BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149207.4 - phase: 0
(168 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g47300 putative protein 49 1e-06
At3g17480 hypothetical protein 47 4e-06
At3g25460 hypothetical protein 47 5e-06
At3g22720 hypothetical protein 46 8e-06
At3g22700 hypothetical protein 45 2e-05
At2g27520 hypothetical protein 45 2e-05
At3g17270 hypothetical protein 45 2e-05
At1g11620 hypothetical protein 44 3e-05
At3g22350 hypothetical protein 44 4e-05
At2g30280 unknown protein 44 4e-05
At1g12850 unknown protein 44 4e-05
At3g22710 hypothetical protein 43 7e-05
At3g21410 hypothetical protein 43 7e-05
At3g17570 hypothetical protein 43 7e-05
At1g51290 hypothetical protein 43 7e-05
At3g21120 hypothetical protein 43 9e-05
At3g10430 hypothetical protein 43 9e-05
At1g51320 hypothetical protein 43 9e-05
At3g24700 hypothetical protein 42 2e-04
At3g19410 hypothetical protein 42 2e-04
>At5g47300 putative protein
Length = 416
Score = 49.3 bits (116), Expect = 1e-06
Identities = 29/71 (40%), Positives = 41/71 (56%), Gaps = 1/71 (1%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADITDL-LSTATEH 72
LP +L+ EIL RV + + QLRS CK W +L + +F +KHL K+ D +L LS +
Sbjct: 46 LPGDLLEEILCRVPATSLKQLRSTCKQWNNLFNNGRFTRKHLDKAPKDFQNLMLSDSRVF 105
Query: 73 RKSFVSHQIPN 83
S H IP+
Sbjct: 106 SMSVSFHGIPS 116
>At3g17480 hypothetical protein
Length = 373
Score = 47.4 bits (111), Expect = 4e-06
Identities = 20/58 (34%), Positives = 39/58 (66%)
Query: 9 SPTTILPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADITDLL 66
SP ++L +L+ +IL+RV + + ++LRS CK W +++ D +F++KH + + D+L
Sbjct: 6 SPMSVLTEDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDML 63
>At3g25460 hypothetical protein
Length = 361
Score = 47.0 bits (110), Expect = 5e-06
Identities = 21/45 (46%), Positives = 29/45 (63%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKS 58
LP +L++EIL RV + + +LRS CK W L D +F KH HK+
Sbjct: 6 LPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKA 50
>At3g22720 hypothetical protein
Length = 378
Score = 46.2 bits (108), Expect = 8e-06
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKS 58
LP++L+ +IL+RV + + +LRS C+ W +L+ D +F +KH HK+
Sbjct: 4 LPLDLVEKILSRVPATSLKRLRSTCRRWNALLKDRRFTEKHFHKA 48
>At3g22700 hypothetical protein
Length = 338
Score = 45.1 bits (105), Expect = 2e-05
Identities = 19/45 (42%), Positives = 32/45 (70%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKS 58
LP++L+ EIL+RV + + +LRS C+ W +L+ D +F +KH K+
Sbjct: 4 LPLDLVEEILSRVPATSLKRLRSTCRQWNALLKDRRFTEKHFRKA 48
>At2g27520 hypothetical protein
Length = 347
Score = 45.1 bits (105), Expect = 2e-05
Identities = 25/74 (33%), Positives = 42/74 (55%), Gaps = 1/74 (1%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSL-ADITDLLSTATEH 72
LP +L+ EIL+R+ + + +LR CK W +L D +F+ K HK+ D+ +LS +
Sbjct: 6 LPWDLVDEILSRLPATSLGRLRFTCKRWNALFKDPEFITKQFHKAAKQDLVLMLSNFGVY 65
Query: 73 RKSFVSHQIPNQLQ 86
S +IPN ++
Sbjct: 66 SMSTNLKEIPNNIE 79
>At3g17270 hypothetical protein
Length = 134
Score = 44.7 bits (104), Expect = 2e-05
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 11 TTI--LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADITDLLST 68
TTI LP EL EIL+RV + + + +++CK W +L D +FV+K+L KS ++ LL
Sbjct: 2 TTIPNLPDELESEILSRVPAKSLAKWKTICKRWYALFRDPRFVKKNLCKSAREVM-LLMN 60
Query: 69 ATEHRKSFVSHQIPNQLQEEEEEDDD----DDDDDEEVDEEEAAKRARMNRLAEL 119
H S H I ++ + E D D +V +E R+ A+L
Sbjct: 61 DRVHSISVNRHGIDDRFEPSMEFSGKLRSLIDSKDVKVSKEANLARSLNTMYAKL 115
>At1g11620 hypothetical protein
Length = 363
Score = 44.3 bits (103), Expect = 3e-05
Identities = 20/45 (44%), Positives = 32/45 (70%)
Query: 11 TTILPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHL 55
T L +L+ EIL+RV + + ++LRS CK W++L+ + +FV KHL
Sbjct: 3 TMDLSSDLVEEILSRVPARSLVRLRSTCKQWEALIAEPRFVNKHL 47
>At3g22350 hypothetical protein
Length = 378
Score = 43.9 bits (102), Expect = 4e-05
Identities = 20/43 (46%), Positives = 28/43 (64%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLH 56
LP++L+ EIL+RV + + +LRS CK W +L F QKH H
Sbjct: 4 LPLDLVEEILSRVSATSLKRLRSTCKQWNTLFKKRSFSQKHFH 46
>At2g30280 unknown protein
Length = 346
Score = 43.9 bits (102), Expect = 4e-05
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 14/54 (25%)
Query: 67 STATEHRKSFVSHQIPNQLQEEEEEDDDDDDDDE----------EVDEEEAAKR 110
S A +H K+ P + +EEEEEDDDDDDDDE E D+EE +KR
Sbjct: 267 SNAEDHPKT----DYPEEEEEEEEEDDDDDDDDESEEEKSEASDESDDEETSKR 316
Score = 34.7 bits (78), Expect = 0.025
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 87 EEEEEDDDDDDDDEEVDEEEAAKRARMNRLAELDNLLVGVRSI 129
EEEEE++++DDDD++ DE E K + + + VRS+
Sbjct: 279 EEEEEEEEEDDDDDDDDESEEEKSEASDESDDEETSKRHVRSV 321
Score = 34.7 bits (78), Expect = 0.025
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 86 QEEEEEDDDDDDDDEEVDEEEAAKRA 111
+EEEEE+++DDDDD++ + EE A
Sbjct: 279 EEEEEEEEEDDDDDDDDESEEEKSEA 304
>At1g12850 unknown protein
Length = 405
Score = 43.9 bits (102), Expect = 4e-05
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 78 SHQIPNQLQEEEEEDDDDDDDDEEVDEEEAAKRARMN-RLAELDNLLV 124
S Q L EEEEE+D+ + + EEV+EEE + +N R ELDNLLV
Sbjct: 3 SSQSSQLLDEEEEEEDEAESEGEEVEEEEDEAESELNNRRIELDNLLV 50
>At3g22710 hypothetical protein
Length = 326
Score = 43.1 bits (100), Expect = 7e-05
Identities = 22/60 (36%), Positives = 35/60 (57%), Gaps = 2/60 (3%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADITDLLSTATEHR 73
LP +L+ EIL+RV + + +LRS C W ++ D++F +KH K A ++ EHR
Sbjct: 6 LPPDLVEEILSRVPATSVKKLRSTCTQWNAIFKDERFTEKHFSK--APKESMVLMLKEHR 63
>At3g21410 hypothetical protein
Length = 374
Score = 43.1 bits (100), Expect = 7e-05
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 12 TILPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHL 55
++LP EL EIL RV + + L+L+ CK W +L D +F+ KHL
Sbjct: 9 SLLPFELFEEILCRVPTKSLLRLKLTCKRWLALFNDKRFIYKHL 52
>At3g17570 hypothetical protein
Length = 381
Score = 43.1 bits (100), Expect = 7e-05
Identities = 20/56 (35%), Positives = 36/56 (63%)
Query: 12 TILPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADITDLLS 67
T LP +L EIL+RV + + +L+ CK W +L D +F++KH+ ++ ++ L+S
Sbjct: 3 TDLPRDLETEILSRVPATSLQKLKPTCKRWYTLFKDPEFLKKHVGRAEREVISLMS 58
>At1g51290 hypothetical protein
Length = 377
Score = 43.1 bits (100), Expect = 7e-05
Identities = 22/45 (48%), Positives = 29/45 (63%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKS 58
LP EL+ EIL RV + + R+VCK W SL D++FV HL +S
Sbjct: 6 LPWELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVNDHLVRS 50
>At3g21120 hypothetical protein
Length = 367
Score = 42.7 bits (99), Expect = 9e-05
Identities = 18/41 (43%), Positives = 29/41 (69%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKH 54
LP +L++EIL++V + + + RS C+ W +LVVD F +KH
Sbjct: 3 LPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKH 43
>At3g10430 hypothetical protein
Length = 370
Score = 42.7 bits (99), Expect = 9e-05
Identities = 28/91 (30%), Positives = 47/91 (50%), Gaps = 26/91 (28%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDD-QFVQKHLHKS-------------- 58
LP +L++EIL R + + L+ +S CK W L+ +D +F+ KHL KS
Sbjct: 5 LPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKRFLRIENRERVQ 64
Query: 59 -LADITDLLSTATEHRKSFVSHQIPNQLQEE 88
L +T++L+ +T IPN+L+ +
Sbjct: 65 ILDPVTEILAVST----------IPNELRHK 85
>At1g51320 hypothetical protein
Length = 375
Score = 42.7 bits (99), Expect = 9e-05
Identities = 21/45 (46%), Positives = 29/45 (63%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKS 58
LP EL+ EIL RV + ++ R+VCK W SL D++FV H +S
Sbjct: 6 LPWELVEEILCRVPPQSLVKFRTVCKQWNSLFDDNKFVNDHFVQS 50
>At3g24700 hypothetical protein
Length = 249
Score = 41.6 bits (96), Expect = 2e-04
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 12 TILPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDDQFVQKHLHKSLADI 62
T LP++L EIL+RV + + +L++ CK W +L D +FV+K+L K+ +
Sbjct: 3 TDLPLDLESEILSRVPATSLQRLKTTCKRWYALFRDPRFVKKNLGKAATHV 53
>At3g19410 hypothetical protein
Length = 373
Score = 41.6 bits (96), Expect = 2e-04
Identities = 24/59 (40%), Positives = 32/59 (53%), Gaps = 1/59 (1%)
Query: 14 LPVELMIEILARVDSNNPLQLRSVCKWWKSLVVDD-QFVQKHLHKSLADITDLLSTATE 71
LP +L+ EIL V + +LRS CK W L DD +F +KH K+ L+ST E
Sbjct: 6 LPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLMSTNEE 64
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.313 0.129 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,766,904
Number of Sequences: 26719
Number of extensions: 176547
Number of successful extensions: 9493
Number of sequences better than 10.0: 806
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 3403
Number of HSP's gapped (non-prelim): 3067
length of query: 168
length of database: 11,318,596
effective HSP length: 92
effective length of query: 76
effective length of database: 8,860,448
effective search space: 673394048
effective search space used: 673394048
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC149207.4