BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149050.7 + phase: 0 /pseudo
(887 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g12290 hypothetical protein 38 0.029
At4g10780 putative disease resistance protein 37 0.064
At1g12280 hypothetical protein 37 0.064
At1g63360 disease resistance protein, putative 36 0.084
At1g63350 disease resistance protein, putative 34 0.32
At1g04600 putative myosin heavy chain 33 0.71
At1g62630 putative RPS-2 disease resistance protein (AA002294 33 0.92
At1g61310 similar to disease resistance protein 31 2.7
At1g12210 NBS/LRR disease resistance protein 31 2.7
At1g61190 30 4.6
At1g03720 hypothetical protein 30 4.6
At2g30500 unknown protein 30 6.0
At2g01750 putative myosin heavy chain-like protein 30 6.0
At1g68060 unknown protein 30 6.0
At5g43740 disease resistance protein 30 7.8
At4g21270 kinesin-related protein katA 30 7.8
At1g61180 30 7.8
>At1g12290 hypothetical protein
Length = 884
Score = 37.7 bits (86), Expect = 0.029
Identities = 19/57 (33%), Positives = 32/57 (55%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENE 85
Y+ K+ T+LEE +E LK ++ L +V+T G + ++ WL V TIE++
Sbjct: 28 YIQNIKENLTSLEEAMEDLKALRDDLLRKVQTAEEGGLQRLHQIKVWLKRVKTIESQ 84
>At4g10780 putative disease resistance protein
Length = 892
Score = 36.6 bits (83), Expect = 0.064
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQK 88
Y+ + K LE+ +E L + + RV+ E KG E VQ WL V I N+
Sbjct: 28 YIHKLKDNIVALEKAIEDLTATRDDVLRRVQMEEGKGLERLQQVQVWLKRVEIIRNQFYD 87
Query: 89 WLSDDNAQI*HLIIH 103
LS N +I L +
Sbjct: 88 LLSARNIEIQRLCFY 102
>At1g12280 hypothetical protein
Length = 894
Score = 36.6 bits (83), Expect = 0.064
Identities = 20/75 (26%), Positives = 43/75 (56%), Gaps = 1/75 (1%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETER-RKGYEIAPNVQKWLYDVTTIENELQ 87
Y+ + K +++++E LK + ++ RV+ E + E VQ WL +V+T+EN+
Sbjct: 28 YICELSKNVVAMKKDMEVLKKKRDDVKRRVDIEEFTRRRERLSQVQGWLTNVSTVENKFN 87
Query: 88 KWLSDDNAQI*HLII 102
+ L+ ++A++ L +
Sbjct: 88 ELLTTNDAELQRLCL 102
>At1g63360 disease resistance protein, putative
Length = 884
Score = 36.2 bits (82), Expect = 0.084
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQK 88
Y +K LE+ ++ LK + L+ R++ E +G + Q WL V T+E+ +
Sbjct: 26 YTHNLEKNLAALEKTMKELKAKRDDLERRLKREEARGLQRLSEFQVWLDSVATVEDIIIT 85
Query: 89 WLSDDNAQI*HLII 102
L D N +I L +
Sbjct: 86 LLRDRNVEIQRLCL 99
>At1g63350 disease resistance protein, putative
Length = 535
Score = 34.3 bits (77), Expect = 0.32
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQK 88
Y +K LE +E LK + L +++ E +G + ++ WL V TIE+ +
Sbjct: 26 YTHNLEKNLVALETTMEELKAKRDDLLRKLKREEDRGLQTLGEIKVWLNRVETIESRVND 85
Query: 89 WLSDDNAQI*HLII 102
L+ NA++ L +
Sbjct: 86 LLNARNAELQRLCL 99
>At1g04600 putative myosin heavy chain
Length = 1730
Score = 33.1 bits (74), Expect = 0.71
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 35 KITTNLEEELERLKMIKQALQTRVE-------TERRKGYEIAPNVQKWLYDVTTIENELQ 87
+I +NLE E ERLK + +L+ ++ E+ +G I ++ L + +I+NE
Sbjct: 1095 EIVSNLEAENERLKALVGSLEKKINESGNNSTDEQEEGKYILK--EESLTEDASIDNERV 1152
Query: 88 KWLSDDNAQI*HLIIHWERK 107
K L+D+N + L+ E+K
Sbjct: 1153 KKLADENKDLNDLVSSLEKK 1172
Score = 32.0 bits (71), Expect = 1.6
Identities = 17/68 (25%), Positives = 38/68 (55%)
Query: 40 LEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQKWLSDDNAQI*H 99
LE E ++LK + +++ +++ RK E +PN+ + L + + + E+ L +N ++
Sbjct: 1050 LETENQKLKALVSSMEEKIDELDRKHDETSPNITEKLKEDVSFDYEIVSNLEAENERLKA 1109
Query: 100 LIIHWERK 107
L+ E+K
Sbjct: 1110 LVGSLEKK 1117
>At1g62630 putative RPS-2 disease resistance protein (AA002294
Length = 893
Score = 32.7 bits (73), Expect = 0.92
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQK 88
Y +K LE +E LK + L R++ E +G + Q WL V T+E+ +
Sbjct: 26 YTHNLEKNLVALETTMEELKAKRDDLLRRLKREEDRGLQRLSEFQVWLNRVATVEDIIIT 85
Query: 89 WLSDDNAQI*HLII 102
L D + +I L +
Sbjct: 86 LLRDRDVEIQRLCL 99
>At1g61310 similar to disease resistance protein
Length = 925
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/85 (23%), Positives = 42/85 (48%), Gaps = 5/85 (5%)
Query: 7 LGKETVTKLGELVVESTMKHFKYLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGY 66
+G +T+ ++ + ++ + Y+ +K L+ E+E L+ + +Q +V E +
Sbjct: 11 VGDQTMNRIFDCLIGKS-----YIRTLEKNLRALQREMEDLRATQHEVQNKVAREESRHQ 65
Query: 67 EIAPNVQKWLYDVTTIENELQKWLS 91
+ VQ WL V +I+ E + LS
Sbjct: 66 QRLEAVQVWLDRVNSIDIECKDLLS 90
>At1g12210 NBS/LRR disease resistance protein
Length = 885
Score = 31.2 bits (69), Expect = 2.7
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIA-PNVQKWLYDVTTIENELQ 87
Y+ + +L++ + L + +Q R+ E G+ VQ WL + TIEN+
Sbjct: 28 YIQNLSENLASLQKAMGVLNAKRDDVQGRINREEFTGHRRRLAQVQVWLTRIQTIENQFN 87
Query: 88 KWLSDDNAQI*HLII 102
LS NA+I L +
Sbjct: 88 DLLSTCNAEIQRLCL 102
>At1g61190
Length = 967
Score = 30.4 bits (67), Expect = 4.6
Identities = 18/63 (28%), Positives = 31/63 (48%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQK 88
Y+ +K L+ E+E L+ + +Q +V E + + VQ WL V +I+ E +
Sbjct: 27 YIRNLEKNLRALQREMEDLRATQHEVQNKVAREESRHQQRLEAVQVWLDRVNSIDIECKD 86
Query: 89 WLS 91
LS
Sbjct: 87 LLS 89
>At1g03720 hypothetical protein
Length = 274
Score = 30.4 bits (67), Expect = 4.6
Identities = 20/63 (31%), Positives = 33/63 (51%), Gaps = 5/63 (7%)
Query: 808 NQQEKRLCSLHCNIYVLETFQTLRLSSKDPVILIFHHCKKWTSKIVPIWNFFHEDLVVHL 867
N +LC L+CN Y +E + L+ VI ++ +++ I F H+DLVVHL
Sbjct: 55 NGVRSKLCYLNCNSYKIEICWAIALTRLLQVI--YNITQEY---IAGRLRFDHDDLVVHL 109
Query: 868 SLR 870
++
Sbjct: 110 KMK 112
>At2g30500 unknown protein
Length = 517
Score = 30.0 bits (66), Expect = 6.0
Identities = 26/90 (28%), Positives = 38/90 (41%), Gaps = 3/90 (3%)
Query: 6 ELGKETVTKLGELVVESTMKHFKYLTQHKKITTNLEEEL---ERLKMIKQALQTRVETER 62
E+GK KL L E + T K+ +E L ERL M+K +LQ R R
Sbjct: 291 EIGKAAEEKLKSLQHELELAQRDADTYINKLNAEKKEVLKLQERLAMVKTSLQDRDNEIR 350
Query: 63 RKGYEIAPNVQKWLYDVTTIENELQKWLSD 92
++ QK + I+ E+ K L +
Sbjct: 351 ALKTAVSDAEQKIFPEKAQIKGEMSKMLEE 380
>At2g01750 putative myosin heavy chain-like protein
Length = 629
Score = 30.0 bits (66), Expect = 6.0
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 10 ETVTKLGELV---------VESTMKHFKYLTQHKKITTNLEEELERLKMIKQALQTRVET 60
+TV +L E V V + F+ + + ++I L+ EL R K+ + T V
Sbjct: 274 QTVRELEEAVLAGGTAANAVRDYQRKFQEMNEERRI---LDRELARAKVSASRVATVVAN 330
Query: 61 ERRKGYEIAPNVQKWLYDVTTIENELQK 88
E + G + V++WL + ++ E+Q+
Sbjct: 331 EWKDGSDKVMPVKQWLEERRFLQGEMQQ 358
>At1g68060 unknown protein
Length = 622
Score = 30.0 bits (66), Expect = 6.0
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 10 ETVTKLGELV---------VESTMKHFKYLTQHKKITTNLEEELERLKMIKQALQTRVET 60
+TV +L E V V + F+ + + +K L+ EL R K+ + T V
Sbjct: 267 QTVRELEEAVLAGGAAANAVRDYQRKFQEMNEERK---TLDRELARAKVTANRVATVVAN 323
Query: 61 ERRKGYEIAPNVQKWLYDVTTIENELQK 88
E + G + V++WL + ++ E+Q+
Sbjct: 324 EWKDGNDKVMPVKQWLEERRFLQGEMQQ 351
>At5g43740 disease resistance protein
Length = 862
Score = 29.6 bits (65), Expect = 7.8
Identities = 17/51 (33%), Positives = 25/51 (48%)
Query: 40 LEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQKWL 90
L++ +E LK + L RV E KG + V WL V +E+E + L
Sbjct: 37 LQKTMEELKNGRDDLLGRVSIEEDKGLQRLAQVNGWLSRVQIVESEFKDLL 87
>At4g21270 kinesin-related protein katA
Length = 793
Score = 29.6 bits (65), Expect = 7.8
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 30 LTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQKW 89
LT+ +K +++ E L L+ ++LQ ++ + R + L +VT + NELQ+
Sbjct: 250 LTRAEKEKSSILENLSTLRGHSKSLQDQLSSSRVLQDDAIKQKDSLLSEVTNLRNELQQV 309
Query: 90 LSDDNAQI 97
D + Q+
Sbjct: 310 RDDRDRQV 317
>At1g61180
Length = 889
Score = 29.6 bits (65), Expect = 7.8
Identities = 17/63 (26%), Positives = 31/63 (48%)
Query: 29 YLTQHKKITTNLEEELERLKMIKQALQTRVETERRKGYEIAPNVQKWLYDVTTIENELQK 88
Y+ +K L+ E+E L+ I+ +Q +V + + VQ WL V +++ E +
Sbjct: 26 YIRTLEKNLRALQREMEDLRAIQHEVQNKVARDEARHQRRLEAVQVWLDRVNSVDIECKD 85
Query: 89 WLS 91
LS
Sbjct: 86 LLS 88
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.362 0.160 0.608
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,868,158
Number of Sequences: 26719
Number of extensions: 611477
Number of successful extensions: 2522
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2506
Number of HSP's gapped (non-prelim): 21
length of query: 887
length of database: 11,318,596
effective HSP length: 108
effective length of query: 779
effective length of database: 8,432,944
effective search space: 6569263376
effective search space used: 6569263376
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.9 bits)
S2: 65 (29.6 bits)
Medicago: description of AC149050.7