BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149495.3 + phase: 0
(412 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g12560 putative protein 191 6e-49
At4g22390 unknown protein 135 3e-32
At3g06240 unknown protein 114 1e-25
At3g07870 unknown protein 110 1e-24
At3g23880 unknown protein 83 3e-16
At3g21410 hypothetical protein 80 3e-15
At3g17710 unknown protein 72 6e-13
At2g27520 hypothetical protein 71 1e-12
At3g10430 hypothetical protein 70 2e-12
At2g21930 unknown protein 69 4e-12
At3g16210 hypothetical protein 69 6e-12
At3g23260 unknown protein 68 1e-11
At3g17490 hypothetical protein 67 2e-11
At1g47730 hypothetical protein 67 2e-11
At3g22650 hypothetical protein 67 2e-11
At1g33530 hypothetical protein 66 3e-11
At3g08750 hypothetical protein 64 1e-10
At2g40920 unknown protein 64 2e-10
At1g11620 hypothetical protein 63 3e-10
At3g52320 putative protein 63 3e-10
>At4g12560 putative protein
Length = 408
Score = 191 bits (485), Expect = 6e-49
Identities = 119/389 (30%), Positives = 206/389 (52%), Gaps = 43/389 (11%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFI--NLHRKNSLNRSFILRLRSNI 63
+P D + +IF RLP K+L+R R+ SK +I+ +FI +LHR ++ LR +
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDHLMILLRGAL 63
Query: 64 YQIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWNP 123
D +L + + HP R + GS NGL+ +SN + ++ ++NP
Sbjct: 64 RLYSVDLDSLDSVSDVEHPMKRGGPT-EVFGSSNGLIGLSN---------SPTDLAVFNP 113
Query: 124 NIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRL-SWLVSLQNPF--- 179
+ R+ H +P + + S + +G G+D ++ DYK++R+ + + ++
Sbjct: 114 STRQIHRLPPSSIDLPDGSSTR---GYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCS 170
Query: 180 YDPHVRLFSLKTNSWKIIPTMP----------YALVFAQTMGVLVEDSIHWIMAKKLDGL 229
+ V++FSLK NSWK I ++ Y L++ + GVL +S+HW++ ++ +
Sbjct: 171 FPYEVKVFSLKKNSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLI 230
Query: 230 HPSLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVW 289
+LIV F+L LE F V P+ + N N +++D+ L GCLC+ NY+ + +DVW
Sbjct: 231 AFNLIVRFDLALEEFEIVRFPEAVA----NGNVDIQMDIGVLDGCLCLMCNYDQSYVDVW 286
Query: 290 VMKQYGLKDSWCKLFTMMKSCVTSHLKSSSPLCYSSDGSKVLIEGIEVLLEVHHKKLFWY 349
+MK+Y ++DSW K+FT+ K PL YS D K VLLE+++ KL W+
Sbjct: 287 MMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYSKDKKK-------VLLELNNTKLVWF 339
Query: 350 DLKTEQVS---YEEIPDFNGAKICVGSLV 375
DL+++++S ++ P A++ V SLV
Sbjct: 340 DLESKKMSTLRIKDCPSSYSAELVVSSLV 368
>At4g22390 unknown protein
Length = 401
Score = 135 bits (341), Expect = 3e-32
Identities = 108/389 (27%), Positives = 184/389 (46%), Gaps = 49/389 (12%)
Query: 7 PPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRS----FILRLRSN 62
P D + E+F RL +L++ R SK S+IDS F++ H + L +LR
Sbjct: 5 PTDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPEFVSSHLRRRLETGEHLMILLRGPRL 64
Query: 63 IYQIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWN 122
+ +E D + +P HP + GS NG++ + N + ++ I+N
Sbjct: 65 LRTVELDSPENVSDIP--HPLQAGGFT-EVFGSFNGVIGLCNSPV---------DLAIFN 112
Query: 123 PNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSW--LVSLQNPFY 180
P+ RK H +P P+ R D+ +G G+D + D+K++R+ L + F
Sbjct: 113 PSTRKIHRLPIEPIDFPER---DITREYVFYGLGYDSVGDDFKVVRIVQCKLKEGKKKFP 169
Query: 181 DP-HVRLFSLKTNSWKIIPTM----------PYALVFAQTMGVLVEDSIHWIMAKKLDGL 229
P V++FSLK NSWK + M Y L+ + GV+V + +HWI+ ++ +
Sbjct: 170 CPVEVKVFSLKKNSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHLHWILPRRQGVI 229
Query: 230 HPSLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVW 289
+ I+ ++L + + P E+ E+ +D+ L GC+C+ E + +DVW
Sbjct: 230 AFNAIIKYDLASDDIGVLSFPQELYIED-------NMDIGVLDGCVCLMCYDEYSHVDVW 282
Query: 290 VMKQYGLKDSWCKLFTMMKSCVTSHLKSSSPLCYSSDGSKVLIEGIEVLLEVHH-KKLFW 348
V+K+Y SW KL+ + K ++ PL S D SK +LLE+++ L W
Sbjct: 283 VLKEYEDYKSWTKLYRVPKPESVESVEFIRPLICSKDRSK-------ILLEINNAANLMW 335
Query: 349 YDLKTEQVSYE--EIPDFNGAKICVGSLV 375
+DL+++ ++ E A I V SLV
Sbjct: 336 FDLESQSLTTAGIECDSSFTADILVSSLV 364
>At3g06240 unknown protein
Length = 427
Score = 114 bits (284), Expect = 1e-25
Identities = 104/375 (27%), Positives = 163/375 (42%), Gaps = 78/375 (20%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRK--------NSLNRSFIL 57
LPP+ + EI RLP KS+ RFR SK ++ F +H SL+R I+
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESVRSLHRKLIV 95
Query: 58 RLRSNIYQIEDDFSNL------TTAVPLNHPFT----------RNSTN------------ 89
N+Y + DF+++ AV N+P RN
Sbjct: 96 SSH-NLYSL--DFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRRVMLK 152
Query: 90 ----------IALIGSCNGLLAVSNGEIALRHPNAANEITIWNPNIRKHHIIPFLPLPIT 139
+ ++GS NGL+ +S GE A + ++NP LP
Sbjct: 153 LNAKSYRRNWVEIVGSSNGLVCISPGEGA---------VFLYNPTTGDSKR---LPENFR 200
Query: 140 PRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLVSLQNPFYDPHVRLFSLKTNSWKIIPT 199
P+S + +GFGFD LT DYK+++L V+ D V +SLK +SW+ I
Sbjct: 201 PKSVEYERDNFQTYGFGFDGLTDDYKLVKL---VATSEDILDASV--YSLKADSWRRICN 255
Query: 200 MPYALVFAQ-TMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLTLEIFNEVPLPDEIGEEEV 258
+ Y T GV +IHW+ + + ++VAF++ E F E+P+PDE +
Sbjct: 256 LNYEHNDGSYTSGVHFNGAIHWVFTESRH--NQRVVVAFDIQTEEFREMPVPDEAEDCSH 313
Query: 259 NSNDSVEIDVAALGGCLCMTVNYETTKIDVWVMKQYGLKDSWCKLFTMMKSCVTSHLKSS 318
++ V V +L G LC+ + D+WVM +YG SW ++ + +S
Sbjct: 314 RFSNFV---VGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRI------RINLLYRSM 364
Query: 319 SPLCYSSDGSKVLIE 333
PLC + + +VL+E
Sbjct: 365 KPLCSTKNDEEVLLE 379
>At3g07870 unknown protein
Length = 417
Score = 110 bits (275), Expect = 1e-24
Identities = 105/418 (25%), Positives = 176/418 (41%), Gaps = 67/418 (16%)
Query: 4 DRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRSNI 63
+ LP D +A+IFSRLP+ S+ R +S +S++ H ++ + +L S I
Sbjct: 26 ESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Query: 64 ------YQIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVS----NGEIALRHPN 113
+ ++ + T F + ++GSCNGLL +S N + L +P
Sbjct: 86 RNGLHFLDLSEEEKRIKTK-KFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYLYNPF 144
Query: 114 AANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWL- 172
N + + P + + V GFGF +T +YK+L++ +
Sbjct: 145 TTNSLEL-------------------PECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFR 185
Query: 173 --VSLQNPFYDPHVRL-----------FSLKTN----SWKIIPTMPYALVFAQTMGVLVE 215
S N Y R+ S KT SW+ + PY V ++ LV
Sbjct: 186 GSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFV-KRSSEALVN 244
Query: 216 DSIHWIMAKKLDGLHPSLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCL 275
+H++ + + V+F+L E F E+P PD G N + L GCL
Sbjct: 245 GRLHFVTRPRRH-VPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHR------LVNLKGCL 297
Query: 276 CMTVNYETTKIDVWVMKQYGLKDSWCKLF---TMMKSCVTSHLKSSSPLCYSSDGSKV-- 330
C V K+D+WVMK YG+K+SW K + T + + +L + +++ KV
Sbjct: 298 CAVVYGNYGKLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVR 357
Query: 331 ---LIEGIEVLLEVHHKKLFWYDLKT---EQVSYEEIPDFNGAKICVGSLVPPSFPVD 382
L+E E+LLE + L YD K + + + +P++ + G+L P+D
Sbjct: 358 VLCLLENGEILLEYKSRVLVAYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPLD 415
>At3g23880 unknown protein
Length = 364
Score = 82.8 bits (203), Expect = 3e-16
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 47/342 (13%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLH-------RKNSLNRSFILR 58
LP + + EI RLPVKSL RF+ S +S+I F H + + +S
Sbjct: 14 LPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHALILETSKATTSTKSPYGV 73
Query: 59 LRSNIYQIED----DFSNLTTAVPLNHPFTRNSTNI-ALIGSCNGLLAVSNGEIALRHPN 113
+ ++ Y ++ N +T H + ++G+C+GL+ H +
Sbjct: 74 ITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCF--------HVD 125
Query: 114 AANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLV 173
+ +WNP I+ + L SD C + +GFG+D DYK++ L
Sbjct: 126 YDKSLYLWNPTIKLQQRLSSSDL-----ETSDDEC-VVTYGFGYDESEDDYKVVALLQ-- 177
Query: 174 SLQNPFYDPHVRLFSLKTNSWKIIPTMPYALVFAQTM--GVLVEDSIHWIMAKKLDGLHP 231
Q +++S + W+ + P +V A G+ + +++W
Sbjct: 178 --QRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGTLNWAATSSSSSW-- 233
Query: 232 SLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWVM 291
I++++++ + F E+P P G + + L GCL M + DVWVM
Sbjct: 234 -TIISYDMSRDEFKELPGPVCCGR------GCFTMTLGDLRGCLSMVCYCKGANADVWVM 286
Query: 292 KQYGLKDSWCKLFTMMKSCVTSHLKSSSPLCYSSDGSKVLIE 333
K++G SW KL ++ +T ++ PL + SDG VL+E
Sbjct: 287 KEFGEVYSWSKLLSI--PGLTDFVR---PL-WISDGLVVLLE 322
>At3g21410 hypothetical protein
Length = 374
Score = 79.7 bits (195), Expect = 3e-15
Identities = 100/393 (25%), Positives = 173/393 (43%), Gaps = 49/393 (12%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRSNIYQ 65
LP + EI R+P KSLLR + T K ++ + FI H +L R I+R + + +
Sbjct: 11 LPFELFEEILCRVPTKSLLRLKLTCKRWLALFNDKRFIYKHL--ALVREHIIR-TNQMVK 67
Query: 66 IEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLL--AVSNGEIALRHPNAANEITIWNP 123
I + ++ L + F ++ C+GLL G +A +WNP
Sbjct: 68 IINPVVGACSSFSLPNKFQVKGEIYTMV-PCDGLLLCIFETGSMA-----------VWNP 115
Query: 124 NIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGD-YKILRLSWLVSLQNPFYDP 182
+ + I L +PS CS +G G+D L+ D YKILR Y P
Sbjct: 116 CLNQVRWIFLL-------NPSFRGCS--CYGIGYDGLSRDSYKILRF----YANTGSYKP 162
Query: 183 HVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLTLE 242
V ++ LK+NSWK V + G+ ++ +++WI K + I +FN + E
Sbjct: 163 EVDIYELKSNSWKTFKVSLDWHVVLRCKGLSLKGNMYWI--AKWNRKPDIFIQSFNFSTE 220
Query: 243 IFNEV-PLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWVMKQY--GLKDS 299
F + LP V + + + D +L + + ET+KIDVWV + G+
Sbjct: 221 TFEPLCSLPVRYDVHNVVALSAFKGDNLSL-----LHQSKETSKIDVWVTNKVKNGVSIL 275
Query: 300 WCKLFTMMK---SCVTSHLKSSSPLCYSSDGSKVLIEGIEVLLEVHHKKLFWYDLKTEQV 356
W KLF++ + + + S P+ + +++++ EVL + + + Y + +++
Sbjct: 276 WTKLFSVTRPDLPVLLAFENLSYPVHFIDKNNRIVVCCEEVLADKRNVAVNIYVIGEDEI 335
Query: 357 -SYEEIPD----FNGAKICVGSLVPPSFPVDNS 384
S +EI F+ I + +P PV +S
Sbjct: 336 KSQDEIEQHQLGFSWPFISGYTYLPSLVPVPSS 368
>At3g17710 unknown protein
Length = 368
Score = 72.0 bits (175), Expect = 6e-13
Identities = 83/323 (25%), Positives = 129/323 (39%), Gaps = 49/323 (15%)
Query: 1 MASDRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLR 60
MAS +LP D EI SRLP +SL+RFR+ K + F+ H + + L
Sbjct: 1 MASVKLPWDLEEEILSRLPPRSLVRFRTVCKHWNGLFSDKRFVKKHLVRARPQFIFLTES 60
Query: 61 SNIYQIEDDFSNL--TTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEI 118
+Y IE D VP + N I +C+GLL + +
Sbjct: 61 KKMYSIEIDLGGTIEVREVPYDFHCQPMKKNFTTIMACDGLLFRDFWK---------QGV 111
Query: 119 TIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGD--YKIL-------RL 169
+WNP +R+ I + D C G G+D D YKIL RL
Sbjct: 112 AVWNPWLRQVGWIEY----------EDKGFRFC--GVGYDSCKPDKCYKILGYFNCTRRL 159
Query: 170 SWLVSLQNPFYDPHVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGL 229
S SLQ +Y ++ + ++K I T ++ + V +++W+ + L
Sbjct: 160 S--DSLQEGYY--QAAIYECASQAFKFIDTPNPFNLWPNKDPLSVNGNLYWLAHNHPETL 215
Query: 230 HPSLIVAFNLTLEIFNE---VPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKI 286
I F+ ++EIF +P + G E+ E + L C +ETTKI
Sbjct: 216 E-YFIETFDFSMEIFKPFCLLPCRKDFGSNELVLAVFKEDRFSLLKQC------FETTKI 268
Query: 287 DVWVMKQYGLKDS---WCKLFTM 306
++WV K ++ W K T+
Sbjct: 269 EIWVTKMKIDREEEVVWIKFMTL 291
>At2g27520 hypothetical protein
Length = 347
Score = 70.9 bits (172), Expect = 1e-12
Identities = 73/307 (23%), Positives = 128/307 (40%), Gaps = 49/307 (15%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRS-NIY 64
LP D + EI SRLP SL R R T K ++ FI + + +L L + +Y
Sbjct: 6 LPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQDLVLMLSNFGVY 65
Query: 65 QIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWNPN 124
+ + + N+ IA + CNGLL S E ++ + NP
Sbjct: 66 SMSTNLKEIP-----------NNIEIAQVFHCNGLLLCSTEE------GNKTKLVVVNPC 108
Query: 125 IRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLT---GDYKILRLSWLVSLQNPFYD 181
+ I PR+ + N + + G+G + YKILR+++ L
Sbjct: 109 TGQTRWIE-------PRTDYNYNHDIAL-GYGNNSTKKSYDSYKILRITYGCKL------ 154
Query: 182 PHVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLTL 241
V +F LK+NSW+++ + + GV + + +W+ K + I++F+ T
Sbjct: 155 --VEIFELKSNSWRVLSKVHPNVEKHYYGGVSFKGNTYWLSYTKFN------ILSFDFTT 206
Query: 242 EIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWVMKQYGLKD--S 299
E F VPLP + V ++ + V L + ++ ++ +W+ + + S
Sbjct: 207 ETFRSVPLPFLYQDGFV----TLALSVVREEQLLLLRSRFDMGQVGIWMCNKIDTETVLS 262
Query: 300 WCKLFTM 306
W K FT+
Sbjct: 263 WSKSFTL 269
>At3g10430 hypothetical protein
Length = 370
Score = 70.1 bits (170), Expect = 2e-12
Identities = 67/244 (27%), Positives = 106/244 (42%), Gaps = 21/244 (8%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSII-DSHNFINLHRKNSLNRSFILRLRSNIY 64
LP D + EI R P +SLLRF+ST K +I + F+ H S R + R +
Sbjct: 5 LPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRIENRERV- 63
Query: 65 QIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWNPN 124
QI D + + + + + C+GL+ E PN A +WNP
Sbjct: 64 QILDPVTEILAVSTIPNELRHKYFTLI---HCDGLMLGMCYEELGSDPNLA----VWNPV 116
Query: 125 IRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGD-YKILRLSWLVSLQNPFYDPH 183
+RK I P P+ SD GFG+D D YKILR ++L + P
Sbjct: 117 MRKIKWIKPSP-PLVCYWGSD------YLGFGYDKTFRDNYKILRFTYLGDDDDDESYPK 169
Query: 184 VRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLTLEI 243
+++ + SW+ I + + GV V S++WI ++ + I++F+ + E
Sbjct: 170 CQIYEFNSGSWRSIEAKFDGEIDVEVDGVSVNGSMYWIELQE----KKNFILSFDFSKET 225
Query: 244 FNEV 247
FN +
Sbjct: 226 FNRI 229
>At2g21930 unknown protein
Length = 396
Score = 69.3 bits (168), Expect = 4e-12
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 30/255 (11%)
Query: 3 SDRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNR--SFILRLR 60
S ++P D + EI RLPVK+L RF S SK SII + +F+ + NS R S I +
Sbjct: 22 SVQIPFDLIPEILKRLPVKTLARFLSVSKEYTSIIRNRDFMKSYLINSSTRPQSLIFTIA 81
Query: 61 SN----IYQIEDDFSNLTTAVP---LNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPN 113
+ + D + +++ P +N P + T S +GL+ +
Sbjct: 82 GGGIHCFFSLIDQGESTSSSKPTYLMNCPHLQLKT---FAPSVHGLICHGPPSTLI---V 135
Query: 114 AANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKIL-RLSWL 172
++ + + NP+ R+ I+P + D N H G+DP+ GDYK+L + +
Sbjct: 136 SSPRLIVSNPSTRRSIILPKI----------DANHECIYHHMGYDPIDGDYKVLCMMKGM 185
Query: 173 VSLQNPFYDPHVRLFSL-KTNSWKIIPTM-PYALVFAQTMGVLVEDSIHWIMAKKLDGLH 230
Q + +++F+L K NSW+++ P+ L T + + ++++ LD
Sbjct: 186 HVYQRRYLAKELQVFTLRKGNSWRMVEDFPPHCLCHEDTPDLCINGVLYYV--AMLDTAS 243
Query: 231 PSLIVAFNLTLEIFN 245
+++F++ E F+
Sbjct: 244 NHAVMSFDVRSEKFD 258
>At3g16210 hypothetical protein
Length = 360
Score = 68.6 bits (166), Expect = 6e-12
Identities = 73/312 (23%), Positives = 132/312 (41%), Gaps = 44/312 (14%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRSNIYQ 65
LP + EI RL +K L RFR K+ + +I+ F +R S + F+ N Y
Sbjct: 5 LPEELAIEILVRLSMKDLARFRCVCKTWRDLINDPGFTETYRDMSPAK-FVSFYDKNFYM 63
Query: 66 IEDDFSNLTTAVPLNHPFTRNSTNIAL-IGSCNGLLAVSNGEIALRHPNAANEITIWNPN 124
++ + + L+ P ++ + + + C+G L V+ L++ + + +WNP
Sbjct: 64 LDVEGKHPVITNKLDFPLDQSMIDESTCVLHCDGTLCVT-----LKN----HTLMVWNPF 114
Query: 125 IRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLVSLQNPFYDPHV 184
++ I+P P D N + GFG+DP+ DYK++ + +
Sbjct: 115 SKQFKIVP------NPGIYQDSN----ILGFGYDPVHDDYKVVTFIDRLDVST------A 158
Query: 185 RLFSLKTNSWKIIPTMPYA-LVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLTLEI 243
+F +T SW + Y + G ++ ++WI + I+ FNL+
Sbjct: 159 HVFEFRTGSWGESLRISYPDWHYRDRRGTFLDQYLYWIAYR---SSADRFILCFNLSTHE 215
Query: 244 FNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTK--IDVWVMKQYGLKDSWC 301
+ ++PLP V + + LC+T YE K I + VM++ G SW
Sbjct: 216 YRKLPLP-------VYNQGVTSSWLGVTSQKLCIT-EYEMCKKEIRISVMEKTG---SWS 264
Query: 302 KLFTMMKSCVTS 313
K+ ++ S S
Sbjct: 265 KIISLSMSSFIS 276
>At3g23260 unknown protein
Length = 362
Score = 67.8 bits (164), Expect = 1e-11
Identities = 71/308 (23%), Positives = 123/308 (39%), Gaps = 31/308 (10%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLR-SNIY 64
LP + EI SR+P K L R RSTSK ++ + +F H N+ I+ L+ S +Y
Sbjct: 6 LPVELQEEILSRVPAKYLARLRSTSKQWNALSKTGSFAKKHSANATKEPLIIMLKDSRVY 65
Query: 65 ----QIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITI 120
+ +N+ + L +I+ + C+GLL + + + N + +
Sbjct: 66 LASVNLHGVHNNVAQSFELGSRLYLKDPHISNVFHCDGLLLLCSIK--------ENTLEV 117
Query: 121 WNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLVSLQNPFY 180
WNP + + I PR G+ YK+LR+ V +Q F
Sbjct: 118 WNPCSGEAKL-------IKPRHSYYKESDFYALGYDNKSSCKKYKVLRVISQVHVQGDFK 170
Query: 181 DPHVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLT 240
+ ++ +SW++ L Q V V+ S +W++ + ++F+ +
Sbjct: 171 IEY-EIYDFTNDSWRVHGATT-ELSIRQKHPVSVKGSTYWVVRNRY--FPYKYFLSFDFS 226
Query: 241 LEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTK--IDVWVMKQYGLKD 298
E F + LP + + E + CL N+ TT ++VWV G
Sbjct: 227 TERFQSLSLPQPFPYLVTDLSVVREEQL-----CLFGYYNWSTTSEDLNVWVTTSLGSVV 281
Query: 299 SWCKLFTM 306
SW K T+
Sbjct: 282 SWSKFLTI 289
>At3g17490 hypothetical protein
Length = 388
Score = 67.0 bits (162), Expect = 2e-11
Identities = 83/353 (23%), Positives = 135/353 (37%), Gaps = 54/353 (15%)
Query: 1 MASDRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLR 60
M L D + EI SR+P SL R R T K ++ + F HR + L L+
Sbjct: 1 MMMPHLSEDLVEEILSRVPAISLKRLRYTCKQWNALFNDQRFSKKHRDKAPKTYLGLTLK 60
Query: 61 S-NIYQIEDDFSNL--TTAVPLNHPF--------TRNSTNIALIGSCNGLLAVSNGEIAL 109
IY + + L + L F N I+ I C+GL+ S
Sbjct: 61 DFRIYSMSSNLHGLLHNNNIDLLMEFKGKLSSLNDLNDFEISQIYPCDGLILCST----- 115
Query: 110 RHPNAANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLC-VHGFGFD----PLTGDY 164
+ +WNP + I N +C FG+D +Y
Sbjct: 116 ---KRNTRLVVWNPCTGQTRWI------------KRRNRRMCDTFAFGYDNSKSSCLNNY 160
Query: 165 KILRLSWLVSLQNPFYDPHVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAK 224
KILR+ + Q Y+ +F +NSW+++ P ++ + V V+ + +W
Sbjct: 161 KILRVCEKIKGQQFEYE----IFEFSSNSWRVLDVNPNCII--EGRSVSVKGNSYWFAT- 213
Query: 225 KLDGLHPSLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETT 284
+ H I F+ + E F ++PLP I + NDS + + +++T
Sbjct: 214 -ITKTH-YFIRRFDFSSETFQKLPLPFHI----FDYNDSRALSAFREEQLSVLHQSFDTE 267
Query: 285 KIDVWVMKQYGLKD--SWCKLFTMM---KSCVTSHLKSSSPLCYSSDGSKVLI 332
K+D+WV + SW K FT+ + + SPL + D K +I
Sbjct: 268 KMDIWVTNKIDETTDWSWSKFFTVRLINRLDYPISMMMKSPLSFFIDEKKNII 320
>At1g47730 hypothetical protein
Length = 391
Score = 67.0 bits (162), Expect = 2e-11
Identities = 75/315 (23%), Positives = 133/315 (41%), Gaps = 44/315 (13%)
Query: 2 ASDRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLH--RKNSL------NR 53
+S LP D +EIFSRLP KS++RFR SK SI + F N R N + ++
Sbjct: 21 SSSSLPLDLTSEIFSRLPAKSVVRFRCVSKLWSSITTAPYFTNSFETRPNLMFFFKEGDK 80
Query: 54 SFILRLRSNIYQIEDDFSNLTTAV--PLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRH 111
F+ + + + +S ++ + + + + L S +GL+
Sbjct: 81 FFVFTIPQHNQNPNESYSYSSSEIIDSYHTTYPKRCCVTTLTESVHGLICFR-------- 132
Query: 112 PNAANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSW 171
AA I IWNP +RK F PL ++ SL G+DP+ G +K++ + +
Sbjct: 133 -KAATPI-IWNPTMRK-----FKPLRKLDERWKNIKVSL-----GYDPVDGKHKVVCMPY 180
Query: 172 LVSLQNPFYDPHVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDS--IHWIMAKKLDGL 229
N FY+ V W+ + T F GV S I+ ++ + D
Sbjct: 181 ----GNAFYECRVLTLG-SDQEWRTVKTNHKNSPFTFHGGVCYRQSRCINGVIYYRADTN 235
Query: 230 HPSLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVW 289
+I++F++ E F+ + LP + N + + ++ G C+ N+E +W
Sbjct: 236 SGRVILSFDVRSERFDVIELP-------WDENFGLVMMMSYKGRLACLGFNHEKNSRSMW 288
Query: 290 VMKQYGLKDSWCKLF 304
V++ ++ C +
Sbjct: 289 VLENVEQREWSCHTY 303
>At3g22650 hypothetical protein
Length = 372
Score = 66.6 bits (161), Expect = 2e-11
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 44/306 (14%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRSNIYQ 65
LP D + EI R+PV+ L +F+ T K +++ FI + + +R+ I Q
Sbjct: 9 LPIDIIEEICCRIPVEYLTQFKLTCKQWFALLKDKRFIYKYLDLFQEQERFIRI-DRIVQ 67
Query: 66 IEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWNPNI 125
I D ++ P+ F N I+ + C+GLL + + ++ +WNP +
Sbjct: 68 IIDPVKGARSSSPIPQEFD-NVAQISTMVHCDGLLLCR----CKNERSRSYKLAVWNPFL 122
Query: 126 RKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGD-YKILRL-SWLVSLQNPF---Y 180
+ I P D S +GFG+D + D YK+LR+ + ++ Y
Sbjct: 123 SRVKWI----------EPMDFYSSNDFYGFGYDNVCRDEYKLLRIFDGEIEDESEIAGSY 172
Query: 181 DPHVRLFSLKTNSWKIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLT 240
+P ++++ K++SW+I+ V V+ +++WI + I +F+ +
Sbjct: 173 EPKIQIYDFKSDSWRIV----------DDTRVSVKGNMYWI--AHWNNRPEIFIQSFDFS 220
Query: 241 LEIFNEV-PLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWVMKQYGLKD- 298
E F V LP E + + S+ D +L + + ET KI+VW+ + L D
Sbjct: 221 TETFKIVCNLPFECNVLDTAALSSLRGDRLSL-----LHQSGETMKIEVWITNK--LSDE 273
Query: 299 --SWCK 302
SW K
Sbjct: 274 VVSWTK 279
>At1g33530 hypothetical protein
Length = 441
Score = 66.2 bits (160), Expect = 3e-11
Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 47/305 (15%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLH-----RKNSLNRSFILRLR 60
LP + EI RLPVK L+R +S SK KS+I+S + H +K L I R
Sbjct: 97 LPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVER 156
Query: 61 SNIYQIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITI 120
S I F + + +N + + + + GSCNGL+ V + + I
Sbjct: 157 STSKSICIKFFSRRSG--MNAINSDSDDLLRVPGSCNGLVCVYE----------LDSVYI 204
Query: 121 WNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLVSLQNPFY 180
+ N P + T P S+ GFG D +TG YK++ L F
Sbjct: 205 YLLN-------PMTGVTRTLTPPRGTKLSV---GFGIDVVTGTYKVMVL-------YGFD 247
Query: 181 DPHVRLFSLKTNSW----KIIPTMPYALV-FAQTMGVLVEDSIHWIMAKKLDGLHPSLIV 235
+F L TN W K MP + + + V V S+ W++A S I+
Sbjct: 248 RVGTVVFDLDTNKWRQRYKTAGPMPLSCIPTPERNPVFVNGSLFWLLASDF-----SEIL 302
Query: 236 AFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWVMKQYG 295
+L E F + P+++ + +V+S I + +L LC++ + VWV+ Q
Sbjct: 303 VMDLHTEKFRTLSQPNDMDDVDVSSG---YIYMWSLEDRLCVSNVRQGLHSYVWVLVQDE 359
Query: 296 LKDSW 300
L + W
Sbjct: 360 LSEKW 364
>At3g08750 hypothetical protein
Length = 369
Score = 64.3 bits (155), Expect = 1e-10
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 29/245 (11%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRSNIYQ 65
LP + + EI ++P +SL+RF+ST K ++I F+ H + FI R+ Q
Sbjct: 12 LPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDHYSPERFI---RTYDQQ 68
Query: 66 IEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPNAANEITIWNPNI 125
I D + + + + F R+ I + C+GL+ + + N + +WNP +
Sbjct: 69 IIDPVTEILSDALIPDEF-RDLYPIYSMVHCDGLMLCTCRK-------WDNSLAVWNPVL 120
Query: 126 RKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTG--DYKILRLSWLVSLQNPFYDPH 183
R+ I PS G G+D +YKIL+L + ++ DP+
Sbjct: 121 REIKWI----------KPSVCYLHTDYVGIGYDDNVSRDNYKILKLLGRLP-KDDDSDPN 169
Query: 184 VRLFSLKTNSWK-IIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHPSLIVAFNLTLE 242
++ K++SWK ++ + + GV V+ ++WI KK D I+ F+ + E
Sbjct: 170 CEIYEFKSDSWKTLVAKFDWDIDIRCNNGVSVKGKMYWIAKKKED----FTIIRFDFSTE 225
Query: 243 IFNEV 247
F E+
Sbjct: 226 TFKEI 230
>At2g40920 unknown protein
Length = 436
Score = 63.5 bits (153), Expect = 2e-10
Identities = 83/375 (22%), Positives = 154/375 (40%), Gaps = 47/375 (12%)
Query: 9 DTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLRSNIYQIED 68
D + EI R P+ SL RF+ SK S+I S F N L + + R + +Y
Sbjct: 57 DHVMEILMRFPLTSLTRFKCVSKQWSSLISSRYFCN------LLYTTVTRQQPRLYMCLK 110
Query: 69 DFSNLTTAVPLNHPFTRNST------NIALIGSCNGLLAVSNGEIALRHPNAANEITIWN 122
D + ++ P N++ ++++ G L V G + A I+N
Sbjct: 111 DDGGHRVLLSISSPSRGNTSFVVVEQDLSIPGMGGFFLNVVRGLMCFSRRKKAR---IYN 167
Query: 123 PNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLVSLQNPFYDP 182
P+ ++ +P + I + + + G DP++ YK++ + SL
Sbjct: 168 PSTKQLLTLPAIKSDIVAQQGQTKHHPR--YYIGHDPVSDQYKLVCTVAISSLL------ 219
Query: 183 HVRLFSLKTNSW-----------KIIPTMPYALVFAQTMGVLVEDSIHWIMAKKLDGLHP 231
RL +LK+ W K++P Y T G S+ MA +
Sbjct: 220 -PRLGNLKSEHWVFALEAGGSWKKVVPLENYRHHAPSTEGRSTSGSVVRYMA--WPDNYN 276
Query: 232 SLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCM---TVNYETTKIDV 288
++V+F++ E +P+P EI +EV ++ D+ GG + + T + D+
Sbjct: 277 CVVVSFDIRSEQLTIIPVPREIHLDEVVPAVTMMADLIEYGGKIAIFYHTNLKDEGSADL 336
Query: 289 WVMKQYGLKDSWCKLFTMMKSCVTSHLKSSSPLCY--SSDGSKVLIEGIEVLLEVHHKKL 346
WV++ G K W K +++ C HL L ++ KV++ +E+ + +
Sbjct: 337 WVLEDTG-KSEWSKKTLVLQPC-QRHLVEDIELIVKGTTQDGKVILAPVEMHSRFY---I 391
Query: 347 FWYDLKTEQVSYEEI 361
+Y+L++ + EI
Sbjct: 392 LYYNLQSNDLRKVEI 406
>At1g11620 hypothetical protein
Length = 363
Score = 63.2 bits (152), Expect = 3e-10
Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 49/323 (15%)
Query: 1 MASDRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSLNRSFILRLR 60
MA+ L D + EI SR+P +SL+R RST K +++I F+N H + R +
Sbjct: 1 MATMDLSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHLSHMRYREQQFTVF 60
Query: 61 SNIYQIEDDFSNLTTAVPLNH----------PFTRNSTNIALIGSCNGLLAVSNGEIALR 110
+N + + F + T+ V ++ PF + I C+GLL + L
Sbjct: 61 NNEHIVSPLFGSTTSYVGIDFNKPENCGVKLPFPIALSPAINISHCDGLLLYVTKSMLL- 119
Query: 111 HPNAANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFG--FDPLTG--DYKI 166
+ NP + + I + + S+ +G G F+ +G DYK+
Sbjct: 120 ---------VANPLLSQKRWI---------KCSEGFDHSMDAYGLGYLFNQSSGFYDYKV 161
Query: 167 LRLSWLVSLQNPFYDPHVRLFSLKTNSWKIIPTMPYALVFAQTM-GVLVEDSIHWIMAKK 225
+R + ++N V +++ K++SWK++ + + V + + +W+ K
Sbjct: 162 VR--FRCGIKN---SSRVEVYAFKSDSWKVVVDTNFGGFDGLPLSSVCLRGTPYWLGYNK 216
Query: 226 LDGLHPSLIVAFNLTLEIFNEVPLPDE-IGEEEVNSNDSVEIDVAALGGCLCMTVN-YET 283
G I +F+ + E F + LP + IG + S+ I G L + + +ET
Sbjct: 217 -SGNELMSIQSFDFSKERFEPLFLPPQSIGSRNLVKYISLGI---FRGDQLSLLLECHET 272
Query: 284 TKIDVWVMKQYGLKDSWCKLFTM 306
K+ +WVMK K W +L T+
Sbjct: 273 CKLHLWVMK----KQHWSRLMTV 291
>At3g52320 putative protein
Length = 390
Score = 62.8 bits (151), Expect = 3e-10
Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 51/369 (13%)
Query: 6 LPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSL------------NR 53
+P + L +I RLP KSL+RF+ SK S+I S F N K S N+
Sbjct: 27 IPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRENQ 86
Query: 54 SFILRLRSNIYQIEDDFSNLTTAVPLNHPFTRNSTNIALIGSCNGLLAVSNGEIALRHPN 113
S L L+S+ D S+ + +V H T L+ + GLL G
Sbjct: 87 SKYLLLQSS-SSSRHDHSDTSVSVIDQHS-TIPIMGGYLVNAARGLLCYRTG-------- 136
Query: 114 AANEITIWNPNIRKHHIIPFLPLPITPRSPSDMNCSLCVHGFGFDPLTGDYKILRLSWLV 173
+ + NP+ R+ + LPI + N FG DP +YK+L L W V
Sbjct: 137 --RRVKVCNPSTRQ-----IVELPIMRSKTNVWN------WFGHDPFHDEYKVLSLFWEV 183
Query: 174 SLQNPFYDPHVRLFSLKTN-SWKIIPT--MPYALVFAQTMGVLVEDSIHWIMAKKLDGLH 230
+ + ++ L SW+ + P+ + G+ ++ +++ + + D +
Sbjct: 184 TKEQTVVRSEHQVLVLGVGASWRNTKSHHTPHRPFHPYSRGMTIDGVLYY--SARTDA-N 240
Query: 231 PSLIVAFNLTLEIFNEVPLPDEIGEEEVNSNDSVEIDVAALGGCLCMTVNYETTKIDVWV 290
++++F+L+ E FN + LP E ++ N ++ C M + + +DV V
Sbjct: 241 RCVLMSFDLSSEEFNLIELPFENWSRTIHMNYQGKV-----ATCQYMRLASDGF-VDVCV 294
Query: 291 MKQYGLKDSWCKLFTMMKSCVTSHLKSSSPLCY--SSDGSKVLIEGIEVLLEVHHKKLFW 348
++ K W T + + L S D KVL+ LL H + F
Sbjct: 295 LEDAD-KSQWSNKKTFVLPISQMNFVHGDRLVVGASRDSGKVLMRKAN-LLRNQHARFFL 352
Query: 349 YDLKTEQVS 357
YD++ +++
Sbjct: 353 YDMERNEIA 361
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,883,947
Number of Sequences: 26719
Number of extensions: 438662
Number of successful extensions: 1511
Number of sequences better than 10.0: 246
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 302
length of query: 412
length of database: 11,318,596
effective HSP length: 102
effective length of query: 310
effective length of database: 8,593,258
effective search space: 2663909980
effective search space used: 2663909980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Medicago: description of AC149495.3