BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148995.8 + phase: 0 
         (325 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g53390 putative protein                                            508  e-144
At2g37160 unknown protein                                             442  e-124
At5g52820 Notchless protein homolog                                    54  1e-07
At2g43770 putative splicing factor                                     50  1e-06
At5g23430 unknown protein                                              50  2e-06
At5g08390 katanin p80 subunit - like protein                           50  2e-06
At1g11160 hypothetical protein                                         49  5e-06
At1g71840 unknown protein (At1g71840)                                  48  6e-06
At3g18130 protein kinase C-receptor/G-protein, putative                48  8e-06
At1g61210                                                              47  1e-05
At2g41500 putative U4/U6 small nuclear ribonucleoprotein               45  4e-05
At5g50230 putative protein                                             45  5e-05
At5g14050 unknown protein                                              45  5e-05
At2g20330 putative WD-40 repeat protein                                45  7e-05
At5g25150 transcription initiation factor IID-associated factor-...    44  9e-05
At4g05410 U3 snoRNP-associated -like protein                           44  9e-05
At5g67320 unknown protein                                              44  2e-04
At1g18080   putative guanine nucleotide-binding protein beta sub...    44  2e-04
At5g16750 WD40-repeat protein                                          43  2e-04
At2g47410 putative WD-40 repeat protein                                43  3e-04

>At3g53390 putative protein
          Length = 556

 Score =  508 bits (1307), Expect = e-144
 Identities = 248/326 (76%), Positives = 279/326 (85%), Gaps = 15/326 (4%)

Query: 8   RCTCISWVPGGDGAFVVAHADGNLYNKDGAGESSFPILKDQTLFSVAHARYSKSNPIARW 67
           RCT ISWVPGGDGAFVVAHADGNLYNKDGA ES+FP ++D T FSV  A+YSKSNP+ARW
Sbjct: 238 RCTSISWVPGGDGAFVVAHADGNLYNKDGATESTFPAIRDPTQFSVDKAKYSKSNPVARW 297

Query: 68  HICQGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKY 127
           HICQGSINSI+FS DGA+LATVGRDGYLR+FD+  + LVCGGKSYYG LLCC+WSMDGKY
Sbjct: 298 HICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKY 357

Query: 128 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVG 187
           ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDS WSSPNS+ +GE + YRFGSVG
Sbjct: 358 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSGEHVMYRFGSVG 417

Query: 188 QDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPSMR 247
           QDTQLLLW+LEMDEIVVPLRR P       GSPT+S GS S+HWDN +P+GTLQPAP  R
Sbjct: 418 QDTQLLLWDLEMDEIVVPLRRAPG------GSPTYSTGS-SAHWDNVIPMGTLQPAPCKR 470

Query: 248 DVPKISPLVAHRVHTEPLSSLIFTQESVLTACREGHIKIWTRPGVAESQPSNSE-----T 302
           DVPK+SP++AHRVHTEPLS L+FTQESV+TACREGHIKIWTRP  +E+Q ++SE      
Sbjct: 471 DVPKLSPIIAHRVHTEPLSGLMFTQESVVTACREGHIKIWTRPSESETQTNSSEANPTTA 530

Query: 303 LLATSLKE--KPSLSSK-ISNSIYKQ 325
           LL+TS  +  K SLSSK IS S +KQ
Sbjct: 531 LLSTSFTKDNKASLSSKIISGSTFKQ 556


>At2g37160 unknown protein
          Length = 444

 Score =  442 bits (1136), Expect = e-124
 Identities = 220/313 (70%), Positives = 251/313 (79%), Gaps = 32/313 (10%)

Query: 6   NSRCTCISWVPGGDGAFVVAHADGNLYNKDGAGESSFPILKDQTLFSVAHARYSKSNPIA 65
           NSRCT I+WVPGGDG+FV AHADGNLYNK+GA +SSF  ++D T FSV  A+YSKSNP+A
Sbjct: 150 NSRCTSIAWVPGGDGSFVAAHADGNLYNKEGATDSSFSAIRDPTQFSVDKAKYSKSNPVA 209

Query: 66  RWHICQGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDG 125
           RWHI QG+INSI+FS DGAYLATVGRDGYLR+FD++ + LVCG KSYYG LLCCAWSMDG
Sbjct: 210 RWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDG 269

Query: 126 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGS 185
           KY+LTGGEDDLVQVWSMEDRKVVAW EG                     +GE + YRFGS
Sbjct: 270 KYLLTGGEDDLVQVWSMEDRKVVAW-EG---------------------SGENVMYRFGS 307

Query: 186 VGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPS 245
           VGQDTQLLLW+LEMDEIVVPLRR PPG     GSPT+S GSQS+HWDN VP+GTLQPAP 
Sbjct: 308 VGQDTQLLLWDLEMDEIVVPLRR-PPG-----GSPTYSTGSQSAHWDNIVPMGTLQPAPC 361

Query: 246 MRDVPKISPLVAHRVHTEPLSSLIFTQESVLTACREGHIKIWTRPGVAESQPSNSETLLA 305
           MRDVPK+SP+VAHRVHTEPLS LIFTQES++TACREGH+KIWTRP   ++QPS+S     
Sbjct: 362 MRDVPKLSPVVAHRVHTEPLSGLIFTQESLITACREGHLKIWTRP---DTQPSSSSE-AT 417

Query: 306 TSLKEKPSLSSKI 318
                KPSL+SK+
Sbjct: 418 NPTTSKPSLTSKV 430


>At5g52820 Notchless protein homolog
          Length = 473

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 33/132 (25%), Positives = 67/132 (50%), Gaps = 11/132 (8%)

Query: 77  ISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDL 136
           +SFS DG  LA+   D  +R++D   E  +   K +   +L  AWS DGK++++G +   
Sbjct: 115 VSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGE 174

Query: 137 VQVWSMEDRKVVAWG-EGHNSWVSGVAFDS-YWSSPNSNDNGETITYRFGSVGQDTQLLL 194
           +  W+ +  ++      GH  W++G++++  + SSP           RF +  +D    +
Sbjct: 175 ICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSP---------CRRFVTSSKDGDARI 225

Query: 195 WELEMDEIVVPL 206
           W++ + + ++ L
Sbjct: 226 WDITLKKSIICL 237



 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILT 130
           Q  +N + FS DG ++A+   D  +R+++      V   + + G +   +WS D + +L+
Sbjct: 360 QQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLS 419

Query: 131 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDT 190
           G +D  +++W +  +K+     GH   V  V     WS      +GE +     S G+D 
Sbjct: 420 GSKDSTLKIWEIRTKKLKQDLPGHADEVFAVD----WS-----PDGEKVV----SGGKDR 466

Query: 191 QLLLWE 196
            L LW+
Sbjct: 467 VLKLWK 472



 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)

Query: 88  TVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDRKV 147
           T  +DG  R++D T +  +     +   + C  W  DG  I TG +D  +++W     K+
Sbjct: 216 TSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKL 274

Query: 148 VAWGEGHNSWVSGVAFDS 165
           +   +GH  W++ +A  +
Sbjct: 275 IRELKGHGHWINSLALST 292



 Score = 37.7 bits (86), Expect = 0.009
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 116 LLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 163
           +LC ++S DGK + +G  D  V++W +     +   +GH +WV  VA+
Sbjct: 112 VLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159


>At2g43770 putative splicing factor
          Length = 343

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 31/101 (30%), Positives = 46/101 (44%), Gaps = 8/101 (7%)

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFD---YTKEHLVCG-----GKSYYGGLLCCAWS 122
           Q +I  +S S DG+YL T G D  L V+D   Y  ++           ++   LL C+WS
Sbjct: 222 QDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS 281

Query: 123 MDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 163
            DG  +  G  D +V +W    R+ +    GH   V+   F
Sbjct: 282 PDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322



 Score = 37.4 bits (85), Expect = 0.011
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           I ++SFS     + T G D  ++V+D  K       + +   +   + S DG Y+LT G 
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242

Query: 134 DDLVQVWSME----DRKVVAWGEGH 154
           D+ + VW M       + V   EGH
Sbjct: 243 DNKLCVWDMRPYAPQNRCVKIFEGH 267



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 73  SINSISFSADGAYLATVGRDGYL---RVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYIL 129
           ++ ++ F+  G  +A+   D  +   RV    K  +V   K +   +L   W+ DG  I+
Sbjct: 55  AVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVL--KGHKNAILDLHWTSDGSQIV 112

Query: 130 TGGEDDLVQVWSMEDRKVVAWGEGHNSWVS 159
           +   D  V+ W +E  K +     H+S+V+
Sbjct: 113 SASPDKTVRAWDVETGKQIKKMAEHSSFVN 142



 Score = 32.0 bits (71), Expect = 0.47
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 13/70 (18%)

Query: 128 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVG 187
           I TGG D+ V+VW +   +     EGH   ++G++         S D    +T      G
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSL--------SPDGSYLLTN-----G 241

Query: 188 QDTQLLLWEL 197
            D +L +W++
Sbjct: 242 MDNKLCVWDM 251


>At5g23430 unknown protein
          Length = 837

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 13/128 (10%)

Query: 76  SISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDD 135
           S+ F   G + A+   D  L+++D  K+  +   K +  G+    ++ DG+++++GGED+
Sbjct: 106 SVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDN 165

Query: 136 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLW 195
           +V+VW +   K++   + H   +  + F  +              +   +   D  +  W
Sbjct: 166 IVKVWDLTAGKLLTEFKSHEGQIQSLDFHPH-------------EFLLATGSADRTVKFW 212

Query: 196 ELEMDEIV 203
           +LE  E++
Sbjct: 213 DLETFELI 220



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/91 (24%), Positives = 45/91 (49%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           +N + F+ DG ++ + G D  ++V+D T   L+   KS+ G +    +      + TG  
Sbjct: 146 VNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSA 205

Query: 134 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 164
           D  V+ W +E  +++  G    + V  ++F+
Sbjct: 206 DRTVKFWDLETFELIGSGGPETAGVRCLSFN 236



 Score = 35.8 bits (81), Expect = 0.032
 Identities = 35/164 (21%), Positives = 66/164 (39%), Gaps = 25/164 (15%)

Query: 126 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGS 185
           + ++TGGED  V +W++     +    GH+S +  V FD+           E +     +
Sbjct: 30  RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDA----------SEVLVAAGAA 79

Query: 186 VGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPS 245
            G    + LW+LE  +IV  L           G  +         +      G+L     
Sbjct: 80  SG---TIKLWDLEEAKIVRTLT----------GHRSNCISVDFHPFGEFFASGSLDTNLK 126

Query: 246 MRDVPKISPLVAHRVHTEPLSSLIFTQES--VLTACREGHIKIW 287
           + D+ K   +  ++ HT  ++ L FT +   V++   +  +K+W
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170



 Score = 35.0 bits (79), Expect = 0.055
 Identities = 21/73 (28%), Positives = 37/73 (49%), Gaps = 1/73 (1%)

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILT 130
           +G I S+ F      LAT   D  ++ +D     L+  G     G+ C +++ DGK +L 
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLC 244

Query: 131 GGEDDLVQVWSME 143
           G ++ L +++S E
Sbjct: 245 GLQESL-KIFSWE 256



 Score = 32.0 bits (71), Expect = 0.47
 Identities = 24/112 (21%), Positives = 43/112 (37%), Gaps = 13/112 (11%)

Query: 86  LATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDR 145
           L T G D  + ++   K + +     +  G+    +      +  G     +++W +E+ 
Sbjct: 32  LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEA 91

Query: 146 KVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWEL 197
           K+V    GH S    V F  +         GE     F S   DT L +W++
Sbjct: 92  KIVRTLTGHRSNCISVDFHPF---------GEF----FASGSLDTNLKIWDI 130


>At5g08390 katanin p80 subunit - like protein
          Length = 823

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 32/143 (22%), Positives = 66/143 (45%), Gaps = 19/143 (13%)

Query: 76  SISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDD 135
           S++F   G + A+   D  L+++D  K+  +   K +  G+    ++ DG++I++GGED+
Sbjct: 199 SVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDN 258

Query: 136 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLW 195
           +V+VW +   K++   + H   +  + F  +              +   +   D  +  W
Sbjct: 259 VVKVWDLTAGKLLHEFKSHEGKIQSLDFHPH-------------EFLLATGSADKTVKFW 305

Query: 196 ELEMDEIVVPLRRGPPGGSPTFG 218
           +LE  E++        GG+ T G
Sbjct: 306 DLETFELI------GSGGTETTG 322



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 22/91 (24%), Positives = 44/91 (48%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           +N + F+ DG ++ + G D  ++V+D T   L+   KS+ G +    +      + TG  
Sbjct: 239 VNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSA 298

Query: 134 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 164
           D  V+ W +E  +++  G    + V  + F+
Sbjct: 299 DKTVKFWDLETFELIGSGGTETTGVRCLTFN 329



 Score = 34.7 bits (78), Expect = 0.072
 Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 25/164 (15%)

Query: 126 KYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGS 185
           + ++TGGED  V +W++     +    GH+S +  V FD+           E +     +
Sbjct: 123 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDA----------SEGLVAAGAA 172

Query: 186 VGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPS 245
            G    + LW+LE  ++V  L           G  +         +      G+L     
Sbjct: 173 SG---TIKLWDLEEAKVVRTLT----------GHRSNCVSVNFHPFGEFFASGSLDTNLK 219

Query: 246 MRDVPKISPLVAHRVHTEPLSSLIFTQES--VLTACREGHIKIW 287
           + D+ K   +  ++ HT  ++ L FT +   +++   +  +K+W
Sbjct: 220 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 263



 Score = 34.7 bits (78), Expect = 0.072
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILT 130
           +G I S+ F      LAT   D  ++ +D     L+  G +   G+ C  ++ DGK +L 
Sbjct: 278 EGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLC 337

Query: 131 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSN 173
           G ++ L +   M           H    SG   D    + NS+
Sbjct: 338 GLQESLKRTEPMSGG--ATQSNSHPEKTSGSGRDQAGLNDNSS 378



 Score = 32.3 bits (72), Expect = 0.36
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 13/112 (11%)

Query: 86  LATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDR 145
           L T G D  + ++   K + +     +  G+    +      +  G     +++W +E+ 
Sbjct: 125 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEA 184

Query: 146 KVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWEL 197
           KVV    GH S    V F  +         GE     F S   DT L +W++
Sbjct: 185 KVVRTLTGHRSNCVSVNFHPF---------GEF----FASGSLDTNLKIWDI 223


>At1g11160 hypothetical protein
          Length = 974

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 29/133 (21%), Positives = 63/133 (46%), Gaps = 13/133 (9%)

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILT 130
           + + +++ F   G +LA+   D  LRV+D  K+  +   K +  G+    +S DG+++++
Sbjct: 49  RSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVS 108

Query: 131 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDT 190
           GG D++V+VW +   K++   + H   +  + F               + +   +   D 
Sbjct: 109 GGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF-------------HPLEFLLATGSADR 155

Query: 191 QLLLWELEMDEIV 203
            +  W+LE  E++
Sbjct: 156 TVKFWDLETFELI 168



 Score = 38.1 bits (87), Expect = 0.007
 Identities = 23/90 (25%), Positives = 43/90 (47%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           I++I FS DG ++ + G D  ++V+D T   L+   K + G +    +      + TG  
Sbjct: 94  ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSA 153

Query: 134 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 163
           D  V+ W +E  +++       + V  +AF
Sbjct: 154 DRTVKFWDLETFELIGTTRPEATGVRAIAF 183



 Score = 33.9 bits (76), Expect = 0.12
 Identities = 39/170 (22%), Positives = 62/170 (35%), Gaps = 25/170 (14%)

Query: 120 AWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETI 179
           A++ +   +L G    ++++W +E+ K+V    GH S  S V F  +         GE +
Sbjct: 14  AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF---------GEFL 64

Query: 180 TYRFGSVGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGT 239
                S   DT L +W+      +   +    G S    SP          W   V  G 
Sbjct: 65  ----ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP-------DGRW---VVSGG 110

Query: 240 LQPAPSMRDVPKISPLVAHRVHTEPLSSLIFTQESVL--TACREGHIKIW 287
           L     + D+     L   + H  P+ SL F     L  T   +  +K W
Sbjct: 111 LDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 160


>At1g71840 unknown protein (At1g71840)
          Length = 407

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 25/83 (30%), Positives = 41/83 (49%)

Query: 73  SINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGG 132
           S++ ++FS DG  LA+ G DG +++FD +   L C       G+    W   G  +L G 
Sbjct: 115 SVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGS 174

Query: 133 EDDLVQVWSMEDRKVVAWGEGHN 155
           ED  + +W+ +    +    GHN
Sbjct: 175 EDCSLWMWNADKEAYLNMFSGHN 197



 Score = 35.8 bits (81), Expect = 0.032
 Identities = 33/123 (26%), Positives = 55/123 (43%), Gaps = 13/123 (10%)

Query: 79  FSADGAYLATVGRDGYLRVFD---YTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDD 135
           F+ DG  + T   D  L V++       H+V G   +  GL C   + +    ++G +D 
Sbjct: 205 FTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDG 264

Query: 136 LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLW 195
            V + ++   KVV+    H   V  V F     SP+S     TI     + G D +L++W
Sbjct: 265 SVHIVNIVTGKVVSSLNSHTDSVECVKF-----SPSS----ATIPLA-ATGGMDKKLIIW 314

Query: 196 ELE 198
           +L+
Sbjct: 315 DLQ 317



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 23/95 (24%), Positives = 38/95 (39%), Gaps = 8/95 (8%)

Query: 73  SINSISFSADGAYL---ATVGRDGYLRVFD--YTKEHLVCGGKSYYGGLLCCAWSMDGKY 127
           S+  + FS   A +   AT G D  L ++D  ++    +C    +  G+    W    KY
Sbjct: 286 SVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFIC---EHEEGVTSLTWIGTSKY 342

Query: 128 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVA 162
           + TG  +  V +W       V    GH   V  ++
Sbjct: 343 LATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAIS 377



 Score = 28.1 bits (61), Expect = 6.7
 Identities = 19/60 (31%), Positives = 24/60 (39%), Gaps = 2/60 (3%)

Query: 104 HLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 163
           H   G K     L C     D   + TGG DD   +W + +    A   GH   VS +AF
Sbjct: 64  HTFTGHKGELYALACSP--TDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAF 121


>At3g18130 protein kinase C-receptor/G-protein, putative
          Length = 326

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 13/127 (10%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           +  +  S+DG +  +   DG LR++D            +   +L  A+S D + I++   
Sbjct: 66  VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASR 125

Query: 134 DDLVQVWSM--EDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQ 191
           D  +++W+   E +  ++ G+GH  WVS V F     SPN      T+     S   D  
Sbjct: 126 DRTIKLWNTLGECKYTISEGDGHKEWVSCVRF-----SPN------TLVPTIVSASWDKT 174

Query: 192 LLLWELE 198
           + +W L+
Sbjct: 175 VKVWNLQ 181



 Score = 38.1 bits (87), Expect = 0.007
 Identities = 20/81 (24%), Positives = 41/81 (49%), Gaps = 10/81 (12%)

Query: 72  GSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYY----GGLLCCAWSMDGKY 127
           G +N+++ S DG+  A+ G+DG + ++D  +      GK  Y    G ++        +Y
Sbjct: 194 GYLNTVAVSPDGSLCASGGKDGVILLWDLAE------GKKLYSLEAGSIIHSLCFSPNRY 247

Query: 128 ILTGGEDDLVQVWSMEDRKVV 148
            L    ++ +++W +E + VV
Sbjct: 248 WLCAATENSIRIWDLESKSVV 268



 Score = 35.0 bits (79), Expect = 0.055
 Identities = 31/138 (22%), Positives = 65/138 (46%), Gaps = 17/138 (12%)

Query: 76  SISFSADGAYLATVGRDGYLRVFDYTKE--HLVCGGKSYYGGLLCCAWSMDGKY--ILTG 131
           S++FS D   + +  RD  +++++   E  + +  G  +   + C  +S +     I++ 
Sbjct: 110 SVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSA 169

Query: 132 GEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQ 191
             D  V+VW++++ K+     GH+ +++ VA      SP+ +           S G+D  
Sbjct: 170 SWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAV-----SPDGS--------LCASGGKDGV 216

Query: 192 LLLWELEMDEIVVPLRRG 209
           +LLW+L   + +  L  G
Sbjct: 217 ILLWDLAEGKKLYSLEAG 234



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 30/124 (24%), Positives = 46/124 (36%), Gaps = 18/124 (14%)

Query: 122 SMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITY 181
           S DG++ L+G  D  +++W +   +      GH   V  VAF        S DN + +  
Sbjct: 72  SSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAF--------STDNRQIV-- 121

Query: 182 RFGSVGQDTQLLLWELEMDEIVVPLRRGPPG----GSPTFGSPTFSAGSQSSHWDNAVPL 237
              S  +D  + LW   + E    +  G           F   T      S+ WD  V +
Sbjct: 122 ---SASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177

Query: 238 GTLQ 241
             LQ
Sbjct: 178 WNLQ 181


>At1g61210 
          Length = 282

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/133 (19%), Positives = 63/133 (46%), Gaps = 13/133 (9%)

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILT 130
           + + +++ F   G +LA+   D  L+++D  K+  +   K +  G+    ++ DG+++++
Sbjct: 130 RSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVS 189

Query: 131 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDT 190
           GG D++V+VW +   K++   + H   +  + F               + +   +   D 
Sbjct: 190 GGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDF-------------HPLEFLLATGSADR 236

Query: 191 QLLLWELEMDEIV 203
            +  W+LE  E++
Sbjct: 237 TVKFWDLETFELI 249



 Score = 31.2 bits (69), Expect = 0.80
 Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 25/162 (15%)

Query: 128 ILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVG 187
           +L G    ++++W +E+ K+V    GH S  S V F  +         GE +     S  
Sbjct: 103 VLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPF---------GEFL----ASGS 149

Query: 188 QDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPSMR 247
            D  L +W++     +   +    G S    +P          W   V  G L     + 
Sbjct: 150 SDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP-------DGRW---VVSGGLDNVVKVW 199

Query: 248 DVPKISPLVAHRVHTEPLSSLIFTQESVL--TACREGHIKIW 287
           D+     L   + H  P+ SL F     L  T   +  +K W
Sbjct: 200 DLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFW 241



 Score = 28.5 bits (62), Expect = 5.2
 Identities = 35/174 (20%), Positives = 68/174 (38%), Gaps = 35/174 (20%)

Query: 126 KYILTGGEDDLVQVWSM--------EDRKVVAWGE--GHNSWVSGVAFDSYWSSPNSNDN 175
           +  +TGG+D  V +W++         D     W    GH S V  VAFDS          
Sbjct: 49  RLFITGGDDYKVNLWAIGKPTSLMKNDAIAFYWQSLCGHTSAVDSVAFDS---------- 98

Query: 176 GETITYRFGSVGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAV 235
            E +     S G    + LW++E  ++V              G  +  +  +   +   +
Sbjct: 99  AEVLVLAGASSG---VIKLWDVEEAKMVRAFT----------GHRSNCSAVEFHPFGEFL 145

Query: 236 PLGTLQPAPSMRDVPKISPLVAHRVHTEPLSSLIFTQES--VLTACREGHIKIW 287
             G+      + D+ K   +  ++ H+  +S++ FT +   V++   +  +K+W
Sbjct: 146 ASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVW 199


>At2g41500 putative U4/U6 small nuclear ribonucleoprotein
          Length = 554

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 25/92 (27%), Positives = 46/92 (49%)

Query: 73  SINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGG 132
           S+  I+F  DGA  A+ G D   RV+D      +   + +   +    +S +G ++ +GG
Sbjct: 383 SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGG 442

Query: 133 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 164
           ED+  ++W +  RK +     H + VS V ++
Sbjct: 443 EDNQCRIWDLRMRKSLYIIPAHANLVSQVKYE 474



 Score = 35.4 bits (80), Expect = 0.042
 Identities = 39/174 (22%), Positives = 77/174 (43%), Gaps = 8/174 (4%)

Query: 29  GNLYNKDGAGESSFPILKDQTLFSVAHARYSKSNPIARWHICQGSINSISFSADGAYLAT 88
           G  + +DGA  +S  +    +L  V   R  +S  + + HI    + S++FS +G +LA+
Sbjct: 386 GIAFQQDGALAASCGL---DSLARVWDLRTGRSILVFQGHI--KPVFSVNFSPNGYHLAS 440

Query: 89  VGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWS-MDGKYILTGGEDDLVQVWSMEDRKV 147
            G D   R++D      +    ++   +    +   +G ++ T   D  V +WS  D  +
Sbjct: 441 GGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSL 500

Query: 148 VAWGEGHNSWVSG--VAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWELEM 199
           V    GH S V+   +  DS   +  S+D    +    G+  +D +    ++++
Sbjct: 501 VKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL 554



 Score = 35.0 bits (79), Expect = 0.055
 Identities = 57/262 (21%), Positives = 93/262 (34%), Gaps = 50/262 (19%)

Query: 77  ISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDL 136
           + FS     LAT   D   +++  T   L+   + +   L   A+   GKY+ T   D  
Sbjct: 304 VVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKT 362

Query: 137 VQVWSMEDRKVVAWGEGHNSWVSGVAFDS---------------YWS------------- 168
            ++W +     +   EGH+  V G+AF                  W              
Sbjct: 363 WRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGH 422

Query: 169 -----SPNSNDNGETITYRFGSVGQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFS 223
                S N + NG    Y   S G+D Q  +W+L M + +  +       S     P   
Sbjct: 423 IKPVFSVNFSPNG----YHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEG 478

Query: 224 AGSQSSHWDNAVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSSLIFTQES--VLTACRE 281
               ++ +D  V +       S RD   +  L  H      ++SL  T +S  + T   +
Sbjct: 479 YFLATASYDMKVNIW------SGRDFSLVKSLAGHE---SKVASLDITADSSCIATVSHD 529

Query: 282 GHIKIWTRPGVAESQPSNSETL 303
             IK+WT  G  + +    ET+
Sbjct: 530 RTIKLWTSSG-NDDEDEEKETM 550


>At5g50230 putative protein
          Length = 515

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 27/82 (32%), Positives = 38/82 (45%), Gaps = 6/82 (7%)

Query: 73  SINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSM-----DGKY 127
           ++ S+S S +G  + T GRD    VFD T+   +CG     G  L   WS      D  Y
Sbjct: 401 AVTSVSLSRNGNRILTSGRDNVHNVFD-TRTLEICGTLRASGNRLASNWSRSCISPDDDY 459

Query: 128 ILTGGEDDLVQVWSMEDRKVVA 149
           +  G  D  V VWS+    +V+
Sbjct: 460 VAAGSADGSVHVWSLSKGNIVS 481



 Score = 38.1 bits (87), Expect = 0.007
 Identities = 19/62 (30%), Positives = 32/62 (50%)

Query: 80  SADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQV 139
           S D  Y+A    DG + V+  +K ++V   K     +LCC+WS  GK + +  ++  V  
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 513

Query: 140 WS 141
           W+
Sbjct: 514 WT 515



 Score = 35.0 bits (79), Expect = 0.055
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 66  RWHICQGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGL---LCCAWS 122
           R H  +G   SI F  +   L T G+D  ++++D     L+   KS YG L   L  A +
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLI---KSLYGSLGNILDMAVT 282

Query: 123 MDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWS 168
            D K ++     + + VW +   +V     GH   V  V    + S
Sbjct: 283 HDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSS 328



 Score = 32.0 bits (71), Expect = 0.47
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 9/133 (6%)

Query: 75  NSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGED 134
           N+I  S DG  + +   DG LR++D     L+     +   +   + S +G  ILT G D
Sbjct: 361 NAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420

Query: 135 DLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLL 194
           ++  V+     ++           SG    S WS    + + + +     +   D  + +
Sbjct: 421 NVHNVFDTRTLEICG-----TLRASGNRLASNWSRSCISPDDDYV----AAGSADGSVHV 471

Query: 195 WELEMDEIVVPLR 207
           W L    IV  L+
Sbjct: 472 WSLSKGNIVSILK 484


>At5g14050 unknown protein
          Length = 546

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 30/106 (28%), Positives = 48/106 (44%), Gaps = 3/106 (2%)

Query: 51  FSVAHARYSKSNPIARWHICQGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGK 110
           F +  A++ K  P+      + S+     S D   +A VG +GY+ +   TK   + G  
Sbjct: 315 FDLEKAKFDKIGPLVGRE--EKSLEYFEVSQDSNTIAFVGNEGYILLVS-TKTKELIGTL 371

Query: 111 SYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNS 156
              G +   A+S DGK++L+ G D  V VW +   K +  G    S
Sbjct: 372 KMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGS 417


>At2g20330 putative WD-40 repeat protein
          Length = 648

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 27/211 (12%)

Query: 12  ISWVP-GGDGAFVVAHADGNLYNKDGAGESSFPILKDQTLFSVAHARYSKSNPIARWHIC 70
           +SW P  G    V   A   ++++DG     F          +    Y +     + HIC
Sbjct: 230 VSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEF----------MKGDMYIRDLKNTKGHIC 279

Query: 71  QGSINSISFSADGAYLATVGRDGYLRVFD---YTKEHLVCGGKSYYGG---LLCCAWSMD 124
             +            L T   DG LR++D   +  +  V   K    G   +  CAW  D
Sbjct: 280 GLTCGEWHPRTKETVL-TSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRD 338

Query: 125 GKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFG 184
           GK I  G  D  +Q+WS++      WG   + +V     D   S   S+D    ++  F 
Sbjct: 339 GKRIAGGVGDGSIQIWSLKP----GWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSF- 393

Query: 185 SVGQDTQLLLWELEMDEIVVPLRRGPPGGSP 215
               D  L +W+L   +  + +  G P   P
Sbjct: 394 ----DGSLKVWDLRQMKEALKVFEGLPNYYP 420


>At5g25150 transcription initiation factor IID-associated
           factor-like protein
          Length = 700

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 27/108 (25%), Positives = 50/108 (46%)

Query: 56  ARYSKSNPIARWHICQGSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGG 115
           AR    + I    I  G ++ + +  +  Y+AT   D  +R++D      V     +   
Sbjct: 484 ARIWSMDRIQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSM 543

Query: 116 LLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 163
           +L  A S DG+Y+ +G ED  + +W +   + +    GHNS V  +++
Sbjct: 544 VLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSY 591



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 16/128 (12%)

Query: 79  FSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQ 138
           FS  G Y A+   D   R++   +   +   +   G L    W  +  YI TG  D  V+
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPL---RIMAGHLSDVDWHPNCNYIATGSSDKTVR 524

Query: 139 VWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWELE 198
           +W ++  + V    GH S V  +A      SP+             S  +D  +++W+L 
Sbjct: 525 LWDVQTGECVRIFIGHRSMVLSLAM-----SPDGR--------YMASGDEDGTIMMWDLS 571

Query: 199 MDEIVVPL 206
               + PL
Sbjct: 572 TARCITPL 579



 Score = 28.5 bits (62), Expect = 5.2
 Identities = 31/158 (19%), Positives = 57/158 (35%), Gaps = 40/158 (25%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTK-----------------EHLVCGGKSYY--- 113
           +N  S S DG+ +A    D  ++V+D  K                 + +   G+  Y   
Sbjct: 355 LNCSSISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLL 414

Query: 114 ----GGLLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSS 169
               G +    +S  G ++L+   D  +++WS +    +   +GHN  V    F  +   
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPF--- 471

Query: 170 PNSNDNGETITYRFGSVGQDTQLLLWELEMDEIVVPLR 207
                      + F S   D    +W ++    + PLR
Sbjct: 472 ----------GHYFASCSHDRTARIWSMDR---IQPLR 496


>At4g05410 U3 snoRNP-associated -like protein
          Length = 504

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 76  SISFSADGAYLATVGRDGYLRVFDY-TKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGED 134
           +++ S+DG YLAT G D ++ ++D  T+EH V     +   + C  +      + +G  D
Sbjct: 227 ALAVSSDGRYLATGGVDRHVHIWDVRTREH-VQAFPGHRNTVSCLCFRYGTSELYSGSFD 285

Query: 135 DLVQVWSMEDRKVVAWGEGHNSWVSGV 161
             V+VW++ED+  +    GH   +  +
Sbjct: 286 RTVKVWNVEDKAFITENHGHQGEILAI 312



 Score = 38.1 bits (87), Expect = 0.007
 Identities = 19/47 (40%), Positives = 26/47 (54%)

Query: 117 LCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 163
           L  A S DG+Y+ TGG D  V +W +  R+ V    GH + VS + F
Sbjct: 226 LALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272


>At5g67320 unknown protein
          Length = 613

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 50/245 (20%), Positives = 88/245 (35%), Gaps = 32/245 (13%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           + ++ ++ +G  LAT   DG  R++    E L+     + G +    W+  G Y+LTG  
Sbjct: 327 VTTLDWNGEGTLLATGSCDGQARIWTLNGE-LISTLSKHKGPIFSLKWNKKGDYLLTGSV 385

Query: 134 DDLVQVWSMEDRKVVAWGEGHN------SWVSGVAFDS-------YWSSPNSNDNGETIT 180
           D    VW ++  +     E H+       W + V+F +       Y          +T T
Sbjct: 386 DRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFT 445

Query: 181 YRFGSV---------------GQDTQLLLWELEMDEIVVPLRRGPPGGSPTFGSPTFSAG 225
              G V                 D+   +W ++    V  LR           SPT   G
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPT-GPG 504

Query: 226 SQSSHWDNAVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSSLIFTQ--ESVLTACREGH 283
           + + +    +   +      + D      L +   H EP+ SL F+   E + +   +  
Sbjct: 505 TNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKS 564

Query: 284 IKIWT 288
           I IW+
Sbjct: 565 IHIWS 569



 Score = 37.4 bits (85), Expect = 0.011
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 86  LATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDR 145
           LA+   D  ++++D     ++C    +   +   A+S +G+YI +G  D  + +WS+++ 
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573

Query: 146 KVVAWGEGHNSWVSGVAFDSYWS 168
           K+V    G     +G  F+  W+
Sbjct: 574 KIVKTYTG-----NGGIFEVCWN 591



 Score = 29.3 bits (64), Expect = 3.0
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 119 CAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSND---- 174
           CAWS     + +G  D   ++WS+ +    A   G N     +      S+  S D    
Sbjct: 271 CAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVTTL 330

Query: 175 --NGETITYRFGSVGQDTQLLLWELEMDEI-VVPLRRGP 210
             NGE      GS   D Q  +W L  + I  +   +GP
Sbjct: 331 DWNGEGTLLATGSC--DGQARIWTLNGELISTLSKHKGP 367


>At1g18080   putative guanine nucleotide-binding protein beta
           subunit
          Length = 327

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 37/157 (23%), Positives = 63/157 (39%), Gaps = 23/157 (14%)

Query: 44  ILKDQTLFSVAHARYSKSNPIARWHICQGSINSISFSADGAYLATVGRDGYLRVFDYTKE 103
           + KD   + VA  R +  +           +  +  S+DG +  +   DG LR++D    
Sbjct: 45  LTKDDKAYGVAQRRLTGHSHF---------VEDVVLSSDGQFALSGSWDGELRLWDLAAG 95

Query: 104 HLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDR---KVVAWGEGHNSWVSG 160
                   +   +L  A+S+D + I++   D  +++W+        +   GEGH  WVS 
Sbjct: 96  VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 155

Query: 161 VAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWEL 197
           V F     SPN      T+     S   D  + +W L
Sbjct: 156 VRF-----SPN------TLQPTIVSASWDKTVKVWNL 181



 Score = 37.0 bits (84), Expect = 0.015
 Identities = 32/127 (25%), Positives = 61/127 (47%), Gaps = 18/127 (14%)

Query: 76  SISFSADGAYLATVGRDGYLRVFDYTKE---HLVCGGKSYYGGLLCCAWSMDGKY--ILT 130
           S++FS D   + +  RD  +++++   E    +  GG+ +   + C  +S +     I++
Sbjct: 110 SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVS 169

Query: 131 GGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDT 190
              D  V+VW++ + K+ +   GH  +VS VA      SP+ +           S G+D 
Sbjct: 170 ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV-----SPDGS--------LCASGGKDG 216

Query: 191 QLLLWEL 197
            +LLW+L
Sbjct: 217 VVLLWDL 223



 Score = 32.0 bits (71), Expect = 0.47
 Identities = 17/81 (20%), Positives = 39/81 (47%), Gaps = 10/81 (12%)

Query: 72  GSINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYY----GGLLCCAWSMDGKY 127
           G +++++ S DG+  A+ G+DG + ++D  +      GK  Y      ++        +Y
Sbjct: 195 GYVSTVAVSPDGSLCASGGKDGVVLLWDLAE------GKKLYSLEANSVIHALCFSPNRY 248

Query: 128 ILTGGEDDLVQVWSMEDRKVV 148
            L    +  +++W +E + +V
Sbjct: 249 WLCAATEHGIKIWDLESKSIV 269


>At5g16750 WD40-repeat protein
          Length = 876

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 27/164 (16%)

Query: 47  DQTLFSVAHARYSKS------NPIARWHICQGSINSISFSADGAYLATVGRDGYLRVFDY 100
           D+ LFS  H+R  +         I  W   +G +  ++  A G  LAT G D  + V+D 
Sbjct: 72  DKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131

Query: 101 TK---EHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSME----DRKVVAWGEG 153
                 H   G K     +L    S +   +++G +D  V+VW +     ++K +A  E 
Sbjct: 132 DGGFCTHYFRGHKGVVSSILFHPDS-NKNILISGSDDATVRVWDLNAKNTEKKCLAIMEK 190

Query: 154 HNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWEL 197
           H S V+ +A          +++G T+     S G+D  + LW+L
Sbjct: 191 HFSAVTSIAL---------SEDGLTLF----SAGRDKVVNLWDL 221



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 46/210 (21%), Positives = 84/210 (39%), Gaps = 21/210 (10%)

Query: 85  YLATVGRDGYLRVFDYTK---EHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQVWS 141
           +LA       +RV+D       +++ G K     L  C  S     I+TG +D  V++W+
Sbjct: 373 FLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWN 432

Query: 142 MEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLLLWELE--M 199
              +  +  G GHN  +  VAF             ++ ++ F S   D  L +W L+   
Sbjct: 433 ATSKSCIGVGTGHNGDILAVAFAK-----------KSFSF-FVSGSGDRTLKVWSLDGIS 480

Query: 200 DEIVVPLRRGPPGGSPTFGSPTFSAGSQSSHWDNAVPLGTLQPAPSMRDVPKISPLVAHR 259
           ++   P+                S     +  D+ V  G+     S+  +P +  +V  +
Sbjct: 481 EDSEEPINLKTRSVVAAHDKDINSVAVARN--DSLVCTGSEDRTASIWRLPDLVHVVTLK 538

Query: 260 VHTEPLSSLIFT--QESVLTACREGHIKIW 287
            H   + S+ F+   + V+TA  +  +KIW
Sbjct: 539 GHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 5/103 (4%)

Query: 73  SINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGG 132
           ++ +++ S D   L + G    +RV+D      +   K + G ++  A    G  + T G
Sbjct: 62  TLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAG 121

Query: 133 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDN 175
            D  V VW ++      +  GH   VS + F      P+SN N
Sbjct: 122 ADRKVLVWDVDGGFCTHYFRGHKGVVSSILF-----HPDSNKN 159



 Score = 32.7 bits (73), Expect = 0.27
 Identities = 28/130 (21%), Positives = 51/130 (38%), Gaps = 13/130 (10%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           INS++ + + + + T   D    ++       V   K +   +    +S   + ++T   
Sbjct: 502 INSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASG 561

Query: 134 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETITYRFGSVGQDTQLL 193
           D  V++W++ D   +   EGH S V   +F              T   +F S G D  L 
Sbjct: 562 DKTVKIWAISDGSCLKTFEGHTSSVLRASF-------------ITDGTQFVSCGADGLLK 608

Query: 194 LWELEMDEIV 203
           LW +   E +
Sbjct: 609 LWNVNTSECI 618



 Score = 32.3 bits (72), Expect = 0.36
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 18/145 (12%)

Query: 71  QGSINSISFSADGA--YLATVGRDGYLRVFDY----TKEHLVCGGKSYYGGLLCCAWSMD 124
           +G ++SI F  D     L +   D  +RV+D     T++  +   + ++  +   A S D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203

Query: 125 GKYILTGGEDDLVQVWSMEDRKVVAWG------EGHNSWVSGVAFDSYWSS-----PNSN 173
           G  + + G D +V +W + D    A        E   +  SG  F S+ +S         
Sbjct: 204 GLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKKK 263

Query: 174 DNGETITYRFGSVGQDTQLLLWELE 198
           ++    TY F +VG+   + +W+ E
Sbjct: 264 ESDSQATY-FITVGERGVVRIWKSE 287



 Score = 31.6 bits (70), Expect = 0.61
 Identities = 16/68 (23%), Positives = 29/68 (42%)

Query: 73  SINSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGG 132
           S+   SF  DG    + G DG L++++      +     +   +   A     + I TGG
Sbjct: 585 SVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGG 644

Query: 133 EDDLVQVW 140
            D ++ +W
Sbjct: 645 GDAVINLW 652



 Score = 28.1 bits (61), Expect = 6.7
 Identities = 17/89 (19%), Positives = 41/89 (45%)

Query: 74  INSISFSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGE 133
           I S+ FS     + T   D  ++++  +    +   + +   +L  ++  DG   ++ G 
Sbjct: 544 IFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA 603

Query: 134 DDLVQVWSMEDRKVVAWGEGHNSWVSGVA 162
           D L+++W++   + +A  + H   V  +A
Sbjct: 604 DGLLKLWNVNTSECIATYDQHEDKVWALA 632


>At2g47410 putative WD-40 repeat protein
          Length = 1389

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query: 110 KSYYGGLLCCAWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDS 165
           + +   + C  +   G+Y++TG +D LV++WSME    +A   GH   ++ +A  S
Sbjct: 233 RGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 288



 Score = 34.3 bits (77), Expect = 0.094
 Identities = 17/85 (20%), Positives = 37/85 (43%)

Query: 79  FSADGAYLATVGRDGYLRVFDYTKEHLVCGGKSYYGGLLCCAWSMDGKYILTGGEDDLVQ 138
           F   G Y+ T   D  ++++       +   + + G +   A S +   + +   D +++
Sbjct: 244 FDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIR 303

Query: 139 VWSMEDRKVVAWGEGHNSWVSGVAF 163
           VW + D   ++   GH   V+ +AF
Sbjct: 304 VWRLPDGMPISVLRGHTGAVTAIAF 328



 Score = 29.6 bits (65), Expect = 2.3
 Identities = 21/88 (23%), Positives = 37/88 (41%), Gaps = 18/88 (20%)

Query: 116 LLCCAWSMDGKYILTGGEDD------LVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSS 169
           +LCCA++ +G   +TG  D        + VW+  D  +V    GH+   S    D +  +
Sbjct: 394 ILCCAYNANGTIFVTGSSDSNARVYCRICVWNAADGSLVHCLTGHSE--SSYVLDVHPFN 451

Query: 170 PNSNDNGETITYRFGSVGQDTQLLLWEL 197
           P              S G D + ++W++
Sbjct: 452 PRI----------AMSAGYDGKTIIWDI 469


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.316    0.133    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,660,610
Number of Sequences: 26719
Number of extensions: 416705
Number of successful extensions: 1568
Number of sequences better than 10.0: 170
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 1068
Number of HSP's gapped (non-prelim): 476
length of query: 325
length of database: 11,318,596
effective HSP length: 100
effective length of query: 225
effective length of database: 8,646,696
effective search space: 1945506600
effective search space used: 1945506600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)