BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149471.17 - phase: 0 /pseudo
(1391 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g70010 hypothetical protein 1053 0.0
At2g16000 putative retroelement pol polyprotein 1051 0.0
At2g20460 putative retroelement pol polyprotein 1034 0.0
At4g17450 retrotransposon like protein 959 0.0
At2g13940 putative retroelement pol polyprotein 949 0.0
At1g26990 polyprotein, putative 940 0.0
At4g14460 retrovirus-related like polyprotein 918 0.0
At1g57640 860 0.0
At4g07810 putative polyprotein 731 0.0
At1g44510 polyprotein, putative 714 0.0
At2g07010 putative retroelement pol polyprotein 675 0.0
At1g36620 hypothetical protein 657 0.0
At1g31210 putative reverse transcriptase 654 0.0
At2g06840 putative retroelement pol polyprotein 622 e-178
At4g27210 putative protein 610 e-174
At3g60170 putative protein 588 e-168
At4g10990 putative retrotransposon polyprotein 578 e-165
At3g25450 hypothetical protein 573 e-163
At3g61330 copia-type polyprotein 568 e-161
At4g23160 putative protein 548 e-156
>At1g70010 hypothetical protein
Length = 1315
Score = 1053 bits (2723), Expect = 0.0
Identities = 576/1406 (40%), Positives = 838/1406 (58%), Gaps = 117/1406 (8%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
S+ KNKLGF++G IP PD DD W RCN +V+SWL+NSVS I +I+++ TA +
Sbjct: 4 SIEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAI 63
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL RF K R+ LR I++L+QG+ + Y T + LWEEL S + +P
Sbjct: 64 WKDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSYHTRTQTLWEELTSLQAVPR----- 118
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
+ I R ++++ FL GLND + VR+Q+L+ LPSL++V++++ Q+E+
Sbjct: 119 -----TVEDLLIERETNRVIDFLMGLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDETQR 173
Query: 184 ASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYP 243
++ S + SS+ S+ + Q K +C++ +R H D CY KHGYP
Sbjct: 174 SARISTTPGMTSSV-FPVSNQSSQSALNGDTYQKKERPVCSYCSRPGHVEDTCYKKHGYP 232
Query: 244 NVNKAQ-----PRVNA---VTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQA 295
K++ P ++A + E+V TS S G + Q+ QL S L +
Sbjct: 233 TSFKSKQKFVKPSISANAAIGSEEVVNNTSVSTGD---------LTTSQIQQLVSFL--S 281
Query: 296 NLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSF 355
+ + P S+ Q + IS +S+ SSS+ + P
Sbjct: 282 SKLQPPSTPVQPEVHSIS--------VSSDPSSSSTVCP--------------------- 312
Query: 356 FSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLS 415
+G+V + L+ VL+ P F NL+SV+ L +S+
Sbjct: 313 -----------------------ISGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMG 349
Query: 416 YSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISC 475
+ F C++QD M+G+ KQ+ LY S S SS++
Sbjct: 350 CRIWFDETSCVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSIT------------ 397
Query: 476 NSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV-CDLCHFAKHKHLPFNSS 534
+S+ S+ LWH RLGH S Q+L MS L NN D C +CH +K KHLPF S
Sbjct: 398 --VASVTSHDLWHKRLGHPSVQKLQPMSSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSH 455
Query: 535 ISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFI 594
+ +S F+L+H+D WGP S+ + G+RYFLTIVDD+SR WV LL++K++V T + F+
Sbjct: 456 NNKSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFV 515
Query: 595 TMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVG 654
TM++ QF T K +R+DN PE + FY S GI+ SC ETPQQN VERKHQHILNV
Sbjct: 516 TMVENQFETTIKGVRSDNAPELNFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVA 575
Query: 655 RALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCY 714
R+L FQS +P S+W IL AV+LINR+P PIL ++ P+ VL +P + KVFGCLCY
Sbjct: 576 RSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCY 635
Query: 715 ASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSL 774
AST R K PRA+ F+GY SGFKG+ L D+++ I VSRHV FHE P+ + L
Sbjct: 636 ASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDL 695
Query: 775 STTPNWEYFSSSNFS-----DVSNQPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPAS 829
S +F N + S+ P +S + ++ ILP + P N P P +
Sbjct: 696 SQEEQ-NFFPDLNPTPPMQRQSSDHVNPSDSSSSVE-ILPSANPTNNVPEPSV------- 746
Query: 830 RTSTRQTTTPSYLQDYVCNNIHTS-PYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAE 888
+TS R+ P+YLQDY C+++ +S P+ I ++S+ +++ Y +F+ L T EP +Y E
Sbjct: 747 QTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSNYTE 806
Query: 889 ASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLV 948
A K W+ AM E LE T TW++ LP++ + IGCRWI+K+KY++DGS+ER+KARLV
Sbjct: 807 AEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLV 866
Query: 949 AKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYML 1008
A+GY Q EG+DY +T+SPVAKL +++L++ +++ L QLD++NAFL+GDL E++YM
Sbjct: 867 AQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMR 926
Query: 1009 IPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVK 1063
+P G S + PN VC+L+KSLYGLKQASR+WY K +S L +IQ+ DH+ F+K
Sbjct: 927 LPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLK 986
Query: 1064 KTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGI 1123
+ F +LVY+DDIIIA ++ +KS + + FK++DLG+LKYFLG+E+ S GI
Sbjct: 987 ISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGI 1046
Query: 1124 SLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTT 1183
+ QRKY LDLL ++G + KP S P D S+ DS + ++ YRRL+GRL+YLN T
Sbjct: 1047 HISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNIT 1106
Query: 1184 RPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWA 1243
RPDITF +L+QF P +AH A ++L+Y+KG G+GLF+ S + L+ +++AD+
Sbjct: 1107 RPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYN 1166
Query: 1244 GCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDI 1303
C D+RRS SG C FLG+SLI W+++KQ VS+SS+EAEYR+L+ AT EL W+ L+++
Sbjct: 1167 SCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKEL 1226
Query: 1304 HISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQV 1363
+ K +L+CDN++A+HIA N VFHERTKH+E DCH VRE++ G+ +L ++++ Q+
Sbjct: 1227 QVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQI 1286
Query: 1364 ADFFTKALLPKPFNILLSKMGLINIY 1389
AD FTK L P F+ L+SKMGL+NI+
Sbjct: 1287 ADPFTKPLYPSHFHRLISKMGLLNIF 1312
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 1051 bits (2719), Expect = 0.0
Identities = 581/1416 (41%), Positives = 838/1416 (59%), Gaps = 89/1416 (6%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNK GFI+G + P DLN W RCN +V+SWL+NSVS I ++I+ + A ++
Sbjct: 94 SLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVSPQIYRSILRMNDASDI 153
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL RF+ + R NL I + +QG+ S+ +Y+T +K LW++L S +
Sbjct: 154 WRDLNSRFNVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTLWDQLDSTEALDE----- 208
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
PC C + + + +I++FL GLN+ ++IVR Q++ LPSL +VY ++ Q+ S
Sbjct: 209 PCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPSLGEVYHILDQDNSQQ 268
Query: 184 ASLSSLSVSDDSSIQINASDVRK---------FQGRGKNPSQPKPTRLCTFSNRTNHTVD 234
S S++ V+ ++ Q+ S++ + + G N +P +C+F NR H +
Sbjct: 269 -SFSNV-VAPPAAFQV--SEITQSPSMDPTVCYVQNGPNKGRP----ICSFYNRVGHIAE 320
Query: 235 FCYLKHGYPN--VNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAG-FSQEQLVQLASL 291
CY KHG+P K + + + A + S +S S G S+EQL Q ++
Sbjct: 321 RCYKKHGFPPGFTPKGKAGEKLQKPKPLAANVAESSEVNTSLESMVGNLSKEQLQQFIAM 380
Query: 292 LQQANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSY------WLLDSGA 345
P S+ + AS+ S + + S S GI+ + W++DSGA
Sbjct: 381 FSSQLQNTPPSTYATAST---SQSDNLGICFSPSTYSFIGILTVARHTLSSATWVIDSGA 437
Query: 346 NEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLI 405
H+S + S FSS V+LP V + GT+ + L +VL+ P F NLI
Sbjct: 438 THHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIPEFRLNLI 497
Query: 406 SVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHK 465
S++ L + + + F C IQD + +M+G +++ LY V +
Sbjct: 498 SISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLY------------LLDVGDQ 545
Query: 466 SCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMS-LLYPNIISSNNKDVCDLCHFA 524
S +V A + + +WH RLGH S QRL ++S L + D C +CH A
Sbjct: 546 SISVNAVVDIS---------MWHRRLGHASLQRLDAISDSLGTTRHKNKGSDFCHVCHLA 596
Query: 525 KHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKA 584
K + L F +S F+LLH+D+WGP S+ +V G++YFLTIVDDHSR W+ LLK+K+
Sbjct: 597 KQRKLSFPTSNKVCKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKS 656
Query: 585 EVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQQNGRVE 644
EV T FI ++ Q+ + K +R+DN PE ++FYA GI+ SC ETP+QN VE
Sbjct: 657 EVLTVFPAFIQQVENQYKVKVKAVRSDNAPELKFTSFYAEKGIVSFHSCPETPEQNSVVE 716
Query: 645 RKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALN 704
RKHQHILNV RAL+FQS++P S W +L AVFLINR P+ +L N++PY +L P
Sbjct: 717 RKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYE 776
Query: 705 LFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHE 764
+ FGCLCY+ST R K QPR+R +FLGY SG+KG+ L D++S +F+SR+V FHE
Sbjct: 777 QLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHE 836
Query: 765 TFLPYP-----HTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPPP 819
P +SL SS SD ++ P+ + P+ I D+ P
Sbjct: 837 EVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSL--PSQISDL-----------P 883
Query: 820 PPIPVVSPASRTSTRQTTTPSYLQDYVCNNIHTS-PYPINNYISHHNLSNNYSSFVMSLH 878
P I +S R P++L DY CN + + YPI++ IS+ +S ++ ++ ++
Sbjct: 884 PQI--------SSQRVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNIT 935
Query: 879 TTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADG 938
P +YAEA W +A+ E+ A+EKT TW++ LP K +GC+W++ +K+ ADG
Sbjct: 936 KIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADG 995
Query: 939 SIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLH 998
++ER+KARLVAKGY Q EGLDY DT+SPVAK+TTI+L++ +S+ W L QLDV+NAFL+
Sbjct: 996 NLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLN 1055
Query: 999 GDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQ 1053
G+L+E+++M IP G K N V +L++S+YGLKQASR+W++K +S L + +
Sbjct: 1056 GELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKK 1115
Query: 1054 ASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLG 1113
DH+LF+K F I+LVYVDDI+IA S + LD FK++DLG LKYFLG
Sbjct: 1116 THGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLG 1175
Query: 1114 IEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRL 1173
+EVA + GIS+CQRKY L+LL +G + KPVS P ++K+ +D DI YRR+
Sbjct: 1176 LEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRI 1235
Query: 1174 VGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSIN 1233
VG+L+YL TRPDITF +L QF S P H TAA RVL+Y+KG G+GLF+ +S +
Sbjct: 1236 VGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLT 1295
Query: 1234 LQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCEL 1293
L+GF+D+DWA C D+RRS + F+G+SLISWR+KKQ TVSRSS+EAEYRALA ATCE+
Sbjct: 1296 LKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEM 1355
Query: 1294 QWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILK 1353
W+ LL + S P +P+LY D+ +A++IA NPVFHERTKH+++DCH VRE++ G LK
Sbjct: 1356 VWLFTLLVSLQAS-PPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELK 1414
Query: 1354 LLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIY 1389
LL V ++DQVAD TK L P F L SKM ++NI+
Sbjct: 1415 LLHVRTEDQVADILTKPLFPYQFEHLKSKMSILNIF 1450
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 1034 bits (2674), Expect = 0.0
Identities = 580/1418 (40%), Positives = 833/1418 (57%), Gaps = 90/1418 (6%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNKLGF++G +P P D N W RCN +V+SWL+NSVS I ++I+ + A ++
Sbjct: 98 SLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDI 157
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL +RF+ + R NL I +L+QG+ S+ +Y+T +K LW++L S + +
Sbjct: 158 WRDLFDRFNLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTLWDQLDSTEALDD----- 212
Query: 124 PCRCEASKVAKIHRNEDQ--IMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEES 181
PC C K ++++ ++ IM+FL GLN+ ++IVR Q++ LPSL +VY ++ Q+ S
Sbjct: 213 PCTC--GKAVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPSLAEVYHILDQDNS 270
Query: 182 NN------ASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDF 235
A ++ VS+ S I + ++ Q P++ +PT C+F NR H +
Sbjct: 271 QKGFFNVVAPPAAFQVSEVSHSPITSPEIMYVQS---GPNKGRPT--CSFCNRVGHIAER 325
Query: 236 CYLKHGYP-------NVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQL 288
CY KHG+P + P+ AV + V GQ + + N FS +Q+ L
Sbjct: 326 CYKKHGFPPGFTPKGKSSDKPPKPQAVAAQ-VTLSPDKMTGQLETLAGN--FSPDQIQNL 382
Query: 289 ASLLQ---QANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIP------KPSYW 339
+L Q +V P ++SSQ ++ + S GI+ W
Sbjct: 383 IALFSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGILAVSHNSLSSDTW 442
Query: 340 LLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPA 399
++DSGA H+S + F + +V+LP V + GTV + L +VL+ P
Sbjct: 443 VIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQNVLFIPE 502
Query: 400 FTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVF 459
F NLIS++ L L + F + C IQD +G K++ LY S +
Sbjct: 503 FRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDTQSPAI---- 558
Query: 460 SSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDV-C 518
S N V +S +WH RLGH S RL S+S + N K C
Sbjct: 559 ------SVNAVVDVS-----------VWHKRLGHPSFSRLDSLSEVLGTTRHKNKKSAYC 601
Query: 519 DLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVI 578
+CH AK K L F S+ + ++ FELLH+D+WGP S+ +V G++YFLTIVDDHSR W+
Sbjct: 602 HVCHLAKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIY 661
Query: 579 LLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQ 638
LLKSK++V T FI +++ Q+ K +R+DN E + FY + GI+ SC ETP+
Sbjct: 662 LLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTEFYKAKGIVSFHSCPETPE 721
Query: 639 QNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHH 698
QN VERKHQHILNV RAL+FQS + +W +L AVFLINR P+ +L N++P+ VL
Sbjct: 722 QNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTG 781
Query: 699 QLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSR 758
+LP + K FGCLCY+ST R K PR+R +FLGY GFKG+ L D++S + +SR
Sbjct: 782 KLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISR 841
Query: 759 HVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPPINPPP 818
+V FHE P + S T SDV P++S I LP
Sbjct: 842 NVEFHEELFPLASSQQSAT---------TASDVFTPMDPLSSGNSITSHLPS-------- 884
Query: 819 PPPIPVVSPASRTSTRQTTT-PSYLQDYVCNNIHTSP-YPINNYISHHNLSNNYSSFVMS 876
P +SP+++ S R+ T P++LQDY C ++ +PI++ +S+ +S ++ ++ +
Sbjct: 885 ----PQISPSTQISKRRITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINN 940
Query: 877 LHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHA 936
+ P+SY EA W A+ E+ A+E+T TW++ LP K +GC+W++ VK+HA
Sbjct: 941 ISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHA 1000
Query: 937 DGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAF 996
DGS+ER KAR+VAKGY Q EGLDY +T+SPVAK+ T++L++ +S+ W+L+QLD++NAF
Sbjct: 1001 DGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAF 1060
Query: 997 LHGDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHY 1051
L+GDL+E +YM +P G K PN VC+L+KS+YGLKQASR+W+ K ++ L +
Sbjct: 1061 LNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGF 1120
Query: 1052 IQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYF 1111
+ DH+LFV+ S F +LLVYVDDI+IA + + L ASFK+++LG LKYF
Sbjct: 1121 EKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYF 1180
Query: 1112 LGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYR 1171
LG+EVA + GISL QRKY L+LL + +D KP S P +I+L ++ D YR
Sbjct: 1181 LGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYR 1240
Query: 1172 RLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSS 1231
RLVG+L+YL TRPDITF +L QF S P AH A +VL+Y+KG G+GLF+
Sbjct: 1241 RLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDD 1300
Query: 1232 INLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATC 1291
+ L+G++DADW C D+RRS +G F+G+SLISWR+KKQ TVSRSS+EAEYRALA A+C
Sbjct: 1301 LTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASC 1360
Query: 1292 ELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGI 1351
E+ W+ LL + + +P+LY D+ +A++IA NPVFHERTKH+EIDCH VREK+ G
Sbjct: 1361 EMAWLSTLLLALRVH-SGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQ 1419
Query: 1352 LKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIY 1389
LKLL V ++DQVAD TK L P F LLSKM + NI+
Sbjct: 1420 LKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNIF 1457
>At4g17450 retrotransposon like protein
Length = 1433
Score = 959 bits (2480), Expect = 0.0
Identities = 547/1431 (38%), Positives = 795/1431 (55%), Gaps = 137/1431 (9%)
Query: 1 VQRSLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTA 60
++ SL KNKL F++G +P PD D W RCN +V++WL+N V+
Sbjct: 97 MRMSLDAKNKLSFVDGSLPRPDVSDRMFKIWSRCNSMVKTWLLNVVT------------- 143
Query: 61 FEVWHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCS 120
E+W+DL RF + R L +I+ LKQG+ + Y+T+ K LWE+LA+ R +
Sbjct: 144 -EMWNDLFSRFRVSNLPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLWEQLANTRVLT--- 199
Query: 121 CIHPCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEE 180
+ C CE K +I+QFL GLND F+ +R Q+L + P P L ++Y+++ Q+E
Sbjct: 200 -VRKCNCEHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNMKPRPGLTEIYNMLDQDE 258
Query: 181 SNNASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKH 240
S + + ++ Q+ AS + Q S KP C++ N+ H VD CY KH
Sbjct: 259 SQRLVGNPTLSNPTAAFQVQASPIIDSQVNMAQGSYKKPK--CSYCNKLGHLVDKCYKKH 316
Query: 241 GYPNVNKAQPRVNAVTHEDVDAGTSSSIGQ--GSSTSSNAGFSQEQLVQLASLLQQANLV 298
GYP +K + + ++ + + + T S FS +Q+ + S L +
Sbjct: 317 GYPPGSK-WTKGQTIGSTNLASTQLQPVNETPNEKTDSYEEFSTDQIQTMISYLSTKLHI 375
Query: 299 VPASSSSQASSNHISANP-----------------------LISTTISAPESSSAGIIPK 335
AS SS ISA+P LIS+ P S G
Sbjct: 376 ASASPMPTTSSASISASPSVPMISQISGTFLSLFSNAYYDMLISSVSQEPAVSPRG---- 431
Query: 336 PSYWLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVL 395
W++DSGA H++ N + +F + +V LPN V + G + + L +VL
Sbjct: 432 ---WVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLSDAISLHNVL 488
Query: 396 YSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSS 455
Y P F NLIS +L + L MIG Q+ LY
Sbjct: 489 YIPEFKFNLIS--ELTKEL--------------------MIGRGSQVGNLYVL-----DF 521
Query: 456 NSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNK 515
N +VS K + SS + + WH RLGH ++ ++ +S + + NK
Sbjct: 522 NENNHTVSLKGTTSMCPEFSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINK 581
Query: 516 D------VCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVD 569
+ VC +CH +K KHL F S + S F+L+H+D WGP S+ +
Sbjct: 582 EHSPVCHVCHVCHLSKQKHLSFQSRQNMCSAAFDLVHIDTWGPFSVPT------------ 629
Query: 570 DHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIH 629
+ W+ LLK+K++V FI M+ TQ+ K +R+DN E + +A+HGI+
Sbjct: 630 --NDATWIYLLKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHELKFTDLFAAHGIVA 687
Query: 630 QKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHN 689
SC ETP+QN VERKHQHILNV RALLFQS +P FW +L AVFLINR+PTP+L+N
Sbjct: 688 YHSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNN 747
Query: 690 QSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDI 749
+SPY L + PA K FGCLCY+ST R K +PRAR +FLGY G+KG+ L DI
Sbjct: 748 KSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDI 807
Query: 750 QSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDI-L 808
++ + +SRHV FHE P+ SS+ D+ + + PA DD+ L
Sbjct: 808 ETHAVSISRHVIFHEDIFPF-------------ISSTIKDDIKDFFPLLQFPARTDDLPL 854
Query: 809 PPSPPINPPPPPPIP---VVSPASRTSTRQTTTPSYLQDYVCNNIHTSPYPINNYISHHN 865
+ I+ P + + P S RQ P +LQD+ C N T P+ H
Sbjct: 855 EQTSIIDTHPHQDVSSSKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPF--------HA 906
Query: 866 LSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIG 925
NN ++ V+ P+ Y+EA W AM+ E+ A+ +T TW +V LP N K IG
Sbjct: 907 FINNITNAVI-------PQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIG 959
Query: 926 CRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNW 985
C+W++ +K++ADGSIER+KARLVAKGY Q EGLDY +T+SPVAKLT++R+++ L++ W
Sbjct: 960 CKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKW 1019
Query: 986 HLHQLDVNNAFLHGDLQEDVYMLIPPGI-----KSNKPNQVCKLQKSLYGLKQASRKWYE 1040
+HQLD++NAFL+GDL E++YM IPPG ++ P+ +C+L KS+YGLKQASR+WY
Sbjct: 1020 SVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYL 1079
Query: 1041 KLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASF 1100
KL++ L + ++++DH+LF+K + +LVYVDDI+I +S + L + F
Sbjct: 1080 KLSNTLKGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYF 1139
Query: 1101 KIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDS 1160
K++DLG KYFLGIE+A S+ GIS+CQRKY L+LL+ +G + SKP S P D S+KL+++
Sbjct: 1140 KLRDLGAAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKED 1199
Query: 1161 SPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCP 1220
D SYR+LVG+L+YL TRPDI + L QF PT H +A +VLRYLKG
Sbjct: 1200 GVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTV 1259
Query: 1221 GRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSE 1280
G+GLF+ + +L+G++D+D+ C D+RR ++ C F+G+ L+SW++KKQ TVS S++E
Sbjct: 1260 GQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAE 1319
Query: 1281 AEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDC 1340
AE+RA++ T E+ W+ L D + LYCDN +ALHI N VFHERTK +E+DC
Sbjct: 1320 AEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDC 1379
Query: 1341 HIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
+ RE V++G LK + V + +QVAD TKA+ P F+ L+ KMG+ NI+ P
Sbjct: 1380 YKTREAVESGFLKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGVCNIFAP 1430
Score = 32.0 bits (71), Expect = 2.6
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 784 SSSNFSDVSNQPTPINSP-AIIDDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYL 842
SSS S+ S T S + DDI+ P P + V++ R + + SY
Sbjct: 12 SSSPTSEYSPMKTRAGSSYPVADDIVEP---------PSLKVMANRDRFQSNSASIESYD 62
Query: 843 QDYVCNNIHTSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKS 885
+ +H+S +P N +SH NY+++ +++ + + K+
Sbjct: 63 NAHSPYFLHSSDHPGLNIVSHILDGTNYNNWSIAMRMSLDAKN 105
>At2g13940 putative retroelement pol polyprotein
Length = 1501
Score = 949 bits (2452), Expect = 0.0
Identities = 550/1479 (37%), Positives = 814/1479 (54%), Gaps = 133/1479 (8%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L K K GFING IP P +D N W N ++ W+ S+ + T+ F A +
Sbjct: 64 ALQAKRKTGFINGTIPRPPPNDPNYENWTAVNSMIVGWIRTSIEPKVKATVTFISDAHLL 123
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W DL++RFS +++RI +R+ +++ +Q ++V++Y+ + LWEE ++P+ C+C
Sbjct: 124 WKDLKQRFSVGNKVRIHQIRAQLSSCRQDGQAVIEYYGRLSNLWEEYNIYKPVTVCTC-G 182
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEESN 182
CRC A+ R E++I QF+ GL++ +F + ++ +DPLPSL ++YS V++EE
Sbjct: 183 LCRCGATSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGEIYSRVIREEQR 242
Query: 183 NASLSSLSVSD------------DSSIQINASDVR-KFQGRGKNPSQPKPTRLCTFSNRT 229
AS+ + D +++AS R + G ++ S K C+ RT
Sbjct: 243 LASVHVREQKEEAVGFLARREQLDHHSRVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRT 302
Query: 230 NHTVDFCYLKHGYPNV-NKAQPRVNAVTHEDVDAGTSSSIGQGS-----STSSNAG---- 279
H C+ G+P+ ++ + G++ GQG +TSSN+
Sbjct: 303 GHEKKECWQIVGFPDWWSERNGGRGSNGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPE 362
Query: 280 FSQEQLVQLASLLQQANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYW 339
F++E + L+ L+++ + + S+S +S+ +S + I
Sbjct: 363 FTEEHMRVLSQLVKEKS---NSGSTSNNNSDRLSGKTKLGDII----------------- 402
Query: 340 LLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPA 399
LDSGA+ H++ LS ++ +PP V + + G ++ ++ L++VL+ P+
Sbjct: 403 -LDSGASHHMTGTLSSLTNVVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPS 461
Query: 400 FTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVF 459
LISV+KL + FT C +QD S +IG ++ G+Y T
Sbjct: 462 LNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVYYLTD--------- 512
Query: 460 SSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDVCD 519
V ++++ ALWH RLGH S L S+ L + S+ CD
Sbjct: 513 ----------VTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPL-FSKTSSTVTSHSCD 561
Query: 520 LCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVIL 579
+C AK F SI+ F L+H D+WGP + + G YFLTIVDD+SR +W L
Sbjct: 562 VCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYL 621
Query: 580 LKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQ 638
L K+EV + NF+ + QF T K +R+DNG EFM LS+++ +GIIHQ SCV TPQ
Sbjct: 622 LLEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMCLSSYFRENGIIHQTSCVGTPQ 681
Query: 639 QNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHH 698
QNGRVERKH+HILNV RALLFQ+ LP FW +IL A +LINR P+ IL ++PY VLH
Sbjct: 682 QNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHG 741
Query: 699 QLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSR 758
P + +VFG CY + + K R+R IF+GY G KG+ +YDI+ E VSR
Sbjct: 742 SKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSR 801
Query: 759 HVTFHETFLPYPHTSLS-------------------------------------TTPNWE 781
V F E PY + S TT
Sbjct: 802 DVIFREEVFPYAGVNSSTLASTSLPTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDEVV 861
Query: 782 YFSSSNFSDVSNQ-----PTPINSPAIIDDILPPSPPINP---PPPPPIPVVSPASRTST 833
+S + S++ NQ TP +SP + P+ P P P PIPV P R S
Sbjct: 862 LDTSVSDSEIPNQEFVPDDTPPSSPLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRKSK 921
Query: 834 RQTTTPSYLQDYVCNN-------IHTSP--------------YPINNYISHHNLSNNYSS 872
R T P L DYV N IH P +P+ +Y+S S+++ +
Sbjct: 922 RATHPPPKLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRA 981
Query: 873 FVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKV 932
++ ++ EPK + EA + W AM E+ ALE TW +VDLP IG +W++K
Sbjct: 982 YLAAITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKT 1041
Query: 933 KYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDV 992
KY++DG++ER+KARLV +G Q+EG DY +T++PV ++TT+R ++ + + W ++Q+DV
Sbjct: 1042 KYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDV 1101
Query: 993 NNAFLHGDLQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYI 1052
+NAFLHGDL+E+VYM +PPG + + P++VC+L+KSLYGLKQA R W++KL+ L ++
Sbjct: 1102 HNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFV 1161
Query: 1053 QASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFL 1112
Q+ D+SLF ++ +L+YVDD++I G+ K L F +KDLG+LKYFL
Sbjct: 1162 QSYEDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFL 1221
Query: 1113 GIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRR 1172
GIEV+ GI L QRKY LD++ADSG + S+P TP + + L D P +D YRR
Sbjct: 1222 GIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRR 1281
Query: 1173 LVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSI 1232
LVGRLLYL TRP++++ L+QF+ P +AH AALRV+RYLKG PG+G+ + +
Sbjct: 1282 LVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDL 1341
Query: 1233 NLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCE 1292
L+ + D+DW C TRRSIS LG S ISW+TKKQ TVS SS+EAEYRA++ A E
Sbjct: 1342 TLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKE 1401
Query: 1293 LQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGIL 1352
++W+ LL+++ I LYCD+++A+HIAANPVFHERTKH+E DCH VR+ V+ GI+
Sbjct: 1402 IKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGII 1461
Query: 1353 KLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
V + +Q+AD FTKAL F L+SK+G+ N++ P
Sbjct: 1462 TTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTP 1500
>At1g26990 polyprotein, putative
Length = 1436
Score = 940 bits (2430), Expect = 0.0
Identities = 554/1450 (38%), Positives = 779/1450 (53%), Gaps = 169/1450 (11%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
SL KNKLGF++G + P DD W RCN +V
Sbjct: 90 SLDAKNKLGFVDGSLLRPSVDDSTFRIWSRCNSMV------------------------- 124
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
++L R+ L + L+QG + YFT+ K LWE+LA+ + +
Sbjct: 125 -NNLPRRYQ---------LEQAVMTLQQGKLDLSTYFTKKKTLWEQLANTKS----RSVK 170
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
C C+ K +++QFL GL+D F+ +R+Q+ + P P LN++Y+++ Q+ES
Sbjct: 171 KCDCDQVKELLEEAETSRVIQFLMGLSDDFNTIRSQIFNMKPRPGLNEIYNMLDQDESQR 230
Query: 184 -ASLSSLSVSDDSSIQINASDVRKFQGR----GKNPSQPKPTRLCTFSNRTNHTVDFCYL 238
++ SV S V Q N +PK CT NR HTVD CY
Sbjct: 231 LVGFAAKSVPSPSPAAFQTQGVLNDQNTILLAQGNFKKPK----CTHCNRIGHTVDKCYK 286
Query: 239 KHGYPNVNKAQPRVNAVTHEDVD--AGTSSSIGQGSSTSSNAG---FSQEQLVQLASLLQ 293
HGYP PR T+ A T Q T S G S + + QL S L
Sbjct: 287 VHGYP---PGHPRAKENTYVGSTNLASTDQIETQAPPTMSATGHETMSNDHIQQLISYLS 343
Query: 294 QANLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSY--------------- 338
L P+ +S + S+NP+ S + ++ ++ P PS
Sbjct: 344 -TKLQSPSITSCFDKAIASSSNPVPSISQITDKAIASSSNPVPSISQITGTFFSLYDSTY 402
Query: 339 ------------------WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYA 380
W++DSGA+ H++ + + ++ + +V LPN V ++
Sbjct: 403 YEMLTSSIPIETELSLRAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGT 462
Query: 381 GTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAK 440
G + T L +VL+ P F NL+SV+ L ++L + FTS C+IQ M+G
Sbjct: 463 GFIQLTDALSLHNVLFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGS 522
Query: 441 QLDGLYKYT-------PSSCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGH 493
Q+ LY SS SV SSV ++S +WH RLGH
Sbjct: 523 QVGNLYILNLDKSLVDVSSFPGKSVCSSVKNES------------------EMWHKRLGH 564
Query: 494 LSHQRLHSMS--LLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWG 551
S ++ ++S L+ P + + C +CH +K KHLPF S FEL+H+D WG
Sbjct: 565 PSFAKIDTLSDVLMLPKQKINKDSSHCHVCHLSKQKHLPFKSVNHIREKAFELVHIDTWG 624
Query: 552 PLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTD 611
P S+ +V +RYFLTIVDD SR W+ LLK K++V T +F+ M++TQ+H +R+D
Sbjct: 625 PFSVPTVDSYRYFLTIVDDFSRATWIYLLKQKSDVLTVFPSFLKMVETQYHTKVCSVRSD 684
Query: 612 NGPEFMLSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYA 671
N E + +A GI C ETP+QN VERKHQH+LNV RAL+FQS +P +W
Sbjct: 685 NAHELKFNELFAKEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDC 744
Query: 672 ILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARK 731
+L AVFLINR+ +P+++N++PY L P + K FGCLCY ST RTK PRA+
Sbjct: 745 VLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKA 804
Query: 732 SIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDV 791
IFLGY G+KG+ L DI++ + +SRHV F+E P F+SSN +D
Sbjct: 805 CIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFP--------------FASSNITDA 850
Query: 792 SNQPTP-INSPAIIDDILPPSPPINPPPP-----PPIPVVSPASRTSTRQTTTPSYLQDY 845
+ P I PA +D P + P + P+ STRQ PS+LQD+
Sbjct: 851 AKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSMIFVPSEPKSTRQRKLPSHLQDF 910
Query: 846 VCNN-----IHTSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQ 900
C N TSPYP+ NYIS+ LS + +F+ + T P+ Y+EA W AM
Sbjct: 911 HCYNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITATKLPQKYSEARLDKVWNDAMG 970
Query: 901 VELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDY 960
E+ A +TGTW + DLP+ +GC+WI +K+ ADGSIERHKARLVAKGY Q EG+D+
Sbjct: 971 KEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDF 1030
Query: 961 FDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNKPNQ 1020
F+T+SPVAK+ T++++++L+ W+LHQLD++NA L+GDL+E++YM +PPG + +
Sbjct: 1031 FNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSEIQGQE 1090
Query: 1021 VCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDII 1080
V K DH+LFVK F ++LVYVDDI+
Sbjct: 1091 VSPNAK---------------------------CHGDHTLFVKAQDGFFLVVLVYVDDIL 1123
Query: 1081 IAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGT 1140
IA + + S L + F+++DLG+ K+FLGIE+A + GISLCQRKY LDLLA S
Sbjct: 1124 IASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIARNADGISLCQRKYVLDLLASSDF 1183
Query: 1141 IDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQ 1200
D KP S P + + KL +D+ D YRR++G+L YL TRPDI F +L+Q+ S
Sbjct: 1184 SDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSA 1243
Query: 1201 PTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLG 1260
PT H A ++LRYLKG G+GLF+ +++ +L+GFSD+DW C DTRR ++G F+G
Sbjct: 1244 PTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVG 1303
Query: 1261 NSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSA 1320
NSL+SWR+KKQ VS SS+EAEYRA++ AT EL W+ Y+L I LYCDN++A
Sbjct: 1304 NSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDNEAA 1363
Query: 1321 LHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILL 1380
LHIA N VFHERTKH+E DCH VRE ++AGILK + V + +Q+AD TK L PKPF
Sbjct: 1364 LHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTKPLYPKPFRENN 1423
Query: 1381 SKMGLINIYQ 1390
SK+GL+NIY+
Sbjct: 1424 SKLGLLNIYE 1433
>At4g14460 retrovirus-related like polyprotein
Length = 1489
Score = 918 bits (2373), Expect = 0.0
Identities = 551/1537 (35%), Positives = 808/1537 (51%), Gaps = 269/1537 (17%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L +NKLGFING I P D + AW RCN +V +WL+NSV I Q++++ T +
Sbjct: 67 ALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGI 126
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W++L RF + D RI ++ ++ ++QGS + Y+T + LWEE ++ +P C+C
Sbjct: 127 WNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHRNYVELPVCTCGR 186
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNN 183
C C+A+ + + ++ +FL LN+ F R +L+L P+P++ + +++V Q+E
Sbjct: 187 -CECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEAFNMVTQDERQR 245
Query: 184 ASLSSLSVSDDSSIQINASDVRKFQGR---GKNPSQPKPTRLCTFSNRTNHTVDFCYLKH 240
++ L+ D + Q N S + + + N +P +CT + HT+ CY H
Sbjct: 246 -NVKPLTRVDSVAFQ-NTSMINEDENAYVAAYNTVRPNQKPICTHCGKVGHTIQKCYKVH 303
Query: 241 GYPNVNK-------------------------------AQPRVNAVTHEDVDAGTSSSIG 269
GYP K AQP N++ +V A + G
Sbjct: 304 GYPPGMKTGNTGYTYKPNPQLHVQPRMPMMPQPRMQFPAQPYTNSMQKANVVAQVYAETG 363
Query: 270 -------------------------QGSSTSSNAGFSQEQLVQLASLLQ-QANLVVPASS 303
G + S F+ +Q+ Q+ S Q Q + PA+S
Sbjct: 364 AYPSEGYSQAPMMNPYGSYPMPHITHGGNNLSLQDFTPQQIEQMISQFQAQVQVPEPAAS 423
Query: 304 SSQASSNHISANPLISTT---ISAPESSSAGIIPKPSY---------------------- 338
SS S PL + + A S+S IIP PS
Sbjct: 424 SSNPS-------PLATVSEHGFMALTSTSGTIIPFPSTSLKYENNDLKFQNHTLSALQKF 476
Query: 339 -----WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSH 393
W++DSGA+ H+ +L+ F L +GTV T L +
Sbjct: 477 LPSDAWIIDSGASSHVCSDLAMFRE-----------------LKSVSGTVHITQKLILHN 519
Query: 394 VLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSC 453
VL+ P F NL+SV+ L +++S S HF C+IQ+ MIG + LY +
Sbjct: 520 VLHVPDFKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGRLYHNLYILETENT 579
Query: 454 SSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSN 513
S S+ + +C ++ + LWH RLGH S L +
Sbjct: 580 SP----STSTPAACLFTGSV-------LNDGHLWHQRLGHPSSVVLQKL----------- 617
Query: 514 NKDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSR 573
K L + S + AS F+L+HLDIWGP SI S+ G RYFLT+VDD +R
Sbjct: 618 -------------KRLAYISHNNLASNPFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTR 664
Query: 574 FLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSC 633
WV +L++K +VS+ FI ++ TQF+ K IR+DN PE + HG++H SC
Sbjct: 665 TTWVYMLRNKKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELGFTEIVKEHGMLHHFSC 724
Query: 634 VETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPY 693
TPQQN VERKHQHILNV RALLFQS +P +WS + AVFLINR+P+P+L+N+SPY
Sbjct: 725 AYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPY 784
Query: 694 FVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSRE 753
++ ++ P +L K FGCLC+ ST RTK PRAR +FLGY SG+KG+ + D++S
Sbjct: 785 ELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHS 844
Query: 754 IFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPIN----SPAIIDDILP 809
+ VSR+V F E P+ TS + F +S + P P++ P I +D L
Sbjct: 845 VTVSRNVVFKEHVFPF-KTSELLNKAVDMFPNS----ILPLPAPLHFVETMPLIDEDSLI 899
Query: 810 PSPPIN-------PPPPPPIP-VVSPASRTST--------------RQTTTPSYLQDYVC 847
P+ + +P ++ P+S T T R T PSYL +Y C
Sbjct: 900 PTTTDSRTADNHASSSSSALPSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLSEYHC 959
Query: 848 NNI----------------------------HTSPYPINNYISHHNLSNNYSSFVMSLHT 879
+ + T+PYPI+ +S+ + S++ + +T
Sbjct: 960 SLVPSISTLPPTDSSIPIHPLPEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIFAYNT 1019
Query: 880 TTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGS 939
TEPK++++A K + W + ELQA+E TW + LP + +GC+W++ +KY+ DG+
Sbjct: 1020 ETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPDGT 1079
Query: 940 IERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHG 999
+ER+KARLVA+G+ Q EG+D+ DT+SPVAKLT+ ++++ L++I W L Q+DV++AFLHG
Sbjct: 1080 VERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAFLHG 1139
Query: 1000 DLQEDVYMLIPPGIKSN-----KPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQA 1054
DL E+++M +P G PN VC+L KS+YGLKQASR+WY++
Sbjct: 1140 DLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKR------------- 1186
Query: 1055 SSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGI 1114
F LVY+DDI+IA ++ E +K++L + FKIKDLG ++FLG+
Sbjct: 1187 --------------FVAALVYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARFFLGL 1232
Query: 1115 EVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLV 1174
+ KP S P D ++ L +D + +YR+L+
Sbjct: 1233 --------------------------LGCKPSSIPMDPTLHLVRDMGTPLPNPTAYRKLI 1266
Query: 1175 GRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINL 1234
GRLLYL TRPDIT+ QLSQF+S P+ H AA +VLRY+K PG+GL + + I L
Sbjct: 1267 GRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEICL 1326
Query: 1235 QGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQ 1294
GFSDADWA C DTRRSISG C +LG SLISW++KKQ SRSS+E+EYR++A ATCE+
Sbjct: 1327 NGFSDADWAACKDTRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEII 1386
Query: 1295 WILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKL 1354
W+ LL+D+HI L+CDN+SALH + NPVFHERTKH+EIDCH VR++++AG LK
Sbjct: 1387 WLQQLLKDLHIPLTCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKA 1446
Query: 1355 LPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
L V +++Q AD TKAL P PF+ LL +M L +++ P
Sbjct: 1447 LHVPTENQHADILTKALHPGPFHHLLRQMSLSSLFLP 1483
>At1g57640
Length = 1444
Score = 860 bits (2221), Expect = 0.0
Identities = 514/1471 (34%), Positives = 787/1471 (52%), Gaps = 163/1471 (11%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L ++ K GF++G IP P + W N L+ SW+ ++ + I D A ++
Sbjct: 53 ALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINALLVSWMKMTIDSELLTNISHRDVARDL 112
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W +++RFS + + +++ + KQ +V Y+ ++ +W+ + S+RP+ C C
Sbjct: 113 WEQIRKRFSVSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIWDNINSYRPLRICKCGR 172
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEES- 181
C C + +R +D + Q+L GLN+ +F +R+ + PLP L +VY++V QEE
Sbjct: 173 -CICNLGTDQEKYREDDMVHQYLYGLNETKFHTIRSSLTSRVPLPGLEEVYNIVRQEEDM 231
Query: 182 -NNASLSSLSVSDDSSIQINASDVRK------FQGRGKNPSQPKPTRLCTFSNRTNHTVD 234
NN S S++ + A V+ + N + + +LCT NR H+ +
Sbjct: 232 VNNRS------SNEERTDVTAFAVQMRPRSEVISEKFANSEKLQNKKLCTHCNRGGHSPE 285
Query: 235 FCYLKHGYPNVNKAQPRVNAVTHEDVDAGTSSSIGQGS-STSSNAGFSQEQLVQLASL-- 291
C++ GYP +PR + ++ S+S G+G N G + V +
Sbjct: 286 NCFVLIGYPEWWGDRPRGKS------NSNGSTSRGRGRFGPGFNGGQPRPTYVNVVMTGP 339
Query: 292 ---LQQANLVVPASSSSQASSNHISA--------NPLISTTISAPESSSAGIIPKPSYWL 340
+ N V+ S S N S S + +G + W+
Sbjct: 340 FPSSEHVNRVITDSDRDAVSGLTDEQWRGVVKLLNAGRSDNKSNAHETQSGTCSLFTSWI 399
Query: 341 LDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAF 400
LD+GA+ H++ NL S + PV + L + + GTV S+ L V Y
Sbjct: 400 LDTGASHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKEL 459
Query: 401 THNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFS 460
+LISV ++ + HC+
Sbjct: 460 ESDLISVGQMMDE---------NHCV---------------------------------- 476
Query: 461 SVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNK---DV 517
N A ++S P + LWH RLGH S + ++LL ++SS + +V
Sbjct: 477 -------NAAAV---HTSVKAPFD-LWHRRLGHASDK---IVNLLPRELLSSGKEILENV 522
Query: 518 CDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWV 577
CD C AK F S + + +F+L+H D+WGP S G RYFLTIVDD+SR +WV
Sbjct: 523 CDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSRGVWV 582
Query: 578 ILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYASH-GIIHQKSCVET 636
L+ K+E H+ +FI +++ QF K +R+DNG EF+ Y H GI H+ SCV T
Sbjct: 583 YLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETSCVGT 642
Query: 637 PQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVL 696
P QNGRVERKH+HILN+ RAL FQS LP FW IL A +LINR P+ +L +SPY +L
Sbjct: 643 PHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEML 702
Query: 697 HHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFV 756
+ P + +VFG LCYA K R+R+ +F+GY G KG+ L+D++ ++ FV
Sbjct: 703 YKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 762
Query: 757 SRHVTFHETFLPY---------------------------PHT-------------SLST 776
SR V F ET PY P T +++T
Sbjct: 763 SRDVIFQETEFPYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIGEATVGPNVAT 822
Query: 777 TP-----NWEYFSSSNFSDVSN-QPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPASR 830
P N E S S F +S+ P +S D+ P++ P PI + R
Sbjct: 823 GPIIPEINQESSSPSEFVSLSSLDPFLASSTVQTADL-----PLSSTTPAPIQL-----R 872
Query: 831 TSTRQTTTPSYLQDYVCNNI----------HTSPYPINNYISHHNLSNNYSSFVMSLHTT 880
S+RQT P L+++V N + +S YPI Y+ H ++++ +F+ ++
Sbjct: 873 RSSRQTQKPMKLKNFVTNTVSVESISPEASSSSLYPIEKYVDCHRFTSSHKAFLAAVTAG 932
Query: 881 TEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSI 940
EP +Y EA W++AM E+++L T+ +V+LP + +G +W+YK+KY +DG+I
Sbjct: 933 MEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAI 992
Query: 941 ERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGD 1000
ER+KARLV G Q EG+DY +T++PVAK++T+RL + +++ +WH+HQ+DV+NAFLHGD
Sbjct: 993 ERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGD 1052
Query: 1001 LQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSL 1060
L+E+VYM +P G + + P++VC+L KSLYGLKQA R W+ KL+S L + + Q+ SD+SL
Sbjct: 1053 LKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSL 1112
Query: 1061 FVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSK 1120
F F +LVYVDD+II+G KS L++ F +KDLG LKYFLGIEV+ +
Sbjct: 1113 FSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNA 1172
Query: 1121 LGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYL 1180
G L QRKY LD++++ G + ++P + P + + KL +SP +D YRRLVGRL+YL
Sbjct: 1173 QGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYL 1232
Query: 1181 NTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDA 1240
TRP++++ L+QF+ P Q H AA+RV+RYLK PG+G+ S++ + G+ D+
Sbjct: 1233 VVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDS 1292
Query: 1241 DWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLL 1300
D+A C TRRS++G LG++ ISW+TKKQ TVSRSS+EAEYRA+A T EL W+ +L
Sbjct: 1293 DYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVL 1352
Query: 1301 QDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQ 1360
D+ +S + ++ D++SA+ ++ NPV HERTKH+E+DCH +R+ + GI+ V S
Sbjct: 1353 YDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSH 1412
Query: 1361 DQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
Q+AD TKAL K L K+G+++++ P
Sbjct: 1413 KQLADILTKALGEKEVRYFLRKLGILDVHAP 1443
>At4g07810 putative polyprotein
Length = 1366
Score = 731 bits (1887), Expect = 0.0
Identities = 478/1434 (33%), Positives = 724/1434 (50%), Gaps = 221/1434 (15%)
Query: 47 SDSIAQTIVFYDTAFEVWHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKAL 106
S + +V++ A +W L+ R + + +I ++++ ++ L QGS + Y+T +
Sbjct: 64 SGDLGSGMVYFYDAHLLWLKLEGRSRQSNLSKIYSVQNQLDRLHQGSLDLSAYYTRLTVT 123
Query: 107 --------WEELASHRPIPNCSCIHPCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRT 158
WEEL + +P+C+C C C ++ + I++FL LN+ F R
Sbjct: 124 FIRSQCLSWEELKNFEELPSCTC-GKCTCGSNDRWIQLYEKHNIVRFLMRLNESFIQARR 182
Query: 159 QVLLLDPLPSLNKVYSLVVQEESNNASLSSLSVSDDSSIQINASDVRK--FQGRGKNPSQ 216
Q+L++DPLP +Y+ + Q++ S +S+ ++ Q + + + F +GK S+
Sbjct: 183 QILMMDPLPEFTNLYNFISQDDQQR-SFNSMPTTEKPVFQASITQQKPKFFNQQGK--SR 239
Query: 217 PKPTRLCTFSNRTNHTVDFCYLKHGYPN---------VNKAQPRVNAVTHEDV------- 260
P LCT+ HT CY HGYP N + R H +
Sbjct: 240 P----LCTYCGLLGHTNARCYKLHGYPPGYKVPVGTCYNNDKSRGQPYPHNGIHMSHLIT 295
Query: 261 -DAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQ--ANLVVPASSSSQASSNHISANPL 317
+ + + I Q ++ + A ++Q + + Q A + + SS ++ N S +P
Sbjct: 296 YNGNSYAPIVQANNNAPYALYNQAYNGNSYAPMAQNFAGNHIISDGSSMSAGNVTSESPT 355
Query: 318 ISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLV 377
++ +++ +S G + S+ E ++ ++ ++ + P V P +
Sbjct: 356 VNHSVNMM-NSGRGFLGSSSH------GREQVNQMVTQLNTQLQGSPYQVIRPP---TVS 405
Query: 378 QYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIG 437
Q G++S SP +H Y F I Q+T SL
Sbjct: 406 QNHGSISAQG--------MSPIPSH-------------YISAFEPCLIIPQNTWSLDT-- 442
Query: 438 LAKQLDGLYKYTPSSCSSNSVFSSVSHK-------------SCNVVATISCNSSSS---- 480
+ + C S+F +V H S N+ T+ N
Sbjct: 443 ---------RASCHICCDLSLFCNVYHIDHTNITLPNNIKISINIAETVKLNDRLILHLV 493
Query: 481 --IPSNALWHF----RLGHLSHQRLHSMS--LLYPNIISSNNKDVCDLCHFAKHKHLPFN 532
+PS +HF RLGH S R+ ++S L P +S + C +CH +K K L F
Sbjct: 494 FYVPS---FHFNLISRLGHPSMSRVQALSSNLHIPQKLSEFH---CKICHLSKQKCLSFV 547
Query: 533 SSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVIN 592
S+ F L+H+D ++V+T
Sbjct: 548 SNNKIYEEPFPLIHID-----------------------------------SDVTTIFPE 572
Query: 593 FITMIQTQFHITPKFIRTDNGPEFMLSTFYASHGIIHQKSCVETPQQNGRVERKHQHILN 652
F+ ++QTQF T K IR+DN PE A+ GI H SC TPQQN VER HQH+LN
Sbjct: 573 FLKLVQTQFGCTVKSIRSDNAPELQFKDLLATFGIFHYHSCAYTPQQNYVVERNHQHLLN 632
Query: 653 VGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCL 712
V R+L FQS +P ++W + A FLINR PTP L ++SPY VL+ +LP N +VF CL
Sbjct: 633 VARSLYFQSNIPLAYWPECVSTAAFLINRTPTPNLEHKSPYEVLYKKLPDYNSLRVFCCL 692
Query: 713 CYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHT 772
CYAST Q R K RA +F+GY+SGFKG+ + D++S + V+R+V FHET P+
Sbjct: 693 CYASTHQHERHKFTERATSCVFIGYESGFKGYKILDLESNTVSVTRNVVFHETIFPF--I 750
Query: 773 SLSTTPNWEYFSSSNFSDVSNQPTPINSPAIID-------DILPPSPPINPPPPPPIPVV 825
+T N +F S Q N I D ++ P P P +
Sbjct: 751 DKHSTQNVSFFDDSVLPISEKQKE--NRFQIYDYFNVLNLEVCPVIEPTTVPAHTHTRSL 808
Query: 826 SPASRTST---------------RQTTTPSYLQDYVCNNI--------HTSPYPINNYIS 862
+P S T T ++T PSYL Y C+N+ H + + +++++S
Sbjct: 809 APLSTTVTNDQFGNDMDNTLMPRKETRAPSYLSQYHCSNVLKEPSSSLHGTAHSLSSHLS 868
Query: 863 HHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIK 922
+ LSN Y F ++ EP ++ EA+ W AM VEL AL T T ++ L +
Sbjct: 869 YDKLSNEYRLFCFAIIAEKEPTTFKEAALLQKWLDAMNVELDALVSTSTREICSLHDGKR 928
Query: 923 PIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSI 982
IGC+W++K+KY +DG+IER+KARLVA GY Q EG+DY DT+SP+AKLT++RL++AL++I
Sbjct: 929 AIGCKWVFKIKYKSDGTIERYKARLVANGYTQQEGVDYIDTFSPIAKLTSVRLILALAAI 988
Query: 983 HNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNK-----PNQVCKLQKSLYGLKQASRK 1037
HNW + Q+DV NAFLHGD +E++YM +P G K VC+L KSLYGLKQASR+
Sbjct: 989 HNWSISQMDVTNAFLHGDFEEEIYMQLPQGYTPRKGELLPKRPVCRLVKSLYGLKQASRQ 1048
Query: 1038 WYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLD 1097
W+ K + VL + ++Q+ D +LFV+ +F LLVYVDDI++ + + +K +L
Sbjct: 1049 WFHKFSGVLIQNGFMQSLFDPTLFVRVREDTFLALLVYVDDIMLVSNKDSAVIEVKQILA 1108
Query: 1098 ASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLH 1157
FK+KDLGQ +YFLG+E+A SK GIS+ QRKY L+LL + G + KPV TP + ++KL
Sbjct: 1109 KEFKLKDLGQKRYFLGLEIARSKEGISISQRKYALELLEEFGFLGCKPVPTPMELNLKLS 1168
Query: 1158 QDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLK 1217
Q+ D YR+L+GRL+YL TRPDI F +L+Q++S P + H AA R+LRYLK
Sbjct: 1169 QEDGALLLDASHYRKLIGRLVYLTVTRPDICFAVNKLNQYMSAPREPHLMAARRILRYLK 1228
Query: 1218 GCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRS 1277
PG+G+F+P +S++ + F+DADW+ C ++ SIS ++ W +
Sbjct: 1229 NDPGQGVFYPASSTLTFRAFADADWSNCPESSISIS---------IVFWL--------KL 1271
Query: 1278 SSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLE 1337
S+EA W++ +S P +Y D++SALHIA N VFHE TK+
Sbjct: 1272 STEA-------------WLV-------LSLPDTIFVYYDDESALHIAKNSVFHESTKNFL 1311
Query: 1338 IDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
D H+VREKV G +K L V ++ + D TK L FN LLSKMGL ++Y P
Sbjct: 1312 HDIHVVREKVAVGFIKTLHVDTEHNIVDLLTKPLTALRFNYLLSKMGLHHLYSP 1365
>At1g44510 polyprotein, putative
Length = 1459
Score = 714 bits (1842), Expect = 0.0
Identities = 483/1467 (32%), Positives = 721/1467 (48%), Gaps = 169/1467 (11%)
Query: 15 NGVIPIPDADDLNRAA--------WERCNHLVQSWLINSVSDSIAQTIVFYDTAFEVWHD 66
N V+ P+ +N W+R + L+ S LI ++S ++ + + ++W
Sbjct: 60 NSVVIPPETTTINSVVSANPSFTLWKRQDKLIFSALIGAISPAVQSLVSRATNSSQIWST 119
Query: 67 LQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIHPCR 126
L ++K I LR I L +G+K++ +Y ++LA
Sbjct: 120 LNNTYAKPSYGHIKQLRQQIQRLTKGTKTIDEYVQSHTTRLDQLAI-------------- 165
Query: 127 CEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQVLLLDPLPSLNKVYSLVVQEESNNASL 186
+ K +E+Q+ L GL +++ V Q+ D P++ +++ ++ ES S
Sbjct: 166 -----LGKPMEHEEQVEHILKGLPEEYKTVVDQIEGKDNTPTITEIHERLINHESKLLS- 219
Query: 187 SSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYPNVN 246
+ S + NA R F + T +N TN
Sbjct: 220 DEVPPSSSFPMSANAVQQRNFNNNCNQNQHKNRYQGNTHNNNTN---------------T 264
Query: 247 KAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQANLVVPASSSSQ 306
+QP T+ T S G S + QL ++ +PASSS
Sbjct: 265 NSQPS----TYNKSGQRTFKPYLGKCQICSVQGHSARRCPQLQAMQ------LPASSS-- 312
Query: 307 ASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSSFYRIPP-V 365
A S P + I +P +++ WLLDSGA HI+ +L+ S
Sbjct: 313 AHSPFTPWQPRANLAIGSPYAANP--------WLLDSGATHHITSDLNALSLHQPYNGGE 364
Query: 366 YVSLPNKTCVLVQYAGTVSFTS---NFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTS 422
YV + + T + ++ G+ S + L VLY P NLISV +LC + S+ F
Sbjct: 365 YVMIADGTGLTIKQTGSTFLPSQNRDLALHKVLYVPDIRKNLISVYRLCNTNQVSVEFFP 424
Query: 423 AHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSSSSIP 482
A ++D + ++ + D LY++ ++ + ++F+S S K+ T+S
Sbjct: 425 ASFQVKDLNTGTLLLQGRTKDDLYEWPVTNPPATALFTSPSPKT-----TLSS------- 472
Query: 483 SNALWHFRLGHLSHQRLHSMSLLY--PNIISSNNKDVCDLCHFAKHKHLPFNSSISHAST 540
WH RLGH S L+++ + P ++S+NK C C K LPF +S H+S+
Sbjct: 473 ----WHSRLGHPSASILNTLLSKFSLPVSVASSNKTSCSDCLINKSHKLPFATSSIHSSS 528
Query: 541 NFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQ 600
E + D+W I S ++Y+L +VD ++R+ W+ L+ K++V I F +++ +
Sbjct: 529 PLEYIFTDVWTS-PIISHDNYKYYLVLVDHYTRYTWLYPLQQKSQVKATFIAFKALVENR 587
Query: 601 FHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLF 659
F + + +DNG EF+ L F S+GI H S TP+ NG ERKH+HI+ G LL
Sbjct: 588 FQAKIRTLYSDNGGEFIALRDFLVSNGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLT 647
Query: 660 QSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQ 719
Q+ +P +W+YA AV+LINR+PTP+L QSP+ L P +VFGCLC+
Sbjct: 648 QASVPREYWTYAFATAVYLINRMPTPVLCLQSPFQKLFGSSPNYQRLRVFGCLCFPWLRP 707
Query: 720 SHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPY---------- 769
R KL+ R+++ +FLGY + D+ + ++ SRHV F E+ P+
Sbjct: 708 YTRNKLEERSKRCVFLGYSLTQTAYLCLDVDNNRLYTSRHVMFDESTYPFAASIREQSQS 767
Query: 770 -----PHTSLSTTPNWEYFSSS---------------------NFSDVS----NQPTPIN 799
P +S S++P F S N S VS PTP +
Sbjct: 768 SLVTPPESSSSSSPANSGFPCSVLRLQSPPASSPETPSPPQQQNDSPVSPRQTGSPTPSH 827
Query: 800 SPAIIDDILPPSPPI-------------------NP------PPPPPIPVVSPAS----R 830
+ D L PSP + NP P P P P +P+S R
Sbjct: 828 HSQVRDSTLSPSPSVSNSEPTAPHENGPEPEAQSNPNSPFIGPLPNPNPETNPSSSIEQR 887
Query: 831 TSTRQTTT---PSYLQDYVCNNIHTSPYPINNYISHHNLSNNYS--------SFVMSLHT 879
+ TTT P+ +N + P P NN+ NN + + ++
Sbjct: 888 PVDKSTTTALPPNQTTIAATSNSRSQP-PKNNHQMKTRSKNNITKPKTKTSLTVALTQPH 946
Query: 880 TTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGS 939
+EP + +A K W+ AM E A ++ TW LV +GCRW++K+KY +G
Sbjct: 947 LSEPNTVTQALKDKKWRFAMSDEFDAQQRNHTWDLVPPNPTQHLVGCRWVFKLKYLPNGL 1006
Query: 940 IERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHG 999
I+++KARLVAKG+NQ G+DY +T+SPV K TTIR+V+ ++ NW L QLDVNNAFL G
Sbjct: 1007 IDKYKARLVAKGFNQQYGVDYAETFSPVIKATTIRVVLDVAVKKNWPLKQLDVNNAFLQG 1066
Query: 1000 DLQEDVYMLIPPG-IKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDH 1058
L E+VYM PPG + ++P+ VC+L+K++YGLKQA R WY +L L + ++ + +D
Sbjct: 1067 TLTEEVYMAQPPGFVDKDRPSHVCRLRKAIYGLKQAPRAWYMELKQHLLNIGFVNSLADT 1126
Query: 1059 SLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAH 1118
SLF+ ++ LLVYVDDII+ G + + S L F IKD L YFLGIE
Sbjct: 1127 SLFIYSHGTTLLYLLVYVDDIIVTGSDHKSVSAVLSSLAERFSIKDPTDLHYFLGIEATR 1186
Query: 1119 SKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLL 1178
+ G+ L QRKY DLLA +D+KPV+TP +S KL D YR +VG L
Sbjct: 1187 TNTGLHLMQRKYMTDLLAKHNMLDAKPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQ 1246
Query: 1179 YLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFS 1238
YL TRPDI F +LSQF+ QPT H AA RVLRYL G G+F +S I+L FS
Sbjct: 1247 YLAFTRPDIAFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLHAFS 1306
Query: 1239 DADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILY 1298
DADWAG S + +LG + ISW +KKQ VSRSS+E+EYRA+A+A E++W+
Sbjct: 1307 DADWAGDSADYVSTNAYVIYLGRNPISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCS 1366
Query: 1299 LLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVS 1358
LL ++HI P P ++CDN A +I ANPVFH R KH+ +D H VR +Q+ L++ VS
Sbjct: 1367 LLTELHIRLPHGPTIFCDNIGATYICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVS 1426
Query: 1359 SQDQVADFFTKALLPKPFNILLSKMGL 1385
+ DQ+AD TK+L F SK+G+
Sbjct: 1427 TNDQLADALTKSLSRPHFLSARSKIGV 1453
>At2g07010 putative retroelement pol polyprotein
Length = 1413
Score = 675 bits (1741), Expect = 0.0
Identities = 414/1193 (34%), Positives = 610/1193 (50%), Gaps = 114/1193 (9%)
Query: 4 SLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAFEV 63
+L K K GFING I P D+ + W+ N ++ W+ S+ + T+ F A ++
Sbjct: 59 ALQAKRKTGFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQL 118
Query: 64 WHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSCIH 123
W +L++RFS +++ + +++ + +Q + V+DY+ + LWEE ++PI C C
Sbjct: 119 WSELKQRFSVGNKVHVHQIKTQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKC-G 177
Query: 124 PCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVLLLDPLPSLNKVYSLVVQEESN 182
C C A+ R E++I QF+ GL+D +F + ++ +DP PSL ++YS VV+EE
Sbjct: 178 LCTCGATLEPSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQR 237
Query: 183 NASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTR--LCTFSNRTNHTVDFCYLKH 240
AS+ + + GR + R LC+ R+ H C+
Sbjct: 238 LASVQIREQQQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIV 297
Query: 241 GYPNVNKAQPRVNAVTHEDVDAGTSSSIGQG--SSTSSNAGFSQEQLVQLASLLQQANLV 298
G+P+ R N SSS G+G SS S+N+G + Q+ + +
Sbjct: 298 GFPDW--WTERTNG------GGRGSSSRGRGGRSSGSNNSGRGRGQVTAAHATTSNLSPF 349
Query: 299 VPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSS 358
+ + N T+ G + +LD+GA+ H++ LS ++
Sbjct: 350 PEFTPDQLRVITQMIQNKNNGTSDKLSGKMKLGDV------ILDTGASHHMTGQLSLLTN 403
Query: 359 FYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSL 418
IP V + GT + LS+VLY PA +LISV+KL + +
Sbjct: 404 IVTIPSCSVGFADGRKTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLA 463
Query: 419 HFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSS 478
FT C++QD S +IG ++ DG+Y T + AT + +
Sbjct: 464 LFTDTICVLQDRFSRTLIGTGEERDGVYYLTDA-------------------ATTTVHKV 504
Query: 479 SSIPSNALWHFRLGHLSHQRLHSMSLLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISHA 538
+ALWH RLGH S L S+ L + S +++ CD+C AK F S + +
Sbjct: 505 DITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRS-CDVCFRAKQTREVFPDSSNKS 563
Query: 539 STNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQ 598
+ F L+H D+WGP + S G YFLTIVDD SR +W LL +K+EV + + NF+ +
Sbjct: 564 TDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTE 623
Query: 599 TQFHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRAL 657
QF + K IR+DNG EFM LS+++ GI+HQ SCV TPQQNGRVERKH+HILNV RAL
Sbjct: 624 KQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRAL 683
Query: 658 LFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYAST 717
LFQ+ LP FW A++ A +LINR P+ I + SPY +LH P + +VFG CYA
Sbjct: 684 LFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHR 743
Query: 718 LQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPY-------- 769
+ + K R+R IF+GY G KG+ +YD+ + E VSR V F E PY
Sbjct: 744 VTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENVFPYATNEGDTI 803
Query: 770 ----------------PHTSLSTTPNWEYFSS------SNFSDVSNQ-PTPINSPAIIDD 806
P T+L + E + S +N S+ + TP + P +DD
Sbjct: 804 YTPPVTCPITYDEDWLPFTTLEDRGSDENYLSDPPVCVTNVSESDTEHDTPQSLPTPVDD 863
Query: 807 ILPPSPPINPPPPP--------PIPVVSPASRTST------------RQTTTPSYLQDYV 846
L PS + P P P VSP + +T RQ P+ L+DY+
Sbjct: 864 PLSPSTSVTPTQTPTNSSSSTSPSTNVSPPQQDTTPIIENTPPRQGKRQVQQPARLKDYI 923
Query: 847 CNNIHTSP----------------------YPINNYISHHNLSNNYSSFVMSLHTTTEPK 884
N +P YP+ +YIS S + F+ ++ EPK
Sbjct: 924 LYNASCTPNTPHVLSPSTSQSSSSIQGNLQYPLTDYISDECFSAGHKVFLAAITANDEPK 983
Query: 885 SYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHK 944
+ E K W AM E+ ALE TW +VDLP+ IG +W+YK K++ADG++ER+K
Sbjct: 984 HFKEDVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYK 1043
Query: 945 ARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQED 1004
ARLV +G NQIEG DY +T++PV K+TT+R ++ L + + W ++Q+DV+NAFLHGDL+E+
Sbjct: 1044 ARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEE 1103
Query: 1005 VYMLIPPGIKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKK 1064
VYM +PPG + + P++VC+L+KSLYGLKQA R W++KL+ L +IQ D+S F
Sbjct: 1104 VYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYS 1163
Query: 1065 TSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVA 1117
+LVYVDD+II G+ K L F +KDLG+LKYFLGIEV+
Sbjct: 1164 CKGIELRVLVYVDDLIICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVS 1216
Score = 191 bits (485), Expect = 3e-48
Identities = 97/225 (43%), Positives = 146/225 (64%)
Query: 1167 IPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFF 1226
+ ++ +GR + F+ ++S+ P +AH AA+R++RYLKG PG+G+
Sbjct: 1188 VQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDAPREAHLEAAMRIVRYLKGSPGQGILL 1247
Query: 1227 PRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRAL 1286
N + L+ + D+D+ C TRRS+S LG S ISW+TKKQ TVS SS+EAEYRA+
Sbjct: 1248 SANKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAM 1307
Query: 1287 ASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREK 1346
+ A E++W+ LL+++ I+ L+CD+++A+ IAANPVFHERTKH+E DCH VR+
Sbjct: 1308 SVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHSVRDA 1367
Query: 1347 VQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINIYQP 1391
V+ GI+ V + +Q+AD FTKAL F L+SK+G+ N++ P
Sbjct: 1368 VRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHTP 1412
>At1g36620 hypothetical protein
Length = 1152
Score = 657 bits (1696), Expect = 0.0
Identities = 408/1143 (35%), Positives = 609/1143 (52%), Gaps = 91/1143 (7%)
Query: 2 QRSLGTKNKLGFINGVIPIPDADDLNRAAWERCNHLVQSWLINSVSDSIAQTIVFYDTAF 61
+ +L K KLGFI+G + P +D + W + N ++ WL S+ + ++I D A
Sbjct: 55 RNNLQAKQKLGFIDGTLTKPSSDSPDYPRWLQTNSMLVGWLYASLDPQVQKSISVVDNAR 114
Query: 62 EVWHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELASHRPIPNCSC 121
+W L+ R+S + R+ L+ I +Q ++ +YF ++K +W++L + P+ C C
Sbjct: 115 VMWESLRTRYSVGNASRVHQLKYDIVACRQDGQTAANYFGKLKVMWDDLDDYEPLLTCCC 174
Query: 122 IHPCRCEASKVAKIHRNEDQIMQFLTGLND-QFSIVRTQVL---LLDPLPSLNKVYSLVV 177
P C R+ ++I QFL GL+ +F RT +L D SL+ +YS ++
Sbjct: 175 NRPS-CTHRVRQSQRRDHERIHQFLMGLDAAKFGTSRTNILGRLSRDDNISLDSIYSEII 233
Query: 178 QEESNNASLSSLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRL--CTFSNRTNHTVDF 235
EE + L+++ +++A G S + + CT R+NH+ D
Sbjct: 234 AEERH------LTITRSKEERVDAVGFAVQTGVNAIASVTRVNNMGPCTHCGRSNHSADT 287
Query: 236 CYLKHGYPNVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQLASLLQQA 295
C+ HG P + + TSS G+G S++ A+ Q +
Sbjct: 288 CFKLHGVPE-----------WYTEKYGDTSSGRGRGRSSTPRGRGRGHGNSYKANNAQTS 336
Query: 296 NLVVPASSSSQASSNHISANPLISTTISAPESSSAGIIPKPSY------WLLDSGANEHI 349
+ P+SS+S+ S + S + + +A K S +L+DSGA+ H+
Sbjct: 337 H---PSSSASEFSDIPGVSKEAWSAIRNLLKQDTATSSEKLSGKTNCVDFLIDSGASHHM 393
Query: 350 SCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAK 409
+ L + Y IP V LPN + GT+ +N L+HVL+ P + LISVA+
Sbjct: 394 TGFLDLLTEIYEIPHSVVVLPNAKHTIATKKGTLILGANMKLTHVLFVPDLSCTLISVAR 453
Query: 410 LCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNV 469
L L FT C+IQD S +IG+ + +G+Y + V
Sbjct: 454 LLRELHCFAIFTDKVCVIQDRTSKMLIGVGTESNGVYHL----------------QRAEV 497
Query: 470 VATISCNSSSSIPSNALWHFRLGHLSHQRLHSM--SLLYPNIISSNNKDVCDLCHFAKHK 527
VAT S N + ALWH RLGH S + L S+ SL + SS+ K +CD+C AK
Sbjct: 498 VAT-SANVVKWKTNKALWHMRLGHPSSKVLSSVLPSLEDFDSCSSDLKTICDVCVRAKQT 556
Query: 528 HLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVS 587
F+ S + A F +H D+WGP AS G YFLTIVDDHSR +W+ L+ +K+EV+
Sbjct: 557 RASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHYFLTIVDDHSRAVWIHLMLAKSEVA 616
Query: 588 THVINFITMIQTQFHITPKFIRTDNGPEFM-LSTFYASHGIIHQKSCVETPQQNGRVERK 646
+ + FI M QF+ K +R++NG EFM L +++A GI+HQ SCV T QQNGRVERK
Sbjct: 617 SLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYFAERGIVHQISCVYTHQQNGRVERK 676
Query: 647 HQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLF 706
H+HILNV R+LLFQ++LP SFW ++L A +LINR PTPIL ++PY +L+ Q P+
Sbjct: 677 HRHILNVARSLLFQAELPISFWEESVLTAAYLINRTPTPILDGKTPYKILYSQPPSYASL 736
Query: 707 KVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETF 766
+VFG LC+A K Q R RK IF+GY G KG+ +YDI+S+ FVSR V F E
Sbjct: 737 RVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQKGWRIYDIESQIFFVSRDVVFQEDI 796
Query: 767 LPYPHTSLSTTPNWEYFSS-------------SNFSDV---SNQPTPINSPAIID--DIL 808
P+ + N + FSS F D+ + P PAIID D
Sbjct: 797 FPF-----ADKKNKDTFSSPAAVIPSPILPYDDEFLDIYQIGDVPATNPLPAIIDVNDSP 851
Query: 809 PPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDY------------VCNNIHTSPYP 856
P SP I P P P R RQ L+DY + +NI T YP
Sbjct: 852 PSSPIITATPAAASP---PPLRRGLRQRQENVRLKDYQTYSAQCESTQTLSDNIGTCIYP 908
Query: 857 INNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVD 916
+ NY+S S + F+ ++ P++Y +A + W+ A+ E+ ALE GTW +
Sbjct: 909 MANYVSGEIFSPSNQHFLAAISMVDPPQTYNQAIREKEWRNAVFFEVDALEDQGTWDITK 968
Query: 917 LPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLV 976
LP +K IG +W++++KY+++G++ER+KARLVA G +Q EG+D+ T++PV K+ T+RL+
Sbjct: 969 LPQGVKAIGSKWVFRIKYNSNGTVERYKARLVALGNHQKEGIDFTKTFAPVVKMQTVRLL 1028
Query: 977 IALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNKPNQVCKLQKSLYGLKQASR 1036
+ +++ +W LHQ+DV+NAFLHGDL+ED+YM PPG K+ P+ VCKL+KS+YGLKQA R
Sbjct: 1029 LDVAAAKDWELHQMDVHNAFLHGDLKEDIYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPR 1088
Query: 1037 KWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVL 1096
W+EKL++ L + Q+ D+SLF S ++VYVDD++I G ++ E K L
Sbjct: 1089 CWFEKLSTSLLKFGFTQSKKDYSLFTSIRGSKVLHVIVYVDDVVICGKAVRENNTSKLAL 1148
Query: 1097 DAS 1099
+S
Sbjct: 1149 GSS 1151
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 654 bits (1687), Expect = 0.0
Identities = 441/1429 (30%), Positives = 685/1429 (47%), Gaps = 152/1429 (10%)
Query: 5 LGTKNKLGFINGVIPIPDADDLN-------------RAAWERCNHLVQSWLINSVSDSIA 51
L ++ +GF+NG + P L +W + LV+SWL ++S+ +
Sbjct: 37 LSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCTDQLVRSWLFGTLSEEVL 96
Query: 52 QTIVFYDTAFEVWHDLQERFSKVDRIRIANLRSTINNLKQGSKSVLDYFTEMKALWEELA 111
+ T+ ++W L E F+K R +LR + L + K Y E K + + L+
Sbjct: 97 GHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQLLSKKEKPFSVYCREFKTICDALS 156
Query: 112 SHRPIPNCSCIHPCRCEASKVAKIHRNEDQIMQFLTGLNDQFSIVRTQV---LLLDPLPS 168
S + K +I FL GL + + T + L P P+
Sbjct: 157 S-------------------IGKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKLPTPT 197
Query: 169 LNKVYSLVVQEESNNASLS-SLSVSDDSSIQINASDVRKFQGRGKNPSQPKPTRLCTFSN 227
N V S V +S S + SV+ + I S+ Q NP+Q
Sbjct: 198 FNDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQ---YNPNQKG--------- 245
Query: 228 RTNHTVDFCYLKHGYPNVNKAQPRVNAVTHEDVDAGTSSSIGQGSSTSSNAGFSQEQLVQ 287
G NK G+G ++ GFSQ Q
Sbjct: 246 ------------RGRSGQNK---------------------GRGGYSTRGRGFSQHQSSP 272
Query: 288 LASLLQQANLVVPASSSSQAS-----SNHISANPLISTTISAPESSSAGIIPKPSYWLLD 342
S + + + + N+ A +T+ + + W D
Sbjct: 273 QVSGPRPVCQICGRTGHTALKCYNRFDNNYQAEIQAFSTLRVSDDTG-------KEWHPD 325
Query: 343 SGANEHISCNLSFFSSFYRIP-PVYVSLPNKTCVLVQYAGTVSFTSN---FYLSHVLYSP 398
S A H++ + + S V + + T + + + G+ + S+ L+ VL P
Sbjct: 326 SAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLNEVLVVP 385
Query: 399 AFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCSSNSV 458
+L+SV+KLC+ ++F + I D + K++ + +GLY N
Sbjct: 386 NIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVL------ENQE 439
Query: 459 FSSV-SHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRL-HSMSLLYPNIISSNNKD 516
F ++ S++ C + WH RLGH + + L H + I S
Sbjct: 440 FVALYSNRQCAATEEV-------------WHHRLGHANSKALQHLQNSKAIQINKSRTSP 486
Query: 517 VCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDHSRFLW 576
VC+ C K LPF S S + +H D+WGP + S G +Y+ VDD+SR+ W
Sbjct: 487 VCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSW 546
Query: 577 VILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFM---LSTFYASHGIIHQKSC 633
L +K+E + I+F +++ Q + K ++D G EF+ L T + HGI H+ SC
Sbjct: 547 FYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISC 606
Query: 634 VETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILHNQSPY 693
TPQQNG ERKH+H++ +G ++LF S P FW + A ++INR+P+ +L N SPY
Sbjct: 607 PYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPY 666
Query: 694 FVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLYDIQSRE 753
L + P + +VFG CY + K PR+ + +FLGY S +KG+ + + +
Sbjct: 667 EALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGK 726
Query: 754 IFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSNQPTPINSPAIIDDILPPSPP 813
+++SR+V F+E+ LP+ S P +S Q N I +I P+ P
Sbjct: 727 VYISRNVIFNESELPFKEKYQSLVPQ--------YSTPLLQAWQHNK---ISEISVPAAP 775
Query: 814 INPPPPPPIPVVSPASRTSTRQTTTPSYLQDYVCNNIHTSPYPINNYISHHNLSNNYS-- 871
+ P I + + A T Q T P + ++ +P + + N+++
Sbjct: 776 VQLFSKP-IDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQVINSHAMT 834
Query: 872 --------------SFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDL 917
+ + S T EPK+ A A KH W +A+ E+ + TW LV
Sbjct: 835 TRSKAGIQKPNTRYALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPP 894
Query: 918 PSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVI 977
++ + +W++K K H DGSI++ KARLVAKG++Q EG+DY +T+SPV + TIRLV+
Sbjct: 895 TDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVL 954
Query: 978 ALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPG-IKSNKPNQVCKLQKSLYGLKQASR 1036
+S+ W + QLDV+NAFLHG+LQE V+M P G I KP VC+L K++YGLKQA R
Sbjct: 955 DVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPR 1014
Query: 1037 KWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVL 1096
W++ ++ L + ++ + SD SLFV LL+YVDDI++ G + + L
Sbjct: 1015 AWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQAL 1074
Query: 1097 DASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKL 1156
F +KDLG +YFLGI++ G+ L Q Y D+L +G D P+ TP +L
Sbjct: 1075 KNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQ--QL 1132
Query: 1157 HQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYL 1216
+S +A+ +R L G+L YL TRPDI F + Q + PT + R+LRY+
Sbjct: 1133 DNLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYI 1192
Query: 1217 KGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSR 1276
KG G GL RNS++ L +SD+D AGC +TRRS +G C LG++LISW K+Q TVS
Sbjct: 1193 KGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSN 1252
Query: 1277 SSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHL 1336
SS+EAEYRAL A E+ WI +LL+D+ I +YCDN SA++++ANP H R+KH
Sbjct: 1253 SSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHF 1312
Query: 1337 EIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGL 1385
+ D H +RE+V G+++ +S+ Q+AD FTK+L + F L SK+G+
Sbjct: 1313 DTDYHYIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGV 1361
>At2g06840 putative retroelement pol polyprotein
Length = 1102
Score = 622 bits (1605), Expect = e-178
Identities = 419/1271 (32%), Positives = 626/1271 (48%), Gaps = 214/1271 (16%)
Query: 152 QFSIVRTQVLLLDPLPSLNKVYSLVVQEESNNASLSSLSVSDDSSIQINASDVRKFQGRG 211
+F+ +R+++ DPLPS N+VYS V++ + N S ++ +I + Q
Sbjct: 14 RFAPIRSKITDEDPLPSHNRVYSRVIRGQQNLDVARSKETTNSEAINFSVKTPSAPQVAA 73
Query: 212 KNPSQPKPTRLCTFSNRTNHTVDFCYLKHGYPN---VNKAQPRVNAVTHEDVDA------ 262
+P+ R CT +R H V C+L HG+P K RV++ E V
Sbjct: 74 VYAPKPRD-RSCTHCHRQGHDVTDCFLVHGFPEWYYEQKGGSRVSSDNREVVSRLENKPA 132
Query: 263 ---GTSSS---IGQGSSTSSNAGFSQ----EQLVQLASLLQQANLVVPASSSSQASSNHI 312
G SS G+G S+ A S +Q+ QL SLLQ + +++S +
Sbjct: 133 KREGRSSKGNGRGRGRVNSARAPLSSSNGSDQITQLISLLQ--------AQRPKSTSERL 184
Query: 313 SANPLISTTISAPESSSAGIIPKPSYWLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNK 372
S N ++ I +DSGA+ H++ + S + I P V+ P+
Sbjct: 185 SGNTCLTDVI------------------IDSGASHHMTGDCSILVDVFDIIPSAVTKPDG 226
Query: 373 TCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMS 432
T+ +S++ L VL+ P F LISV+KL + S
Sbjct: 227 KASCATKCVTLLLSSSYKLQDVLFVPDFDCTLISVSKLLKQTG--------------PFS 272
Query: 433 LKMIGLAKQLDGLYKYTPSSCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLG 492
+IG + + +Y +T V + +HK+ SS S S ALWH RLG
Sbjct: 273 RTLIGAGEVRERVYYFT-------GVLVASAHKT----------SSDSTSSGALWHRRLG 315
Query: 493 HLSHQRLHSMSLLYPNIISSNNKDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGP 552
H ST+F L
Sbjct: 316 --------------------------------------------HPSTSFLL-------- 323
Query: 553 LSIASVHGHRYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDN 612
S+ H L +D ++K + + + NF M QF + IR+DN
Sbjct: 324 -SLPECHQSSKDLGKIDSCDT-----CSRAKQTLPSLIRNFCAMADRQFRKPVRSIRSDN 377
Query: 613 GPEFMLST-FYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYA 671
G EFM T ++ HGI+H+ SCV+TPQQN RVERKH+HILNV R LFQ P
Sbjct: 378 GTEFMCHTSYFQEHGILHETSCVDTPQQNARVERKHRHILNVARTCLFQGNFP------- 430
Query: 672 ILHAVFLINRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARK 731
P+P+L ++PY VL + P+ ++ + FGCLCYA + K R+RK
Sbjct: 431 ----------TPSPVLKGKTPYEVLFGKQPSYDMLRTFGCLCYAHIRPRDKDKFASRSRK 480
Query: 732 SIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDV 791
IF+GY HET P H S+ T +++ V
Sbjct: 481 CIFIGYP------------------------HETATPNTHDSIDPTSTSSDENNTPPEPV 516
Query: 792 SNQ------PTPINSPAIIDDI-LPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQD 844
+ Q P+ I+SP I+ + S +N P + R P YL+D
Sbjct: 517 TPQAEQPHSPSSISSPHIVHNKGSVHSRHLNEDHDSSSPGLPELLGKGHRPKHPPVYLKD 576
Query: 845 YVCNNIHTSPYPINNYISHHNLSN----NYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQ 900
YV + +H+SP+ + +S N+S N+ +F+ ++ + E + + W AMQ
Sbjct: 577 YVAHKVHSSPHTSSPGLSDSNVSPTVSANHIAFMAAILDSNEQNHFKDDVLIKEWCDAMQ 636
Query: 901 VELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDY 960
E++ALE TW + DLP K I +W+YK+K+++DG++ERHKARLV G +Q EG+D+
Sbjct: 637 KEIEALEANHTWDVTDLPHGKKAISSKWVYKLKFNSDGTLERHKARLVVMGNHQKEGIDF 696
Query: 961 FDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNKPNQ 1020
+T++PVAK+TT+RL++A+++ +W + Q+DV+NAFLHGDL+
Sbjct: 697 KETFAPVAKMTTVRLLLAVAAAKDWDVFQMDVHNAFLHGDLE------------------ 738
Query: 1021 VCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDII 1080
Q+SLYGLKQA R W+ KL++ L + Q+ D+SLF + LVYVDD I
Sbjct: 739 ----QESLYGLKQAPRCWFAKLSTALRKLGFTQSYEDYSLFSLNRDGTVIHFLVYVDDFI 794
Query: 1081 IAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGT 1140
I G++L + K L F +KDLG+LKYFLG+EV+ G L Q+KY LD++ ++G
Sbjct: 795 IVGNNLKAIDHFKEHLHKCFHMKDLGKLKYFLGLEVSRGADGFCLSQQKYALDIINEAGL 854
Query: 1141 IDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQ 1200
+ KP + P + KL SSP + + YRRLV R +YL TRPD+++ LSQF+
Sbjct: 855 LGYKPSAVPMELHHKLGSISSPVFDNPAQYRRLVDRFIYLTITRPDLSYAVHILSQFMQT 914
Query: 1201 PTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLG 1260
P +AH A LR++RYLKG P +G+ + +++L + D+D+ C TRRS+S +LG
Sbjct: 915 PLEAHWHATLRLVRYLKGSPDQGILLRSDRALSLTAYCDSDYNPCPRTRRSLSAYVLYLG 974
Query: 1261 NSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSA 1320
++ ISW+TKKQ TVS SS+EAEYRA+A E++W+ L+ + + + +L+CD+Q+A
Sbjct: 975 DTPISWKTKKQDTVSSSSAEAEYRAMAYTLKEIKWLKALMTTLGVDHTQPILLFCDSQAA 1034
Query: 1321 LHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILL 1380
+HIAANPVFHERTKH+E DCH VR+ V ++ +S+ D TKAL F LL
Sbjct: 1035 IHIAANPVFHERTKHIEKDCHQVRDAVTDKVISTPHIST----TDLLTKALPRPTFERLL 1090
Query: 1381 SKMGLINIYQP 1391
S +G N P
Sbjct: 1091 STLGTCNYDLP 1101
>At4g27210 putative protein
Length = 1318
Score = 610 bits (1574), Expect = e-174
Identities = 370/1102 (33%), Positives = 558/1102 (50%), Gaps = 116/1102 (10%)
Query: 339 WLLDSGANEHISCNLSFFSSFYRIPPVY----VSLPNKTCVLVQYAGTVSFTSN---FYL 391
WL DS A H++ + S + P + + + + + + + G+ + S+ L
Sbjct: 177 WLPDSAATAHVTNSPR---SLQQSQPYHGTDAIMVDDGNYLPITHTGSTNLASSSGTVPL 233
Query: 392 SHVLYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPS 451
+ VL P+ T +L+S++KL + ++ F + D + K++ + DGLY
Sbjct: 234 TDVLVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLLMGSNRDGLYCLKDD 293
Query: 452 SCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSMSLLYPNIIS 511
F S +S S+ +WH RLGH Q L +
Sbjct: 294 K--QFQAFFSTRQRSA---------------SDEVWHRRLGHPHPQILQPL--------- 327
Query: 512 SNNKDVCDLCHFAKHKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVDDH 571
E +H D+WGP +I SV G RY+ +D +
Sbjct: 328 -------------------------------ERVHCDLWGPTTITSVQGFRYYAVFIDHY 356
Query: 572 SRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYA---SHGII 628
SRF W+ LK K++ + F +++ Q + D G EF+ F SHGI
Sbjct: 357 SRFSWIYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSHGIQ 416
Query: 629 HQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPILH 688
Q SC TPQQNG ERKH+H++ +G ++LFQS +P FW A A FLIN +PT L
Sbjct: 417 QQLSCPHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALK 476
Query: 689 NQ-SPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTLY 747
SPY L+ + P + FG C+ + K P + K +FLGY +KG+
Sbjct: 477 ESISPYEKLYDKKPDYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFLGYNEKYKGYRCL 536
Query: 748 DIQSREIFVSRHVTFHETFLPYPHTSLSTTPN--------WEYFSSSNFSDVSNQPTPIN 799
+ +++SRHV F E+ P+ HT P W S S S P+
Sbjct: 537 YPPTGRLYISRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPSTSTSPSS-R 595
Query: 800 SPAIIDDILPPSPPINPPPPP---PIPVVSPASRTSTRQTT------TPSYLQDYVCNNI 850
SP PP P P P PI VS AS +T+Q+ T + + ++
Sbjct: 596 SPLFTSADFPPLPQRKTPLLPTLVPISSVSHASNITTQQSPDFDSERTTDFDSASIGDSS 655
Query: 851 HTSPY-----------PINNYISHHN-------------LSNNYSSFVMSLHTTT--EPK 884
H+S +N + +H + +S +V H + EPK
Sbjct: 656 HSSQAGSDSEETIQQASVNVHQTHASTNVHPMVTRAKVGISKPNPRYVFLSHKVSYPEPK 715
Query: 885 SYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHK 944
+ A KH W AM E+ +T TW LV S++ +G +W+++ K HADG++ + K
Sbjct: 716 TVTAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHADGTLNKLK 775
Query: 945 ARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQED 1004
AR+VAKG+ Q EG+DY +TYSPV + T+RLV+ L++ NW + Q+DV NAFLHGDL+E
Sbjct: 776 ARIVAKGFLQEEGIDYLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAFLHGDLKET 835
Query: 1005 VYMLIPPG-IKSNKPNQVCKLQKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVK 1063
VYM P G + +KP+ VC L KS+YGLKQ+ R W++K ++ L + + SD SLF+
Sbjct: 836 VYMTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIY 895
Query: 1064 KTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGI 1123
+++ +LL+YVDD++I G+S T + + L+ F++ D+GQL YFLGI+V + G+
Sbjct: 896 AHNNNLILLLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQQNGL 955
Query: 1124 SLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTT 1183
+ Q+KY DLL + P+ TP + ++D +R + G+L YL T
Sbjct: 956 FMSQQKYAEDLLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLT 1015
Query: 1184 RPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWA 1243
RPDI F + Q + QPT + R+LRY+KG G+ + R+S LQ +SD+DW
Sbjct: 1016 RPDIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSDSDWG 1075
Query: 1244 GCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDI 1303
C TRRS+ G C F+G +L+SW +KK TVSRSS+EAEY++L+ A E+ W+ LL+++
Sbjct: 1076 NCKQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTLLREL 1135
Query: 1304 HISCPKLPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQV 1363
I P P L+CDN SA+++ ANP FH RTKH +ID H VRE+V L + + +Q+
Sbjct: 1136 RIPLPDTPELFCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPGSEQI 1195
Query: 1364 ADFFTKALLPKPFNILLSKMGL 1385
AD FTK+L + F L K+G+
Sbjct: 1196 ADIFTKSLPYEAFIHLRGKLGV 1217
>At3g60170 putative protein
Length = 1339
Score = 588 bits (1515), Expect = e-168
Identities = 359/1079 (33%), Positives = 556/1079 (51%), Gaps = 72/1079 (6%)
Query: 339 WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNFY---LSHVL 395
W LDSG + H++ + +FS V L N T + V G+V N + V
Sbjct: 300 WFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGVTQVIPEVY 359
Query: 396 YSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQL-DGLYK-YTPS-- 451
Y P +NL+S+ +L E GLA + DG K Y PS
Sbjct: 360 YVPELRNNLLSLGQLQER-----------------------GLAILIRDGTCKVYHPSKG 396
Query: 452 -----SCSSNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRL----HSM 502
+ S N +F ++ K + N LWH R GHL+ + L H
Sbjct: 397 AIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMD-KENHLWHCRFGHLNQEGLKLLAHKK 455
Query: 503 SLLYPNIISSNNKDVCDLCHFAK-HKHLPFNSSISHASTNFELLHLDIWGPLSIASVHGH 561
++ I+ + K++C +C K H+ + +ST +L+H DI GP++ S G
Sbjct: 456 MVIGLPILKAT-KEICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGK 514
Query: 562 RYFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFM---L 618
RY L+ +DD +R WV L K+E F ++ + +RTD G EF
Sbjct: 515 RYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEF 574
Query: 619 STFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFL 678
F SHGI Q + TPQQNG ERK++ I+N R++L + ++P FWS A +V +
Sbjct: 575 GEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHI 634
Query: 679 INRVPTPILHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYK 738
NR PT + +P + P + F+VFGC+ Y R+KL +++K +FLG
Sbjct: 635 QNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVS 694
Query: 739 SGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVSN----Q 794
K + LYD ++I +S+ V F E + + D N +
Sbjct: 695 EESKAWRLYDPVMKKIVISKDVVFDED-KSWDWDQADVEAKEVTLECGDEDDEKNSEVVE 753
Query: 795 PTPINSPAII--DDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDYVCNNIHT 852
P + SP + D+ + SP + P P P PV + TR+ P ++ DY
Sbjct: 754 PIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKV----TRERRPPGWMADYETGE--- 806
Query: 853 SPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTW 912
+ N S ++ + T +P + +A K W++AM+ E++++ K TW
Sbjct: 807 ----------GEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTW 856
Query: 913 QLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTT 972
+L LP PIG +W+YK K + DG ++++KARLVAKGY Q G+DY + ++PVA+L T
Sbjct: 857 ELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDT 916
Query: 973 IRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPG-IKSNKPNQVCKLQKSLYGL 1031
+R ++A+SS NW + QLDV +AFLHG+L+E+VY+ P G I+ + +V KL+K+LYGL
Sbjct: 917 VRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGL 976
Query: 1032 KQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTY 1091
KQA R WY ++ + + + S+H+LF K + I+ +YVDD+I G
Sbjct: 977 KQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDE 1036
Query: 1092 IKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSD 1151
K + F++ DLG++K+FLGIEV S GI +CQR+Y ++LA G +S V P
Sbjct: 1037 FKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPIV 1096
Query: 1152 SSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALR 1211
KL +D + D +++LVG L+YL TRPD+ + +S+F+S P +H AA R
Sbjct: 1097 PGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKR 1156
Query: 1212 VLRYLKGCPGRGLFFPR--NSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTK 1269
+LRYLKG G+F+ R N S+ L F+D+D+AG L+ RRS SG F + + I W +K
Sbjct: 1157 ILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASK 1216
Query: 1270 KQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVF 1329
KQ V+ S++EAEY A A C+ W+ +L+ + V+ CDN S + ++ +PV
Sbjct: 1217 KQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPVL 1276
Query: 1330 HERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGLINI 1388
H ++KH+E+ H +R+ V ++KL ++DQVAD FTK L + F L + +G++N+
Sbjct: 1277 HGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRALLGMVNM 1335
Score = 30.8 bits (68), Expect = 5.7
Identities = 18/61 (29%), Positives = 33/61 (53%), Gaps = 4/61 (6%)
Query: 298 VVPASSSSQASSNHISANPLISTTISAPESSSAGII--PKPSYWLLD--SGANEHISCNL 353
+ AS + S N++S++P+++ + AP +A + +P W+ D +G E I NL
Sbjct: 755 IAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETGEGEEIEENL 814
Query: 354 S 354
S
Sbjct: 815 S 815
>At4g10990 putative retrotransposon polyprotein
Length = 1203
Score = 578 bits (1490), Expect = e-165
Identities = 333/829 (40%), Positives = 475/829 (57%), Gaps = 78/829 (9%)
Query: 563 YFLTIVDDHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFY 622
YFLT+VDD +R WV ++K+K+EVS F+ +I TQ++ K IR+DN E + F
Sbjct: 252 YFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELAFTKFV 311
Query: 623 ASHGIIHQKSCVETPQQNGRVER------------KHQHILNVGRALLFQSKLPPSFWSY 670
G+IHQ SC TPQQN VER H +++ R ++F P S
Sbjct: 312 KEQGMIHQFSCAYTPQQNSVVERYPSGYKGYKVLDLESHSISITRNVVFHETKFPFKTSK 371
Query: 671 AILHAVFLINRVPTPILHNQSP-YFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRA 729
+ +V + P IL +P +FV +P + + S S + + P
Sbjct: 372 FLKESV---DMFPNSILPLPAPLHFV--ESMPLDDDLRADDNNASTSNSASSASSIPP-- 424
Query: 730 RKSIFLGYKSGFKGFTLYDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFS 789
L + DI + + ++R P + + ++
Sbjct: 425 -----LPSTVNTQNTDALDIDTNSVPIAR-----------PKRNAKAPAYLSEYHCNSVP 468
Query: 790 DVSNQPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDYVCNN 849
+S+ SP I PS I PP I P S + TP + Y+C
Sbjct: 469 FLSSL-----SPTTSTSIETPSSSI---PPKKITTPYPMSTAISYDKLTPLF-HSYIC-- 517
Query: 850 IHTSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKT 909
+ + TEPK++ +A K + W +A EL ALE+
Sbjct: 518 --------------------------AYNVETEPKAFTQAMKSEKWTRAANEELHALEQN 551
Query: 910 GTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAK 969
TW + L +GC+W++ +KY+ DGSIER+KARLVA+G+ Q EG+DY +T+SPVAK
Sbjct: 552 KTWIVESLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAK 611
Query: 970 LTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIK-----SNKPNQVCKL 1024
+++L++ L++ W L Q+DV+NAFLHG+L E++YM +P G S VC+L
Sbjct: 612 FGSVKLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRL 671
Query: 1025 QKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGD 1084
KSLYGLKQASR+WY++L+SV ++IQ+ +D+++FVK + +S ++LVYVDD++IA +
Sbjct: 672 LKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASN 731
Query: 1085 SLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSK 1144
+ +K +L + FKIKDLG ++FLG+E+A S GIS+CQRKY +LL D G K
Sbjct: 732 DSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCK 791
Query: 1145 PVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQA 1204
P S P D ++ L ++ + SYR LVGRLLYL TRPDITF LSQFLS PT
Sbjct: 792 PSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDI 851
Query: 1205 HHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLI 1264
H AA +VLRYLKG PG+GL + +S + L GFSDADW C D+RRS++G C +LG SLI
Sbjct: 852 HMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLI 911
Query: 1265 SWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIA 1324
+W++KKQ VSRSS+E+EYR+LA ATCE+ W+ LL+D+H++ L+CDN+SALH+A
Sbjct: 912 TWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLA 971
Query: 1325 ANPVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKALLP 1373
NPVFHERTKH+EIDCH VR++++AG LK L V + +Q+AD TK L P
Sbjct: 972 TNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHP 1020
Score = 93.2 bits (230), Expect = 9e-19
Identities = 78/272 (28%), Positives = 120/272 (43%), Gaps = 52/272 (19%)
Query: 268 IGQGSSTSSNAGFSQEQLVQLASLLQ-QANLVVPASSSSQASS-------NHISANPLIS 319
+ G + + SQ+Q+ L S Q + PA++S SS + + A S
Sbjct: 4 VTSGGNNLNLQDLSQDQIQHLISQFNAQVRVQEPAATSIYTSSPTATITEHGLMAQTSTS 63
Query: 320 TTISAPESS----------------SAGIIPKPSYWLLDSGANEHISCNLSFFSSFYRIP 363
TI P +S S + W++DSGA+ H+ +L+ F +
Sbjct: 64 GTIPFPSTSLKYENNNLTFQNHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFRELIHVS 123
Query: 364 PVYVSLPNKTCVLVQYAGTVSFTSNFYLSHVLYSPAFTHNLISVAKLCESLSYSLHFTSA 423
V V+LPN T V + + GT+ TS L +VL P F NLISV L ++LSYS HF +
Sbjct: 124 GVTVTLPNGTRVAITHTGTICITSTLILHNVLLVPDFKFNLISVCCLVKTLSYSAHFFAD 183
Query: 424 HCIIQDTMSLKMIGLAKQLDGLY-------KYTPSSCSSNSVFSSVSHKSCNVVATISCN 476
C IQ+ MIG K + LY ++PS +++S F+ C
Sbjct: 184 CCYIQELTRGLMIGRGKTYNNLYILETQRTSFSPSLPAASS-FTGTVQDDC--------- 233
Query: 477 SSSSIPSNALWHFRLG---HLSHQRLHSMSLL 505
LWH RLG +L ++ L+ ++L+
Sbjct: 234 --------LLWHQRLGIRHYLHYRNLYFLTLV 257
>At3g25450 hypothetical protein
Length = 1343
Score = 573 bits (1478), Expect = e-163
Identities = 363/1065 (34%), Positives = 554/1065 (51%), Gaps = 79/1065 (7%)
Query: 339 WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFTSNF----YLSHV 394
W LD+GA+ H++ N ++F + V + +C+ ++ G++ F S L V
Sbjct: 292 WYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDV 351
Query: 395 LYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCS 454
Y P N++S+ + ES + + + D +I + + LYK
Sbjct: 352 YYIPDLKSNILSLGQATES-GCDIRMREDYLTLHDREGNLLIKAQRSRNRLYK------- 403
Query: 455 SNSVFSSVSHKSCNVVATISCNSSSSIPSNALWHFRLGHLSHQRLHSM--SLLYPNIISS 512
V V + C + T + + +WH RLGH+S + + +M L I SS
Sbjct: 404 ---VSLEVENSKCLQLTTTN--------ESTIWHARLGHISFETIKAMIKKELVIGISSS 452
Query: 513 --NNKDVCDLCHFAKHKHLPFNSSISH-ASTNFELLHLDIWGPLSIASVHGHRYFLTIVD 569
K+ C C F K F + S+ A+ EL+H D+ GP+S ++ RY ++D
Sbjct: 453 VPQEKETCGSCLFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLID 512
Query: 570 DHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFM---LSTFYASHG 626
DHSR++W ILLK K+E F +++ + K RTD G EF+ F A G
Sbjct: 513 DHSRYMWSILLKEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEG 572
Query: 627 IIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPI 686
I + TPQQNG VER+++ +L + R++L +P W A+ H+ +LINRV T
Sbjct: 573 INRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRS 632
Query: 687 LHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTL 746
L NQ+PY V H+ P + +VFGC+ YA + KL R+R ++LG + G K + L
Sbjct: 633 LSNQTPYEVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRL 692
Query: 747 YDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWE---YFSSSNF-------SDVSNQP- 795
D R IFVSR V F E S S T + S F +D+S +P
Sbjct: 693 LDPTKRRIFVSRDVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPE 752
Query: 796 ----TPIN--SPAIIDDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDYV-CN 848
IN II++ + P P+ R S RQ P+YL+DYV C
Sbjct: 753 ETEEAEINGEDENIIEEAETEEHDQSQEEPQPV-------RRSQRQVIRPNYLKDYVLCA 805
Query: 849 NIHTSPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEK 908
I + H L L EP + EA+K W+ A + E+Q++EK
Sbjct: 806 EIE----------AEHLL----------LAVNDEPWDFKEANKSKEWRDACKEEIQSIEK 845
Query: 909 TGTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVA 968
TW LVDLP K IG +W++K+K+++DGSI ++KARLVAKGY Q G+D+ + ++PVA
Sbjct: 846 NRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVA 905
Query: 969 KLTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNKPNQ-VCKLQKS 1027
++ T+RL+IAL++ + W +H LDV AFLHG+L+EDVY+ P G + + + V KL K+
Sbjct: 906 RIETVRLIIALAASNGWEIHHLDVKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKA 965
Query: 1028 LYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLT 1087
LYGL+QA R W KL +L + + + SL+ K+ + ++ VYVDD+++ G +L
Sbjct: 966 LYGLRQAPRAWNTKLNEILKELKFEKCHKEPSLYRKQEGENILVVAVYVDDLLVTGSNLD 1025
Query: 1088 EFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVS 1147
K + F++ DLG+L Y+LGIEV SK GI+L Q +Y +L ++G V+
Sbjct: 1026 IILNFKKGMVGKFEMSDLGKLTYYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVN 1085
Query: 1148 TPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHT 1207
TP +S++L + D YRR +G L YL TRPD+++ LS++L +P ++H
Sbjct: 1086 TPMIASLELSKAQDEKRIDETDYRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGA 1145
Query: 1208 AALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWR 1267
A ++LRYL+G GL+F + + L G+SD+ LD +S G F+L + I+W
Sbjct: 1146 ALKQILRYLQGTTSHGLYFKKGENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWC 1205
Query: 1268 TKKQITVSRSSSEAEYRALASATCELQWILYLLQD-IHISCPKLPVLYCDNQSALHIAAN 1326
++KQ V+ SS EAE+ A A + W+ LL + I C K+ + DN+SA+ + N
Sbjct: 1206 SQKQQVVTLSSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKV-TIRVDNKSAIALTKN 1264
Query: 1327 PVFHERTKHLEIDCHIVREKVQAGILKLLPVSSQDQVADFFTKAL 1371
PVFH R+KH+ H +RE V+ G +++ V Q AD TKAL
Sbjct: 1265 PVFHGRSKHIHRRYHFIRECVENGQIEVEHVPGVRQKADILTKAL 1309
>At3g61330 copia-type polyprotein
Length = 1352
Score = 568 bits (1463), Expect = e-161
Identities = 345/1067 (32%), Positives = 552/1067 (51%), Gaps = 80/1067 (7%)
Query: 339 WLLDSGANEHISCNLSFFSSFYRIPPVYVSLPNKTCVLVQYAGTVSFT----SNFYLSHV 394
W LDSGA+ H+ S F+ V+L +++ + V+ G + + ++S+V
Sbjct: 335 WYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNV 394
Query: 395 LYSPAFTHNLISVAKLCESLSYSLHFTSAHCIIQDTMSLKMIGLAKQLDGLYKYTPSSCS 454
Y P+ N++S+ +L E Y + + I+D S + T S
Sbjct: 395 YYIPSMKTNILSLGQLLEK-GYDIRLKDNNLSIRDQESNLI-------------TKVPMS 440
Query: 455 SNSVFSSVSHKSCNVVATIS-CNSSSSIPSNALWHFRLGHLSHQRLHSMS---LLYPNII 510
N +F N+ I+ C + LWH R GHL+ L +S ++
Sbjct: 441 KNRMFV------LNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPC 494
Query: 511 SSNNKDVCDLCHFAKHKHLPF-NSSISHASTNFELLHLDIWGPLSIASVHGHRYFLTIVD 569
++ VC+ C K + F S S A EL+H D+ GP+ S+ YFL +D
Sbjct: 495 INHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFID 554
Query: 570 DHSRFLWVILLKSKAEVSTHVINFITMIQTQFHITPKFIRTDNGPEFMLSTFYA---SHG 626
D SR WV LK K+EV F ++ + + K +R+D G EF F +G
Sbjct: 555 DFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNG 614
Query: 627 IIHQKSCVETPQQNGRVERKHQHILNVGRALLFQSKLPPSFWSYAILHAVFLINRVPTPI 686
I Q + +PQQNG VERK++ IL + R++L +LP W+ A+ AV+L+NR PT
Sbjct: 615 IRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKS 674
Query: 687 LHNQSPYFVLHHQLPALNLFKVFGCLCYASTLQSHRTKLQPRARKSIFLGYKSGFKGFTL 746
+ ++P + P ++ +VFG + +A R+KL ++ K IF+GY + KG+ L
Sbjct: 675 VSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKL 734
Query: 747 YDIQSREIFVSRHVTFHETFLPYPHTSLSTTPNWEYFSSSNFSDVS-------NQPTPIN 799
Y+ +++ +SR++ F E W++ +SN D + ++P P
Sbjct: 735 YNPDTKKTIISRNIVFDEE------------GEWDW--NSNEEDYNFFPHFEEDEPEPTR 780
Query: 800 SPAIIDDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDYVCNNIHTSPYPINN 859
PPS P PP P S +S+ +T +Q+
Sbjct: 781 EE-------PPSE--EPTTPPTSPTSSQIEESSSERTPRFRSIQEL-------------- 817
Query: 860 YISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKTGTWQLVDLPS 919
+ N + + L EP + +A + W+ AM E+++++K TW+L LP+
Sbjct: 818 ---YEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPN 874
Query: 920 NIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAKLTTIRLVIAL 979
K IG +W+YK K ++ G +ER+KARLVAKGY+Q G+DY + ++PVA+L T+RL+I+L
Sbjct: 875 GHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISL 934
Query: 980 SSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPG-IKSNKPNQVCKLQKSLYGLKQASRKW 1038
++ + W +HQ+DV +AFL+GDL+E+VY+ P G I + ++V +L+K LYGLKQA R W
Sbjct: 935 AAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 994
Query: 1039 YEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGDSLTEFTYIKSVLDA 1098
++ +I+ +H+L++K I +YVDD+I G++ + F K +
Sbjct: 995 NTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTK 1054
Query: 1099 SFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSKPVSTPSDSSIKLHQ 1158
F++ D+G + Y+LGIEV GI + Q Y ++L DS PV TP + IKL +
Sbjct: 1055 EFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSK 1114
Query: 1159 DSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQAHHTAALRVLRYLKG 1218
D +++ LVG L YL TRPDI + +S+++ PT H AA R+LRY+KG
Sbjct: 1115 KEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKG 1174
Query: 1219 CPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQITVSRSS 1278
GL + S L G+SD+DW G +D R+S SG F++G++ +W +KKQ V+ S+
Sbjct: 1175 TVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLST 1234
Query: 1279 SEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIAANPVFHERTKHLEI 1338
EAEY A S C W+ LL+++ + + ++ DN+SA+ +A NPVFH+R+KH++
Sbjct: 1235 CEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDT 1294
Query: 1339 DCHIVREKVQAGILKLLPVSSQDQVADFFTKALLPKPFNILLSKMGL 1385
H +RE V ++L V + DQVADFFTK L + F + S +G+
Sbjct: 1295 RYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341
>At4g23160 putative protein
Length = 1240
Score = 548 bits (1412), Expect = e-156
Identities = 269/562 (47%), Positives = 385/562 (67%), Gaps = 15/562 (2%)
Query: 791 VSNQPTPINSPAIIDDILPPSPPINPPPPPPIPVVSPASRTSTRQTTTPSYLQDYVCNNI 850
VS+ +S +I DI+P + N P P + TS R+T P+YLQDY C+++
Sbjct: 2 VSDADASTSSSSI--DIMPSANIQNDVPEPSV-------HTSHRRTRKPAYLQDYYCHSV 52
Query: 851 HT-SPYPINNYISHHNLSNNYSSFVMSLHTTTEPKSYAEASKHDCWKQAMQVELQALEKT 909
+ + + I+ ++S+ +S Y SF++ + EP +Y EA + W AM E+ A+E T
Sbjct: 53 ASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETT 112
Query: 910 GTWQLVDLPSNIKPIGCRWIYKVKYHADGSIERHKARLVAKGYNQIEGLDYFDTYSPVAK 969
TW++ LP N KPIGC+W+YK+KY++DG+IER+KARLVAKGY Q EG+D+ +T+SPV K
Sbjct: 113 HTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCK 172
Query: 970 LTTIRLVIALSSIHNWHLHQLDVNNAFLHGDLQEDVYMLIPPGIKSNK-----PNQVCKL 1024
LT+++L++A+S+I+N+ LHQLD++NAFL+GDL E++YM +PPG + + PN VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 1025 QKSLYGLKQASRKWYEKLTSVLSHHHYIQASSDHSLFVKKTSSSFTILLVYVDDIIIAGD 1084
+KS+YGLKQASR+W+ K + L ++Q+ SDH+ F+K T++ F +LVYVDDIII +
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292
Query: 1085 SLTEFTYIKSVLDASFKIKDLGQLKYFLGIEVAHSKLGISLCQRKYCLDLLADSGTIDSK 1144
+ +KS L + FK++DLG LKYFLG+E+A S GI++CQRKY LDLL ++G + K
Sbjct: 293 NDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCK 352
Query: 1145 PVSTPSDSSIKLHQDSSPSYADIPSYRRLVGRLLYLNTTRPDITFITQQLSQFLSQPTQA 1204
P S P D S+ S + D +YRRL+GRL+YL TR DI+F +LSQF P A
Sbjct: 353 PSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLA 412
Query: 1205 HHTAALRVLRYLKGCPGRGLFFPRNSSINLQGFSDADWAGCLDTRRSISGQCFFLGNSLI 1264
H A +++L Y+KG G+GLF+ + + LQ FSDA + C DTRRS +G C FLG SLI
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 1265 SWRTKKQITVSRSSSEAEYRALASATCELQWILYLLQDIHISCPKLPVLYCDNQSALHIA 1324
SW++KKQ VS+SS+EAEYRAL+ AT E+ W+ +++ + K +L+CDN +A+HIA
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIA 532
Query: 1325 ANPVFHERTKHLEIDCHIVREK 1346
N VFHERTKH+E DCH VRE+
Sbjct: 533 TNAVFHERTKHIESDCHSVRER 554
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,020,104
Number of Sequences: 26719
Number of extensions: 1441835
Number of successful extensions: 11609
Number of sequences better than 10.0: 329
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 6752
Number of HSP's gapped (non-prelim): 1789
length of query: 1391
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1279
effective length of database: 8,326,068
effective search space: 10649040972
effective search space used: 10649040972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Medicago: description of AC149471.17