BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149205.5 + phase: 0 /pseudo
(738 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g32110 non-LTR reverse transcriptase, putative 241 8e-64
At2g17610 putative non-LTR retroelement reverse transcriptase 234 1e-61
At2g31520 putative non-LTR retroelement reverse transcriptase 229 4e-60
At2g25550 putative non-LTR retroelement reverse transcriptase 229 5e-60
At2g17910 putative non-LTR retroelement reverse transcriptase 228 9e-60
At1g47910 reverse transcriptase, putative 228 9e-60
At3g45550 putative protein 227 2e-59
At2g45230 putative non-LTR retroelement reverse transcriptase 224 2e-58
At2g05200 putative non-LTR retroelement reverse transcriptase 224 2e-58
At1g24640 hypothetical protein 223 4e-58
At2g41580 putative non-LTR retroelement reverse transcriptase 221 9e-58
At2g16680 putative non-LTR retroelement reverse transcriptase 221 1e-57
At4g10830 putative protein 217 2e-56
At2g31080 putative non-LTR retroelement reverse transcriptase 216 4e-56
At2g11240 pseudogene 214 1e-55
At3g44650 putative protein 207 2e-53
At4g09710 RNA-directed DNA polymerase -like protein 206 4e-53
At2g23880 putative non-LTR retroelement reverse transcriptase 206 4e-53
At2g28980 putative non-LTR retroelement reverse transcriptase 205 8e-53
At1g25430 hypothetical protein 203 2e-52
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 241 bits (616), Expect = 8e-64
Identities = 178/580 (30%), Positives = 264/580 (44%), Gaps = 41/580 (7%)
Query: 176 DGILIANEVVDEAKKTK--KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIKE 233
D I++ EVV ++ K K +L K+D EKAYD + L+ ++ P W +WI +
Sbjct: 1088 DNIVVVQEVVHSMRRKKGVKGWMLLKLDLEKAYDRIRWDLLEDTLKAAGLPGTWVQWIMK 1147
Query: 234 CISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGYV 293
C+ + +L NG TD F RGLRQGDPLSP+LF++ E L L++S + +K
Sbjct: 1148 CVEGPSMRLLWNGEKTDAFKPLRGLRQGDPLSPYLFVLCIERLCHLIESSIAAKKWKPIK 1207
Query: 294 VGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS-LLVGVNI 352
+ S + SH+ FADD +L E S +R LR VL F SG KV+ KS + N+
Sbjct: 1208 ISQSGPRL-SHICFADDLILFAEASIDQIRVLRGVLEKFCGASGQKVSLEKSKIYFSKNV 1266
Query: 353 GESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSFG 412
+ K K L YLG+ I + V+ +RL+GW+ LSF
Sbjct: 1267 LRDLGKRISEESGMKATKDLGKYLGVPILQKRINKETFGEVIKRFSSRLAGWKGRMLSFA 1326
Query: 413 GRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCLK 472
GRL L K+VLTS+ V+ +S K P + ++ + F W + + +K +AW+ VCL
Sbjct: 1327 GRLTLTKAVLTSILVHTMSTIKLPQSTLDGLDKVSRAFLWGSTLEKKKQHLVAWTRVCLP 1386
Query: 473 KEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARY---GEEARRLEVGGRSVS 529
+ GGLG+R N AL++K WR+L D W +V+ ++Y R V + S
Sbjct: 1387 RREGGLGIRSATAMNKALIAKVGWRVLNDGSSLWAQVVRSKYKVGDVHDRNWTVAKSNWS 1446
Query: 530 SWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLTT 589
S W+ V GVG D W + ++GDG FW DRWL + P L
Sbjct: 1447 STWRSV-----GVGLRDVIW--REQHWVIGDGRQIRFWTDRWLSETPIADDSIVPLSL-A 1498
Query: 590 NKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVL---------DRW 640
+CT D++R G W + + DN RL L + DR
Sbjct: 1499 QMLCTARDLWRDGTG------------WDMSQIAPFVTDNKRLDLLAVIVDSVTGAHDRL 1546
Query: 641 QWDPDTIDVYTVRGVYQILTT--SVSNTIVKTDELVWHKQVPLN*VSIVAWRLLKDRLPT 698
W + +TV+ + +LT S + VW Q P V + W ++ + T
Sbjct: 1547 AWGMTSDGRFTVKSAFAMLTNDDSPRQDMSSLYGRVWKVQAPER-VRVFLWLVVNQAIMT 1605
Query: 699 KTNLQRRDCLQATVNTCVSGCGIAESASHLFLHCEVFSSL 738
+ +RR + V C G ES H+ C S +
Sbjct: 1606 NSERKRRHLCDSDV--CQVCRGGIESILHVLRDCPAMSGI 1643
>At2g17610 putative non-LTR retroelement reverse transcriptase
Length = 773
Score = 234 bits (598), Expect = 1e-61
Identities = 179/591 (30%), Positives = 281/591 (47%), Gaps = 64/591 (10%)
Query: 174 ILDGILIANEVVDE--AKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWI 231
I D ILIA+E++ KK + + K+D KA+D ++ G+++A+M++M F W WI
Sbjct: 2 ITDNILIAHELIHSLHTKKLVQPFVATKLDITKAFDKIEWGFIEAIMKQMGFSEKWCNWI 61
Query: 232 KECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKG 291
CI+TTT SIL+NG P RG+RQGDP+SP+L+++ EGL+ L+++ ++ G
Sbjct: 62 MTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKAKQLHG 121
Query: 292 YVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS-LLVGV 350
+ + N +SHL FA D+L+ + + L VL L+ + SG VNF KS +L G
Sbjct: 122 FKA-SRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFGK 180
Query: 351 NIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLS 410
+ + + +L + YLGL K + + T+ ++ W + LS
Sbjct: 181 GLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKLLS 240
Query: 411 FGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVC 470
G+ VL+KS++T++P Y++S F P +I I S F+W ++ KI W+AWS +
Sbjct: 241 PAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKLN 300
Query: 471 LKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSS 530
K+ GGL +R L++FN+AL++K WR+L RV A+Y + R L+ S SS
Sbjct: 301 DPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSS 360
Query: 531 W-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFN--RRFARLFDL 587
+ WK I G G + + G+G+N W D WL P N R D
Sbjct: 361 YAWK---SILHGTKLISRG-----LKYIAGNGNNIQLWKDNWL---PLNPPRPPVGTCDS 409
Query: 588 TTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEE--CRSLLDNVRLRLNVL-------- 637
+++ V+D+ G W E+ C+ + N + +
Sbjct: 410 IYSQL-KVSDLLIEG---------------RWNEDLLCKLIHQNDIPHIRAIRPSITGAN 453
Query: 638 DRWQWDPDTIDVYTVRGVYQIL-------------TTSVSNTIVKTDELVWHKQVPLN*V 684
D W Y+V+ Y +L VS V T+ +W + P +
Sbjct: 454 DAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVSAQTVFTN--IWKQNAPPK-I 510
Query: 685 SIVAWRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIA-ESASHLFLHCEV 734
WR + LPT NL+RR + T +TC CG A E +HL C V
Sbjct: 511 KHFWWRSAHNALPTAGNLKRRRLI--TDDTC-QRCGEASEDVNHLLFQCRV 558
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 229 bits (584), Expect = 4e-60
Identities = 168/549 (30%), Positives = 264/549 (47%), Gaps = 35/549 (6%)
Query: 174 ILDGILIANEVVDEAKKTK---KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D ++IA+EV+ K K K + K D KAYD V+ +L+ M+ F W W
Sbjct: 702 INDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGW 761
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
I + + S+L+NGSP + RG+RQGDPLSP+LF++ + L+ L+ + +
Sbjct: 762 IMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLR 821
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
G +G + + ++HLQFADD+L + + N +AL+ V ++ SG K+N KS++ G
Sbjct: 822 GVRIG-NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFG 880
Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
+ S + +L YLGL +K +E ++ +K R S W + FL
Sbjct: 881 SRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFL 940
Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
S G+ ++LKSV ++PVYA+S FK P GI+S IESL F+W + + R I W+AW +
Sbjct: 941 SPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRL 1000
Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
K+ GGLG R L +FN AL++K WRL+ + RV+ ARY ++ L+ R
Sbjct: 1001 QYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQ 1060
Query: 530 SW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLT 588
S+ W A + DG+ +G L+GDG N D + P L
Sbjct: 1061 SYGW---ASLLDGIALLKKG-----TRHLIGDGQNIRIGLDNIVDSHPPR----PLNTEE 1108
Query: 589 TNKMCTVADMYRLGWEEGGDAWVW--RRRLWAWEEECRSLLDNVRL-RLNVLDRWQWDPD 645
T K T+ +++ E G + W + ++ + + L + D+ W+ +
Sbjct: 1109 TYKEMTINNLF----ERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYN 1164
Query: 646 TIDVYTVRGVYQILTTSVSNTI---------VKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
T YTVR Y +LT S I + +W+ + + + WR L L
Sbjct: 1165 TTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPI-MPKLKHFLWRALSQAL 1223
Query: 697 PTKTNLQRR 705
T L R
Sbjct: 1224 ATTERLTTR 1232
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 229 bits (583), Expect = 5e-60
Identities = 168/549 (30%), Positives = 263/549 (47%), Gaps = 35/549 (6%)
Query: 174 ILDGILIANEVVDEAKKTK---KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D ++IA+EV+ K K K + K D KAYD V+ +L+ M+ F W W
Sbjct: 928 INDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGW 987
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
I + + S+L+NGSP + RG+RQGDPLSP+LF++ + L+ L+ + +
Sbjct: 988 IMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLR 1047
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
G +G + + ++HLQFADD+L + + N +AL+ V ++ SG K+N KS++ G
Sbjct: 1048 GVRIG-NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFG 1106
Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
+ S +L YLGL +K +E ++ +K R S W + FL
Sbjct: 1107 SRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFL 1166
Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
S G+ ++LKSV ++PVYA+S FK P GI+S IESL F+W + + R I W+AW +
Sbjct: 1167 SPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRL 1226
Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
K+ GGLG R L +FN AL++K WRL+ + RV+ ARY ++ L+ R
Sbjct: 1227 QYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQ 1286
Query: 530 SW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLT 588
S+ W A + DG+ +G L+GDG N D + P L
Sbjct: 1287 SYGW---ASLLDGIALLKKG-----TRHLIGDGQNIRIGLDNIVDSHPPR----PLNTEE 1334
Query: 589 TNKMCTVADMYRLGWEEGGDAWVW--RRRLWAWEEECRSLLDNVRL-RLNVLDRWQWDPD 645
T K T+ +++ E G + W + ++ + + L + D+ W+ +
Sbjct: 1335 TYKEMTINNLF----ERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYN 1390
Query: 646 TIDVYTVRGVYQILTTSVSNTI---------VKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
T YTVR Y +LT S I + +W+ + + + WR L L
Sbjct: 1391 TTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPI-MPKLKHFLWRALSQAL 1449
Query: 697 PTKTNLQRR 705
T L R
Sbjct: 1450 ATTERLTTR 1458
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 228 bits (581), Expect = 9e-60
Identities = 165/584 (28%), Positives = 279/584 (47%), Gaps = 53/584 (9%)
Query: 174 ILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D IL+A+E++ + + KE + FK D KAYD V+ +L+ +M + F W W
Sbjct: 524 ISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISW 583
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
I C+++ + S+L+NG P RG+RQGDPLSP LF++ E L ++ +
Sbjct: 584 IMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKIT 643
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
G + V V+HL FADDTLL+ + + L L+ + ++SG +N NKS + G
Sbjct: 644 G-IQFQDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFG 702
Query: 350 VNIG---ESWLLEAASV-LNCKVGKILFLYLGLS--IGGDPRKLAFWEPVVSTIKTRLSG 403
N+ + W+ + + L GK YLGL + G R L + + +++RL+G
Sbjct: 703 KNVDIQIKDWIKSRSGISLEGGTGK----YLGLPECLSGSKRDLFGF--IKEKLQSRLTG 756
Query: 404 WQSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISW 463
W + LS GG+ VLLKS+ +LPVY +S FK P + + ++ F+W + RKI W
Sbjct: 757 WYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHW 816
Query: 464 IAWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEV 523
++W + L K+ GG G + L+ FN AL++K WR+L ++G + RV +RY + L
Sbjct: 817 LSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSA 876
Query: 524 GGRSVSSW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGD----VPFN 578
S S+ W+ + ++ + + ++G+G T W D+WL D P N
Sbjct: 877 TRGSRPSYAWRSILFGRE--------LLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLN 928
Query: 579 RRFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLD 638
RR DL K+ + D W R L+ W++ ++ R D
Sbjct: 929 RRRFINVDL---KVSQLIDPTSRNWNLN-----MLRDLFPWKDV--EIILKQRPLFFKED 978
Query: 639 RWQWDPDTIDVYTVRGVYQILTTSVSNTIVKTDEL----------VWHKQVPLN*VSIVA 688
+ W +Y+V+ Y+ L+ V + + + ++ +W+ + I
Sbjct: 979 SFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPK-IRIFL 1037
Query: 689 WRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
W+ L +P + L+ R + + C+ E+ +H+ C
Sbjct: 1038 WKALHGAIPVEDRLRTRGI--RSDDGCLMCDTENETINHILFEC 1079
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 228 bits (581), Expect = 9e-60
Identities = 170/575 (29%), Positives = 271/575 (46%), Gaps = 37/575 (6%)
Query: 174 ILDGILIANEVVDEAKKT---KKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D ILIA E+ + K + + K D KAYD V+ +++A+++KM F W W
Sbjct: 330 ISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISW 389
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
I CI+T +L+NG P RGLRQGDPLSP+LF++ E L ++ NL
Sbjct: 390 IMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLIT 449
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLL-VG 349
G V A+ S VSHL FADD+L + + + +L + +SG ++NF+KS + G
Sbjct: 450 GIKV-ATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFG 508
Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGL--SIGGDPRKLAFWEPVVSTIKTRLSGWQSC 407
+ +S + +L + YLGL S+GG K+ + V +++R++GW +
Sbjct: 509 HKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSF--VRDRLQSRINGWSAK 566
Query: 408 FLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWS 467
FLS GG+ V++KSV +LP Y +S F+ P I S + S KF+W + D+R + W+AW
Sbjct: 567 FLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWD 626
Query: 468 SVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLE-VGGR 526
+C K GGLG R + +FN AL++K WRL+ + +V RY ++ L+ +
Sbjct: 627 KLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSY 686
Query: 527 SVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWL-GDVPFNRRFARLF 585
S S W+ + + V + G + K VG G++ W D W+ P ++
Sbjct: 687 SPSYGWRSMISARSLV-------YKGLI-KRVGSGASISVWNDPWIPAQFPRPAKYGGSI 738
Query: 586 DLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRL-RLNVLDRWQWDP 644
+ K+ ++ D + W ++ E L+ + + N+ D W
Sbjct: 739 VDPSLKVKSLID-------SRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHF 791
Query: 645 DTIDVYTVRGVYQIL-------TTSVSNTIVKTDELVWHKQVPLN*VSIVAWRLLKDRLP 697
YTV+ Y TT + + +W Q P + W++L +P
Sbjct: 792 TKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWKVQCPPK-LRHFLWQILSGCVP 850
Query: 698 TKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
NL++R L CVS ES +H C
Sbjct: 851 VSENLRKRGIL--CDKGCVSCGASEESINHTLFQC 883
>At3g45550 putative protein
Length = 851
Score = 227 bits (578), Expect = 2e-59
Identities = 167/549 (30%), Positives = 267/549 (48%), Gaps = 35/549 (6%)
Query: 174 ILDGILIANEVVDEAKKTK---KELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D ++IA+E++ K K K + K D KAYD V+ +L+ M+ F W W
Sbjct: 167 INDNVMIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGW 226
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
I + + S+L+NGSP S RG+RQGDPLSP+LF++ + L+ L+K + +
Sbjct: 227 IMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIR 286
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
G +G + + ++HLQFADD+L + + N +AL+ V ++ SG K+N KSL+ G
Sbjct: 287 GVRIG-NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFG 345
Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
+ S ++LN YLGL +K + ++ +K R + W + FL
Sbjct: 346 SRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFL 405
Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
S G+ +LLKSV ++PVYA+S FK P GI+S IESL F+W + + R I W+AW +
Sbjct: 406 SPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRL 465
Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
K+ GGLG R L +FN AL++K WR++ + RV+ ARY ++ ++ RS
Sbjct: 466 QYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQ 525
Query: 530 SW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARLFDLT 588
S+ W + + G+ +G ++GDG D + P L
Sbjct: 526 SYGW---SSLLSGIALLRKG-----TRYVIGDGKTIRLGIDNVVDSHPPR-------PLL 570
Query: 589 TNKMCTVADMYRLGWEEGGDAWVW-RRRLWAW-EEECRSLLDNVRLRL-NVLDRWQWDPD 645
T++ + L ++ G + W +L + ++ + + L + DR W +
Sbjct: 571 TDEQHNGLSLDNL-FQHRGHSRCWDNAKLQTFVDQSDHDYIKRIYLSTRSKTDRLIWSYN 629
Query: 646 TIDVYTVRGVYQILTTSVSNTI---------VKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
+ YTVR Y + T SNTI V +W+ + + + WR+L L
Sbjct: 630 STGDYTVRSGYWLSTHDPSNTIPTMAKPHGSVDLKTKIWNLPI-MPKLKHFLWRILSKAL 688
Query: 697 PTKTNLQRR 705
PT L R
Sbjct: 689 PTTDRLTTR 697
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 224 bits (570), Expect = 2e-58
Identities = 167/596 (28%), Positives = 272/596 (45%), Gaps = 59/596 (9%)
Query: 169 VKDMQILDGILIANEVV---DEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
VK I D ILIA+E++ K +E + K D KAYD V+ +L+ M+ + F
Sbjct: 541 VKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFAD 600
Query: 226 LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
W + I EC+ + +L+NG+P E RGLRQGDPLSP+LF+I E L +++S +
Sbjct: 601 HWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQ 660
Query: 286 NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
N G V A + +SHL FADD++ + + + + ++ ++ SG +VN+ KS
Sbjct: 661 KNQITGLKV-ARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKS 719
Query: 346 -LLVGVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGW 404
+ G +I E L + +YLGL K+A + + ++ GW
Sbjct: 720 SIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGW 779
Query: 405 QSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWI 464
QS FLS GG+ +LLK+V +LP Y +S FK P I IES+ +F+W+ ++ R + W
Sbjct: 780 QSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWK 839
Query: 465 AWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLE-- 522
AW + K GGLG + + FN+AL+ K WR++ ++ +V +RY ++ L
Sbjct: 840 AWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAP 899
Query: 523 VGGRSVSSW---WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFN- 578
+G R +W ++ IK G + ++G+G W D W+G P
Sbjct: 900 LGSRPSFAWKSIYEAQVLIKQG------------IRAVIGNGETINVWTDPWIGAKPAKA 947
Query: 579 ----RRFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRL 634
+R + N + V D+ +G D W W DN + +
Sbjct: 948 AQAVKRSHLVSQYAANSIHVVKDLL---LPDGRD--------WNWNLVSLLFPDNTQENI 996
Query: 635 NVL--------DRWQWDPDTIDVYTVRGVYQILTTSVSN----------TIVKTDELVWH 676
L DR+ W+ Y+V+ Y ++T ++ ++ + +W
Sbjct: 997 LALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWK 1056
Query: 677 KQVPLN*VSIVAWRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
VP + WR + + L +NL R A +CV E+ +HL C
Sbjct: 1057 LDVPPK-IHHFLWRCVNNCLSVASNLAYRHL--AREKSCVRCPSHGETVNHLLFKC 1109
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 224 bits (570), Expect = 2e-58
Identities = 171/573 (29%), Positives = 262/573 (44%), Gaps = 37/573 (6%)
Query: 174 ILDGILIANEVVD--EAKKTKKEL-LLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D +LI +EV+ KK + K D KAYD V+ +L V+Q+ F +W W
Sbjct: 441 ISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDW 500
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
+ EC+++ + S L+NG+P + RGLRQGDPLSP LF++ E L+ L
Sbjct: 501 VLECVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLP 560
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
G V N V+HL FADDT+ + + L +L+ + + SG +NF+KS +
Sbjct: 561 GVRVSI-NGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFS 619
Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
S + +L + YLGL RK + ++ I+ + W S FL
Sbjct: 620 SKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFL 679
Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
S G+ V+LK+VL S+P+Y++S FK PS + I+SL +F+W D RK SW+AWS +
Sbjct: 680 SQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKL 739
Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRS-V 528
K GGLG R + N +L++K WRLL R+L+ +Y + +E S
Sbjct: 740 TNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQP 799
Query: 529 SSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGD----VPFNRRFARL 584
S W+ + ++ + ++ GW L+ +G W D WL VP
Sbjct: 800 SHGWRSIIAGRE-ILKEGLGW-------LITNGEKVSIWNDPWLSISKPLVPIGPALREH 851
Query: 585 FDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLDRWQWDP 644
DL ++ + + L W+ A + L +E + L +D+ W P
Sbjct: 852 QDL---RVSALINQNTLQWDWNKIAVI----LPNYENLIKQL---PAPSSRGVDKLAWLP 901
Query: 645 DTIDVYTVRGVYQILTTSVSNTIVKTDELVWH----KQVPLN*VSIVAWRLLKDRLPTKT 700
YT R Y I SV++ + + W K L + + W+ + LP
Sbjct: 902 VKSGQYTSRSGYGI--ASVASIPIPQTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGI 959
Query: 701 NLQRRDCLQATVNTCVSGCGIAESASHLFLHCE 733
L RR + + CG ES +HLF HCE
Sbjct: 960 QLVRR---HISPSAACHRCGAPESTTHLFFHCE 989
>At1g24640 hypothetical protein
Length = 1270
Score = 223 bits (567), Expect = 4e-58
Identities = 142/427 (33%), Positives = 216/427 (50%), Gaps = 16/427 (3%)
Query: 169 VKDMQILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
V + I D IL+A+E+V K + E + K D KAYD V+ YL +++ + F L
Sbjct: 504 VSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHL 563
Query: 226 LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
W WI C+S+ T S+L+N P L RGLRQGDPLSPFLF++ EGL L+
Sbjct: 564 KWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQW 623
Query: 286 NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
+G + + N +V HL FADD+L L + S L+ +L ++ +G +N NKS
Sbjct: 624 EGALEG-IQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQTINLNKS 682
Query: 346 LLV-GVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGW 404
+ G + E + L YLGL K+ + +K +L W
Sbjct: 683 SITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLKEKLDVW 742
Query: 405 QSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWI 464
+ LS GG+ VLLKSV ++PV+A+S FK P +ES F+W + +RKI W
Sbjct: 743 FTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDHSRKIHWQ 802
Query: 465 AWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVG 524
+W +CL K+ GGLG R ++ FN AL++K WRLL R+L +RY + L+
Sbjct: 803 SWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAA 862
Query: 525 -GRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFAR 583
+ S W+ + ++ + + + K VGDG++ W D W+ D F + +
Sbjct: 863 LSQRPSFGWRSILFGRELLSKG--------LQKRVGDGASLFVWIDPWIDDNGFRAPWRK 914
Query: 584 --LFDLT 588
++D+T
Sbjct: 915 NLIYDVT 921
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 221 bits (564), Expect = 9e-58
Identities = 160/589 (27%), Positives = 269/589 (45%), Gaps = 53/589 (8%)
Query: 169 VKDMQILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPL 225
V + + D I++A+E+V + K K+ ++FK D KAYD V+ +L ++ + F
Sbjct: 270 VAERLVSDNIILAHEIVHNLRTNEKISKDFMVFKTDMSKAYDRVEWPFLKGILLALGFNS 329
Query: 226 LWRKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVE 285
W W+ C+S+ + S+L+NG P + HRGLRQGDPLSPFLF++ E L ++ +
Sbjct: 330 TWINWMMACVSSVSYSVLINGQPFGHITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEK 389
Query: 286 NNLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKS 345
G + V+HL FADDTLL+ + S + L+ + +SG +N KS
Sbjct: 390 IGKISGIQFNGTGP-SVNHLLFADDTLLICKASQLECAEIMHCLSQYGHISGQMINSEKS 448
Query: 346 LLV-GVNIGE---SWLLEAASV-LNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTR 400
+ G + E W++ + + GK YLGL K + + +++R
Sbjct: 449 AITFGAKVNEETKQWIMNRSGIQTEGGTGK----YLGLPECFQGSKQVLFGFIKEKLQSR 504
Query: 401 LSGWQSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRK 460
LSGW + LS GG+ +LLKS+ + PVYA++ F+ + + + S+ F+W +D +K
Sbjct: 505 LSGWYAKTLSQGGKDILLKSIAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQDKKK 564
Query: 461 ISWIAWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARR 520
I WI + L K GG G + L+ FN AL++K RL D ++L +RY +
Sbjct: 565 IHWIGAQKLMLPKFLGGFGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYMNSDF 624
Query: 521 LE-VGGRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWL-GDVPFN 578
L G S W+ + ++ V + K++G+G NT W D W+ D P
Sbjct: 625 LSATKGTRPSYAWQSILYGRE--------LLVSGLKKIIGNGENTYVWMDNWIFDDKPRR 676
Query: 579 RRFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLD 638
++ K+ + D + W R L+ W+E ++ R + D
Sbjct: 677 PESLQIMVDIQLKVSQLIDPFSRNWNLN-----MLRDLFPWKE--IQIICQQRPMASRQD 729
Query: 639 RWQWDPDTIDVYTVRGVYQILTTSVSNTIVKTDE----------LVWH-KQVPLN*VSIV 687
+ W +YTV+ Y + + V + K E +W+ P + +
Sbjct: 730 SFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKIWNLNSAPK--IKVF 787
Query: 688 AWRLLKDRLPTKTNLQRRDCLQATVNTCVSGCGIA----ESASHLFLHC 732
W++LK + + L+ R L GC + E+ +H+ C
Sbjct: 788 LWKVLKGAVAVEDRLRTRGVL------IEDGCSMCPEKNETLNHILFQC 830
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 221 bits (562), Expect = 1e-57
Identities = 163/581 (28%), Positives = 267/581 (45%), Gaps = 47/581 (8%)
Query: 174 ILDGILIANEVVDEAK---KTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKW 230
I D ILIA+E+V + K KE ++FK D KAYD V+ +L ++ + F W W
Sbjct: 498 ISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAYDRVEWSFLQEILVALGFNDKWISW 557
Query: 231 IKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFK 290
I C+++ T S+L+NG + RG+RQGDP+SPFLF++ E L +++ +
Sbjct: 558 IMGCVTSVTYSVLINGQHFGHITPERGIRQGDPISPFLFVLCTEALIHILQQAENSKKVS 617
Query: 291 GYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-G 349
G S V +HL F DDT L+ + ++ + L+ + +SG +N KS + G
Sbjct: 618 GIQFNGSGPSV-NHLLFVDDTQLVCRATKSDCEQMMLCLSQYGHISGQLINVEKSSITFG 676
Query: 350 VNIGES---WLLEAASV-LNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQ 405
V + E W+ + + L GK YLGL K + + +++ LSGW
Sbjct: 677 VKVDEDTKRWIKNRSGIHLEGGTGK----YLGLPENLSGSKQDLFGYIKEKLQSHLSGWY 732
Query: 406 SCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIA 465
LS GG+ +LLKS+ +LPVY ++ F+ P G+ + + S+ F+W E + KI WI
Sbjct: 733 DKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFSNKIHWIG 792
Query: 466 WSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEV-G 524
+ L K GG G + L+ FN AL++K WRL D ++ +RY L
Sbjct: 793 GKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQ 852
Query: 525 GRSVSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFARL 584
G S W+ + ++ + G + +L+G+G T W D+WL D +RR L
Sbjct: 853 GTRPSYTWRSILYGRELLN--------GGLKRLIGNGEQTNVWIDKWLFD-GHSRRPMNL 903
Query: 585 FDLTT--NKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLDNVRLRLNVLDRWQW 642
L K+ + D W ++ + E+ L+ + R ++ D + W
Sbjct: 904 HSLMNIHMKVSHLIDPLTRNWN-------LKKLTELFHEKDVQLIMHQRPLISSEDSYCW 956
Query: 643 DPDTIDVYTVRGVYQILTTSVSNTIVKTDEL----------VWH-KQVPLN*VSIVAWRL 691
+YTV+ Y+ + + K ++ VW + VP + + W+
Sbjct: 957 AGTNNGLYTVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPK--IKVFMWKA 1014
Query: 692 LKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
LK L + L+ R T + C+ E+ +HL C
Sbjct: 1015 LKGALAVEDRLRSRGI--RTADGCLFCKEEIETINHLLFQC 1053
>At4g10830 putative protein
Length = 1294
Score = 217 bits (553), Expect = 2e-56
Identities = 128/361 (35%), Positives = 199/361 (54%), Gaps = 7/361 (1%)
Query: 176 DGILIANEVVDEAKKTKK---ELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
D ++IA+E++ K K+ + K D KAYD V+ +L+ M+ F W KWI
Sbjct: 910 DNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIM 969
Query: 233 ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
+ + S+LVNG P RG+RQGDPLSP+LF++ A+ LN L+K+ V +G
Sbjct: 970 GAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGI 1029
Query: 293 VVGASNSVV-VSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-GV 350
+G N V V+HLQFADD+L + + N +AL+ V ++ SG K+N +KS++ G
Sbjct: 1030 RIG--NGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGS 1087
Query: 351 NIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLS 410
+ + ++L + YLGL +K + ++ +K R S W + +LS
Sbjct: 1088 RVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLS 1147
Query: 411 FGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVC 470
G+ ++LKSV S+PVYA+S FK P I+S IE+L F+W + R+I WIAW +
Sbjct: 1148 PAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQ 1207
Query: 471 LKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSS 530
K+ GGLG R L +FN AL++K WR++ + + R++ ARY E L+ + S
Sbjct: 1208 YSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAKRQRYQS 1267
Query: 531 W 531
+
Sbjct: 1268 Y 1268
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 216 bits (550), Expect = 4e-56
Identities = 172/575 (29%), Positives = 256/575 (43%), Gaps = 47/575 (8%)
Query: 175 LDGILIANEVVDEA--KKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
+D I++ E V KK +K +L K+D EKAYD V +L ++ W I
Sbjct: 411 IDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIM 470
Query: 233 ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
++ + S+L NG TD F RGLRQGDPLSP+LF++ E L L+++ V +K
Sbjct: 471 AGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPI 530
Query: 293 VVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV---G 349
V S + SH+ FADD +L E S A +R +R VL F E SG KV+ KS +
Sbjct: 531 AVSCGGSKL-SHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHN 589
Query: 350 VNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFL 409
V+ L+ S + C K L YLG+ I + V+ + RL+GW+ L
Sbjct: 590 VSREMEQLISEESGIGCT--KELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSL 647
Query: 410 SFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSV 469
S GR+ L K+VL+S+PV+ +S P + ++ F W + + +K ++W +
Sbjct: 648 SLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKI 707
Query: 470 CLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVS 529
C K GG+G+R R+ N AL++K WRLL D+ W RV+ +Y +VGG +
Sbjct: 708 CKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY-------KVGGVQDT 760
Query: 530 SW----------WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNR 579
SW W+ VA V GW + GDG FW DRWL P
Sbjct: 761 SWLKPQPRWSSTWRSVAVGLREVVVKGVGW-------VPGDGCTIRFWLDRWLLQEPLVE 813
Query: 580 RFARLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRRLWAWEEECRSLLD-NVRLRLNVLD 638
+ + + VA Y W G + L+ E R LL V++ L D
Sbjct: 814 LGTDM--IPEGERIKVAADY---WLPGSGWNLEILGLYLPETVKRRLLSVVVQVFLGNGD 868
Query: 639 RWQWDPDTIDVYTVRGVYQILTTSVSN--TIVKTDELVWHKQVPLN*VSIVAWRLLKDRL 696
W +TVR Y +L V + + +W K + V + W + ++ +
Sbjct: 869 EISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIW-KLITPERVRVFIWLVSQNVI 927
Query: 697 PTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLH 731
T RR + + C + A LH
Sbjct: 928 MTNVERVRRHLSENAI------CSVCNGAEETILH 956
>At2g11240 pseudogene
Length = 1044
Score = 214 bits (545), Expect = 1e-55
Identities = 134/402 (33%), Positives = 202/402 (49%), Gaps = 14/402 (3%)
Query: 176 DGILIANEVVDEAKKTKKELLLF---KVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIK 232
D +LI +E + K E F K + KAYD ++ ++ VMQ+M F W WI
Sbjct: 374 DNVLITHEALHYLKSLGAEKRCFMAVKTNMSKAYDRIEWDFIKLVMQEMGFHQTWISWIL 433
Query: 233 ECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGY 292
+CI+T + S L+NGS + RGLRQGDPLSPFLF+I +E L+ L + + G
Sbjct: 434 QCITTVSYSFLLNGSAQGAVTPERGLRQGDPLSPFLFIICSEVLSGLCRKAQLDGSLLGL 493
Query: 293 VVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV-GVN 351
V N V +HL FADDT+ + + +L + E SG +N +KS +
Sbjct: 494 RVSKGNPRV-NHLLFADDTIFFCRSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSRK 552
Query: 352 IGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSF 411
+ EA +L ++ L YLGL +K + +V I+ R W S FLS
Sbjct: 553 TPDHIKTEAQQILGIQLVGGLGKYLGLPKMFGRKKRDLFNQIVDRIRQRSLSWSSRFLST 612
Query: 412 GGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCL 471
G+ +LKSVL S+P Y +S FK + I+S F+W S D +K+ WIAWS +
Sbjct: 613 AGKTTMLKSVLASMPTYTMSCFKLLVSLCKRIQSALTHFWWDSSADKKKMCWIAWSKMAK 672
Query: 472 KKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSS- 530
K+ GGLG + + FN AL++K WR++ R+L+ +Y + L+ + SS
Sbjct: 673 NKKEGGLGFKDITNFNDALLAKLSWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSH 732
Query: 531 WWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWL 572
W+ + KD + ++ K++G G +TL W + WL
Sbjct: 733 GWRGICTGKDLI--------KSQLGKVIGSGLDTLVWNEPWL 766
>At3g44650 putative protein
Length = 762
Score = 207 bits (526), Expect = 2e-53
Identities = 165/549 (30%), Positives = 255/549 (46%), Gaps = 48/549 (8%)
Query: 169 VKDMQILDGILIANEVV-DEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLW 227
VKD +++ +L+A ++V D K + E K+D KA DSV +L + M FP ++
Sbjct: 119 VKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMF 178
Query: 228 RKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENN 287
WI+ CI+T + S+ VNG F RGLRQG LSP+LF+I + L+ L+ VV
Sbjct: 179 IHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIG 238
Query: 288 LFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLL 347
GY + ++HL FADD ++L + ++ + V LF++ SGLK++ KS +
Sbjct: 239 RI-GYHPHCKR-MGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTI 296
Query: 348 VGVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSC 407
+ + + + +VG++ YLGL + + P++ I+ R+ W S
Sbjct: 297 FSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSR 356
Query: 408 FLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWS 467
FLSF GR L+ S++ S + LS F+ P I IE L + F W G+ N K + I+W+
Sbjct: 357 FLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWN 416
Query: 468 SVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYR-VLVARYGEEARRLEVGGR 526
VC K GGLG+R L+E N K WR++ W + V E +
Sbjct: 417 QVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKENA 476
Query: 527 SVSSW-WKEVAKIKDGVGEDDEGWFVGKVSKL-VGDGSNTLFWFDRW--LGDVPFNRRFA 582
++ SW WK++ K + GV + + K VG+G +T FWFD W LG +
Sbjct: 477 NLGSWIWKKILKYR-GVAK--------RFCKAEVGNGESTSFWFDDWSLLGRLIDVAGIR 527
Query: 583 RLFDLTTNKMCTVADMYRLGWEEGGDAWVWRRR------LWAWEEECRSLLDNVRLRLNV 636
D+ ++ +VA DAW RRR + EE S R +
Sbjct: 528 GTIDMGISRTMSVA-----------DAWTSRRRRHHRQEILNTIEEVLSTQHQKRTQQQQ 576
Query: 637 LDR--WQWDPDTI-DVYTVRGVYQILTTSVSNTIVKTDELVWHKQV----PLN*VSIVAW 689
R W+ D D ++ + + L T+ ++E+ WHK V S W
Sbjct: 577 QGRVLWKGKNDIYKDKFSTKNTWNYLRTT-------SNEVAWHKGVWFPHATPKYSFCLW 629
Query: 690 RLLKDRLPT 698
DRL T
Sbjct: 630 LAAHDRLAT 638
>At4g09710 RNA-directed DNA polymerase -like protein
Length = 1274
Score = 206 bits (524), Expect = 4e-53
Identities = 172/580 (29%), Positives = 262/580 (44%), Gaps = 59/580 (10%)
Query: 174 ILDGILIANEV-----VDEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWR 228
I D +LI +E+ V AKK + K D KAYD + +L V+ ++ F W
Sbjct: 487 IADNVLITHEILHFLRVSGAKKYCS--MAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWI 544
Query: 229 KWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENNL 288
+W+ +C+ T + S L+NGSP RGLRQGDPLSP+LF++ E L+ L + E +
Sbjct: 545 RWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGV 604
Query: 289 FKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLLV 348
G V A S V+HL FADDT+ + + AL +L + SG +N KS +
Sbjct: 605 MVGIRV-ARGSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAIT 663
Query: 349 -----GVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSG 403
+I L +GK YLGL RK + +V I+ R
Sbjct: 664 FSSKTPQDIKRRVKLSLRIDNEGGIGK----YLGLPEHFGRRKRDIFSSIVDRIRQRSHS 719
Query: 404 WQSCFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISW 463
W FLS G+ +LLK+VL+S+P YA+ FK P+ + I+S+ +F+W D RK++W
Sbjct: 720 WSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAW 779
Query: 464 IAWSSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEV 523
++W + L GGLG R + +K WR+L + RVL+ +Y + ++
Sbjct: 780 VSWDKLTLPINEGGLGFR-------EIEAKLSWRILKEPHSLLSRVLLGKYCNTSSFMDC 832
Query: 524 GGRS--VSSWWKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRF 581
S W+ + +D + GW +G+ GD N W + WL P + +
Sbjct: 833 SASPSFASHGWRGILAGRD-LLRKGLGWSIGQ-----GDSINV--WTEAWLS--PSSPQT 882
Query: 582 ARLFDLTTNKMCTVADMYRLGWEEGGDAWVW-----RRRLWAWEEECRSLLDNVRLRLNV 636
TNK +V D+ D W R+ L +E++ R + N L +
Sbjct: 883 PIGPPTETNKDLSVHDLI------CHDVKSWNVEAIRKHLPQYEDQIRKITINA---LPL 933
Query: 637 LDRWQWDPDTIDVYTVRGVYQILTTSVSNTIVKTDELVWHKQV----PLN*VSIVAWRLL 692
D W P YT + Y + +++ + W K + V W+ +
Sbjct: 934 QDSLVWLPVKSGEYTTKTGYAL--AKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAM 991
Query: 693 KDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC 732
K LP L RR+ ++A V TC CG ES+ HL L C
Sbjct: 992 KGALPVGEALSRRN-IEAEV-TC-KRCGQTESSLHLMLLC 1028
>At2g23880 putative non-LTR retroelement reverse transcriptase
Length = 1216
Score = 206 bits (524), Expect = 4e-53
Identities = 171/592 (28%), Positives = 272/592 (45%), Gaps = 53/592 (8%)
Query: 169 VKDMQILDGILIANEVV-DEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLW 227
VKD +++ +L+A E+V D K + K+D KA+DS+ +L V+ M FP +
Sbjct: 287 VKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEF 346
Query: 228 RKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLMKSVVENN 287
WI C+ST + SI VNG F RGLRQG LSP+LF+I+ + L+ ++
Sbjct: 347 IHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAR 406
Query: 288 LFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSLL 347
F GY ++ ++HL FADD ++L + +V + VL FA GLK+ K+ L
Sbjct: 407 EF-GYHPRCK-TLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTL 464
Query: 348 VGVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSC 407
+ + +S + VGK+ YLGL + + + P++ I+ R+ W S
Sbjct: 465 YLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSR 524
Query: 408 FLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAWS 467
+LSF GRL L+ SVL S+ + ++ F+ P I+ I + + W G E N K + ++W
Sbjct: 525 YLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWD 584
Query: 468 SVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYRVLVARYGEEARRLEVGGRS 527
+C K+ GGLG++ LRE N K WRLL + W + ++ +G S
Sbjct: 585 EICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHS 644
Query: 528 -VSSW-WKEVAKIKDGVGEDDEGWFVGKVSKL-VGDGSNTLFWFDRWLGDVP-FNRRFAR 583
+ SW W+ + K ++ K+ V +G NT FWFD W P N AR
Sbjct: 645 TLGSWIWRRLLKHRE---------VAKSFCKIEVNNGVNTSFWFDNWSEKGPLINLTGAR 695
Query: 584 -LFDLTTNKMCTVADMYRLGWEEGGDAWVWRRR-------LWAWEEECRSLLDNVRLRLN 635
D+ ++ T+A +AW RRR L +EE + + L
Sbjct: 696 GAIDMGISRHMTLA-----------EAWSRRRRKRHRVEILNEFEEILLQKYQHRNIELE 744
Query: 636 VLDRWQWDPDTIDV-YTVRGVYQILTTSVSNTIVKTDELVWHKQV----PLN*VSIVAWR 690
W+ D ++ + + + TS +++ WHK V S AW
Sbjct: 745 DAILWRGKEDVFKARFSTKDTWNHIRTS-------SNQRAWHKGVWFAHATPKFSFCAWL 797
Query: 691 LLKDRLPTKTNLQRRDCLQATVNTCVSGCGIAESASHLFLHC----EVFSSL 738
+++RL T + + T TCV E+ HLF C E+++S+
Sbjct: 798 AIRNRLSTGDRMMTWN--NGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSI 847
>At2g28980 putative non-LTR retroelement reverse transcriptase
Length = 1529
Score = 205 bits (521), Expect = 8e-53
Identities = 141/426 (33%), Positives = 218/426 (51%), Gaps = 26/426 (6%)
Query: 169 VKDMQILDGILIANEVV-DEAKKTKKELLLFKVDFEKAYDSVD*GYLDAVMQKMAFPLLW 227
VK+ +++ +L+A E+V D K++ K+D KA+DSV +L ++ + FP +
Sbjct: 863 VKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETF 922
Query: 228 RKWIKECISTTTASILVNGSPTDEFSLHRGLRQGDPLSPFLFMIAAEGLNVLM-KSVVEN 286
R WIK CIST T S+ VNG F RGLRQG LSP+LF+I L+ ++ ++ V
Sbjct: 923 RHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHR 982
Query: 287 NLFKGYVVGASNSVVVSHLQFADDTLLLGEKSWANVRALRAVLTLFAEMSGLKVNFNKSL 346
N+ GY + ++HL FADD ++ + ++ + V FA SGL+++ KS
Sbjct: 983 NI--GYHPKCEK-IGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKST 1039
Query: 347 LVGVNIGESWLLEAASVLNCKVGKILFLYLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQS 406
+ + S ++ S G++ YLGL + A + P++ +KT++S W +
Sbjct: 1040 IYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTA 1099
Query: 407 CFLSFGGRLVLLKSVLTSLPVYALSFFKSPSGIISLIESLFNKFFWRGSEDNRKISWIAW 466
LS+ GRL LL SV+ S+ + +S ++ P+G I IE L + F W G N K + IAW
Sbjct: 1100 RSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAW 1159
Query: 467 SSVCLKKEFGGLGVRLLREFNLALMSKWCWRLLIDRGGFWYR---VLVARYGEEARRLEV 523
SS+C K+ GGLG++ L E N K WRLL + W + R G E
Sbjct: 1160 SSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANE- 1218
Query: 524 GGRSVSSW-WKEVAKIKDGVGEDDEGWFVGKVSKLVGDGSNTLFWFDRWLGDVPFNRRFA 582
S+ SW WK++ K ++ + KV V +GS+T FW+D W
Sbjct: 1219 -RSSLGSWMWKKLLKYRELAKS------MHKVE--VRNGSSTSFWYDHW-------SHLG 1262
Query: 583 RLFDLT 588
RL D+T
Sbjct: 1263 RLLDIT 1268
>At1g25430 hypothetical protein
Length = 1213
Score = 203 bits (517), Expect = 2e-52
Identities = 132/386 (34%), Positives = 200/386 (51%), Gaps = 16/386 (4%)
Query: 197 LFKVDFEKAYDSVD*GYLDAVMQKMAFPLLWRKWIKECISTTTASILVNGSPTDEFSLHR 256
+ KVD +KA+DSV ++ A ++ +A P + WI +CIST T ++ +NG F +
Sbjct: 589 MLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTK 648
Query: 257 GLRQGDPLSPFLFMIAAEGLNVLMKSVVENNLFKGYVVGASNSVVVSHLQFADDTLLLGE 316
GLRQGDPLSP+LF++A E + L+ S E+ L Y ASN + +SHL FADD ++ +
Sbjct: 649 GLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIH-YHPKASN-LSISHLMFADDVMIFFD 706
Query: 317 KSWANVRALRAVLTLFAEMSGLKVNFNKS--LLVGVNIGESWLLEAASVLNCKVGKILFL 374
++ + L FA SGLKVN +KS L G+N ES A + +G +
Sbjct: 707 GGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLES---NANAAYGFPIGTLPIR 763
Query: 375 YLGLSIGGDPRKLAFWEPVVSTIKTRLSGWQSCFLSFGGRLVLLKSVLTSLPVYALSFFK 434
YLGL + ++A +EP++ I R W + LSF GR+ L+ SV+ + +S F
Sbjct: 764 YLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFL 823
Query: 435 SPSGIISLIESLFNKFFWRGSEDNRKISWIAWSSVCLKKEFGGLGVRLLREFNLALMSKW 494
P G I IESL ++F W G+ + K ++W+++CL K GGLG+R L E+N L +
Sbjct: 824 LPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRL 883
Query: 495 CWRLLIDRGGFWYRVLVARYGEEARRLEVGGRSVSSW-WKEVAKIKDGVGEDDEGWFVGK 553
WRL + + W + V G SW WK + ++ + + V K
Sbjct: 884 IWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQ----FLVCK 939
Query: 554 VSKLVGDGSNTLFWFDRWLGDVPFNR 579
VG+G +W+D W P R
Sbjct: 940 ----VGNGLKADYWYDNWTSLGPLFR 961
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.335 0.146 0.498
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,618,986
Number of Sequences: 26719
Number of extensions: 715361
Number of successful extensions: 2628
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2368
Number of HSP's gapped (non-prelim): 123
length of query: 738
length of database: 11,318,596
effective HSP length: 107
effective length of query: 631
effective length of database: 8,459,663
effective search space: 5338047353
effective search space used: 5338047353
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 64 (29.3 bits)
Medicago: description of AC149205.5