183 VSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIV 242
+H++TRV GT GY+APEYA GKV++ DVYSFG++LLE+I+ + I + +V
Sbjct: 545 FTHISTRVVGTFGYMAPEYASSGKVTDKSDVYSFGVVLLELITGRPSIFAKDSSTNQSLV 604
Query: 243 QWVTPYVQKGV----FKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEW 298
W P + K + F + D +L+ N+D Q+ ++ A C S RP M +VV
Sbjct: 605 DWARPLLTKAISGESFDFLVDSRLEKNYDTTQMANMAACAAACIRQSAWLRPRMSQVVRA 664
Query: 299 LKDGVSKRKKE 309
L+ V+ RK E
Sbjct: 665 LEGEVALRKVE 675
>At4g34440 serine/threonine protein kinase - like
Length = 670
Score = 252 bits (644), Expect = 2e-67
Identities = 128/293 (43%), Positives = 189/293 (63%), Gaps = 7/293 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+T EL AT F Q N +G+GGFG V+ G G E+AVK LK + + E EF EV++
Sbjct: 300 FTYDELSIATEGFAQSNLLGQGGFGYVHKGVLPSGKEVAVKSLKLGSGQGEREFQAEVDI 359
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+ RV H++L+ L G+ G +RL+VY+++ N++L HLHG+ +LDWP R+ I +G+
Sbjct: 360 ISRVHHRHLVSLVGYCISGGQRLLVYEFIPNNTLEFHLHGK--GRPVLDWPTRVKIALGS 417
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A GLAYLH + +P IIHRDIKA+N+LLD F+ KVADFG AKL +H++TRV GT G
Sbjct: 418 ARGLAYLHEDCHPRIIHRDIKAANILLDFSFETKVADFGLAKLSQDNYTHVSTRVMGTFG 477
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPY----VQK 251
YLAPEYA GK+S+ DV+SFG++LLE+I+ + P++ L G ++ +V W P Q
Sbjct: 478 YLAPEYASSGKLSDKSDVFSFGVMLLELITGRPPLD-LTGEMEDSLVDWARPLCLKAAQD 536
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVS 304
G + +ADP+L+ N+ +++ + A S +RP M ++V L+ +S
Sbjct: 537 GDYNQLADPRLELNYSHQEMVQMASCAAAAIRHSARRRPKMSQIVRALEGDMS 589
>At3g24540 protein kinase, putative
Length = 509
Score = 252 bits (644), Expect = 2e-67
Identities = 126/293 (43%), Positives = 191/293 (65%), Gaps = 6/293 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+T EL RATN F + N +GEGGFG VY G + G E+AVK+LK +A+ E EF EV +
Sbjct: 167 FTYGELARATNKFSEANLLGEGGFGFVYKGILNNGNEVAVKQLKVGSAQGEKEFQAEVNI 226
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+ ++ H+NL+ L G+ G +RL+VY+++ N++L HLHG+ ++W R+ I V +
Sbjct: 227 ISQIHHRNLVSLVGYCIAGAQRLLVYEFVPNNTLEFHLHGK--GRPTMEWSLRLKIAVSS 284
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
++GL+YLH NP IIHRDIKA+N+L+D +F+AKVADFG AK+ +H++TRV GT G
Sbjct: 285 SKGLSYLHENCNPKIIHRDIKAANILIDFKFEAKVADFGLAKIALDTNTHVSTRVMGTFG 344
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPY----VQK 251
YLAPEYA GK++E DVYSFG++LLE+I+ ++P++ +V W P +++
Sbjct: 345 YLAPEYAASGKLTEKSDVYSFGVVLLELITGRRPVDANNVYADDSLVDWARPLLVQALEE 404
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVS 304
F+ +AD KL +D E++ ++ A C + +RP M +VV L+ +S
Sbjct: 405 SNFEGLADIKLNNEYDREEMARMVACAAACVRYTARRRPRMDQVVRVLEGNIS 457
>At4g33430 somatic embryogenesis receptor-like kinase 3 (SERK3)
Length = 615
Score = 251 bits (642), Expect = 3e-67
Identities = 132/300 (44%), Positives = 198/300 (66%), Gaps = 4/300 (1%)
Query: 14 ERYTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKT-MTAKAEMEFAVE 72
+R++L+EL A++NF N +G GGFG VY G+ + G +AVKRLK T E++F E
Sbjct: 275 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTE 334
Query: 73 VEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSIT 132
VE++ H+NLL LRGF ERL+VY YM+N S+ + L + S LDWP+R I
Sbjct: 335 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 394
Query: 133 VGAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKG 192
+G+A GLAYLH +P IIHRD+KA+N+LLD EF+A V DFG AKL+ +H+TT V+G
Sbjct: 395 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRG 454
Query: 193 TLGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIE--KLPGGIKRDIVQWVTPYVQ 250
T+G++APEY GK SE DV+ +G++LLE+I+ ++ + +L ++ WV ++
Sbjct: 455 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 514
Query: 251 KGVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK-DGVSKRKKE 309
+ + + D L+GN+ E+++ +I +A+ CT SSP +RP M EVV L+ DG+++R +E
Sbjct: 515 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEE 574
>At3g24400 protein kinase, putative
Length = 694
Score = 251 bits (642), Expect = 3e-67
Identities = 125/293 (42%), Positives = 189/293 (63%), Gaps = 6/293 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+ +EL RATN F + N +G+GGFG V+ G G E+AVK+LK +++ E EF EV +
Sbjct: 319 FNYEELSRATNGFSEANLLGQGGFGYVFKGMLRNGKEVAVKQLKEGSSQGEREFQAEVGI 378
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+ RV H++L+ L G+ +RL+VY+++ N++L HLHG+ ++W R+ I VG+
Sbjct: 379 ISRVHHRHLVALVGYCIADAQRLLVYEFVPNNTLEFHLHGK--GRPTMEWSSRLKIAVGS 436
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+GL+YLH NP IIHRDIKASN+L+D +F+AKVADFG AK+ +H++TRV GT G
Sbjct: 437 AKGLSYLHENCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVSTRVMGTFG 496
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQK---- 251
YLAPEYA GK++E DV+SFG++LLE+I+ ++PI+ +V W P + +
Sbjct: 497 YLAPEYASSGKLTEKSDVFSFGVVLLELITGRRPIDVNNVHADNSLVDWARPLLNQVSEL 556
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDGVS 304
G F+ + D KL +D E++ ++ A C S+ +RP M +V L+ +S
Sbjct: 557 GNFEVVVDKKLNNEYDKEEMARMVACAAACVRSTAPRRPRMDQVARVLEGNIS 609
>At1g70460 putative protein kinase
Length = 710
Score = 251 bits (641), Expect = 4e-67
Identities = 125/288 (43%), Positives = 191/288 (65%), Gaps = 6/288 (2%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+T +EL T F + N +GEGGFG VY G+ + G +AVK+LK + + + EF EVE+
Sbjct: 341 FTYEELTDITEGFSKHNILGEGGFGCVYKGKLNDGKLVAVKQLKVGSGQGDREFKAEVEI 400
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+ RV H++L+ L G+ ERL++Y+Y+ N +L HLHG+ +L+W RR+ I +G+
Sbjct: 401 ISRVHHRHLVSLVGYCIADSERLLIYEYVPNQTLEHHLHGK--GRPVLEWARRVRIAIGS 458
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+GLAYLH + +P IIHRDIK++N+LLD EF+A+VADFG AKL + +H++TRV GT G
Sbjct: 459 AKGLAYLHEDCHPKIIHRDIKSANILLDDEFEAQVADFGLAKLNDSTQTHVSTRVMGTFG 518
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQK---- 251
YLAPEYA GK+++ DV+SFG++LLE+I+ +KP+++ + +V+W P + K
Sbjct: 519 YLAPEYAQSGKLTDRSDVFSFGVVLLELITGRKPVDQYQPLGEESLVEWARPLLHKAIET 578
Query: 252 GVFKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWL 299
G F + D +L+ ++ ++ +I A C S KRP M++VV L
Sbjct: 579 GDFSELVDRRLEKHYVENEVFRMIETAAACVRHSGPKRPRMVQVVRAL 626
>At4g34500 serine/threonine protein kinase like protein
Length = 437
Score = 250 bits (639), Expect = 7e-67
Identities = 127/287 (44%), Positives = 181/287 (62%), Gaps = 2/287 (0%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
Y+LK+L AT F DN IGEGG+G VY S G AVK L +AE EF VEVE
Sbjct: 133 YSLKDLEIATRGFSDDNMIGEGGYGVVYRADFSDGSVAAVKNLLNNKGQAEKEFKVEVEA 192
Query: 76 LGRVRHKNLLGLRGFYAGG--DERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITV 133
+G+VRHKNL+GL G+ A +R++VY+Y+ N +L LHG + L W RM I +
Sbjct: 193 IGKVRHKNLVGLMGYCADSAQSQRMLVYEYIDNGNLEQWLHGDVGPVSPLTWDIRMKIAI 252
Query: 134 GAAEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGT 193
G A+GLAYLH P ++HRD+K+SN+LLD ++ AKV+DFG AKL+ + S++TTRV GT
Sbjct: 253 GTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSETSYVTTRVMGT 312
Query: 194 LGYLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGV 253
GY++PEYA G ++E DVYSFG+LL+EII+ + P++ + ++V W V
Sbjct: 313 FGYVSPEYASTGMLNECSDVYSFGVLLMEIITGRSPVDYSRPPGEMNLVDWFKGMVASRR 372
Query: 254 FKHIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLK 300
+ + DPK+K + LK +++ +RC D KRP M +++ L+
Sbjct: 373 GEEVIDPKIKTSPPPRALKRALLVCLRCIDLDSSKRPKMGQIIHMLE 419
>At3g17420 serine/threonine protein kinase, putative
Length = 467
Score = 250 bits (639), Expect = 7e-67
Identities = 126/321 (39%), Positives = 197/321 (61%), Gaps = 4/321 (1%)
Query: 16 YTLKELLRATNNFHQDNKIGEGGFGSVYWGQTSKGVEIAVKRLKTMTAKAEMEFAVEVEV 75
+TL++L ATN+F +++ IG+GG+G VY G + +AVK+L +A+ +F VEVE
Sbjct: 142 FTLRDLQLATNHFSKESIIGDGGYGVVYHGTLTNKTPVAVKKLLNNPGQADKDFRVEVEA 201
Query: 76 LGRVRHKNLLGLRGFYAGGDERLIVYDYMSNHSLLTHLHGQLASDCLLDWPRRMSITVGA 135
+G VRHKNL+ L G+ G R++VY+YM+N +L LHG + L W R+ + VG
Sbjct: 202 IGHVRHKNLVRLLGYCVEGTHRMLVYEYMNNGNLEQWLHGDMIHKGHLTWEARIKVLVGT 261
Query: 136 AEGLAYLHHEANPHIIHRDIKASNVLLDTEFQAKVADFGFAKLIPAGVSHLTTRVKGTLG 195
A+ LAYLH P ++HRDIK+SN+L+D F AK++DFG AKL+ A ++++TRV GT G
Sbjct: 262 AKALAYLHEAIEPKVVHRDIKSSNILMDDNFDAKLSDFGLAKLLGADSNYVSTRVMGTFG 321
Query: 196 YLAPEYAMWGKVSESCDVYSFGILLLEIISAKKPIEKLPGGIKRDIVQWVTPYVQKGVFK 255
Y+APEYA G ++E DVYS+G++LLE I+ + P++ + +V+W+ VQ+ F+
Sbjct: 322 YVAPEYANSGLLNEKSDVYSYGVVLLEAITGRYPVDYARPKEEVHMVEWLKLMVQQKQFE 381
Query: 256 HIADPKLKGNFDLEQLKSVIMIAVRCTDSSPDKRPSMIEVVEWLKDG----VSKRKKEIP 311
+ D +L+ +LK ++ A+RC D DKRP M +V L+ + + ++
Sbjct: 382 EVVDKELEIKPTTSELKRALLTALRCVDPDADKRPKMSQVARMLESDEYPVMPREERRRR 441
Query: 312 NLSNNKGHDEENDENYEEFVT 332
N + H E D N + +T
Sbjct: 442 RNQNAETHRESTDTNKDNDIT 462
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.137 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,182,192
Number of Sequences: 26719
Number of extensions: 355006
Number of successful extensions: 4268
Number of sequences better than 10.0: 987
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 1111
length of query: 349
length of database: 11,318,596
effective HSP length: 100
effective length of query: 249
effective length of database: 8,646,696
effective search space: 2153027304
effective search space used: 2153027304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC149581.10