BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149496.11 - phase: 0 /pseudo
(1173 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g03810 putative retrotransposon protein 1195 0.0
At3g32340 hypothetical protein 717 0.0
At1g37110 590 e-168
At2g07550 putative retroelement pol polyprotein 559 e-159
At1g48710 hypothetical protein 556 e-158
At3g61330 copia-type polyprotein 555 e-158
At3g45520 copia-like polyprotein 553 e-157
At5g35820 copia-like retrotransposable element 548 e-156
At1g58140 hypothetical protein 546 e-155
At2g21460 putative retroelement pol polyprotein 545 e-155
At4g21360 putative transposable element 524 e-148
At3g59720 copia-type reverse transcriptase-like protein 524 e-148
At3g25450 hypothetical protein 514 e-145
At3g60170 putative protein 514 e-145
At2g05390 putative retroelement pol polyprotein 503 e-142
At1g32590 hypothetical protein, 5' partial 475 e-134
At2g15650 putative retroelement pol polyprotein 463 e-130
At2g19840 copia-like retroelement pol polyprotein 444 e-124
At2g20460 putative retroelement pol polyprotein 417 e-116
At2g16000 putative retroelement pol polyprotein 412 e-115
>At4g03810 putative retrotransposon protein
Length = 964
Score = 1195 bits (3091), Expect = 0.0
Identities = 561/817 (68%), Positives = 669/817 (81%), Gaps = 1/817 (0%)
Query: 357 LLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDNILYANANLSNGLYVLD 416
++L L+NCYYVPAI++NIIS+SCLD GF F+IKNKCCS D++ Y +A L NGL+VL+
Sbjct: 1 MVLELKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLN 60
Query: 417 LDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFDFESYETCRSCL 476
MPIYNI K+ K N+LNPT+LWHCRLGHINE I KLH DG L+SFD+ESYETC SCL
Sbjct: 61 QSMPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCL 120
Query: 477 LGKMTKAPFTGQGERASDLLGLIHTDVCGPLNITARGGFHYFITLTDDFSRFGYVYLMKH 536
LGKMTKAPFTG ERASDLLGLIHTDVCGP++ +ARG + YFIT TDDFSR+GYVYLMKH
Sbjct: 121 LGKMTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKH 180
Query: 537 KSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTPQW 596
KS+SF FKEFQNEV+NQ GK IK LRSDRGGEYLS F +HL+ECGI+SQLTPPGTPQW
Sbjct: 181 KSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQW 240
Query: 597 NGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVEKTPYEIWNGRK 656
NGVSERRNRTLLDMVRSMMSH +LP+ WGYAL T+A+ LNR PSK+VEKTPYEIW G+
Sbjct: 241 NGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKV 300
Query: 657 PNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVF 716
PN+ KIWGCE+Y KRL++ KL KS+KC+FVGYPKET+GYYFY P + + V + G F
Sbjct: 301 PNLSFLKIWGCESYAKRLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNGAF 360
Query: 717 LEKDFVSRRISGSKVDLKEIQDPQSTEIPVEEQGQDTQTVMTENPAPVTQEPRRSSRIRQ 776
LE++F+S+ SGSKV L+E+++PQ ++P ++ P V E RRS R R
Sbjct: 361 LEREFLSKGTSGSKVLLEEVREPQG-DVPTSQEEHQLDLRRVVEPILVEPEVRRSERSRH 419
Query: 777 EPERYGYLISQEGDVLLMDQDEPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDA 836
EP+R+ + + + +++ DEP +Y EA+ GP+ +KWLEA KSEM+SM N+VW L+D
Sbjct: 420 EPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESMSQNKVWTLVDL 479
Query: 837 PEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILL 896
P+G+ PI CKW+FKKKIDMDG + YKA LVAKG+KQ+HG+DYDET+SPVAM+KSIRILL
Sbjct: 480 PDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILL 539
Query: 897 AIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASR 956
A AA++DYEIWQMDVKTAFLNGNL E VYMTQPEGF P+A +KVCKL RSIYGLKQASR
Sbjct: 540 ATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASR 599
Query: 957 SWNLRFDETVQQYGFIKNEDEPCVYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWL 1016
SWNLRF+E ++++ FI+NE+EPCVYKK SGS V+FL+LYVDDILL+GNDIP LQ +KTWL
Sbjct: 600 SWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWL 659
Query: 1017 RKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGL 1076
CFSMKD+GEA+YILGIRIYRDR +++GLSQ YIDKVL RFNMH+SKKGFIPMS G+
Sbjct: 660 GSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGI 719
Query: 1077 NLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWI 1136
LSKTQ PST DER+RM IPYASAIGSIMYAM+ TRPDV+ ALS TSRYQS+PG +WI
Sbjct: 720 TLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWI 779
Query: 1137 AVKNILKYLRRTKDTFLIYGG*EELSVIGYIDASFQT 1173
V+NI KYLRRTKD FL+YGG EEL V GY DASFQT
Sbjct: 780 VVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQT 816
>At3g32340 hypothetical protein
Length = 871
Score = 717 bits (1850), Expect = 0.0
Identities = 351/589 (59%), Positives = 429/589 (72%), Gaps = 42/589 (7%)
Query: 270 NYPKYLED---KKNGNVPTTSAGIFVIEINMSTS--TSWVLDTGCGSHICTDVQGLRKSR 324
N P+YLED KK N+ +S+GI+VIE+N++TS T WVLDTGCG+HIC +V GL SR
Sbjct: 115 NLPEYLEDLEKKKTFNI--SSSGIYVIEVNVTTSGSTPWVLDTGCGAHICVNVHGLNNSR 172
Query: 325 ALAKGEVDLRVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAG 384
+G+VDLRV NGAKV+ALAVGTY L+LPSG++L L+NCYYVPAI++NI+S+SCLD G
Sbjct: 173 TFEEGQVDLRVANGAKVSALAVGTYSLSLPSGMVLELKNCYYVPAINKNIVSVSCLDMEG 232
Query: 385 FEFTIKNKCCSVYLDNILYANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRL 444
F F+IKNKCCS D++ Y +A L NGLYVL+ MP+YNI K K N+LNPT+LWHCRL
Sbjct: 233 FHFSIKNKCCSFDRDDMFYGSAPLENGLYVLNQSMPVYNIRTKIFKSNDLNPTFLWHCRL 292
Query: 445 GHINENRISKLHKDGFLDSFDFESYETCRSCLLGKMTKAPFTGQGERASDLLGLIHTDVC 504
GHINE RI KLH DG L+SFD+ESYETC SCLLGKMTKAPF+G ERA DLLGLIHTDVC
Sbjct: 293 GHINEKRIQKLHSDGLLNSFDYESYETCESCLLGKMTKAPFSGHSERAGDLLGLIHTDVC 352
Query: 505 GPLNITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRS 564
GP++ +ARG + YFIT TDDFSR+ YVYLMKHKSESF FKEFQNEV+NQLGK IK LRS
Sbjct: 353 GPMSTSARGNYQYFITFTDDFSRYSYVYLMKHKSESFEKFKEFQNEVQNQLGKSIKALRS 412
Query: 565 DRGGEYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFL 624
DRGGEYLS F HL+ECGI+SQLT PGTPQWNGVS+RRNRTLLDM RSMMSH +L
Sbjct: 413 DRGGEYLSQVFSGHLRECGIVSQLTSPGTPQWNGVSKRRNRTLLDMFRSMMSHTDLAPSF 472
Query: 625 WGYALLTAAYTLNRVPSKAVEKTPYEIWNGRKPNVGHFKIWGCEAYIKRLMSTKLEQKSE 684
WGYAL T WGCE Y+KRL+S KL K +
Sbjct: 473 WGYALET--------------------------------FWGCETYVKRLISDKLGPKYD 500
Query: 685 KCFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEKDFVSRRISGSKVDLKEIQDPQ-STE 743
KC+FVGYPKET+GYYFY + + VA+ G FLE++F+S+ SGSKV L+E+++PQ
Sbjct: 501 KCYFVGYPKETKGYYFYHLIDNNVFVARNGAFLEREFLSKGTSGSKVLLEEVREPQGDVS 560
Query: 744 IPVEEQGQDTQTVMTENPAPVTQEPRRSSRIRQEPERYGYLISQEGDVLLMDQDEPVTYT 803
EE D + V+ P PV E RRS R R EP+R+G + + + +++ EP +Y
Sbjct: 561 TSQEEHKLDLRRVV--EPIPVEPEVRRSERSRHEPDRFGDWVMDDHALFIIESHEPTSYE 618
Query: 804 EAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKK 852
EA+ GP+ + WLEA KSEM+SM N+VW L+D P+G+ I CKW+FKKK
Sbjct: 619 EALMGPDSDNWLEAAKSEMESMSQNKVWTLVDLPDGVKAIECKWLFKKK 667
Score = 92.0 bits (227), Expect = 2e-18
Identities = 47/64 (73%), Positives = 52/64 (80%)
Query: 1068 GFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQ 1127
G IPMS G+ LSKTQ ST DER+RM IPYASAIGSIM AM+ TRPDV+ ALS TSRYQ
Sbjct: 670 GLIPMSHGITLSKTQCLSTHDERERMSKIPYASAIGSIMNAMLWTRPDVACALSMTSRYQ 729
Query: 1128 SNPG 1131
S+PG
Sbjct: 730 SDPG 733
>At1g37110
Length = 1356
Score = 590 bits (1521), Expect = e-168
Identities = 391/1183 (33%), Positives = 595/1183 (50%), Gaps = 103/1183 (8%)
Query: 50 IPETPPAGASAALRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYE 109
+P+ S +N H++D V L K + T D+ L Y
Sbjct: 70 VPDPVKIEQSEQAKNIIINHISDVV-------------LLKVNHYATTADLWATLNKKYM 116
Query: 110 EQARHERFDVSKALFSTKLSEGGPVGPHVLKMIGYSENLARLGFVLEQELVVDLVLQSLP 169
E + R L+S K+ + +V + + L L +++E+ L+L SLP
Sbjct: 117 ETSLPNRIYTQLKLYSFKMVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLP 176
Query: 170 ESLNGFVHNFLMNDMDKTLPQLAAMLRTAEKNMK-----GKGKVAAILMVNNGKFKKHHK 224
S H + T+ + + ++ E+ + KG+ A + G+ +
Sbjct: 177 ASHIQLKHTLKYGNKTLTVQDVTSSAKSLERELAEAVDLDKGQAAVLYTTERGRPLVRN- 235
Query: 225 KPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDKCFYCNNAGHWK*NYPKYLEDKKNGNVP 284
N+ G GKG+ + TK C+YC GH K + Y KK +
Sbjct: 236 --NQKGGQGKGRSRSNSKTKV-----------PCWYCKKEGHVKKDC--YSRKKKMESEG 280
Query: 285 TTSAGIFVIEINMSTSTS---------WVLDTGCGSHICTDVQGLRKSRALAKGEVDLRV 335
AG+ ++ S + S W+LD+GC SH+ + + KG + +
Sbjct: 281 QGEAGVITEKLVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQE--KGNTTILL 338
Query: 336 GNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCS 395
G+ V + GT + G + LEN YVP + RN+IS LDK G+
Sbjct: 339 GDDHSVESQGQGTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVR 398
Query: 396 VYLDNILYANANLSNGLYVLD---LDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRI 452
+ +N +LSNGLYVLD + + N ++K T LWH RLGH++ N +
Sbjct: 399 YFKNNKTALRGSLSNGLYVLDGSTVMSELCNAETDKVK------TALWHSRLGHMSMNNL 452
Query: 453 SKLHKDGFLDSFDFESYETCRSCLLGKMTKAPFTGQGERASDLLGLIHTDVCGPLNITAR 512
L G +D + E C C++GK K F + D L +H D+ G N+T
Sbjct: 453 KVLAGKGLIDRKEINELEFCEHCVMGKSKKVSFNVGKHTSEDALSYVHADLWGSPNVTPS 512
Query: 513 -GGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYL 571
G YF+++ DD +R ++Y +K K E+F F E+++ VENQ+ KK+K LR+D G E+
Sbjct: 513 ISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFC 572
Query: 572 SLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLT 631
+ FD++ KE GI T TPQ NGV+ER NRT+++ VR +++ + + W A T
Sbjct: 573 NSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAAT 632
Query: 632 AAYTLNRVPSKAVE-KTPYEIWNGRKPNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVG 690
AAY +NR P+ A+ P E+W RKP H + +G AY+ + KL+ ++ K FF+G
Sbjct: 633 AAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKFGSIAYVHQDQG-KLKPRALKGFFLG 691
Query: 691 YPKETRGYYFYKPPEGTIVVAKTGVFLEKDFVSRRISGSKVDLKEIQDPQSTEIPVEEQ- 749
YP T+GY + E V+++ VF E V R + + D + ++T VE+
Sbjct: 692 YPAGTKGYKVWLLEEEKCVISRNVVFQES-VVYRDLKVKEDDTDNLNQKETTSSEVEQNK 750
Query: 750 -----GQDTQTVMTENPAPVTQ---------EPRRSSRIRQEPERYGYL----------- 784
G + + P+T+ E S + ++ P+R G
Sbjct: 751 FAEASGSGGVIQLQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRR 810
Query: 785 -------ISQEGDV---LLMDQD----EPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQV 830
++E V L++ ++ EP +Y EA+ + EKW A EMDS+ N
Sbjct: 811 NINPPTRFTEESSVTFALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGT 870
Query: 831 WNLIDAPEGINPIGCKWVFKKKIDMDGKVST-YKARLVAKGFKQIHGVDYDETFSPVAMI 889
W+L+D P+ IGC+W+FK K + G T +KARLVAKG+ Q GVDY E F+PV
Sbjct: 871 WDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKH 930
Query: 890 KSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIY 949
SIRIL+++ D E+ QMDVKT FL+G+L E++YM QPEGF + KVC+L++S+Y
Sbjct: 931 VSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLY 990
Query: 950 GLKQASRSWNLRFDETVQQYGFIKNEDEPCVY-KKVSGSIVSFLILYVDDILLIGNDIPT 1008
GLKQ+ R WN RFD + FI++E + CVY K VS +L+LYVDD+L+ G
Sbjct: 991 GLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAE 1050
Query: 1009 LQEIKTWLRKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKG 1068
+ +K L F MKD+G AS ILGI IYRDR +L LSQ YI KVL RFNM +K
Sbjct: 1051 INRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMT 1110
Query: 1069 FIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQS 1128
P+ + L+ + +DE +PY+SA+GSIMYAM+ TRPD++YA+ SRY S
Sbjct: 1111 NAPVGAHFKLAAVRE---EDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMS 1167
Query: 1129 NPGNEYWIAVKNILKYLRRTKDTFLIYGG*EELSVIGYIDASF 1171
PG+ +W AVK +++YL+ +D L++ ++ +V GY D+++
Sbjct: 1168 KPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNY 1210
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 559 bits (1441), Expect = e-159
Identities = 373/1155 (32%), Positives = 580/1155 (49%), Gaps = 79/1155 (6%)
Query: 77 SCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGP 136
S I+L+ L+K + TA M+ L LY +A R + L+S K+SE V
Sbjct: 76 SAIVLSVTDRVLRKIKKESTAAAMLLALDKLYMSKALPNRIYPKQKLYSFKMSENLSVEG 135
Query: 137 HVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDK--TLPQLAAM 194
++ + + +L + ++ E L+L +LP++ + + TL ++AA
Sbjct: 136 NIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYSSGKSILTLDEVAAA 195
Query: 195 LRTAEKNMKGKGKVAAILMVNNGKFKKHHKKPNKSKGNGKGKIVAKPSTKALKPTGGVAK 254
+ + E + G V + V K NK KG KGK K KP
Sbjct: 196 IYSKELEL---GSVKKSIKVQAEGLYVKDKNENKGKGEQKGKGKGKKGKSKKKPG----- 247
Query: 255 DDKCFYCNNAGHWK*-----NYPKYLEDKK--------NGNVPTTSAGIFVIEINMSTST 301
C+ C GH++ N P++ + + GN+ +AG +V E ST
Sbjct: 248 ---CWTCGEEGHFRSSCPNQNKPQFKQSQVVKGESSGGKGNL-AEAAGYYVSEALSSTEV 303
Query: 302 ----SWVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVLTLPSGL 357
W+LDTGC H+ + + A G V R+GN VGT + GL
Sbjct: 304 HLEDEWILDTGCSYHMTYKREWFHEFNEDAGGSV--RMGNKTVSRVRGVGTIRVKNSDGL 361
Query: 358 LLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDNILYANANLSNGLYVLDL 417
+ L N Y+P + RN++S+ +KAG++F ++ + N + + LY+L+
Sbjct: 362 TIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILRIKAGNQVLLTGRRYDTLYLLNW 421
Query: 418 DMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFDFESYETCRSCLL 477
P+ + + +K + T LWH RL H+++ + L + GFLD S + C C+
Sbjct: 422 K-PVASESLAVVK--RADDTVLWHQRLCHMSQKNMEILVRKGFLDKKKVSSLDVCEDCIY 478
Query: 478 GKMTKAPFTGQGERASDLLGLIHTDVCG-PLNITARGGFHYFITLTDDFSRFGYVYLMKH 536
GK + F+ + L IH+D+ G P + G YF+++ DDF+R +VY MK
Sbjct: 479 GKAKRKSFSLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKT 538
Query: 537 KSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTPQW 596
K E+F F E+ N VENQ +++K LR+D G E+ + FD + GI T TPQ
Sbjct: 539 KDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQ 598
Query: 597 NGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVE-KTPYEIWNGR 655
NGV+ER NRT+++ VRSM+S + LP W A T +N+ PS A+ + P + W+G
Sbjct: 599 NGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGN 658
Query: 656 KPNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKTGV 715
P + + +GC A++ KLE +++K +GYP +GY + E VV++ +
Sbjct: 659 PPVYSYLRRYGCVAFV-HTDDGKLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNII 717
Query: 716 FLE----KDFVSRRISGSKVDLKEIQDPQSTEIPVEEQ---GQDTQTVMT----ENPA-- 762
F E KD + R+ + S + + ++ E G D + V T E+P
Sbjct: 718 FQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPESPVVS 777
Query: 763 -PVTQEPR--RSSRIRQEPERYGYLISQE----------------GDVLLMDQD----EP 799
P TQ+ S + Q P Y + ++ + L +D EP
Sbjct: 778 TPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFDDEDYYAEALYTTEDGEAVEP 837
Query: 800 VTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDG-K 858
Y +A F+KW AM E+DS N W ++ PE IGC+W+FK K+ + G +
Sbjct: 838 ENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGILGVE 897
Query: 859 VSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNG 918
+KARLVAKG+ Q G+DY E F+PV SIR+LL+I A D E+ Q+DVKTAFL+G
Sbjct: 898 EPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKTAFLHG 957
Query: 919 NLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEP 978
L E +YM+ PEG+ +VC L +++YGLKQA + WN +FD +++ F+K+ +
Sbjct: 958 ELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKEICFVKSAYDS 1017
Query: 979 CVYKKV--SGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRI 1036
C Y KV GS++ +L++YVDDIL+ + + +K L F MKDLG A ILG+ I
Sbjct: 1018 CAYTKVLPDGSVM-YLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGAAKKILGMEI 1076
Query: 1037 YRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDI 1096
RDR+ +L LSQ Y++K+L +NM E+K P+ + + D M+ +
Sbjct: 1077 IRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAATEQKLIRDEDFMKSV 1136
Query: 1097 PYASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYG 1156
PY+SA+GSIMYAM+ TRPD++Y + SR+ S P E+W+ VK +L+Y++ T T L Y
Sbjct: 1137 PYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYK 1196
Query: 1157 G*EELSVIGYIDASF 1171
S++GY DA +
Sbjct: 1197 KSSSFSIVGYCDADY 1211
>At1g48710 hypothetical protein
Length = 1352
Score = 556 bits (1434), Expect = e-158
Identities = 382/1212 (31%), Positives = 605/1212 (49%), Gaps = 87/1212 (7%)
Query: 21 LTETNFIDWSRNMRIVL-THEKKLYVLDGPIPETPPAGASAALRNAHAKHLNDSVEVSCI 79
LT++N+ +WS M+ +L H+ V G I S ++ + C+
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCL 72
Query: 80 MLASMTPE-LQKQHEGMTAFDMIEHLKTLYE--EQARHERFDVSKALFST-KLSEGGPVG 135
+ + + +K E +A + E L+T Y+ +Q + R + F ++ EG V
Sbjct: 73 IYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVS 132
Query: 136 PHVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDK-----TLPQ 190
+ +++ + NL R G L+ +++ VL+SL F H + + K T+ Q
Sbjct: 133 DYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLK---FEHIVTVIEETKDLEAMTIEQ 189
Query: 191 LAAMLRTAEKNMKGKGKVAAILM----------------------------VNNGKFKKH 222
L L+ E+ K K + ++ NG+ +
Sbjct: 190 LLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 223 HKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDKCFYCNNAGHW----K*NYPKYLEDK 278
H+ +G + K K+ V KC+ C GH+ K K E+K
Sbjct: 250 HEDNTNQRGENSSRGRGKGHPKSRYDKSSV----KCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 279 KNGNVPTTSAGIFVIEIN-----MSTSTSWVLDTGCGSHICTDVQGLRKSRALAKGEVDL 333
N ++ + + W LD+G +H+C + +G V L
Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Query: 334 RVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKC 393
G+ +K+ G ++ L +G + N YY+P++ NI+S+ L + G++ +K+
Sbjct: 366 --GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNN 423
Query: 394 CSV--YLDNILYANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENR 451
S+ N++ N ++VL+ I N A+ LK ++LWH R GH+N
Sbjct: 424 LSIRDQESNLITKVPMSKNRMFVLN----IRNDIAQCLKMCYKEESWLWHLRFGHLNFGG 479
Query: 452 ISKLHKDGFLDSFDFESY--ETCRSCLLGKMTKAPFTGQGE-RASDLLGLIHTDVCGPLN 508
+ L + + ++ + C CLLGK K F + RA L LIHTDVCGP+
Sbjct: 480 LELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIK 539
Query: 509 ITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGG 568
+ G +YF+ DDFSR +VY +K KSE F FK+F+ VE + G IK +RSDRGG
Sbjct: 540 PKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGG 599
Query: 569 EYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYA 628
E+ S EF + ++ GI QLT P +PQ NGV+ER+NRT+L+M RSM+ LP LW A
Sbjct: 600 EFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEA 659
Query: 629 LLTAAYTLNRVPSKAVE-KTPYEIWNGRKPNVGHFKIWG--CEAYIKRLMSTKLEQKSEK 685
+ A Y LNR P+K+V KTP E W+GRK V H +++G A++ +KL+ KSEK
Sbjct: 660 VACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEK 719
Query: 686 CFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEK---DFVSRRISGSKVDLKEIQDPQST 742
F+GY ++GY Y P ++++ VF E+ D+ S + E +P+ T
Sbjct: 720 YIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPT 779
Query: 743 -EIPVEEQGQDTQTVMTENPAPVTQEPRRSSRIRQEPERYGYLISQEGDVL--LMDQDEP 799
E P E+ T T + + R+ R R E Y +QE L L + EP
Sbjct: 780 REEPPSEEPTTPPTSPTSSQIEESSS-ERTPRFRSIQELYEVTENQENLTLFCLFAECEP 838
Query: 800 VTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKV 859
+ + EAI E + W AM E+ S+ N W L P G IG KWV+K K + G+V
Sbjct: 839 MDFQEAI---EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEV 895
Query: 860 STYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGN 919
YKARLVAKG+ Q G+DYDE F+PVA ++++R+++++AA + ++I QMDVK+AFLNG+
Sbjct: 896 ERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGD 955
Query: 920 LLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPC 979
L E+VY+ QP+G+ KV +L++++YGLKQA R+WN R D+ ++ FIK E
Sbjct: 956 LEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHA 1015
Query: 980 VYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRD 1039
+Y K+ + LYVDD++ GN+ +E K + K F M D+G SY LGI + ++
Sbjct: 1016 LYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQE 1075
Query: 1040 RSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYA 1099
+ + ++Q Y +VL++F M +S PM G+ LSK +E + + +
Sbjct: 1076 DNG--IFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK------KEEGEGVDPTTFK 1127
Query: 1100 SAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG*E 1159
S +GS+ Y + CTRPD+ YA+ SRY +P ++ A K IL+Y++ T + L Y
Sbjct: 1128 SLVGSLRY-LTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTS 1186
Query: 1160 ELSVIGYIDASF 1171
+ ++GY D+ +
Sbjct: 1187 DYKLVGYSDSDW 1198
>At3g61330 copia-type polyprotein
Length = 1352
Score = 555 bits (1429), Expect = e-158
Identities = 382/1214 (31%), Positives = 603/1214 (49%), Gaps = 91/1214 (7%)
Query: 21 LTETNFIDWSRNMRIVL-THEKKLYVLDGPIPETPPAGASAALRNAHAKHLNDSVEVSCI 79
LT++N+ +WS M+ +L H+ V G I S ++ + C+
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCL 72
Query: 80 MLASMTPE-LQKQHEGMTAFDMIEHLKTLYE--EQARHERFDVSKALFST-KLSEGGPVG 135
+ + + +K E +A + E L+T Y+ +Q + R + F ++ EG V
Sbjct: 73 IYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVS 132
Query: 136 PHVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDK-----TLPQ 190
+ +++ + NL R G L+ +++ VL+SL F H + + K T+ Q
Sbjct: 133 DYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLK---FEHIVTVIEETKDLEAMTIEQ 189
Query: 191 LAAMLRTAEKNMKGKGKVAAILM----------------------------VNNGKFKKH 222
L L+ E+ K K +A ++ NG+ +
Sbjct: 190 LLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 223 HKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDKCFYCNNAGHWK*NYPK--------- 273
H+ +G + K K+ V KC+ C GH+
Sbjct: 250 HEDNTNQRGENSSRGRGKGHPKSRYDKSSV----KCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 274 --YLEDKKNGNVPTTSAGIFVIEINMSTSTSWVLDTGCGSHICTDVQGLRKSRALAKGEV 331
Y+E+K A E + W LD+G +H+C + +G V
Sbjct: 306 AHYVEEKIQEEDMLLMASYKKDE--QKENHKWYLDSGASNHMCGRKSMFAELDESVRGNV 363
Query: 332 DLRVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKN 391
L G+ +K+ G ++ L +G + N YY+P++ NI+S+ L + G++ +K+
Sbjct: 364 AL--GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKD 421
Query: 392 KCCSV--YLDNILYANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINE 449
S+ N++ N ++VL+ I N A+ LK ++LWH R GH+N
Sbjct: 422 NNLSIRDQESNLITKVPMSKNRMFVLN----IRNDIAQCLKMCYKEESWLWHLRFGHLNF 477
Query: 450 NRISKLHKDGFLDSFDFESY--ETCRSCLLGKMTKAPFTGQGE-RASDLLGLIHTDVCGP 506
+ L + + ++ + C CLLGK K F + RA L LIHTDVCGP
Sbjct: 478 GGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGP 537
Query: 507 LNITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDR 566
+ + G +YF+ DDFSR +VY +K KSE F FK+F+ VE + G IK +RSDR
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDR 597
Query: 567 GGEYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWG 626
GGE+ S EF + ++ GI QLT P +PQ NGV ER+NRT+L+M RSM+ LP LW
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWA 657
Query: 627 YALLTAAYTLNRVPSKAVE-KTPYEIWNGRKPNVGHFKIWG--CEAYIKRLMSTKLEQKS 683
A+ A Y LNR P+K+V KTP E W+GRKP V H +++G A++ +KL+ KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKS 717
Query: 684 EKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEK---DFVSRRISGSKVDLKEIQDPQ 740
EK F+GY ++GY Y P ++++ VF E+ D+ S + E +P+
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPE 777
Query: 741 ST-EIPVEEQGQDTQTVMTENPAPVTQEPRRSSRIRQEPERYGYLISQEGDVL--LMDQD 797
T E P E+ T T + + R+ R R E Y +QE L L +
Sbjct: 778 PTREEPPSEEPTTPPTSPTSSQIEESSS-ERTPRFRSIQELYEVTENQENLTLFCLFAEC 836
Query: 798 EPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDG 857
EP+ + +AI E + W AM E+ S+ N W L P G IG KWV+K K + G
Sbjct: 837 EPMDFQKAI---EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKG 893
Query: 858 KVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLN 917
+V YKARLVAKG+ Q G+DYDE F+PVA ++++R+++++AA + ++I QMDVK+AFLN
Sbjct: 894 EVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLN 953
Query: 918 GNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDE 977
G+L E+VY+ QP+G+ KV +L++ +YGLKQA R+WN R D+ ++ FIK E
Sbjct: 954 GDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
Query: 978 PCVYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIY 1037
+Y K+ + LYVDD++ GN+ +E K + K F M D+G SY LGI +
Sbjct: 1014 HALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVK 1073
Query: 1038 RDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIP 1097
++ + + ++Q Y +VL++F + +S PM G+ LSK +E + +
Sbjct: 1074 QEDNG--IFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSK------KEEGEGVDPTT 1125
Query: 1098 YASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG 1157
+ S +GS+ Y + CTRPD+ YA+ SRY +P ++ A K IL+Y++ T + L Y
Sbjct: 1126 FKSLVGSLRY-LTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYST 1184
Query: 1158 *EELSVIGYIDASF 1171
+ ++GY D+ +
Sbjct: 1185 TSDYKLVGYSDSDW 1198
>At3g45520 copia-like polyprotein
Length = 1363
Score = 553 bits (1425), Expect = e-157
Identities = 377/1168 (32%), Positives = 577/1168 (49%), Gaps = 98/1168 (8%)
Query: 77 SCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGP 136
S I+L+ L+K + +A M+E L LY +A R + + L+S K+SE +
Sbjct: 76 STIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLKQKLYSFKMSENLSIEG 135
Query: 137 HVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDKT---LPQLAA 193
++ + + +L L ++ E L+L SLP+ + + + L KT L ++AA
Sbjct: 136 NIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQ-LKDTLKYSSGKTVLSLDEVAA 194
Query: 194 MLRTAE-------KNMKGKGKVAAILMVNNGKFKKHHKKPNKSKGNGKGKIVAKPSTKAL 246
+ + E K++KG+ + + K K ++ ++ K GKGK S +
Sbjct: 195 AIYSRELEFGSVKKSIKGQAEGLYV------KDKAENRGRSEQKDKGKGKRSKSKSKRG- 247
Query: 247 KPTGGVAKDDKCFYCNNAGHWK*-----NYPKYLEDKKN--------GNVP------TTS 287
C+ C GH K N P++ N GN+ S
Sbjct: 248 -----------CWICGEDGHLKSTCPNKNKPQFKNQGSNKGESSGGKGNLVEGSVNFVES 296
Query: 288 AGIFVIEINMSTST----SWVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAA 343
AG+FV E ST W++DTGC H+ + L A G V R+GN +
Sbjct: 297 AGMFVSEALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGGSV--RMGNKSISRV 354
Query: 344 LAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDNILY 403
VGT + +GL + L+N Y+P + RN++S+ +KAG +F +N + N +
Sbjct: 355 KGVGTVRIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESENGMLRIKSGNQVL 414
Query: 404 ANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDS 463
+ LY+L P + + + N+ T LWH RL H+++ +S L K GFLD
Sbjct: 415 LEGRRYDTLYILH-GKPATDESLAVARAND--DTVLWHRRLCHMSQKNMSLLIKKGFLDK 471
Query: 464 FDFESYETCRSCLLGKMTKAPFTGQGERASDLLGLIHTDVCG-PLNITARGGFHYFITLT 522
+TC C+ G+ K F L +H+D+ G P + G YFI+
Sbjct: 472 KKVSMLDTCEDCIYGRAKKIGFNLAQHDTKKKLEYVHSDLWGAPTVPMSLGNCQYFISFI 531
Query: 523 DDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKEC 582
DD++R +VY +K K E+F F + + VENQ G+++K LR+D G E+ + FD +E
Sbjct: 532 DDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEK 591
Query: 583 GILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSK 642
G T TPQ NGV ER NRT+++ VRSM+ + LP W A TA +N+ P
Sbjct: 592 GFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCS 651
Query: 643 AVE-KTPYEIWNGRKPNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYYFY 701
A+ + P + W+G+ P + + +GC ++ KL +++K +GYP +GY +
Sbjct: 652 AINFEFPDKRWSGKAPIYSYLRRYGCVTFV-HTDGGKLNLRAKKGVLIGYPSGVKGYKVW 710
Query: 702 KPPEGTIVVAKTGVFLE----KDFVSRRI---------SGSKVDLKEIQDPQSTEIPVEE 748
E VV++ F E KD + R+ +GS +DL D ++ +
Sbjct: 711 LIEEKKCVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQS 770
Query: 749 QGQ---DTQTVMTENPAPVTQEPRRSSRIRQEPERYGYLISQE----------------G 789
Q Q T+ +T P + + + Q P Y + +E
Sbjct: 771 QAQVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVRDRERREIRAPRRFDDEDYYA 830
Query: 790 DVLLMDQD----EPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGC 845
+ L +D EP Y EA+ ++KW AM E++S N W + PE IG
Sbjct: 831 EALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGS 890
Query: 846 KWVFKKKIDMDG-KVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDY 904
+W++K K + G + +KARLVAKG+ Q GVDY E F+PV SIRILL+I A +
Sbjct: 891 RWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENL 950
Query: 905 EIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDE 964
E+ Q+DVKTAFL+G L E +YM PEG +VC L +S+YGLKQA R WN +F+
Sbjct: 951 ELEQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNH 1010
Query: 965 TVQQYGFIKNEDEPCVY-KKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMK 1023
+ + GF +++ + C Y KK+S +L+ YVDD+L+ N++ + +K L F MK
Sbjct: 1011 YMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMK 1070
Query: 1024 DLGEASYILGIRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQS 1083
DLG A ILGI I DR +L LSQ Y++KVL+ FNM ESK P+ + L +
Sbjct: 1071 DLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSATE 1130
Query: 1084 PSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILK 1143
E + M +PY+SA+GSIMYAMI TRPD++Y + SR+ S P E+W+ VK +L+
Sbjct: 1131 EKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLR 1190
Query: 1144 YLRRTKDTFLIYGG*EELSVIGYIDASF 1171
Y++ T DT L Y + S+ GY DA +
Sbjct: 1191 YIKGTVDTRLCYKRNSDFSICGYCDADY 1218
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 548 bits (1412), Expect = e-156
Identities = 365/1157 (31%), Positives = 574/1157 (49%), Gaps = 98/1157 (8%)
Query: 77 SCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGP 136
S I+L+ L+K + TA MI+ L L+ ++ R + + L+ K+SE +
Sbjct: 81 STIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPNRIYLKQRLYGYKMSENMTMEE 140
Query: 137 HVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDKTLPQLAAMLR 196
+V +L + V+ E ++L SLP + L ++ + +R
Sbjct: 141 NVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETLKYCKTTLHLEEITSAIR 200
Query: 197 TAEKNMKGKGKVA-----AILMVNNGKFKKHHKKPNKSKGNGKGKIVAKPSTKALKPTGG 251
+ + GK+ + + + G+ + K PNK+K K K K
Sbjct: 201 SKILELGASGKLLKNNSDGLFVQDRGRSETRGKGPNKNKSRSKSKGAGKT---------- 250
Query: 252 VAKDDKCFYCNNAGHWK*NYPKYLEDKKNGNVP------------TTSAGIFVIEINMS- 298
C+ C GH+K + E K G+ T +A + V +
Sbjct: 251 ------CWICGKEGHFKKQCYVWKERNKQGSTSERGEASTVTARVTDAAALVVSRALLGF 304
Query: 299 ---TSTSWVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVLTLPS 355
T +W+LDTGC H+ + + A G+V R+GN +G +
Sbjct: 305 AEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKV--RMGNDTYSEVKGIGDVRIKNED 362
Query: 356 GLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDNILYANANLSNGLYVL 415
G + L + Y+P +S+N+IS+ L+ G F K +++ +++ + LY L
Sbjct: 363 GSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFKNDLTVLTGKKESTLYFL 422
Query: 416 DLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFDFESYETCRSC 475
N + E + T LWH RLGHI + L G LD S+ +
Sbjct: 423 QGTTLAGEAN---VIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLDKNIMISFGAAKH- 478
Query: 476 LLGKMTKAPFTGQGERASDLLGLIHTDVCGPLNIT-ARGGFHYFITLTDDFSRFGYVYLM 534
+TK D L +H+D+ G N+ + G YFIT DDF+R ++Y +
Sbjct: 479 ----VTK-----------DKLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWIYFI 523
Query: 535 KHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTP 594
+ K E+F+ F E++ ++ENQ KK+K+L +D G E+ + EFD+ ++ G++ T TP
Sbjct: 524 RTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTP 583
Query: 595 QWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVE-KTPYEIWN 653
Q NGV+ER NRT+++ VR M+S + L W A TA + +N+ PS ++E P E W
Sbjct: 584 QQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWT 643
Query: 654 GRKPNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKT 713
G P+ K +G AYI KL +++K F+GYP + + + + VV++
Sbjct: 644 GHPPDYKILKKFGSVAYIHSDQG-KLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCVVSRD 702
Query: 714 GVF--------LEKDFVSRR------ISGSKVDLKEIQDPQSTEIPVEEQGQDTQTVMTE 759
VF L+K+ +S + + ++LK + + + Q T
Sbjct: 703 IVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQEQASTTR 762
Query: 760 NPAPVTQEPRRSS-------------RIRQEPERYGYLISQE----GDVLLMDQD----E 798
+ + Q S RIR++ + ++ G L M +D E
Sbjct: 763 SASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEVYE 822
Query: 799 PVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDG- 857
P TY EA+ PE EKW +A EMDSM N W++ID PEG IGCKW+FK+K + G
Sbjct: 823 PETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGV 882
Query: 858 KVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLN 917
+ YKARLVAKGF Q G+DY E FSPV SIR LL+I D E+ Q+DVKTAFL+
Sbjct: 883 EPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLH 942
Query: 918 GNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDE 977
GNL E + M+QPEG+ D +T+KVC L++S+YGLKQ+ R WN RFD + G+ +++
Sbjct: 943 GNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYN 1002
Query: 978 PCVY-KKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRI 1036
PCVY ++++ +L+LYVDD+L+ + +Q++K L + F MKDLG A ILG+ I
Sbjct: 1003 PCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGPARKILGMEI 1062
Query: 1037 YRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDI 1096
R+R Q +L LSQ Y+ VLR F M +SK P+ + L + + + M+ +
Sbjct: 1063 TRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLARDAEYMKLV 1122
Query: 1097 PYASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYG 1156
PY +AIGSIMY+MI +RPD++Y + SR+ S P E+W AVK +++Y++ T+DT L +
Sbjct: 1123 PYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQDTCLRFK 1182
Query: 1157 G*EELSVIGYIDASFQT 1173
++ + GY D+ + T
Sbjct: 1183 KDDKFEIRGYCDSDYAT 1199
>At1g58140 hypothetical protein
Length = 1320
Score = 546 bits (1408), Expect = e-155
Identities = 376/1209 (31%), Positives = 597/1209 (49%), Gaps = 113/1209 (9%)
Query: 21 LTETNFIDWSRNMRIVL-THEKKLYVLDGPIPETPPAGASAALRNAHAKHLNDSVEVSCI 79
LT++N+ +WS M+ +L H+ V G I S ++ + C+
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCL 72
Query: 80 MLASMTPE-LQKQHEGMTAFDMIEHLKTLYE--EQARHERFDVSKALFST-KLSEGGPVG 135
+ + + +K E +A + E L+T Y+ +Q + R + F ++ EG V
Sbjct: 73 IYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVS 132
Query: 136 PHVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDK-----TLPQ 190
+ +++ + NL R G L+ +++ VL+SL F H + + K T+ Q
Sbjct: 133 DYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLK---FEHIVTVIEETKDLEAMTIEQ 189
Query: 191 LAAMLRTAEKNMKGKGKVAAILM----------------------------VNNGKFKKH 222
L L+ E+ K K + ++ NG+ +
Sbjct: 190 LLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 223 HKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDKCFYCNNAGHW----K*NYPKYLEDK 278
H+ +G + K K+ V KC+ C GH+ K K E+K
Sbjct: 250 HEDNTNQRGENSSRGRGKGHPKSRYDKSSV----KCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 279 KNGNVPTTSAGIFVIEIN-----MSTSTSWVLDTGCGSHICTDVQGLRKSRALAKGEVDL 333
N ++ + + W LD+G +H+C + +G V L
Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Query: 334 RVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKC 393
G+ +K+ G ++ L +G + N YY+P++ NI+S+ L + G++ +K+
Sbjct: 366 --GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNN 423
Query: 394 CSV--YLDNILYANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENR 451
S+ N++ N ++VL+ I N A+ LK ++LWH R GH+N
Sbjct: 424 LSIRDQESNLITKVPMSKNRMFVLN----IRNDIAQCLKMCYKEESWLWHLRFGHLNFGG 479
Query: 452 ISKLHKDGFLDSFDFESY--ETCRSCLLGKMTKAPFTGQGE-RASDLLGLIHTDVCGPLN 508
+ L + + ++ + C CLLGK K F + RA L LIHTDVCGP+
Sbjct: 480 LELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIK 539
Query: 509 ITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGG 568
+ G +YF+ DDFSR +VY +K KSE F FK+F+ VE + G IK +RSDRGG
Sbjct: 540 PKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGG 599
Query: 569 EYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYA 628
E+ S EF + ++ GI QLT P +PQ NGV+ER+NRT+L+M RSM+ LP LW A
Sbjct: 600 EFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEA 659
Query: 629 LLTAAYTLNRVPSKAVE-KTPYEIWNGRKPNVGHFKIWG--CEAYIKRLMSTKLEQKSEK 685
+ A Y LNR P+K+V KTP E W+GRKP V H +++G A++ +KL+ KSEK
Sbjct: 660 VACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEK 719
Query: 686 CFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEK---DFVSRRISGSKVDLKEIQDPQST 742
F+GY ++GY Y P ++++ VF E+ D+ S + E P+ T
Sbjct: 720 YIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPT 779
Query: 743 EIPVEEQGQDTQTVMTENPAPVTQEPRRSSRIRQEPERYGYLISQEGDVLLMDQDEPVTY 802
EE + T +P SS+I ++ EP+ +
Sbjct: 780 R---EEPPSEEPTTPPTSPT--------SSQIE-------------------EKCEPMDF 809
Query: 803 TEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTY 862
EAI E + W AM E+ S+ N W L P G IG KWV+K K + G+V Y
Sbjct: 810 QEAI---EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERY 866
Query: 863 KARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLE 922
KARLVAKG+ Q G+DYDE F+PVA ++++R+++++AA + ++I QMDVK+AFLNG+L E
Sbjct: 867 KARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEE 926
Query: 923 DVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYK 982
+VY+ QP+G+ KV +L++++YGLKQA R+WN R D+ ++ FIK E +Y
Sbjct: 927 EVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYI 986
Query: 983 KVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRDRSQ 1042
K+ + LYVDD++ GN+ +E K + K F M D+G SY LGI + ++ +
Sbjct: 987 KIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNG 1046
Query: 1043 RLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAI 1102
+ ++Q Y +VL++F M +S PM G+ LSK +E + + + S +
Sbjct: 1047 --IFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK------KEEGEGVDPTTFKSLV 1098
Query: 1103 GSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG*EELS 1162
GS+ Y + CTRPD+ YA+ SRY +P ++ A K IL+Y++ T + L Y +
Sbjct: 1099 GSLRY-LTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYK 1157
Query: 1163 VIGYIDASF 1171
++GY D+ +
Sbjct: 1158 LVGYSDSDW 1166
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 545 bits (1405), Expect = e-155
Identities = 356/1145 (31%), Positives = 571/1145 (49%), Gaps = 86/1145 (7%)
Query: 77 SCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGP 136
S I+L+ L+K + +A M+ L LY +A R + L+S K+SE +
Sbjct: 76 SAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNRIYQKQKLYSFKMSENLSIEG 135
Query: 137 HVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGF--VHNFLMNDMDKTLPQLAAM 194
++ + + +L ++ E L+L SLP+ + + + + +L ++ A
Sbjct: 136 NIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYGLGRVTLSLDEVVAA 195
Query: 195 LRTAE-------KNMKGKGKVAAILMVNNGKFKKHHKKPNKSKGNGKGKIVAKPSTKALK 247
+ + E K++KG+ + + K K + + +GN ++ +++ K
Sbjct: 196 IYSKELELGSNKKSIKGQAEGLFV------KEKTETRGRTEQRGNNNNNKKSRSKSRSKK 249
Query: 248 PTGGVAKDDKCFYCNNAGHWK*NYPKYLEDKKNGNVPTTSAGIFVIEINMSTST----SW 303
C+ C + + NY + + G++V E ST W
Sbjct: 250 G---------CWICGESSNGSSNYSE-------------ANGLYVSEALSSTDIHLEDEW 287
Query: 304 VLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVLTLPSGLLLNLEN 363
V+DTGC H+ + A G V R+GN +GT + +G+++ L N
Sbjct: 288 VMDTGCSYHMTYKREWFEDLNEDAGGSV--RMGNKTVSKVRGIGTIRVKNEAGMVVRLTN 345
Query: 364 CYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDNILYANANLSNGLYVLDLDMPIYN 423
Y+P + RN++S+ +K+G+ F ++N S+ + + LY+L P+
Sbjct: 346 VRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLTVRRCYTLYLLQW-RPVTE 404
Query: 424 INAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFDFESYETCRSCLLGKMTKA 483
+ +K + T LWH RLGH+++ + L K G LD ETC C+ GK +
Sbjct: 405 ESLSVVKRQD--DTILWHRRLGHMSQKNMDLLLKKGLLDKKKVSKLETCEDCIYGKAKRI 462
Query: 484 PFTGQGERASDLLGLIHTDVCGPLNIT-ARGGFHYFITLTDDFSRFGYVYLMKHKSESFT 542
F + L +H+D+ G ++ + G YFI+ DD++R +Y +K K E+F
Sbjct: 463 GFNLAQHDTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFD 522
Query: 543 FFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTPQWNGVSER 602
F E+ N VENQ K+IK LR+D G E+ + FD + GIL T TPQ NGV+ER
Sbjct: 523 KFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAER 582
Query: 603 RNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVE-KTPYEIWNGRKPNVGH 661
NRTL++ VRSM+S + LP W A T A +N+ PS A+ + P + W+G+ P +
Sbjct: 583 MNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSPIYSY 642
Query: 662 FKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEKDF 721
+ +GC A++ KL +++K VGYP +GY + E VV++ +F E
Sbjct: 643 LRRFGCIAFV-HTDDGKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQENAS 701
Query: 722 VSRRISGSKVDLKEIQDPQSTEIPVE-------EQGQDTQTVMTE---NPAPVTQEP--- 768
+ + E + P S+ + ++ G D V + NP+P T +
Sbjct: 702 YKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPSPATTQTYSE 761
Query: 769 --RRSSRIRQEPERYGYLISQE-----GDVLLMDQD---------------EPVTYTEAI 806
+ I Q P Y + ++ V D+D EP Y+EA
Sbjct: 762 GVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPADYSEAK 821
Query: 807 TGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDG-KVSTYKAR 865
+ KW AM EM+S N W ++ P+ IG +W++K K+ + G + +KAR
Sbjct: 822 RSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKAR 881
Query: 866 LVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVY 925
LVAKG+ Q G+DY E F+PV SIRIL++I A D E+ Q+DVKTAFL+G L E +Y
Sbjct: 882 LVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGELKEKIY 941
Query: 926 MTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVY-KKV 984
M PEG+ + +VC L +S+YGLKQA + WN +F+ + + GFI++ + C Y K++
Sbjct: 942 MVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCAYIKEL 1001
Query: 985 SGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRDRSQRL 1044
S +L+LYVDD+L+ + + ++K L + F MKDLG A ILG+ I R+R +
Sbjct: 1002 SDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREENT 1061
Query: 1045 LGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGS 1104
L LSQ Y++K+L +NM ESK P+ + L + + + D M+ IPY+SA+GS
Sbjct: 1062 LWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQDEDYMKSIPYSSAVGS 1121
Query: 1105 IMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG*EELSVI 1164
IMYAMI TRPD++Y + SRY S P E+W+ VK +L+Y++ + T L Y + V+
Sbjct: 1122 IMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSSDFKVV 1181
Query: 1165 GYIDA 1169
GY DA
Sbjct: 1182 GYCDA 1186
>At4g21360 putative transposable element
Length = 1308
Score = 524 bits (1349), Expect = e-148
Identities = 360/1125 (32%), Positives = 558/1125 (49%), Gaps = 88/1125 (7%)
Query: 50 IPETPPAGASAALRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYE 109
+P+ S +N H+ D+V L K +TA ++ L L+
Sbjct: 72 VPDPIKFEQSDQAKNFIINHITDTV-------------LLKVQHCVTAAELWATLNKLFM 118
Query: 110 EQARHERFDVSKALFSTKLSEGGPVGPHVLKMIGYSENLARLGFVLEQELVVDLVLQSLP 169
E + R L+S K+ + + + + + L L + +E+ L+L SLP
Sbjct: 119 ETSLPNRIYTQLRLYSFKMVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLP 178
Query: 170 ESLNGFVHNFLMNDMDKTLPQLAAMLRTAEKNMKGKGKVAAILMVNNGKFKKHHKKPNKS 229
S H + ++ + + ++ E+ + + K + + +P
Sbjct: 179 PSYIQLKHTLKYGNKTLSVQDVVSSAKSLERELSEQ-KETIRAPASTALYTAERGRPQTK 237
Query: 230 KGNGKGKIVAKPSTKALKPTGGVAKDDKCFYCNNAGHWK*NYPKYLEDKKNGNVPTTSAG 289
G+GK + ++K+ C++C GH K + Y +K N AG
Sbjct: 238 NTQGQGKGRGRSNSKSRLT---------CWFCKKEGHVKKDC--YAGKRKLENEGQGKAG 286
Query: 290 IFVIEINMSTSTS---------WVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAK 340
+ ++ S + S WV+D+GC H+ + + S + +G+
Sbjct: 287 VITEKLVYSEALSMYDQEAKDKWVIDSGCTYHMTSRMDWF--SEFNENETTMILLGDDHT 344
Query: 341 VAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDN 400
V + GT + G + L+N +VP + RN+IS LDK G++ + Y +N
Sbjct: 345 VESKGSGTVKVNTHGGSIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKEN 404
Query: 401 ILYANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGF 460
NL NGLYVLD + N N NE T LWHCRLGH++ N + L + G
Sbjct: 405 KTALCGNLVNGLYVLD-GHTVVNENCNVEGSNE--KTELWHCRLGHMSLNNMKILAEKGL 461
Query: 461 LDSFDFESYETCRSCLLGKMTKAPFTGQGERASDLLGLIHTDVCGPLNITARGGFHYFIT 520
L+ D + C +C++GK K F ++LG IH D+ G YF++
Sbjct: 462 LEKKDIKELSFCENCVMGKSKKLSFNVGKHITDEVLGYIHADLWGK---------QYFLS 512
Query: 521 LTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLK 580
+ DD SR ++ +K K E+F F E++ VENQ+ KK+K+LR+D G E+ +L+FD K
Sbjct: 513 IIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCK 572
Query: 581 ECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVP 640
+ GI T TPQ NGV++R NRTL++ VR +++ + L W A TAAY +NR P
Sbjct: 573 QNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSP 632
Query: 641 SKAVE-KTPYEIWNGRKPNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYY 699
+ AV+ P E+W +KP H + +GC AY+ L KL+ ++ K F+GYP+ T+GY
Sbjct: 633 ASAVDHNVPEELWLDKKPGYKHLRRFGCIAYV-HLDQGKLKPRALKGVFLGYPQGTKGYK 691
Query: 700 FYKPPEGTIVVAKTGVFLEKDFVSRRISGSKVDLKEIQDPQST---EIPVEEQGQDTQT- 755
+ E V+++ VF E S+ +K+I D + ++ V+E G+ ++T
Sbjct: 692 VWLLDEEKCVISRNIVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTG 751
Query: 756 --------VMTENPAPVTQEPRRSS-----------RIRQEPERYGYLISQEGDVLLM-- 794
+++ VTQEP +S R R+ P L L +
Sbjct: 752 GVTIEEIDQESDSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVM 811
Query: 795 ----DQDEPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFK 850
+ +EP Y +A + KW MK E+DS+ N W++++ P+ I C+W+FK
Sbjct: 812 AEEIESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFK 871
Query: 851 KKIDMDG-KVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQM 909
K + G + YKARLVA+GF Q G+DY+E F+PV SIRIL++ D E+ QM
Sbjct: 872 LKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQM 931
Query: 910 DVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQY 969
DVKT FL+G L + +YM QPEGF +VC L++S+YGLKQA R WN +F +
Sbjct: 932 DVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSL 991
Query: 970 GFIKNEDEPCVY-KKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEA 1028
F ++E + CVY K+V+ +L+LYVDD+LL + ++K L F MKD+G A
Sbjct: 992 QFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAA 1051
Query: 1029 SYILGIRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSK--TQSPST 1086
S ILGI I R+R + L LSQ RY+DKV++RF M ++K PM + L+ + S
Sbjct: 1052 SRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSV 1111
Query: 1087 DDERDRMRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQSNPG 1131
D E +PY+SA+GS+MYAMI T PDV+YA+ SR+ S PG
Sbjct: 1112 DPE-----VVPYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRPG 1151
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 524 bits (1349), Expect = e-148
Identities = 371/1198 (30%), Positives = 579/1198 (47%), Gaps = 117/1198 (9%)
Query: 21 LTETNFIDWSRNMRIVL-THEKKLYVLDGPIPETPPAGASAALRNAHAKHLNDSVEVSCI 79
LT++N+ +WS M+ +L H+ V G I S ++ + C+
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCL 72
Query: 80 MLASMTPE-LQKQHEGMTAFDMIEHLKTLYE--EQARHERFDVSKALFST-KLSEGGPVG 135
+ + + +K E +A + E L+T Y+ +Q + R + F ++ EG V
Sbjct: 73 IYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVS 132
Query: 136 PHVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDK-----TLPQ 190
+ +++ + NL R G L+ +++ VL+SL F H + + K T+ Q
Sbjct: 133 DYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLK---FEHIVTVIEETKDLEAMTIEQ 189
Query: 191 LAAMLRTAEKNMKGKGKVAAILM----------------------------VNNGKFKKH 222
L L+ E+ K K + ++ NG+ +
Sbjct: 190 LLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWRP 249
Query: 223 HKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDKCFYCNNAGHWK*NYP---------- 272
H+ +G + K K+ V KC+ C GH+
Sbjct: 250 HEDNTNQRGENSSRGRGKGHPKSRYDKSSV----KCYNCGKFGHYASECKAPSNKKFKEK 305
Query: 273 -KYLEDKKNGNVPTTSAGIFVIEINMSTSTSWVLDTGCGSHICTDVQGLRKSRALAKGEV 331
Y+E+K A E + W LD+G +H+C + +G V
Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDE--QEENHKWYLDSGASNHMCGRKSMFAELDESVRGNV 363
Query: 332 DLRVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKN 391
L G+ +K+ G ++ L +G + N YY+P++ NI+S+ L + G++ +K+
Sbjct: 364 AL--GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKD 421
Query: 392 KCCSVY--LDNILYANANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINE 449
S+ N++ N ++VL+ I N A+ LK ++LWH R GH+N
Sbjct: 422 NNLSIRDKESNLITKVPMSKNRMFVLN----IRNDIAQCLKMCYKEESWLWHLRFGHLNF 477
Query: 450 NRISKLHKDGFLDSFDFESY--ETCRSCLLGKMTKAPFTGQGE-RASDLLGLIHTDVCGP 506
+ L + + ++ + C CLLG K F + RA L LIHTDVCGP
Sbjct: 478 GGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGP 537
Query: 507 LNITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDR 566
+ + G +YF+ DDFSR +VY +K KSE F FK+F+ VE + G IK +RSD
Sbjct: 538 IKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDS 597
Query: 567 GGEYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWG 626
GGE+ S EF + ++ GI QLT P +PQ NGV+ER+NRT+L+M RSM+ LP LW
Sbjct: 598 GGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWA 657
Query: 627 YALLTAAYTLNRVPSKAVE-KTPYEIWNGRKPNVGHFKIWG--CEAYIKRLMSTKLEQKS 683
A+ A Y LNR P+K+V KTP E W+GRKP V H +++G A++ KL+ KS
Sbjct: 658 EAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKS 717
Query: 684 EKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEK---DFVSRRISGSKVDLKEIQDPQ 740
EK F+GY ++GY Y P ++++ VF E+ D+ S + E P+
Sbjct: 718 EKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPE 777
Query: 741 ST-EIPVEEQGQDTQTVMTENPAPVTQEPRRSSRIRQEPERYGYLISQEGDVL--LMDQD 797
T E P E+ T T + + R+ R R E Y +QE L L +
Sbjct: 778 PTREEPPSEEPTTPPTSPTSSQIEESSS-ERTPRFRSIQELYEVTENQENLTLFCLFAEC 836
Query: 798 EPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDG 857
EP+ + EAI E + W AM E+ S+ N W L P G IG KWV+K K + G
Sbjct: 837 EPMDFQEAI---EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKG 893
Query: 858 KVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLN 917
+V YKARLVAKG+ Q G+DYDE F+PVA ++++R+++++AA + ++I QMDVK+AFLN
Sbjct: 894 EVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLN 953
Query: 918 GNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDE 977
G+L E+VY+ QP+G+ KV +L++ +YGLKQA R+WN R D+ ++ FIK E
Sbjct: 954 GDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
Query: 978 PCVYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIY 1037
+Y K+ + LYVDD++ GN+ +E K + K F M D+G SY LGI +
Sbjct: 1014 HALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVK 1073
Query: 1038 RDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIP 1097
++ + + ++Q Y +VL++F M +S
Sbjct: 1074 QEDNG--IFITQEGYAKEVLKKFKMDDSN------------------------------- 1100
Query: 1098 YASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIY 1155
S +GS+ Y + CTRPD+ YA+ SRY +P ++ A K IL+Y++ T + L Y
Sbjct: 1101 -PSLVGSLRY-LTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY 1156
>At3g25450 hypothetical protein
Length = 1343
Score = 514 bits (1324), Expect = e-145
Identities = 377/1210 (31%), Positives = 601/1210 (49%), Gaps = 105/1210 (8%)
Query: 16 IEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPETPPAGASAALRNAHAKHLNDSVE 75
I+ L N+ W+ M VL +++ L G I P A + L S+
Sbjct: 20 IQCPMLNSVNYTVWTMRMEAVL----RVHKLWGTIE---PGSADEEKNDMARALLFQSIP 72
Query: 76 VSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFST-KLSEGGPV 134
S I+ ++ KQ ++ I+ + L E+ + R A F K+ + +
Sbjct: 73 ESLIL------QVGKQKTSSAVWEAIKS-RNLGAERVKEARLQTLMAEFDKLKMKDSETI 125
Query: 135 GPHVLKMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMNDMD---KTLPQL 191
+V ++ + A LG +E+ +V L+SLP + L +D T +
Sbjct: 126 DDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDLKTTTFEDI 185
Query: 192 AAMLRTAEKNM-------KGKGKVAAIL---MVNNGKFKKHH--KKPNKSKGNGKGKIVA 239
A ++T E + + +GK+ + +V++ + ++ K K+K + +++
Sbjct: 186 AGRIKTYEDRVWDDDDSHEDQGKLMTEVEEEVVDDLEEEEEEVINKEIKAKSHVIDRLLK 245
Query: 240 KPSTKALKPTGGVAKDDKCFYCNNAGHWK*NYPKYLEDKKNGNVPTTSAGIFVIEINMST 299
+ K +DD + A + YL +K N+ T E+
Sbjct: 246 LIRLQEQKEK---EEDDT----HEAESLMMHEVVYLNEK---NIRPT-------ELESCI 288
Query: 300 STSWVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVLTLPSGLLL 359
+ +W LD G +H+ + K + G+V R G+ + + G+ G
Sbjct: 289 NNAWYLDNGASNHMTGNRAWFCKLDEMITGKV--RFGDDSCINIKGKGSIPFISKGGERK 346
Query: 360 NLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVY--LDNILYANANLSNGLYVLDL 417
L + YY+P + NI+S+ ++G + ++ +++ N+L N LY + L
Sbjct: 347 ILFDVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRLYKVSL 406
Query: 418 DMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGF---LDSFDFESYETCRS 474
++ N+K L+ N + +WH RLGHI+ I + K + S + ETC S
Sbjct: 407 EVE----NSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGS 462
Query: 475 CLLGKMTKAPFT-GQGERASDLLGLIHTDVCGPLNITARGGFHYFITLTDDFSRFGYVYL 533
CL GK + F RA+ +L LIH D+CGP++ + Y L DD SR+ + L
Sbjct: 463 CLFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSIL 522
Query: 534 MKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGT 593
+K KSE+F FKEF+ VE + G IK R+DRGGE+LS EF + GI LT P T
Sbjct: 523 LKEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYT 582
Query: 594 PQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVE-KTPYEIW 652
PQ NGV ERRNRTLL M RS++ H +PN+LWG A+ + Y +NRV ++++ +TPYE++
Sbjct: 583 PQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVF 642
Query: 653 NGRKPNVGHFKIWGCEAYIKRLMST--KLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVV 710
+KPNV H +++GC +Y K + KL+ +S ++G ++ Y P + I V
Sbjct: 643 KHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFV 702
Query: 711 AKTGVFLEKDFVSRRISGSKVD---------LKEI-----------QDPQSTEIPVEEQG 750
++ VF E + S S+ D L E +P+ TE E G
Sbjct: 703 SRDVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETE-EAEING 761
Query: 751 QDTQTVM---TENPAPVTQEPRRSSRIRQEPERYGYLIS-------QEGDVLLMDQDEPV 800
+D + TE +EP+ R +++ R YL + +LL DEP
Sbjct: 762 EDENIIEEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVNDEPW 821
Query: 801 TYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVS 860
+ EA E W +A K E+ S+ N+ W+L+D P G IG KWVFK K + DG ++
Sbjct: 822 DFKEANKSKE---WRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSIN 878
Query: 861 TYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNL 920
YKARLVAKG+ Q HGVD++E F+PVA I+++R+++A+AA + +EI +DVKTAFL+G L
Sbjct: 879 KYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGEL 938
Query: 921 LEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCV 980
EDVY++QPEGF + ++ +KV KL +++YGL+QA R+WN + +E +++ F K EP +
Sbjct: 939 REDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPSL 998
Query: 981 YKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRDR 1040
Y+K G + + +YVDD+L+ G+++ + K + F M DLG+ +Y LGI + + +
Sbjct: 999 YRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQSK 1058
Query: 1041 SQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYAS 1100
+ L Q RY K+L M + PM + L LSK Q DE D Y
Sbjct: 1059 DG--ITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETD------YRR 1110
Query: 1101 AIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG*EE 1160
IG + Y ++ TRPD+SY + SRY P + A+K IL+YL+ T L + E
Sbjct: 1111 NIGCLRY-LLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGEN 1169
Query: 1161 LSVIGYIDAS 1170
+IGY D+S
Sbjct: 1170 AGLIGYSDSS 1179
>At3g60170 putative protein
Length = 1339
Score = 514 bits (1323), Expect = e-145
Identities = 348/1177 (29%), Positives = 594/1177 (49%), Gaps = 77/1177 (6%)
Query: 29 WSRNMRIVLTHEKKLYVLDGPIPE----TPPAGASAALRNAHAKHLNDSVEVSCIMLASM 84
WS M L + +++ IP T P S A R+A + ++V + ++
Sbjct: 22 WSMTMENFLRSRELWRLVEEGIPAIVVGTTPV--SEAQRSAVEEAKLKDLKVKNFLFQAI 79
Query: 85 TPE-LQKQHEGMTAFDMIEHLKTLYEEQARHERFDVS---KALFSTKLSEGGPVGPHVLK 140
E L+ + T+ + E +K Y+ + +R + K + EG + + +
Sbjct: 80 DREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAMKEGEKIDTFLGR 139
Query: 141 MIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFL-MNDMDK-TLPQLAAMLRTA 198
+ + G V+EQ +V +L+SL N V + ND+ ++ +L L
Sbjct: 140 TLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLSTLSIDELHGSLLVH 199
Query: 199 EKNMKGKGKVAAILMVNNGKFKKHHKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDKC 258
E+ + G + L V H ++P++ +G G + ++ + +G +C
Sbjct: 200 EQRLNGHVQEEQALKVT------HEERPSQGRGRGVFR-GSRGRGRGRGRSGTNRAIVEC 252
Query: 259 FYCNNAGHWK*NYPKYLEDKKNGNVPTTSAGIFVIEINMSTSTS---WVLDTGCGSHICT 315
+ C+N GH++ P++ ++ + + + + + + W LD+GC +H+
Sbjct: 253 YKCHNLGHFQYECPEWEKNANYAELEEEEELLLMAYVEQNQANRDEVWFLDSGCSNHMTG 312
Query: 316 DVQGLRKSRALAKG-EVDLRVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNI 374
+ + L +G +++GN +++ + G+ + + +G+ + YYVP + N+
Sbjct: 313 SKEWFSE---LEEGFNRTVKLGNDTRMSVVGKGSVKVKV-NGVTQVIPEVYYVPELRNNL 368
Query: 375 ISISCLDKAGFEFTIKNKCCSVYLDN---ILYANANLSNGLYVLDLDMPIYNINAKRLKP 431
+S+ L + G I++ C VY + I+ N + N ++ L P N + +
Sbjct: 369 LSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMS-GNRMFFLLASKPQKNSLCLQTEE 427
Query: 432 NELNPTYLWHCRLGHINENRISKLHKDGFLDSFDF--ESYETCRSCLLGKMTKAPFTGQG 489
+LWHCR GH+N+ + L + + E C CL GK + + +
Sbjct: 428 VMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMSKKT 487
Query: 490 E-RASDLLGLIHTDVCGPLNITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQ 548
++S L L+H+D+CGP+ + G Y ++ DDF+R +VY + KSE+F FK F+
Sbjct: 488 SWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFK 547
Query: 549 NEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLL 608
VE ++G + LR+DRGGE+ S EF + GI QLT TPQ NGV+ER+NRT++
Sbjct: 548 ASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIM 607
Query: 609 DMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVE-KTPYEIWNGRKPNVGHFKIWGC 667
+ VRSM+S ++P W A + + NR P+ AVE TP E W+GRKP V +F+++GC
Sbjct: 608 NAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGC 667
Query: 668 EAY--IKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEK---DFV 722
Y I +KL+ KS+KC F+G +E++ + Y P IV++K VF E D+
Sbjct: 668 IGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWD 727
Query: 723 SRRISGSKVDLK----------EIQDPQSTEIPVEEQGQDTQTVMTENPAPVTQEPR--- 769
+ +V L+ E+ +P + P G D + AP + P
Sbjct: 728 QADVEAKEVTLECGDEDDEKNSEVVEPIAVASP-NHVGSDNNVSSSPILAPSSPAPSPVA 786
Query: 770 -RSSRIRQEPERYGYLISQEGD----------VLLMDQDEPVTYTEAITGPEFEKWLEAM 818
+ +R R+ P + EG+ +++M + +P+ + +A+ + W EAM
Sbjct: 787 AKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKD---KIWREAM 843
Query: 819 KSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVD 878
+ E++S+ N W L P+G PIG KWV+K K++ DG+V YKARLVAKG+ Q +G+D
Sbjct: 844 EHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGID 903
Query: 879 YDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKAT 938
Y E F+PVA + ++R +LAI++ ++EI+Q+DVK+AFL+G L E+VY+ QPEGF
Sbjct: 904 YTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEE 963
Query: 939 KKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYKKVSGSIVSFLILYVDD 998
+KV KL++++YGLKQA R+W R + + F + E ++ K + + LYVDD
Sbjct: 964 EKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDD 1023
Query: 999 ILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGRYIDKVLR 1058
++ G+D E K + F M DLG+ + LGI + +S + + Q RY +VL
Sbjct: 1024 LIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEV--KQSDGGIFICQRRYAREVLA 1081
Query: 1059 RFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRPDVSY 1118
RF M ES P+ G L+K D+ +++ + + +GS+MY + TRPD+ Y
Sbjct: 1082 RFGMDESNAVKNPIVPGTKLTK------DENGEKVDETMFKQLVGSLMYLTV-TRPDLMY 1134
Query: 1119 ALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIY 1155
+ SR+ SNP +W+A K IL+YL+ T + + Y
Sbjct: 1135 GVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFY 1171
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 503 bits (1294), Expect = e-142
Identities = 356/1141 (31%), Positives = 575/1141 (50%), Gaps = 114/1141 (9%)
Query: 96 TAFDMIEHLKT--LYEEQARHERFDVSKALFST-KLSEGGPVGPHVLKMIGYSENLARLG 152
T+ M E +KT L E+ + + A F + + + V ++ S LG
Sbjct: 48 TSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESLG 107
Query: 153 FVLEQELVVDLVLQSLPESLNGFVHNFLMNDMDKTLPQLAAMLRTAEKNMKGKGKVAAIL 212
+E+ +V L+SLP ++H + L Q+ + T +++ G+ K
Sbjct: 108 EEIEESKIVKKFLKSLPRKK--YIH------IIAALEQILDLNTTGFEDIVGRMKTYEDR 159
Query: 213 MVNN-------GKFKKHHKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDDK---CFYCN 262
+ + GK + + + G+G+ + S + G +D C+ C+
Sbjct: 160 VCDEDDSPEEQGKLMYANSESSYDTRGGRGRGRGRSSGRGRGGYGYQQRDKSKVICYRCD 219
Query: 263 NAGHWK*N-------YPKYLEDKKNGNVPTTSAGIFVIEI-------------NMSTSTS 302
GH+ K E ++N + + E+ + S
Sbjct: 220 KTGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERSVKPKEFEACSDNS 279
Query: 303 WVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVLTLPSGLLLNLE 362
W LD G +H+ ++Q K + G+V R G+ +++ G+ VL G+ L
Sbjct: 280 WYLDNGASNHMTGNLQWFSKLNEMITGKV--RFGDDSRIDIKGKGSIVLITKGGIRKTLT 337
Query: 363 NCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVY-LDNILYANANLS-NGLYVLDLDMP 420
+ Y++P + NIIS+ +AG + +K+ +++ + L A S N LY +DL+
Sbjct: 338 DVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKVDLN-- 395
Query: 421 IYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFDFESYETCRSCLLGKM 480
+ N+ +L+ + L +G IS + K+ ETC SCLLGK
Sbjct: 396 VENVKCLQLEAATMVRKELV---IG------ISNIPKEK----------ETCGSCLLGKQ 436
Query: 481 TKAPFT-GQGERASDLLGLIHTDVCGPLNITARGGFHYFITLTDDFSRFGYVYLMKHKSE 539
+ PF RAS +L L+H D+CGP+ + Y + L DD +R+ + L+K KSE
Sbjct: 437 ARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSE 496
Query: 540 SFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTPQWNGV 599
+F F++F+ +VE + G KIK R+D+GGE++S EF + + GI LT P TPQ NGV
Sbjct: 497 AFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGV 556
Query: 600 SERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVE-KTPYEIWNGRKPN 658
ERRNRTLL M RS++ H ++PN+LWG A+ + Y +NRV +++++ +TPYE++ RKPN
Sbjct: 557 VERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPN 616
Query: 659 VGHFKIWGCEAY--IKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVF 716
V H +++GC Y I+ KL+ +S+ ++G ++ Y P I+ +
Sbjct: 617 VEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIK-----W 671
Query: 717 LEKDFVSRRISGS---------------KVDLKEIQDPQSTEIPVEEQGQDTQTVMTENP 761
D +R ISG+ D++ ++ + +E EE+G++ +
Sbjct: 672 NNSDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQID 731
Query: 762 APVTQEP--------RRSSRIRQEP---ERYGYLISQEGD-VLLMDQDEPVTYTEAITGP 809
A TQ RRS+R +P + Y + EG+ VLL DEP + EA
Sbjct: 732 AEETQPSHATPLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLLAINDEPWDFKEA---N 788
Query: 810 EFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAK 869
+ ++W +A K E+ S+ N+ W+LID P IG KWVFK K + DG ++ YKARLVAK
Sbjct: 789 KLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAK 848
Query: 870 GFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQP 929
G+ Q HG+DYDE F+ VA I++IR+++A+AA + +E+ +DVKTAFL+G L EDVY+TQP
Sbjct: 849 GYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQP 908
Query: 930 EGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYKKVSGSIV 989
EGF + KV KL +++YGLKQA R+WN + ++ +Q+ F+K EP VY++ +
Sbjct: 909 EGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKL 968
Query: 990 SFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQ 1049
+ +YVDD+L+ G+ + + K + F M DLG+ +Y LGI + ++ + L Q
Sbjct: 969 LIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGII--LRQ 1026
Query: 1050 GRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAM 1109
RY K++ M IPM++GL L K Q ERD Y IG + Y +
Sbjct: 1027 ERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERD------YRRMIGCLRY-I 1079
Query: 1110 ICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG*EELSVIGYIDA 1169
+ TRPD+SY + SRY P + A+K +L+YL+ T L + ++GY D+
Sbjct: 1080 VHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDS 1139
Query: 1170 S 1170
S
Sbjct: 1140 S 1140
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 475 bits (1222), Expect = e-134
Identities = 340/1139 (29%), Positives = 551/1139 (47%), Gaps = 123/1139 (10%)
Query: 88 LQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSE---GGPVGPHVLKMIGY 144
LQK+ T+ D+ E +K Y+ R + + + S ++ E G + + +++
Sbjct: 45 LQKE----TSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMKIGETITGYFSRVMEI 100
Query: 145 SENLARLGFVLEQELVVDLVLQSLPESLNGFVHNF--LMNDMDKTLPQLAAMLRTAEKNM 202
+ ++ LG + VV+ +L++L E V N + T+ L + L E+N+
Sbjct: 101 TNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELTVDGLQSSLMVHEQNL 160
Query: 203 KGKGKVAAILMVNNGKFKKHHKKPNKSKGNGKGKIVAKPSTKALKPTGGVAKDD-KCFYC 261
+L + S G+G+ + G V +D +CF C
Sbjct: 161 SRHDVEERVLKAETQWRPDGGRGRGGSPSRGRGR-----GGYQGRGRGYVNRDTVECFKC 215
Query: 262 NNAGHWK*NYPKYLEDKKNGNVPTTSAGIFVI----EINMSTSTSWVLDTGCGSHICTDV 317
+ GH+K P + +K N + ++ +I W LD+GC +H+C
Sbjct: 216 HKMGHYKAECPSW---EKEANYVEMEEDLLLMAHVEQIGDEEKQIWFLDSGCSNHMCGTR 272
Query: 318 QGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVLTLPSGLLLNLENCYYVPAISRNIISI 377
+ + + K V R+G+ ++A G L + G + + + Y+VP + N+ S+
Sbjct: 273 EWFLELDSGFKQNV--RLGDDRRMAVEGKGKLRLEV-DGRIQVISDVYFVPGLKNNLFSV 329
Query: 378 SCLDKAGFEFTIKNKCCSVYLDN----ILYANANLSNGLYVLDLDMPIYNINAKRLKPNE 433
L + G F I+ C V+ ++++ + V R
Sbjct: 330 GQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVI 389
Query: 434 LNPTYLWHCRLGHINENRISKLHKDGF---LDSFDF-ESYETCRSCLLGKMTKAPFTGQG 489
+WH R GH+N + L + L FD E C CL GK + +
Sbjct: 390 GKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKES 449
Query: 490 E-RASDLLGLIHTDVCGPLNITARGGFHYFITLTDDFSRFGYVYLMKHKSESFTFFKEFQ 548
+++ +L L+HTD+CGP+N + G Y + DDFSR + YL+ KSE+F FFKEF+
Sbjct: 450 AWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFK 509
Query: 549 NEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGILSQLTPPGTPQWNGVSERRNRTLL 608
EVE + GKK+ LRSDRGGEY S EFD + KE GI QLT TPQ NGV+ER+NR+++
Sbjct: 510 AEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVM 569
Query: 609 DMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAVEK-TPYEIWNGRKPNVGHFKIWGC 667
+M R M+ +P W A+ A Y LNR PSKA+ TP E W+ KP+V H +I+G
Sbjct: 570 NMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGS 629
Query: 668 EAY--IKRLMSTKLEQKSEKCFFVGYPKETRGYYFYKPPEGTIVVAKTGVFLEK------ 719
AY + KL++KS KC G KE++ Y Y P G I++++ F E+
Sbjct: 630 LAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWE 689
Query: 720 -------------DFVSRRISGSKVDLKEIQDPQSTEIPVEEQGQDTQTVMTENPAPVTQ 766
D G +++ QD + TE EE+ +TV PA T
Sbjct: 690 DKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETE---EEEETVAETVHQNLPAVGTG 746
Query: 767 EPRRSSRIRQEPE--------RYGYLISQEGD----VLLMDQDEPVTYTEAITGPEFEKW 814
R+ RQ+P LI+Q+ + L + D+PV + EA + E W
Sbjct: 747 GVRQ----RQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPDDPVCFEEAA---QLEVW 799
Query: 815 LEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQI 874
+AM++E+ S+ N W L++ PE IG KW+FK K + G+V +KARLVAKG+ Q
Sbjct: 800 RKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQR 859
Query: 875 HGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGD 934
+GVD+ E F+PVA +IR++L +AA + ++Q+DVK+AFL+G+L EDV++ QP+GF
Sbjct: 860 YGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEV 919
Query: 935 PKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDEPCVYKKVSGSIVSFLIL 994
+ + KV KL++++YGLKQA R+W R +E + GF K E ++ K S + +
Sbjct: 920 EEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVSV 979
Query: 995 YVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGRYID 1054
YVDD++ G+ + ++ K + + F+M DLG+ Y LG+ + +D +R + ++Q +Y
Sbjct: 980 YVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQD--ERGIFINQRKYAA 1037
Query: 1055 KVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIPYASAIGSIMYAMICTRP 1114
++++++ M P+ G L+K
Sbjct: 1038 EIIKKYGMEGCNSVKNPIVPGQKLTKA--------------------------------- 1064
Query: 1115 DVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIY--GG*EELSVIGYIDASF 1171
A SRY +P ++ +AVK IL+Y++ T D + Y GG EL +G++D+ +
Sbjct: 1065 ------GAVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATEL--VGFVDSDY 1115
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 463 bits (1192), Expect = e-130
Identities = 347/1218 (28%), Positives = 579/1218 (47%), Gaps = 113/1218 (9%)
Query: 29 WSRNMRIVLTHEKKLYVLDGPIPETPPAGASAALRNAHAKHL------NDSVEVSCIMLA 82
WS M + K V++ +P P A A AK L ND++ + + A
Sbjct: 20 WSIKMATIFRTRKLWSVVEEGVP-VEPVQAEETPETARAKTLREEAVTNDTMALQILQTA 78
Query: 83 SMTPELQKQHEGMTAFDMIEHLKTLYE--EQARHERFDVSKALFST-KLSEGGPVGPHVL 139
+ ++ + + LK Y+ Q R + + + K+ + +
Sbjct: 79 VTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMYDNDNIKTFTD 138
Query: 140 KMIGYSENLARLGFVLEQELVVDLVLQSLPESLNGFVHNFLMN-DMDK-TLPQLAAMLRT 197
K+I L G ++ +L SLP + V D+D T+ +L +L+
Sbjct: 139 KLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALTMSELLGILKA 198
Query: 198 AEKNMKGKG---KVAAILMVNNGKFK--KHHKKPNKSKGNGKGKIVAKPSTKALKPTGGV 252
E + + K A + + G+ K N+ + K K S +
Sbjct: 199 QEARVTAREESTKEGAFYVRSKGRESGFKQDNTNNRVNQDKKWCGFHKSSKHTEEECREK 258
Query: 253 AKDD----------KCFYCNNAGHWK*NYPKYLEDKKNGNVPTTSAGIFVIEINMSTSTS 302
K+D KC+ C GH Y K T V E +M S S
Sbjct: 259 PKNDDHGKNKRSNIKCYKCGKIGH----YANECRSKNKERAHVTLEEEDVNEDHMLFSAS 314
Query: 303 -----------WVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGTYVL 351
W++D+GC +H+ + + K V +RV NG V G +
Sbjct: 315 EEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIK--VPIRVRNGDIVMTAGKGDITV 372
Query: 352 TLPSGLLLNLENCYYVPAISRNIISISCLDKAGFEFTIKNKCCSVYLDNILYANANLSNG 411
G + ++N + VP + +N++S+ + +G+ ++K C + +NG
Sbjct: 373 MTRHGKRI-IKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCII----------QDANG 421
Query: 412 LYVLDLDMPIYNINAKRLKPNE------LNPTYLWHCRLGHINENRISKLHKDGFLDSFD 465
+++++M + K E + WH RLGH++ R+ ++ ++
Sbjct: 422 KEIMNIEMTDKSFKIKLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDKELVNGLP 481
Query: 466 -FE-SYETCRSCLLGKMTKAPFTGQGE-RASDLLGLIHTDVCGPLNITARGGFHYFITLT 522
F+ + ETC++C LGK ++ F + + + + L ++HTDVCGP+ + G Y++
Sbjct: 482 RFKVTKETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFL 541
Query: 523 DDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKEC 582
DD++ +VY +K KSE+F FK+F+ VE Q IK LR + ++
Sbjct: 542 DDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRP----------MEVFCEDE 591
Query: 583 GILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSK 642
GI Q+T P +PQ NG +ER+NR+L++M RSM+ +LP LW A+ T+AY NR+PSK
Sbjct: 592 GINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSK 651
Query: 643 AVEK--TPYEIWNGRKPNVGHFKIWG--CEAYIKRLMSTKLEQKSEKCFFVGYPKETRGY 698
A+E TP E W G KPNV H +I+G C +I KL+ K++ +GY +T+GY
Sbjct: 652 AIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGY 711
Query: 699 YFYKPPEGTIVVAKTGVFLE--------KDFVSRRISGSKVDLKEIQDPQSTEIPVEEQ- 749
+ + + V++ VF E ++ V + S D++E +D Q T Q
Sbjct: 712 RVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQI 771
Query: 750 --------GQDTQTVMTE----NPAPVTQEPRRSSRIRQEPERYGYLISQEG----DVLL 793
G+ + V+++ ++ P++ +++ E+ + + E + L
Sbjct: 772 DDHANNGEGETSSHVLSQVNDQEERETSESPKKYKSMKEILEKAPRMENDEAAQGIEACL 831
Query: 794 MDQDEPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKI 853
+ +EP TY EA E W EAM E+ + N+ W L+D PE N I KW++K K
Sbjct: 832 VANEEPQTYDEARGDKE---WEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKT 888
Query: 854 DMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKT 913
D G +KARLVA+GF Q +G+DY ETF+PV+ +IR LLA AA + ++QMDVK+
Sbjct: 889 DASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKS 948
Query: 914 AFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIK 973
AFLNG L E+VY+TQP GF +KV +L +++YGLKQA R+W R D Q GF +
Sbjct: 949 AFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFAR 1008
Query: 974 NEDEPCVYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILG 1033
+ ++ +Y K G V + LYVDD+++ GN+ + K ++ F M DLG +Y LG
Sbjct: 1009 SMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLG 1068
Query: 1034 IRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRM 1093
+ + +D S + LSQ +Y +K++ +F M ESK +S+ L + D+++
Sbjct: 1069 MEVNQDDSG--IFLSQEKYANKLIDKFGMKESKS----VSTPLTPQGKRKGVEGDDKEFA 1122
Query: 1094 RDIPYASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFL 1153
Y +G ++Y + +RPDV YA S SRY S+P +++ K +L+Y++ T + +
Sbjct: 1123 DPTKYRRIVGGLLY-LCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGV 1181
Query: 1154 IYGG*EELSVIGYIDASF 1171
++ E ++GY D+ +
Sbjct: 1182 LFTSKETPRLVGYSDSDW 1199
>At2g19840 copia-like retroelement pol polyprotein
Length = 1137
Score = 444 bits (1141), Expect = e-124
Identities = 262/701 (37%), Positives = 390/701 (55%), Gaps = 61/701 (8%)
Query: 522 TDDFSRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKE 581
T+D+SR +VY +K K E+F F E++ VE Q +K+K LR+D G E+ + +FD K+
Sbjct: 318 TNDWSRKVWVYFLKTKDEAFASFTEWKKMVETQSERKLKHLRTDNGLEFCNHKFDEVCKK 377
Query: 582 CGILSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPS 641
GI+ T TPQ NGV+ER NRT+++ VRSM+S + L W A TA Y +NR PS
Sbjct: 378 EGIVRHRTCTYTPQQNGVAERLNRTIMNKVRSMLSESGLDKKFWAKAASTAVYLINRSPS 437
Query: 642 KAVE-KTPYEIWNGRKPNVGHFKIWGCEAYIKRLMSTKLEQKSEKCFFVGYPKETRGYYF 700
++E K P E+W PN K +GC Y+ KL+ +++K FVGYP +G+
Sbjct: 438 SSIENKIPEELWTSAVPNFSGLKRFGCVVYVYS-QEGKLDPRAKKGVFVGYPNGVKGFRV 496
Query: 701 YKPPEGTIVVAKTGVFLE----KDFVSRRISGSKVDL----------------------- 733
+ E +++ VF E KD +++ SG D
Sbjct: 497 WMIEEERCSISRNVVFREDVMYKDILNQSTSGMSFDFPLATNRIPSFECAGNRKEDEISV 556
Query: 734 -----------KEIQDPQSTEIPVEEQGQDTQTVMTENPAPVTQEPRR------SSRIRQ 776
+ P ST + GQ T + + P T+ P + + +
Sbjct: 557 QGGVSDDDTKQSSEESPISTGSSGQNSGQRTYQIARDKPKRQTKIPDKLRDYELNEEVLD 616
Query: 777 EPERYGYLISQEGDVLLMDQDEPVTYTEAITGPEFEKWLEAMKSEMDSMYTNQVWNLIDA 836
E Y Y+I+++G EP Y +A+ +++ WL+A+ E++S+ N W L++
Sbjct: 617 EIAGYAYMITEDG-----GNPEPNDYQKALQDSDYKMWLKAVDEEIESLLKNNTWVLVNR 671
Query: 837 PEGINPIGCKWVFKKKIDMDG-KVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRIL 895
+ PIGCKWVFK+K + G + +KARLV KG+ Q G+DY E FSPV SIR+L
Sbjct: 672 DQFQKPIGCKWVFKRKSGIVGVEKPRFKARLVVKGYSQKEGIDYQEIFSPVVKHVSIRLL 731
Query: 896 LAIAAYHDYEIWQMDVKTAFLNGNLLEDVYMTQPEGFGDPKATKKVCKLQRSIYGLKQAS 955
L++ + D E+ QMDVKTAFL+G L E +Y+ QPEG+ + KVC L+RS+YGL+Q+
Sbjct: 732 LSMVTHCDMELQQMDVKTAFLHGYLDETIYIEQPEGYVHKRYPDKVCLLKRSLYGLRQSP 791
Query: 956 RSWNLRFDETVQQYGFIKNEDEPCVY-KKVSGSIVSFLILYVDDILLIGNDIPTLQEIKT 1014
R WN RF+E +Q+ G+ +++ + CVY K++ +L+LYVDDIL+ D T+ ++K
Sbjct: 792 RQWNNRFNEFMQKIGYERSKYDSCVYFKELQSGEYIYLLLYVDDILIASRDKRTVCDLKA 851
Query: 1015 WLRKCFSMKDLGEASYILGIRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSS 1074
L F MKDLG+A ILG+ I RDR + +SQ Y+ KVL F M ++K F PM +
Sbjct: 852 LLNSEFEMKDLGDAKKILGMEIVRDRKAGTMSISQEGYLLKVLGNFGMDQAKPVFTPMGA 911
Query: 1075 GLNLSKTQSPSTDDERDR----MRDIPYASAIGSIMYAMICTRPDVSYALSATSRYQSNP 1130
L P+TD+E R MR +PY SA+GS+MY+MI TRPD+++++ R+ S P
Sbjct: 912 HFKL----KPATDEEVMRQSEVMRAVPYQSAVGSLMYSMIGTRPDLAHSVGLVCRFMSKP 967
Query: 1131 GNEYWIAVKNILKYLRRTKDTFLIYGG*EELSVIGYIDASF 1171
E+W AVK IL+Y+R + D L Y EL + GY D+ +
Sbjct: 968 LKEHWQAVKWILRYIRGSIDRKLCYKNEGELILEGYCDSDY 1008
Score = 43.9 bits (102), Expect = 5e-04
Identities = 55/277 (19%), Positives = 103/277 (36%), Gaps = 36/277 (12%)
Query: 52 ETPPAGASAALRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQ 111
E+ PA + A+ D + I + L+ TA + L LY +
Sbjct: 21 ESDPAKKKQRIEEEKARIDQDEKAMDMIFINVGDKVLRNIENSKTAAEAWATLDKLYLVK 80
Query: 112 ARHERFDVSKALFSTKLSEGGPVGPHVLKMIGYSENLARLGFVLEQELVVDLVLQSLPES 171
+ R + +++ ++ + + +V + +L L + E+ L+L +LP+S
Sbjct: 81 SLPNRVYLQLKVYNYRMQDSKTLEENVDEFQKMISDLNNLQIQVPDEVQAILILSALPDS 140
Query: 172 LNGFVHNFLMNDMDKTLPQLAAMLRTAEKNMKGKGKVAAILMVNNGKFKKHHKKPNKSKG 231
+ ML+ K + K+ ++ K + S+
Sbjct: 141 YD--------------------MLKETLKYGREGIKLDDVISAAKSKELELRDSSGGSRP 180
Query: 232 NGKGKIVAKPSTKALKPTGGVAKDDK--CFYCNNAGHWK*NYPKYLEDKKNGNVPTTS-- 287
G+G V + ++A G + + K C+ C GH+K K+LE K T+
Sbjct: 181 VGEGLYV-RGKSQARGSDGPKSTEGKKVCWICGKEGHFKRQCYKWLEKNKANGAGETALV 239
Query: 288 -------AGIFVIEINMSTSTS----WVLDTGCGSHI 313
G+ E+NMS W++DTGC H+
Sbjct: 240 KDDAQDLVGLVASEVNMSEGKDDQEEWIMDTGCSFHM 276
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 417 bits (1073), Expect = e-116
Identities = 273/916 (29%), Positives = 443/916 (47%), Gaps = 61/916 (6%)
Query: 289 GIFVIEINMSTSTSWVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGT 348
GI + N +S +WV+D+G H+ D + + V+L G +++ VGT
Sbjct: 428 GILAVSHNSLSSDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISG--VGT 485
Query: 349 YVLTLPSGLLLNLENCYYVPAISRNIISISCLDK-AGFEFTIKNKCCSVY--LDNILYAN 405
++ + L+N ++P N+ISIS L G CC + +
Sbjct: 486 VLINKD----IILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGE 541
Query: 406 ANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFD 465
LYVLD P ++NA + +WH RLGH + +R+ L +
Sbjct: 542 GKRIGNLYVLDTQSPAISVNA-------VVDVSVWHKRLGHPSFSRLDSLSEVLGTTRHK 594
Query: 466 FESYETCRSCLLGKMTKAPFTGQGERASDLLGLIHTDVCGPLNITARGGFHYFITLTDDF 525
+ C C L K K F + L+H DV GP ++ G+ YF+T+ DD
Sbjct: 595 NKKSAYCHVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDH 654
Query: 526 SRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGIL 585
SR ++YL+K KS+ T F F + VENQ ++K +RSD E L F K GI+
Sbjct: 655 SRATWIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKE---LAFTEFYKAKGIV 711
Query: 586 SQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSKAV- 644
S + P TP+ N V ER+++ +L++ R++M + + WG +LTA + +NR PS +
Sbjct: 712 SFHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLS 771
Query: 645 EKTPYEIWNGRKPNVGHFKIWGCEAY--IKRLMSTKLEQKSEKCFFVGYPKETRGYYFYK 702
KTP+E+ G+ P+ K +GC Y K +S C F+GYP +GY
Sbjct: 772 NKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLD 831
Query: 703 PPEGTIVVAKTGVFLEKDFVSRRISGSKVDLKEIQDPQSTEIPVEEQGQDTQTVMTENPA 762
+ +++ F E+ F S ++ P P+ T + + +
Sbjct: 832 LESNVVHISRNVEFHEELFPLASSQQSATTASDVFTPMD---PLSSGNSITSHLPSPQIS 888
Query: 763 PVTQEPRRSSRIRQEP----ERYGYLISQE-----GDVLLMDQDEP--VTYTEAIT---- 807
P TQ +R RI + P + + Y ++++ L Q P + Y I+
Sbjct: 889 PSTQISKR--RITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPI 946
Query: 808 ------GPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVST 861
+ ++W A+ E+ +M W + P G +GCKWVF K DG +
Sbjct: 947 PQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLER 1006
Query: 862 YKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAFLNGNLL 921
+KAR+VAKG+ Q G+DY ETFSPVA + ++++LL ++A + + Q+D+ AFLNG+L
Sbjct: 1007 FKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLE 1066
Query: 922 EDVYMTQPEGFGDPKAT----KKVCKLQRSIYGLKQASRSWNLRFDETVQQYGFIKNEDE 977
E +YM P+G+ D K T VC+L++SIYGLKQASR W L+F ++ GF K +
Sbjct: 1067 ETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGD 1126
Query: 978 PCVYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYILGIRIY 1037
++ + GS L++YVDDI++ Q + L+ F +++LG Y LG+ +
Sbjct: 1127 HTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEV- 1185
Query: 1038 RDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERDRMRDIP 1097
R+ + LSQ +Y ++L +M + K IPM+ + LSK +D+
Sbjct: 1186 -ARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKE------M 1238
Query: 1098 YASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKDTFLIYGG 1157
Y +G +MY I TRPD+++A++ ++ S P + AV +L+Y++ T L Y
Sbjct: 1239 YRRLVGKLMYLTI-TRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSA 1297
Query: 1158 *EELSVIGYIDASFQT 1173
++L++ GY DA + T
Sbjct: 1298 EDDLTLKGYTDADWGT 1313
Score = 32.0 bits (71), Expect = 2.1
Identities = 16/36 (44%), Positives = 21/36 (57%)
Query: 16 IEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIP 51
I +L ET + DWS MRI L + KL +DG +P
Sbjct: 78 IISHRLDETTYGDWSVAMRISLDAKNKLGFVDGSLP 113
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 412 bits (1060), Expect = e-115
Identities = 276/921 (29%), Positives = 450/921 (47%), Gaps = 71/921 (7%)
Query: 289 GIFVIEINMSTSTSWVLDTGCGSHICTDVQGLRKSRALAKGEVDLRVGNGAKVAALAVGT 348
GI + + +S +WV+D+G H+ D V+L G K++ VGT
Sbjct: 417 GILTVARHTLSSATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISG--VGT 474
Query: 349 YVLTLPSGLLLNLENCYYVPAISRNIISISCL-DKAGFEFTIKNKCCSVY--LDNILYAN 405
L L +LL +N ++P N+ISIS L D G C + + +
Sbjct: 475 --LKLNDDILL--KNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQ 530
Query: 406 ANLSNGLYVLDLDMPIYNINAKRLKPNELNPTYLWHCRLGHINENRISKLHKDGFLDSFD 465
LY+LD+ ++NA + +WH RLGH + R+ +
Sbjct: 531 GRRVANLYLLDVGDQSISVNA-------VVDISMWHRRLGHASLQRLDAISDSLGTTRHK 583
Query: 466 FESYETCRSCLLGKMTKAPFTGQGERASDLLGLIHTDVCGPLNITARGGFHYFITLTDDF 525
+ + C C L K K F + ++ L+H DV GP ++ G+ YF+T+ DD
Sbjct: 584 NKGSDFCHVCHLAKQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDH 643
Query: 526 SRFGYVYLMKHKSESFTFFKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKECGIL 585
SR ++YL+K KSE T F F +VENQ K+K +RSD E L+F + E GI+
Sbjct: 644 SRATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPE---LKFTSFYAEKGIV 700
Query: 586 SQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHAELPNFLWGYALLTAAYTLNRVPSK-AV 644
S + P TP+ N V ER+++ +L++ R++M +++P LWG +LTA + +NR PS+ +
Sbjct: 701 SFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLM 760
Query: 645 EKTPYEIWNGRKPNVGHFKIWGCEAY--IKRLMSTKLEQKSEKCFFVGYPKETRGYYFYK 702
KTPYEI G P + +GC Y K + +S C F+GYP +GY
Sbjct: 761 NKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMD 820
Query: 703 PPEGTIVVAKTGVFLEKDFVSRRISGSKVDLKEIQDPQSTEIPVEEQ-GQDTQTVMTENP 761
T+ +++ F E+ F + GS+ LK + +PV DT + P
Sbjct: 821 LESNTVFISRNVQFHEEVFPLAKNPGSESSLKLF----TPMVPVSSGIISDTTHSPSSLP 876
Query: 762 APVTQEPRR--SSRIRQEPERYGYLISQEGDVLLMDQDEPVT--------------YTEA 805
+ ++ P + S R+R+ P +L + + D P++ Y
Sbjct: 877 SQISDLPPQISSQRVRKPP---AHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINN 933
Query: 806 IT----------GPEFEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDM 855
IT + ++W EA+ +E+ +M W + P+G +GCKWVF K
Sbjct: 934 ITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLA 993
Query: 856 DGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYEIWQMDVKTAF 915
DG + YKARLVAKG+ Q G+DY +TFSPVA + +I++LL ++A + + Q+DV AF
Sbjct: 994 DGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAF 1053
Query: 916 LNGNLLEDVYMTQPEGFGDPKA----TKKVCKLQRSIYGLKQASRSWNLRFDETVQQYGF 971
LNG L E+++M PEG+ + K + V +L+RSIYGLKQASR W +F ++ GF
Sbjct: 1054 LNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGF 1113
Query: 972 IKNEDEPCVYKKVSGSIVSFLILYVDDILLIGNDIPTLQEIKTWLRKCFSMKDLGEASYI 1031
K + ++ K+ +++YVDDI++ ++ L + F ++DLG+ Y
Sbjct: 1114 KKTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYF 1173
Query: 1032 LGIRIYRDRSQRLLGLSQGRYIDKVLRRFNMHESKKGFIPMSSGLNLSKTQSPSTDDERD 1091
LG+ + R + + + Q +Y ++L+ M K +PM L + K D+ D
Sbjct: 1174 LGLEVARTTAG--ISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRK-------DDGD 1224
Query: 1092 RMRDI-PYASAIGSIMYAMICTRPDVSYALSATSRYQSNPGNEYWIAVKNILKYLRRTKD 1150
+ DI Y +G +MY I TRPD+++A++ ++ S P + A +L+Y++ T
Sbjct: 1225 LIEDIEQYRRIVGKLMYLTI-TRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVG 1283
Query: 1151 TFLIYGG*EELSVIGYIDASF 1171
L Y +L++ G+ D+ +
Sbjct: 1284 QGLFYSASSDLTLKGFADSDW 1304
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,274,662
Number of Sequences: 26719
Number of extensions: 1230018
Number of successful extensions: 3627
Number of sequences better than 10.0: 136
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2858
Number of HSP's gapped (non-prelim): 291
length of query: 1173
length of database: 11,318,596
effective HSP length: 110
effective length of query: 1063
effective length of database: 8,379,506
effective search space: 8907414878
effective search space used: 8907414878
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Medicago: description of AC149496.11