BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149305.10 + phase: 0 /pseudo
         (55 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g15490 UDP-glucose dehydrogenase-like protein                       73  2e-14
At5g39320 UDP-glucose dehydrogenase-like protein                       72  7e-14
At3g29360 UDP-glucose dehydrogenase, putative                          69  3e-13
At1g26570 UDP-glucose dehydrogenase like protein                       68  8e-13
At1g31990 hypothetical protein                                         28  1.1
At2g35110 unknown protein                                              27  2.5

>At5g15490 UDP-glucose dehydrogenase-like protein
          Length = 480

 Score = 73.2 bits (178), Expect = 2e-14
 Identities = 35/55 (63%), Positives = 42/55 (75%)

Query: 1  MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
          MA IALK  S +V VVDI+  RI AW +DQ+PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPSVEVAVVDISVPRINAWNSDQLPIYEPGLDDVVKQCRGKNLFFSTD 71


>At5g39320 UDP-glucose dehydrogenase-like protein
          Length = 480

 Score = 71.6 bits (174), Expect = 7e-14
 Identities = 34/55 (61%), Positives = 41/55 (73%)

Query: 1  MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
          MA IALK    +V VVDI+  RI AW +DQ+PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQCRGKNLFFSTD 71


>At3g29360 UDP-glucose dehydrogenase, putative
          Length = 480

 Score = 69.3 bits (168), Expect = 3e-13
 Identities = 33/55 (60%), Positives = 40/55 (72%)

Query: 1  MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
          MA IALK    +V VVDI+  RI AW +D +PIY+PG D +VKQCR KNLFF T+
Sbjct: 17 MAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTD 71


>At1g26570 UDP-glucose dehydrogenase like protein
          Length = 481

 Score = 68.2 bits (165), Expect = 8e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%)

Query: 1  MAAIALKFTSTDVTVVDITKSRIVAWYNDQIPIYQPGFDGLVKQCRIKNLFFGTN 55
          MA +ALK    +V VVDI++ RI AW +D++PIY+PG + +VKQCR KNLFF T+
Sbjct: 17 MAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQCRGKNLFFSTD 71


>At1g31990 hypothetical protein
          Length = 140

 Score = 27.7 bits (60), Expect = 1.1
 Identities = 14/36 (38%), Positives = 19/36 (51%), Gaps = 7/36 (19%)

Query: 26 WYNDQIPIYQPGF-------DGLVKQCRIKNLFFGT 54
          WY D I I+ PG        +G +K+C I+ LF  T
Sbjct: 15 WYGDVIWIFDPGIIGAQIDNEGDLKKCFIQTLFHST 50


>At2g35110 unknown protein
          Length = 1339

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 9/30 (30%), Positives = 20/30 (66%)

Query: 6   LKFTSTDVTVVDITKSRIVAWYNDQIPIYQ 35
           L+ TS D+ +V + ++ +V  + D++ +YQ
Sbjct: 282 LRVTSIDIALVVLKENLVVTLFRDEVSLYQ 311


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.326    0.140    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,138,299
Number of Sequences: 26719
Number of extensions: 32024
Number of successful extensions: 73
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 68
Number of HSP's gapped (non-prelim): 6
length of query: 55
length of database: 11,318,596
effective HSP length: 31
effective length of query: 24
effective length of database: 10,490,307
effective search space: 251767368
effective search space used: 251767368
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.6 bits)