Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149496.4 - phase: 0 
         (475 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g49055 putative protein                                             35  0.12
At3g52900 unknown protein                                              33  0.26
At5g66030 Golgi-localized protein GRIP                                 31  1.3
At2g35540 putative DnaJ protein                                        31  1.3
At5g36100 putative protein                                             31  1.7
At4g14760 centromere protein homolog                                   30  2.2
At3g50060 R2R3-MYB transcription factor                                30  2.2
At1g17930 unknown protein                                              30  2.2
At5g24880 glutamic acid-rich protein                                   30  2.9
At3g12190 hypothetical protein                                         30  2.9
At2g27740 unknown protein                                              30  2.9
At2g26820 similar to avrRpt2-induced protein 1                         30  2.9
At1g65040                                                              30  2.9
At3g61570 unknown protein                                              30  3.8
At5g60930 microtubule-associated motor - like                          29  5.0
At2g18540 putative vicilin storage protein (globulin-like)             29  5.0
At1g17140 unknown protein                                              29  5.0
At5g60030 KED - like protein                                           29  6.5
At5g43560 unknown protein                                              29  6.5
At4g11080 98b like protein                                             29  6.5

>At3g49055 putative protein
          Length = 480

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 10/81 (12%)

Query: 385 LPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNER 444
           L Q  EE  + + EAE E+  W+  C     + E   G  E E      +D +IA L   
Sbjct: 323 LAQNVEELVKAIREAESEVSRWREAC-----ELEVEAGQREVEV-----RDQLIAVLKSE 372

Query: 445 IKEKDAALDRIPGRKKKRMDL 465
           +++  +AL R  G+ K + +L
Sbjct: 373 VEKLRSALARSEGKLKLKEEL 393


>At3g52900 unknown protein
          Length = 164

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 20/81 (24%), Positives = 44/81 (53%), Gaps = 5/81 (6%)

Query: 371 RFLSSTVPEIPLPLLPQTKEE--YQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEA 428
           R L+ T+ E+ +   P  KE    ++++  A R+I    + CQKK+K+Y+  +    ++ 
Sbjct: 69  RCLTQTLEELEIMGDPMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDTLEAFNEK- 127

Query: 429 YDSRQKDVIIAKLNERIKEKD 449
             +++K  +++ L E + E +
Sbjct: 128 --NKEKAHLVSMLMELLAESE 146


>At5g66030 Golgi-localized protein GRIP
          Length = 788

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 393 QERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDAAL 452
           +E L EAE+E+++   E  +  +D ++ +  LE+E     ++   +   +E+IK  +  L
Sbjct: 462 EEALKEAEKEVYLVSAERDRAQQDLQSALASLEKEL---EERAGALKDASEQIKSLEVKL 518

Query: 453 DRIPGRKK 460
           D    R +
Sbjct: 519 DSTVARNQ 526


>At2g35540 putative DnaJ protein
          Length = 575

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)

Query: 391 EYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDA 450
           E  E   EA   I+++    +  D++ E +M L E +A   R K    +K+N +I EKD+
Sbjct: 215 ETGEMSQEAAEAINVF----EGSDEEDEGMMTLAEMQAVIKRNK----SKVNSKITEKDS 266

Query: 451 ALDRIPGRKKKRMDLFD 467
           + +   GR+ ++  L D
Sbjct: 267 SGEENMGRETQKRSLAD 283


>At5g36100 putative protein
          Length = 236

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/92 (20%), Positives = 47/92 (50%), Gaps = 6/92 (6%)

Query: 383 PLLPQTKEEYQERLAEAE-----REIHMWKRECQKKDKDYETVM-GLLEQEAYDSRQKDV 436
           P+L Q +EE    +A  E     +E+  W    + + K+ +++  G++ ++ ++   KD 
Sbjct: 112 PVLVQIEEETTIAIAYREDEDMTKELKSWLESIRDEGKNNQSLYRGVILEKGFEEEDKDQ 171

Query: 437 IIAKLNERIKEKDAALDRIPGRKKKRMDLFDG 468
            I   + + +   A L+ + G+K++ + + +G
Sbjct: 172 SIVPRDAKSENVRAKLEDLLGKKQESVTIHEG 203


>At4g14760 centromere protein homolog
          Length = 1676

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 389 KEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDV-IIAKLNERIKE 447
           K   + RLA+ ++ +   + EC+ + ++YE      E +   ++Q ++ I+ KL E +++
Sbjct: 748 KRSTESRLADLQKNVSFLREECRSRKREYED-----ELDRVVNKQVEIFILQKLIEDLEQ 802

Query: 448 KDAAL 452
           K+ +L
Sbjct: 803 KNFSL 807


>At3g50060 R2R3-MYB transcription factor
          Length = 301

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/80 (27%), Positives = 41/80 (50%), Gaps = 5/80 (6%)

Query: 104 KNATIAEALHLKPSDLVHPHF--TIKNNLQG---LTAKFLYQKASDFVKAKKTNAFESIF 158
           K ATIA  L+ +  + V  H+  T+K    G   +T     ++  D  K +++ +F+S F
Sbjct: 79  KWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTTVTETEEDQDRPKKRRSVSFDSAF 138

Query: 159 TLLIYGLFLFPNMDNFVDLN 178
             +  GL++ P   N +D++
Sbjct: 139 APVDTGLYMSPESPNGIDVS 158


>At1g17930 unknown protein
          Length = 478

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 25/194 (12%)

Query: 47  VKVEDGILETLVQFYDPICHCFTFPDYQLVPTLEEYSFWVGLPVSEGEPFNGLEPSPKNA 106
           + + + ++  LV+ +    + F FP  ++  TL+E S  +GL V +G+P  G++   ++ 
Sbjct: 60  ISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAV-DGKPVVGVKEKDEDP 118

Query: 107 T--IAEALHLKPSDLVHPHFTIKNNLQG--LTAKFLYQKASDFVKA---KKTNAFESIFT 159
           +      L   P          K  L G  +TAK+L +  ++  K    K+       + 
Sbjct: 119 SQVCLRLLGKLP----------KGELSGNRVTAKWLKESFAECPKGATMKEIEYHTRAYL 168

Query: 160 LLIYGLFLFPNMD-NFVDLNAIKIFLAKNPV------PTLLANTYHSIHHRNIREGGLIV 212
           + I G  +F   D + + ++ + +F               LA  Y  I + + R   +I 
Sbjct: 169 IYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIG 228

Query: 213 CCAPLLYRWYASHL 226
            C  LL  W   HL
Sbjct: 229 GCLTLLQCWSYFHL 242


>At5g24880 glutamic acid-rich protein
          Length = 443

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 387 QTKEEYQERLAEAEREIHMWKRECQK---KDKDYETVMG------LLEQEAYDSRQKDVI 437
           + KEE +ER+ E E+E    K + QK   ++++ E V G      + E+E+ + ++K+V+
Sbjct: 338 EVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAEGKKKEVV 397

Query: 438 IAKLNERIKEKDAALDRIPGRKKK 461
             K        D    ++    +K
Sbjct: 398 KGKKESPSAYNDVIASKMQENPRK 421


>At3g12190 hypothetical protein
          Length = 269

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 27/104 (25%), Positives = 48/104 (45%), Gaps = 16/104 (15%)

Query: 388 TKEEYQERLAEAER--EIHMWKRECQKKDKDYETVMGLLE--------------QEAYDS 431
           +KE  +E L + E+  EI   K+  +KK KD    + L E              +E    
Sbjct: 153 SKEMSEELLVQQEKYEEILKKKKLEEKKLKDCTRDLALREGDLRWVSMRMTKRCEELRWE 212

Query: 432 RQKDVIIAKLNERIKEKDAALDRIPGRKKKRMDLFDGPHSDFED 475
           ++K++++ K NE  + K   L+R    K+K +DL +    ++ D
Sbjct: 213 KKKNLVLCKRNEEAERKLKHLNRALEEKQKEVDLIEKRLGEWRD 256


>At2g27740 unknown protein
          Length = 174

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 364 GMPYTLPRFLSSTVPEIPLPLLPQTKE--EYQERLAEAEREIHMWKRECQKKDKDYETVM 421
           G+     R L+    E+     P  KE    ++R+    RE+    + CQ+K+++++  +
Sbjct: 71  GLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLGQSCQRKEREFKEAL 130

Query: 422 GLLEQEAYDSRQKD--VIIAKLNERIKEKD 449
                EAY+ + K+  + ++KL E + E +
Sbjct: 131 -----EAYNEKNKEKAIFVSKLVELVTESE 155


>At2g26820 similar to avrRpt2-induced protein 1
          Length = 463

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 389 KEEYQERLAEAEREIHMWKR-ECQKKDKDYETVMGLLEQEAYDSRQKDVII-AKLNERIK 446
           KEE  ERL E ER I    R E +  +     +M   + +  +++ K +I  A+ NE++ 
Sbjct: 211 KEENDERLREEERVIESKNRAEAELAEMQQNLLMEKEKLQMEEAKNKQLIAQAEANEKLM 270

Query: 447 EKDAALDR 454
           E++ A +R
Sbjct: 271 EQERAKNR 278


>At1g65040 
          Length = 537

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 24/86 (27%), Positives = 40/86 (45%), Gaps = 2/86 (2%)

Query: 349 HESYTQWVIDRATAFGMPYTLPRFLSSTVPEIPLPLLPQTKEEYQERLAEAEREIHMWKR 408
           HE+  Q     A+ +G     P   ++ V      LLPQT+ E Q R  E++ E  +   
Sbjct: 381 HEARFQAAASAASIYGRSIVYPSSANTLVWSQGNSLLPQTEVEAQRRFLESQIEDILVSN 440

Query: 409 ECQKKDKDYETVMGLLEQEAYDSRQK 434
               KD+  ++++ L  +EA  +R K
Sbjct: 441 FV--KDEAMKSLIWLTAEEAAKNRGK 464


>At3g61570 unknown protein
          Length = 712

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/66 (28%), Positives = 28/66 (41%), Gaps = 10/66 (15%)

Query: 389 KEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEK 448
           KE+   +L  AE+    WK    K ++D   V  +LEQ           + +LN    E 
Sbjct: 513 KEDVTSKLLHAEKVAAEWKNRVTKVEEDNAKVRRVLEQS----------MTRLNRMSMES 562

Query: 449 DAALDR 454
           D  +DR
Sbjct: 563 DYLVDR 568


>At5g60930 microtubule-associated motor - like
          Length = 647

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 17/85 (20%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 385 LPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNER 444
           + Q  E+++   A  E+E+   K+E ++ + +   +M L +++    ++K    +++ +R
Sbjct: 32  IKQESEQFRAWKASREKEVMQLKKEGRRNEYEMHKLMALNQKQKLVLQRKTEEASQVTKR 91

Query: 445 IKEKDAALDRIPGRKKKRMDLFDGP 469
           +KE    LD      ++ +   +GP
Sbjct: 92  LKE---LLDNRKASSRETLSGANGP 113


>At2g18540 putative vicilin storage protein (globulin-like)
          Length = 699

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 389 KEEYQERLAEAEREIHMWK-RECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKE 447
           +EE ++R  E +RE  M K RE +++ K+ E V   + +E    R++++   +  ER K+
Sbjct: 551 EEEARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKK 610

Query: 448 KDAALDR 454
           +   ++R
Sbjct: 611 EREEMER 617


>At1g17140 unknown protein
          Length = 344

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/80 (23%), Positives = 37/80 (45%), Gaps = 5/80 (6%)

Query: 391 EYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKDA 450
           + + +L +A+ E+ + K +        E V    + E +   +K   +A++ E   E + 
Sbjct: 69  DLESQLGQAQEELRLLKEQLANA----EAVKKQAQDELHKKSKKPNPLARVEESATEAER 124

Query: 451 A-LDRIPGRKKKRMDLFDGP 469
              D IPG  +K  D+F+ P
Sbjct: 125 IDRDEIPGDVQKETDVFEVP 144


>At5g60030 KED - like protein
          Length = 292

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 387 QTKEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDS--------RQKDVII 438
           + KE+ ++    A+R+    K+  +  D+D       LE E   +        + +DV+ 
Sbjct: 168 KVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDEQKSAEIKEKKKNKDEDVVD 227

Query: 439 AKLNERIKEKDAALDRIPGRKKKR 462
            K  E+++++  + +R   +KKKR
Sbjct: 228 EKEKEKLEDEQRSGERKKEKKKKR 251



 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/72 (23%), Positives = 36/72 (49%), Gaps = 13/72 (18%)

Query: 390 EEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEKD 449
           E+  E+L   +R     +R+ +KK K              +++ +DV+  K+ E+++++ 
Sbjct: 131 EKVNEKLEAEQRSEERRERKKEKKKKK-------------NNKDEDVVDEKVKEKLEDEQ 177

Query: 450 AALDRIPGRKKK 461
            + DR   +KKK
Sbjct: 178 KSADRKERKKKK 189


>At5g43560 unknown protein
          Length = 1055

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 389 KEEYQERLAEAEREIHMWKRECQKKDKDYETVMGLLEQEAYDSRQKDVIIAKLNERIKEK 448
           +EE +  LAE+E++      E +KK K  +      + +  + R++D +  +  ER  EK
Sbjct: 423 REEEEAWLAESEQKGKRGASEKEKKSKKKQAKQKKNKNKGKEMRKEDKVRTQTEEREIEK 482

Query: 449 DAALDRIPGRKKKRMDLFDGPHSDFED 475
           +  +  I     ++ D   G  SD  D
Sbjct: 483 EECVRAIAESSAEKPDTL-GDVSDVSD 508


>At4g11080 98b like protein
          Length = 446

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 25/90 (27%), Positives = 42/90 (45%), Gaps = 13/90 (14%)

Query: 385 LPQTKEEYQERLAEAEREIHMWKRECQKKDKDYETV---------MGLLEQEAYDSRQK- 434
           L + K+   +++A+  +EI++ + E  K+ K+ E +         M L +QEA    +K 
Sbjct: 285 LSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKK 344

Query: 435 ---DVIIAKLNERIKEKDAALDRIPGRKKK 461
              D II K  E  K K    +  P + KK
Sbjct: 345 EKTDNIIKKTKETAKNKKKNENVDPNKPKK 374


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.321    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,314,474
Number of Sequences: 26719
Number of extensions: 515714
Number of successful extensions: 1396
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1377
Number of HSP's gapped (non-prelim): 43
length of query: 475
length of database: 11,318,596
effective HSP length: 103
effective length of query: 372
effective length of database: 8,566,539
effective search space: 3186752508
effective search space used: 3186752508
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)


Medicago: description of AC149496.4