BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC149080.4 + phase: 0 
         (79 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g15690 Unknown protein                                              69  4e-13
At3g53960 transporter like protein                                     32  0.074
At5g53050 unknown protein                                              27  2.4
At4g37030 hypothetical protein                                         26  3.1
At5g09420 putative subunit of TOC complex                              25  5.3
At3g27390 unknown protein                                              25  5.3
At3g46960 putative helicase                                            25  9.0
At1g68710 ATPase, putative                                             25  9.0

>At1g15690 Unknown protein
          Length = 770

 Score = 68.9 bits (167), Expect = 4e-13
 Identities = 36/47 (76%), Positives = 39/47 (82%)

Query: 22  LSMKITTYVNARTTLEARKGKRKSSAVAFRSGAVKGFLLAANGLLLL 68
           L MKI TY NARTTLEARKG  K+  VAFRSGAV GFLLAA+GLL+L
Sbjct: 163 LGMKIATYANARTTLEARKGVGKAFIVAFRSGAVMGFLLAASGLLVL 209


>At3g53960 transporter like protein
          Length = 620

 Score = 31.6 bits (70), Expect = 0.074
 Identities = 22/78 (28%), Positives = 39/78 (49%), Gaps = 4/78 (5%)

Query: 2   FRVSGCCLLIITLKQTSDIKLSMKITTYVNARTTLEARKGKRKSSAVAFRSGAVKGFLLA 61
           F +S   ++ +T     D+K+++K T Y +  TTL    G   + A   R G V    L 
Sbjct: 59  FGISTNLVVYLTTILHQDLKMAVKNTNYWSGVTTLMPLLGGFVADAYLGRYGTV----LL 114

Query: 62  ANGLLLLSLIPISITWTV 79
           A  + L+ LI ++++W +
Sbjct: 115 ATTIYLMGLILLTLSWFI 132


>At5g53050 unknown protein
          Length = 396

 Score = 26.6 bits (57), Expect = 2.4
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 22  LSMKITTYVNARTTL--EARKGKRKSSAVAFRSGAVKGFLLAANGLLLLS 69
           L+M+   Y   R TL   + +GK  +S   F +    GFLL   GLL+L+
Sbjct: 326 LTMETPGYFKRRLTLIRSSTEGKNVASPAHFIAEKFHGFLLFLFGLLVLA 375


>At4g37030 hypothetical protein
          Length = 519

 Score = 26.2 bits (56), Expect = 3.1
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 9/40 (22%)

Query: 49 AFRSGAVKGF---------LLAANGLLLLSLIPISITWTV 79
          AF  GA+KG          L+  N  ++L L P  +TWT+
Sbjct: 24 AFFLGAIKGLIVGPIAGLTLIVGNVGVILCLFPAHVTWTI 63


>At5g09420 putative subunit of TOC complex
          Length = 616

 Score = 25.4 bits (54), Expect = 5.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 4   VSGCCLLIITLKQTSDIKLSMKITTY 29
           +SGCC + I L +  D  +S+ + TY
Sbjct: 422 MSGCCQVTIPLGEHGDRPISVSLLTY 447


>At3g27390 unknown protein
          Length = 599

 Score = 25.4 bits (54), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 9/35 (25%)

Query: 53 GAVKGFLLA---------ANGLLLLSLIPISITWT 78
          G +KG +L           N  ++LSL+P+ I WT
Sbjct: 28 GFIKGIVLCPLVCLVVTIGNSAVILSLLPVHIVWT 62


>At3g46960 putative helicase
          Length = 1347

 Score = 24.6 bits (52), Expect = 9.0
 Identities = 11/27 (40%), Positives = 16/27 (58%)

Query: 49  AFRSGAVKGFLLAANGLLLLSLIPISI 75
           AFR  A   +LL  N L  +SL+P+ +
Sbjct: 619 AFRRSAASNWLLLINKLSKMSLLPVVV 645


>At1g68710 ATPase, putative
          Length = 1200

 Score = 24.6 bits (52), Expect = 9.0
 Identities = 13/41 (31%), Positives = 19/41 (45%)

Query: 12  ITLKQTSDIKLSMKITTYVNARTTLEARKGKRKSSAVAFRS 52
           +T      IK S+  T Y    T +E   G+RK   + F+S
Sbjct: 435 LTCNSMEFIKCSVAGTAYGRGVTEVEMAMGRRKGGPLVFQS 475


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.325    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,315,537
Number of Sequences: 26719
Number of extensions: 33958
Number of successful extensions: 124
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 120
Number of HSP's gapped (non-prelim): 9
length of query: 79
length of database: 11,318,596
effective HSP length: 55
effective length of query: 24
effective length of database: 9,849,051
effective search space: 236377224
effective search space used: 236377224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)