BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148918.3 + phase: 0
(1351 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48710 hypothetical protein 1353 0.0
At3g61330 copia-type polyprotein 1347 0.0
At1g58140 hypothetical protein 1337 0.0
At3g59720 copia-type reverse transcriptase-like protein 1205 0.0
At3g60170 putative protein 1149 0.0
At1g32590 hypothetical protein, 5' partial 1035 0.0
At2g15650 putative retroelement pol polyprotein 986 0.0
At2g05390 putative retroelement pol polyprotein 865 0.0
At3g25450 hypothetical protein 843 0.0
At1g37110 666 0.0
At2g21460 putative retroelement pol polyprotein 665 0.0
At5g35820 copia-like retrotransposable element 650 0.0
At2g16000 putative retroelement pol polyprotein 624 e-179
At4g21360 putative transposable element 618 e-177
At2g20460 putative retroelement pol polyprotein 612 e-175
At4g10460 putative retrotransposon 610 e-174
At1g70010 hypothetical protein 585 e-167
At4g17450 retrotransposon like protein 574 e-163
At4g03810 putative retrotransposon protein 571 e-163
At1g26990 polyprotein, putative 559 e-159
>At1g48710 hypothetical protein
Length = 1352
Score = 1353 bits (3502), Expect = 0.0
Identities = 690/1374 (50%), Positives = 931/1374 (67%), Gaps = 63/1374 (4%)
Query: 7 NIVWSGPKLNSELDFNYWEFMMTTHLKAHNIWSYVESGLQQGADELA------------R 54
N+ + P L +++ W M L AH++W VE G + +E + R
Sbjct: 5 NVPFQVPVLTKS-NYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSR 63
Query: 55 RRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERY 114
+RD+ AL I QG+D F K+ A ++KEAW+ L+ S+KG ++ +K +LQ+LR E+E
Sbjct: 64 KRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEAL 123
Query: 115 EMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTD 174
+M E V YF+RV+ + N ++ GE + D +++EK+LR++ +K++H+VT I E+ D +
Sbjct: 124 QMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLE 183
Query: 175 TLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRG 234
+++ +L GS++++ E+ +K KE+ ++ +N+ E + ++ G G
Sbjct: 184 AMTIEQLLGSLQAY-----EEKKKKKEDIIEQVLNMQITKEENGQ-------SYQRRGGG 231
Query: 235 NFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNN-RGRGRGYYNQ--ER 291
RGRGRG + G GRG WR + N N G N+ RGRG+G+ ++
Sbjct: 232 QVRGRGRGGY-GNGRG----WRPHEDNT----------NQRGENSSRGRGKGHPKSRYDK 276
Query: 292 TNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQNQHSLFLASNTLSEEE--NIW 349
++ C+NCGK+GH A++C+ E + + E Q + L +AS E+E + W
Sbjct: 277 SSVKCYNCGKFGHYASECKAPSNKKFEEKA-NYVEEKIQEEDMLLMASYKKDEQEENHKW 335
Query: 350 YLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVF 409
YLD+G SNHMCG+K +F+ LDE+V+ V G+ S + ++GKG I IRLK+G FI +V+
Sbjct: 336 YLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVY 395
Query: 410 YAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFS 469
Y P + N+LS+GQL EK Y++++ ++ D ITKV MS NR+F L I++D
Sbjct: 396 YIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQ 455
Query: 470 CLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESF 529
CL + WLWH+RFGH +F GL LSRKE V GLP + P+ VCE C +GK+ + SF
Sbjct: 456 CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSF 515
Query: 530 PTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSF 588
P S RA+K LE++H+D+C ++ + G YF+ FIDDFSRK WVYFLK+KSE + F
Sbjct: 516 PKESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIF 575
Query: 589 KTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKN 646
K FKA VEK+SG IK +R+DRG E+ + E +GI+ QLT +PQQNGVAERKN
Sbjct: 576 KKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKN 635
Query: 647 RTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLR 706
RTI++M R MLK+K++PKE WAEAVA AVY+LNR PTKSV KTP+EA SGR+ + HLR
Sbjct: 636 RTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLR 695
Query: 707 VFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGM 766
VFG IA+AHVPD+ R KLDDK E+ IFIGY +NSK YKLYNP+TKK IISR++ FDE G
Sbjct: 696 VFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGE 755
Query: 767 WNWSSKSQKEPIVTPNDYEEEDEHVDTTP--DEPDEPETSN-----REKRNRRLPA--RL 817
W+W+S ++++ P+ E+E E P +EP P TS E + R P +
Sbjct: 756 WDWNS-NEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSI 814
Query: 818 QDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTWELTE 877
Q+ T+N E + F LFA+CEP+ F+EA + W AMDEEI +I+KN TWELT
Sbjct: 815 QELYEVTENQ---ENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 878 LPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRML 937
LP K IGVKWVYK K GE++RYKARLVAKGY Q+ GIDY EVFAPVARL+T+R++
Sbjct: 872 LPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLI 931
Query: 938 ISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAP 997
ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQP GY+V+G+EDKV RLKKALYGLKQAP
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAP 991
Query: 998 RAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRG 1057
RAW +ID YF + F +CP+EH LYIK I D+LI CLYVDDLIFTGNN M EF+
Sbjct: 992 RAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKEDILIACLYVDDLIFTGNNPSMFEEFKK 1050
Query: 1058 AMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKL 1117
M FEMTD+GLMSY+LGIEV Q+ +GIFI+Q+ YA ++LKKFKM+ S P+ TP+E +
Sbjct: 1051 EMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGI 1110
Query: 1118 KLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILR 1177
KL+++ +G+ VD T +KSL+GSLRYLT TRPDI+Y VG++SRYME P +H + AKRILR
Sbjct: 1111 KLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILR 1170
Query: 1178 YIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVV 1237
YIKGT+ G+ Y SD KLVGY+DSDW GD + RKSTSG+ F++G A +W SKKQ +V
Sbjct: 1171 YIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIV 1230
Query: 1238 ALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSK 1297
LST EAEY+ ATSC +WLR +L+ + Q PTKI+ DNKSAIAL+KNPVFH RSK
Sbjct: 1231 VLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSK 1290
Query: 1298 HIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMKA 1351
HID R+H IRE +++K+V +EY T +Q+ADIFTKPLK E F K++ +LG+ K+
Sbjct: 1291 HIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKS 1344
>At3g61330 copia-type polyprotein
Length = 1352
Score = 1347 bits (3485), Expect = 0.0
Identities = 686/1374 (49%), Positives = 927/1374 (66%), Gaps = 63/1374 (4%)
Query: 7 NIVWSGPKLNSELDFNYWEFMMTTHLKAHNIWSYVESGLQQGADELA------------R 54
N+ + P L +++ W M L AH++W VE G + +E + R
Sbjct: 5 NVPFQVPVLTKS-NYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSR 63
Query: 55 RRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERY 114
+RD+ AL I QG+D F K+ A ++KEAW+ L+ S+KG ++ +K +LQ+LR E+E
Sbjct: 64 KRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEAL 123
Query: 115 EMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTD 174
+M E V YF+RV+ + N ++ GE + D +++EK+LR++ +K++H+VT I E+ D +
Sbjct: 124 QMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLE 183
Query: 175 TLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRG 234
+++ +L GS++++ + +K E + E+ L Q+ +S Q G G
Sbjct: 184 AMTIEQLLGSLQAYEEK-KKKKEDIAEQVLNMQITKEENGQSYQ-----------RRGGG 231
Query: 235 NFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNN-RGRGRGYYNQ--ER 291
RGRGRG + G GRG WR + N N G N+ RGRG+G+ ++
Sbjct: 232 QVRGRGRGGY-GNGRG----WRPHEDNT----------NQRGENSSRGRGKGHPKSRYDK 276
Query: 292 TNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQNQHSLFLASNTLSE--EENIW 349
++ C+NCGK+GH A++C+ E ++ + E Q + L +AS E E + W
Sbjct: 277 SSVKCYNCGKFGHYASECKAPSNKKFEEKAH-YVEEKIQEEDMLLMASYKKDEQKENHKW 335
Query: 350 YLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVF 409
YLD+G SNHMCG+K +F+ LDE+V+ V G+ S + ++GKG I IRLK+G FI +V+
Sbjct: 336 YLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVY 395
Query: 410 YAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFS 469
Y P + N+LS+GQL EK Y++++ ++ D ITKV MS NR+F L I++D
Sbjct: 396 YIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQ 455
Query: 470 CLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESF 529
CL + WLWH+RFGH +F GL LSRKE V GLP + P+ VCE C +GK+ + SF
Sbjct: 456 CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSF 515
Query: 530 PTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSF 588
P S RA+K LE++H+D+C ++ + G YF+ FIDDFSRK WVYFLK+KSE + F
Sbjct: 516 PKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIF 575
Query: 589 KTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKN 646
K FKA VEK+SG IK +R+DRG E+ + E +GI+ QLT +PQQNGV ERKN
Sbjct: 576 KKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKN 635
Query: 647 RTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLR 706
RTI++M R MLK+K++PKE WAEAVA AVY+LNR PTKSV KTP+EA SGR+P + HLR
Sbjct: 636 RTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLR 695
Query: 707 VFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGM 766
VFG IA+AHVPD+ R KLDDK E+ IFIGY +NSK YKLYNP+TKK IISR++ FDE G
Sbjct: 696 VFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGE 755
Query: 767 WNWSSKSQKEPIVTPNDYEEEDEHVDTTP--DEPDEPETSN-----REKRNRRLPA--RL 817
W+W+S ++++ P+ E+E E P +EP P TS E + R P +
Sbjct: 756 WDWNS-NEEDYNFFPHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSI 814
Query: 818 QDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTWELTE 877
Q+ T+N E + F LFA+CEP+ F++A + W AMDEEI +I+KN TWELT
Sbjct: 815 QELYEVTENQ---ENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTS 871
Query: 878 LPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRML 937
LP K IGVKWVYK K GE++RYKARLVAKGY Q+ GIDY EVFAPVARL+T+R++
Sbjct: 872 LPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLI 931
Query: 938 ISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAP 997
ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQP GY+V+G+EDKV RLKK LYGLKQAP
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991
Query: 998 RAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRG 1057
RAW +ID YF + F +CP+EH LYIK I D+LI CLYVDDLIFTGNN + EF+
Sbjct: 992 RAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKEDILIACLYVDDLIFTGNNPSIFEEFKK 1050
Query: 1058 AMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKL 1117
M FEMTD+GLMSY+LGIEV Q+ +GIFI+Q+ YA ++LKKFK++ S P+ TP+E +
Sbjct: 1051 EMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGI 1110
Query: 1118 KLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILR 1177
KL+++ +G+ VD T +KSL+GSLRYLT TRPDI+Y VG++SRYME P +H + AKRILR
Sbjct: 1111 KLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILR 1170
Query: 1178 YIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVV 1237
YIKGT+ G+ Y SD KLVGY+DSDW GD + RKSTSG+ F++G A +W SKKQ +V
Sbjct: 1171 YIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIV 1230
Query: 1238 ALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSK 1297
LST EAEY+ ATSC +WLR +L+ + Q PTKI+ DNKSAIAL+KNPVFH RSK
Sbjct: 1231 TLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSK 1290
Query: 1298 HIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMKA 1351
HID R+H IRE +++K+V +EY T +Q+AD FTKPLK E+F K++ +LG+ K+
Sbjct: 1291 HIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGVAKS 1344
>At1g58140 hypothetical protein
Length = 1320
Score = 1337 bits (3459), Expect = 0.0
Identities = 681/1367 (49%), Positives = 919/1367 (66%), Gaps = 81/1367 (5%)
Query: 7 NIVWSGPKLNSELDFNYWEFMMTTHLKAHNIWSYVESGLQQGADELA------------R 54
N+ + P L +++ W M L AH++W VE G + +E + R
Sbjct: 5 NVPFQVPVLTKS-NYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSR 63
Query: 55 RRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERY 114
+RD+ AL I QG+D F K+ A ++KEAW+ L+ S+KG ++ +K +LQ+LR E+E
Sbjct: 64 KRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEAL 123
Query: 115 EMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTD 174
+M E V YF+RV+ + N ++ GE + D +++EK+LR++ +K++H+VT I E+ D +
Sbjct: 124 QMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLE 183
Query: 175 TLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRG 234
+++ +L GS++++ E+ +K KE+ ++ +N+ E + ++ G G
Sbjct: 184 AMTIEQLLGSLQAY-----EEKKKKKEDIVEQVLNMQITKEENGQ-------SYQRRGGG 231
Query: 235 NFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNN-RGRGRGYYNQ--ER 291
RGRGRG + G GRG WR + N N G N+ RGRG+G+ ++
Sbjct: 232 QVRGRGRGGY-GNGRG----WRPHEDNT----------NQRGENSSRGRGKGHPKSRYDK 276
Query: 292 TNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQNQHSLFLASNTLSEEE--NIW 349
++ C+NCGK+GH A++C+ E + + E Q + L +AS E+E + W
Sbjct: 277 SSVKCYNCGKFGHYASECKAPSNKKFEEKA-NYVEEKIQEEDMLLMASYKKDEQEENHKW 335
Query: 350 YLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVF 409
YLD+G SNHMCG+K +F+ LDE+V+ V G+ S + ++GKG I IRLK+G FI +V+
Sbjct: 336 YLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVY 395
Query: 410 YAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFS 469
Y P + N+LS+GQL EK Y++++ ++ D ITKV MS NR+F L I++D
Sbjct: 396 YIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQ 455
Query: 470 CLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESF 529
CL + WLWH+RFGH +F GL LSRKE V GLP + P+ VCE C +GK+ + SF
Sbjct: 456 CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSF 515
Query: 530 PTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSF 588
P S RA+K LE++H+D+C ++ + G YF+ FIDDFSRK WVYFLK+KSE + F
Sbjct: 516 PKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIF 575
Query: 589 KTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKN 646
K FKA VEK+SG IK +R+DRG E+ + E +GI+ QLT +PQQNGVAERKN
Sbjct: 576 KKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKN 635
Query: 647 RTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLR 706
RTI++M R MLK+K++PKE WAEAVA AVY+LNR PTKSV KTP+EA SGR+P + HLR
Sbjct: 636 RTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLR 695
Query: 707 VFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGM 766
VFG IA+AHVPD+ R KLDDK E+ IFIGY +NSK YKLYNP+TKK IISR++ FDE G
Sbjct: 696 VFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGE 755
Query: 767 WNWSSKSQKEPIVTPNDYEEEDEHVDTTP--DEPDEPETSNREKRNRRLPARLQDCVLGT 824
W+W+S ++++ P+ E++ E P +EP P TS
Sbjct: 756 WDWNS-NEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTS-------------------- 794
Query: 825 DNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTWELTELPPDKKP 884
P+ +I CEP+ F+EA + W AMDEEI +I+KN TWELT LP K
Sbjct: 795 ---PTSSQIEE-----KCEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKA 846
Query: 885 IGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQN 944
IGVKWVYK K GE++RYKARLVAKGY Q+ GIDY EVFAPVARL+T+R++ISL+AQN
Sbjct: 847 IGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQN 906
Query: 945 NWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKI 1004
WKIHQMDVKSAFLNG LEEEVY+EQP GY+V+G+EDKV RLKKALYGLKQAPRAW +I
Sbjct: 907 KWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRI 966
Query: 1005 DSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFE 1064
D YF + F +CP+EH LYIK I D+LI CLYVDDLIFTGNN M EF+ M FE
Sbjct: 967 DKYFKEKDFIKCPYEHALYIK-IQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFE 1025
Query: 1065 MTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTRESD 1124
MTD+GLMSY+LGIEV Q+ +GIFI+Q+ YA ++LKKFKM+ S P+ TP+E +KL+++ +
Sbjct: 1026 MTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEE 1085
Query: 1125 GKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLT 1184
G+ VD T +KSL+GSLRYLT TRPDI+Y VG++SRYME P +H + AKRILRYIKGT+
Sbjct: 1086 GEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVN 1145
Query: 1185 EGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEA 1244
G+ Y SD KLVGY+DSDW GD + RKSTSG+ F++G A +W SKKQ +V LST EA
Sbjct: 1146 FGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEA 1205
Query: 1245 EYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFH 1304
EY+ ATSC +WLR +L+ + Q PTKI+ DNKSAIAL+KNPVFH RSKHID R+H
Sbjct: 1206 EYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYH 1265
Query: 1305 KIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMKA 1351
IRE +++K+V +EY T +Q+ADIFTKPLK E F K++ +LG+ K+
Sbjct: 1266 YIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKS 1312
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 1205 bits (3118), Expect = 0.0
Identities = 643/1380 (46%), Positives = 870/1380 (62%), Gaps = 155/1380 (11%)
Query: 7 NIVWSGPKLNSELDFNYWEFMMTTHLKAHNIWSYVESGLQQGADELA------------R 54
N+ + P L +++ W M L AH++W VE G + +E + R
Sbjct: 5 NVPFQVPVLTKS-NYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSR 63
Query: 55 RRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERY 114
+RD+ AL I QG+D F K+ A ++KEAW+ L+ S+KG ++ +K +LQ+LR E+E
Sbjct: 64 KRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEAL 123
Query: 115 EMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTD 174
+M E V YF+RV+ + N ++ GE + D +++EK+LR++ +K++H+VT I E+ D +
Sbjct: 124 QMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLE 183
Query: 175 TLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRG 234
+++ +L GS++++ E+ +K KE+ ++ +N+ E + ++ G G
Sbjct: 184 AMTIEQLLGSLQAY-----EEKKKKKEDIVEQVLNMQITKEENGQ-------SYQRRGGG 231
Query: 235 NFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNN-RGRGRGYYNQ--ER 291
RGRGRG + G GRG WR + N N G N+ RGRG+G+ ++
Sbjct: 232 QVRGRGRGGY-GNGRG----WRPHEDNT----------NQRGENSSRGRGKGHPKSRYDK 276
Query: 292 TNNGCFNCGKYGHKAADCR------YKHQANMAENSYQHFGESSQNQHSLFLASNTLSEE 345
++ C+NCGK+GH A++C+ +K +AN E E Q + L +AS E+
Sbjct: 277 SSVKCYNCGKFGHYASECKAPSNKKFKEKANYVE-------EKIQEEDMLLMASYKKDEQ 329
Query: 346 E--NIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQN 403
E + WYLD+G SNHMCG+K +F+ LDE+V+ V G+ S + ++GKG I IRLK+G
Sbjct: 330 EENHKWYLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQ 389
Query: 404 FIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRI 463
FI +V+Y P + N+LS+GQL EK Y++++ ++ D ITKV MS NR+F L I
Sbjct: 390 FISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNI 449
Query: 464 QHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGK 523
++D CL + WLWH+RFGH +F GL LSRKE V GLP + P+ VCE C +G
Sbjct: 450 RNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGN 509
Query: 524 KHRESFPTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKS 582
+ + SFP S RA+K LE++H+D+C ++ + G YF+ FIDDFSRK WVYFLK+KS
Sbjct: 510 QFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKS 569
Query: 583 EAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNG 640
E + FK FKA VEK+SG IK +R+D G E+ + E +GI+ QLT +PQQNG
Sbjct: 570 EVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNG 629
Query: 641 VAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRP 700
VAERKNRTI++M R MLK+K++PKE WAEAVA AVY+LNR PTKSV KTP+EA SGR+P
Sbjct: 630 VAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 689
Query: 701 SIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVT 760
+ HLRVFG IA+AHVPD+ R KLDDK E+ IFIGY +NSK YKLYNP+TKK IISR++
Sbjct: 690 GVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIV 749
Query: 761 FDEGGMWNWSSKSQKEPIVTPNDYEEEDEHVDTTP--DEPDEPETSN-----REKRNRRL 813
FDE G W+W+S ++++ P+ E++ E P +EP P TS E + R
Sbjct: 750 FDEEGEWDWNS-NEEDYNFFPHFEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERT 808
Query: 814 PA--RLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNK 871
P +Q+ T+N E + F LFA+CEP+ F+EA + W AMDEEI +I+KN
Sbjct: 809 PRFRSIQELYEVTENQ---ENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKND 865
Query: 872 TWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARL 931
TWELT LP K IGVKWVYK K GE++RYKARLVAKGY Q+ GIDY E+FAPVARL
Sbjct: 866 TWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARL 925
Query: 932 DTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALY 991
+T+R++ISL+AQN WKIHQMDVKSAFLNG LEEEVY+EQP GY+V+G+EDKV RLKK LY
Sbjct: 926 ETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLY 985
Query: 992 GLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKM 1051
GLKQAPRAW +ID YF + F +CP+EH LYIK I D+LI CLYVDDLIFTGNN M
Sbjct: 986 GLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKEDILIACLYVDDLIFTGNNPSM 1044
Query: 1052 IAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPIST 1111
EF+ M FEMTD+GLMSY+LGIEV Q+ +GIFI+Q+ YA ++LKKFKM+ S P
Sbjct: 1045 FEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNP--- 1101
Query: 1112 PVEEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQG 1171
SL+GSLRYLT TRPDI+Y VG++SRYME P +H +
Sbjct: 1102 -----------------------SLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKA 1138
Query: 1172 AKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSS 1231
AKRILRYIKGT+ G+ Y +TS Y
Sbjct: 1139 AKRILRYIKGTVNFGLHYS-----------------------TTSDYKL----------- 1164
Query: 1232 KKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPV 1291
+WLR +L+ + Q PTKI+ DNKSAIAL+KNPV
Sbjct: 1165 --------------------VVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPV 1204
Query: 1292 FHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMKA 1351
FH RSKHID R+H IRE +++K+V +EY T +Q+ADIFTKPLK E F K++ +LG+ K+
Sbjct: 1205 FHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGVAKS 1264
>At3g60170 putative protein
Length = 1339
Score = 1149 bits (2972), Expect = 0.0
Identities = 610/1378 (44%), Positives = 848/1378 (61%), Gaps = 112/1378 (8%)
Query: 21 FNYWEFMMTTHLKAHNIWSYVESGL-------------QQGADELARRRDQLALSQILQG 67
+++W M L++ +W VE G+ Q+ A E A+ +D + + Q
Sbjct: 19 YDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSAVEEAKLKDLKVKNFLFQA 78
Query: 68 IDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERYEMSSSETVDQYFT 127
ID I I + TSK W+ +K ++G K ++++LQ+LR+E+E M E +D +
Sbjct: 79 IDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAMKEGEKIDTFLG 138
Query: 128 RVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTDTLSVAELQGSIES 187
R + +VNKM+ GE ++ S +V KILR++ K+++VV +I ES+D TLS+ EL GS+
Sbjct: 139 RTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLSTLSIDELHGSLLV 198
Query: 188 HVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRGSFRGR 247
H R+ ++ E+ALK + + SQ GRGRG FRG
Sbjct: 199 HEQRLNGHVQE--EQALK----VTHEERPSQ-------------------GRGRGVFRG- 232
Query: 248 GRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYNQERTNNGCFNCGKYGHKAA 307
S RGRGRG R C+ C GH
Sbjct: 233 -----------------------------SRGRGRGRGRSGTNRAIVECYKCHNLGHFQY 263
Query: 308 DC-RYKHQANMAENSYQHFGESSQNQHSLFLASNTLSEEENIWYLDTGCSNHMCGKKELF 366
+C ++ AN AE E + ++ N + +E +W+LD+GCSNHM G KE F
Sbjct: 264 ECPEWEKNANYAE-----LEEEEELLLMAYVEQNQANRDE-VWFLDSGCSNHMTGSKEWF 317
Query: 367 SSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSE 426
S L+E TVK GN++ + + GKG + +++ +G I +V+Y P L +NLLS+GQL E
Sbjct: 318 SELEEGFNRTVKLGNDTRMSVVGKGSVKVKV-NGVTQVIPEVYYVPELRNNLLSLGQLQE 376
Query: 427 KDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFSCL----SSIIPNDDWLW 482
+ + I G C + + I + MS NR+F L Q + L ++ ++ LW
Sbjct: 377 RGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLW 436
Query: 483 HMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESFPTGKSWRAKKLLE 542
H RFGH + GL L+ K+ V GLP++K +C C GK+HRES SW++ L+
Sbjct: 437 HCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMSKKTSWKSSTQLQ 496
Query: 543 IVHSDLCSVEIP-TPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGC 601
+VHSD+C P + G RY ++FIDDF+RK WVYFL +KSEA +FK FKA VEK+ G
Sbjct: 497 LVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGA 556
Query: 602 PIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKA 659
+ LRTDRG E+ +F HGI QLT +TPQQNGVAERKNRTIM+ VR ML
Sbjct: 557 FLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSE 616
Query: 660 KQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQ 719
+Q+PK FW+EA +V+I NR PT +V+ TPEEA SGR+P + + RVFGCI Y H+PDQ
Sbjct: 617 RQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQ 676
Query: 720 IRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGMWNWSSKSQKEPIV 779
R KLDDK ++C+F+G SKA++LY+P KK++IS+DV FDE W+W + V
Sbjct: 677 KRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEV 736
Query: 780 TPNDYEEEDE---------------HVDT----------TPDEPDEPETSNREKRNRRLP 814
T +E+DE HV + P P + + R RR P
Sbjct: 737 TLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPP 796
Query: 815 ARLQDCVLGTDNDPSDE-EIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTW 873
+ D G + + ++ + + +P+ F++A +D+ W +AM+ EI +I KN TW
Sbjct: 797 GWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTW 856
Query: 874 ELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDT 933
ELT LP PIGVKWVYKTK GE+D+YKARLVAKGY Q GIDY EVFAPVARLDT
Sbjct: 857 ELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDT 916
Query: 934 IRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGL 993
+R ++++S+Q NW+I Q+DVKSAFL+G L+EEVYV QP G++ G+E+KVY+L+KALYGL
Sbjct: 917 VRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGL 976
Query: 994 KQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIA 1053
KQAPRAWY +I++YF++ F+RCP EHTL+ K G++LIV LYVDDLIFTG++ M
Sbjct: 977 KQAPRAWYSRIEAYFLKEEFERCPSEHTLFTK-TRVGNILIVSLYVDDLIFTGSDKAMCD 1035
Query: 1054 EFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPV 1113
EF+ +M+ FEM+DLG M +FLGIEV Q GIFI Q++YA ++L +F M+ S + P+
Sbjct: 1036 EFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPI 1095
Query: 1114 EEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQGAK 1173
KLT++ +G++VD T +K L+GSL YLT TRPD++YGV L+SR+M +P +SH AK
Sbjct: 1096 VPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAK 1155
Query: 1174 RILRYIKGTLTEGIFY--GNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSS 1231
RILRY+KGT+ GIFY N +KL+ +TDSD+AGD R+STSG+ F + +GAI W+S
Sbjct: 1156 RILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWAS 1215
Query: 1232 KKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPV 1291
KKQ VVALST EAEYI A CA Q VWLR++LE + E+ + T I CDN S I LSK+PV
Sbjct: 1216 KKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPV 1275
Query: 1292 FHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMM 1349
HG+SKHI++RFH +R+L+ V +EYCPT++Q+ADIFTKPLK+E F KL+ +LGM+
Sbjct: 1276 LHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRALLGMV 1333
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 1035 bits (2676), Expect = 0.0
Identities = 574/1342 (42%), Positives = 798/1342 (58%), Gaps = 140/1342 (10%)
Query: 51 ELARR--RDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLR 108
ELA + +D + + ID +I I +TSK+ W+ +K ++G ++ Q ++LQ LR
Sbjct: 17 ELAEKTVKDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLR 76
Query: 109 REYERYEMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTIL 168
R +E EM ET+ YF+RV+ I N MR GED+ DSKVVEKILRT+ K+ +VV I
Sbjct: 77 RSFEVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIE 136
Query: 169 ESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNF 228
ES++ L+V LQ S+ H + V+E LK++
Sbjct: 137 ESNNIKELTVDGLQSSLMVHEQNL--SRHDVEERVLKAETQWRP---------------- 178
Query: 229 NNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYN 288
+GGRG RG RGRGRG + +GRGRGY N
Sbjct: 179 -DGGRG----RGGSPSRGRGRGGY---------------------------QGRGRGYVN 206
Query: 289 QERTNNGCFNCGKYGHKAADC-RYKHQANMAENSYQHFGESSQNQHSLFLASNTLS---E 344
++ CF C K GH A+C ++ +AN E + L L ++ E
Sbjct: 207 RDTVE--CFKCHKMGHYKAECPSWEKEANYVEM-----------EEDLLLMAHVEQIGDE 253
Query: 345 EENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNF 404
E+ IW+LD+GCSNHMCG +E F LD K V+ G++ + +EGKG++ + + DG
Sbjct: 254 EKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEV-DGRIQV 312
Query: 405 IGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNG-RFITKVKMSHNRLFPLRI 463
I DV++ PGL +NL S+GQL +K I C + R + M+ NR+F +
Sbjct: 313 ISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFA 372
Query: 464 ------QHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKI--PSGV 515
+ ++ CL +I + +WH RFGH + GL L+ KE V GLP + V
Sbjct: 373 AVKKSKETEETRCLQ-VIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAV 431
Query: 516 CETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCSVEIP-TPGGCRYFITFIDDFSRKAW 574
C+ C GK+ RES P +W++ ++L++VH+D+C P + G RY + FIDDFSRK W
Sbjct: 432 CDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCW 491
Query: 575 VYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTT 632
Y L +KSE FK FKA VE++SG + LR+DRG EY ++ ++ GI+ QLT
Sbjct: 492 TYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTA 551
Query: 633 RYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPE 692
YTPQQNGVAERKNR++M+M RCML +P++FW EAV AVYILNR P+K++ + TPE
Sbjct: 552 AYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPE 611
Query: 693 EAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKK 752
E S +PS+ HLR+FG +AYA VP Q R KLD+K +C+ G SKAY+LY+P T K
Sbjct: 612 EKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGK 671
Query: 753 VIISRDVTFDEGGMWNWSSKSQKEPIVTPN-------------------DYEEEDEHVDT 793
++ISRDV FDE W W KS +E +V N D EE +E +T
Sbjct: 672 ILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEET 731
Query: 794 TPDEPDE--PETSNREKRNRRLPARLQDCVLGTDND--PSDEEIINFALF-ADCEPVTFE 848
+ + P R R+ P ++D V+G DEE ALF +PV FE
Sbjct: 732 VAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPDDPVCFE 791
Query: 849 EASRDENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARL 908
EA++ E W KAM+ EI +IE+N TWEL ELP + K IG+KW++KTK+ GE+D++KARL
Sbjct: 792 EAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARL 851
Query: 909 VAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYV 968
VAKGY Q+ G+D++EVFAPVA+ DTIR+++ L+A+ W + Q+DVKSAFL+G L+E+V+V
Sbjct: 852 VAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFV 911
Query: 969 EQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFID 1028
EQP G+ V + KVY+LKKALYGLKQAPRAWY +I+ +F + GF++C EHTL++K +
Sbjct: 912 EQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVK-KE 970
Query: 1029 PGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFI 1088
D L+V +YVDDLI+TG++ +MI F+ +M+ F MTDLG M YFLG+EVIQ + GIFI
Sbjct: 971 RSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFI 1030
Query: 1089 SQKKYASDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRP 1148
+Q+KYA++I+KK+ ME + P+ KLT+
Sbjct: 1031 NQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK--------------------------- 1063
Query: 1149 DIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGD 1208
G +SRYME P HL KRILRY++GTL GI Y +LVG+ DSD+AGD
Sbjct: 1064 -----AGAVSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGD 1118
Query: 1209 TETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHH 1268
+ RKSTSGY F LG GAI+W+SKKQ +V LST EAE+++A+ A Q VWLR +LE +
Sbjct: 1119 VDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGC 1178
Query: 1269 EQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIAD 1328
Q T ++CDN S I LSKNPV HGRSKHI +R+H +REL+ E + ++YC T +Q+AD
Sbjct: 1179 RQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVAD 1238
Query: 1329 IFTKPLKIESFYKLKKMLGMMK 1350
I TK +K E F +L+ +G+ +
Sbjct: 1239 IMTKAVKREVFEELRGRMGVRR 1260
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 986 bits (2550), Expect = 0.0
Identities = 541/1377 (39%), Positives = 801/1377 (57%), Gaps = 100/1377 (7%)
Query: 21 FNYWEFMMTTHLKAHNIWSYVESGLQ------QGADELARRR---------DQLALSQIL 65
+++W M T + +WS VE G+ + E AR + D +AL +
Sbjct: 17 YDFWSIKMATIFRTRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTNDTMALQILQ 76
Query: 66 QGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERYEMSSSETVDQY 125
+ IF +IA A +SKEAWD+LK ++G + + KLQSLRREYE +M ++ + +
Sbjct: 77 TAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMYDNDNIKTF 136
Query: 126 FTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILESHDTDTLSVAELQGSI 185
++I + ++ +GE ++++++KIL ++P K+D +V+ + ++ D D L+++EL G +
Sbjct: 137 TDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALTMSELLGIL 196
Query: 186 ESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRGSFR 245
++ R+ + E KE G F R +G
Sbjct: 197 KAQEARVTAREESTKE--------------------------------GAFYVRSKGRES 224
Query: 246 GRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYNQERTNNGCFNCGKYGHK 305
G + N N R N + H+ + + + +R+N C+ CGK GH
Sbjct: 225 GFKQDNTNN-RVNQDKKWCGFHKSSKHTEEECREKPKNDDHGKNKRSNIKCYKCGKIGHY 283
Query: 306 AADCRYKHQANMAENSYQHFGESSQNQ-HSLFLASNTLSE--EENIWYLDTGCSNHMCGK 362
A +CR K++ E ++ E N+ H LF AS S E++W +D+GC+NHM +
Sbjct: 284 ANECRSKNK----ERAHVTLEEEDVNEDHMLFSASEEESTTLREDVWLVDSGCTNHMTKE 339
Query: 363 KELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMG 422
+ FS++++++K ++ N + GKG I + + G + I +VF PGL NLLS+
Sbjct: 340 ERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHG-KRIIKNVFLVPGLEKNLLSVP 398
Query: 423 QLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFSCLSSIIPNDDWLW 482
Q+ Y ++ C + D NG+ I ++M+ ++ F +++ + +++ + ++ W
Sbjct: 399 QIISSGYWVRFQDKRCIIQDANGKEIMNIEMT-DKSFKIKLSSVEEEAMTANVQTEE-TW 456
Query: 483 HMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESFPTGKSWRAKKLLE 542
H R GH L + KE V+GLP K+ C+ C +GK+ R+SFP + ++ LE
Sbjct: 457 HKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLGKQSRKSFPKESQTKTREKLE 516
Query: 543 IVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGC 601
IVH+D+C ++ + G RY++ F+DD++ WVYFLKQKSE +FK FKA VEKQS C
Sbjct: 517 IVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNC 576
Query: 602 PIKALRTDRGQEYLVGTDFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQ 661
IK LR F E GI Q+T Y+PQQNG AERKNR++++M R ML +
Sbjct: 577 SIKTLRPME--------VFCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQD 628
Query: 662 MPKEFWAEAVATAVYILNRCPTKSVQEK-TPEEAGSGRRPSIRHLRVFGCIAYAHVPDQI 720
+P + WAEAV T+ Y+ NR P+K++++ TP E G +P++ HLR+FG I Y H+PDQ
Sbjct: 629 LPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQK 688
Query: 721 RKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGMWNWSSKSQ--KEPI 778
R+KLD K + I IGY + +K Y+++ E +KV +SRDV F E W+W + + K +
Sbjct: 689 RRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFV 748
Query: 779 VTPNDYEEE-------------------------DEHVDTTPDEPDEPETSNREKRNRRL 813
++ ND +E HV + ++ +E ETS K+ + +
Sbjct: 749 MSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSHVLSQVNDQEERETSESPKKYKSM 808
Query: 814 PARLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTW 873
L+ +ND + + I L A+ EP T++EA D+ W +AM+EEI IEKN+TW
Sbjct: 809 KEILEKAP-RMENDEAAQG-IEACLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTW 866
Query: 874 ELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDT 933
+L + P K I VKW+YK K SG ++KARLVA+G+ Q+ GIDY E FAPV+R DT
Sbjct: 867 KLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDT 926
Query: 934 IRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGL 993
IR L++ +AQ W+++QMDVKSAFLNG LEEEVYV QP G+V+ GKE+KV RL KALYGL
Sbjct: 927 IRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGL 986
Query: 994 KQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIA 1053
KQAPRAWY++IDSYFIQNGF R + LY K DVLIV LYVDDLI TGNN+ +I
Sbjct: 987 KQAPRAWYERIDSYFIQNGFARSMNDAALYSK-KKGEDVLIVSLYVDDLIITGNNTHLIN 1045
Query: 1054 EFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPV 1113
F+ M FEMTDLGL++YFLG+EV Q GIF+SQ+KYA+ ++ KF M+ SK +STP+
Sbjct: 1046 TFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPL 1105
Query: 1114 --EEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQG 1171
+ K K D + D T Y+ ++G L YL A+RPD++Y LSRYM P + H Q
Sbjct: 1106 TPQGKRKGVEGDDKEFADPTKYRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQE 1165
Query: 1172 AKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSS 1231
AKR+LRY+KGT G+ + + +LVGY+DSDW G E +KST+GY F LG W S
Sbjct: 1166 AKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQS 1225
Query: 1232 KKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPV 1291
KQ VA STAEAEYI + Q +WL+R+ E + I CDNKSAIA+ +NPV
Sbjct: 1226 CKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPV 1285
Query: 1292 FHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGM 1348
H R+KHI+I++H +RE + + +EYC ++Q+AD+ TK L + F L++ LG+
Sbjct: 1286 QHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 865 bits (2234), Expect = 0.0
Identities = 497/1365 (36%), Positives = 764/1365 (55%), Gaps = 125/1365 (9%)
Query: 28 MTTHLKAHNIWSYVESGLQQGADELARRRDQLALSQILQGIDYSIFGKIANAKTSKEAWD 87
M L+ H +W ++ G +D++ ++ +A + + Q + S ++ KTSK W+
Sbjct: 1 MEATLRVHKVWETIDPG----SDDM--EKNDMARALLFQSVPESTILQVGKHKTSKAMWE 54
Query: 88 ILKLSHKGVEKAQKSKLQSLRREYERYEMSSSETVDQYFTRVINIVNKMRVYGEDIQDSK 147
+K + G E+ +++KLQ+L E++R M +ET+D++ R+ I K GE+I++SK
Sbjct: 55 AIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESLGEEIEESK 114
Query: 148 VVEKILRTMPMK-YDHVVTTILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKS 206
+V+K L+++P K Y H++ + + D +T ++ G ++++ +R+ ++ + +E+
Sbjct: 115 IVKKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVCDEDDSPEEQGKLM 174
Query: 207 QVNLNNVAESSQMGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPS 266
N +ESS GGRG RGRGR
Sbjct: 175 YAN----SESSYD---------TRGGRG----------RGRGR----------------- 194
Query: 267 HQGKGGNNFGSNNRGRGR-GYYNQERTNNGCFNCGKYGHKAADCR------YKHQANMAE 319
S+ RGRG GY ++++ C+ C K GH A++C K Q
Sbjct: 195 ----------SSGRGRGGYGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQN 244
Query: 320 NSYQHFGESSQNQHSLFLASNTLSEEE------NIWYLDTGCSNHMCGKKELFSSLDETV 373
N ES ++L ++ +E N WYLD G SNHM G + FS L+E +
Sbjct: 245 NEDDDEIESLMMHEVVYLNERSVKPKEFEACSDNSWYLDNGASNHMTGNLQWFSKLNEMI 304
Query: 374 KSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQI 433
V+FG++S I I+GKG I + K G + + DV++ P L N++S+GQ +E ++++
Sbjct: 305 TGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDVRM 364
Query: 434 HKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSG 493
TL D G + + S NRL+ + + + CL
Sbjct: 365 KDDQLTLHDREGCLLLRATRSRNRLYKVDLNVENVKCLQLEAAT---------------- 408
Query: 494 LNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCS-VE 552
+ RKE V G+ + C +C +GK+ R+ FP ++RA ++LE+VH DLC +
Sbjct: 409 ---MVRKELVIGISNIPKEKETCGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPIT 465
Query: 553 IPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQ 612
T RY + IDD +R W LK+KSEA + F+ FK VE++SG IK RTD+G
Sbjct: 466 QSTTAKKRYILVLIDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGG 525
Query: 613 EYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEA 670
E++ DF + GI LT YTPQQNGV ER+NRT++ M R +LK +MP W EA
Sbjct: 526 EFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEA 585
Query: 671 VATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGER 730
V + YI+NR T+S+Q +TP E R+P++ HLRVFGCI YA + +KLDD+ +
Sbjct: 586 VRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKM 645
Query: 731 CIFIGYCSNSKAYKLYNPETKKVII-------SRDVT---------FDEGGMWNWSS-KS 773
+++G SKAY+L +P +K+I +RD++ F G+ ++
Sbjct: 646 LVYLGTEPGSKAYRLLDPTNRKIIKWNNSDSETRDISGTFSLTLGEFGNNGIQESDDIET 705
Query: 774 QKEPIVTPNDYEEEDEHVDTTPDEPDEPETS----------NREKRNRRLPARLQDCVLG 823
+K + N +EEE E+ ++ D ET R R P L D VL
Sbjct: 706 EKNGEESENSHEEEGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPNYLDDYVLM 765
Query: 824 TDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTWELTELPPDKK 883
+ + E+++ L + EP F+EA++ + W A EEI +IEKNKTW L +LP +K
Sbjct: 766 AEIE--GEQVL---LAINDEPWDFKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRK 820
Query: 884 PIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQ 943
IG+KWV+K K G I++YKARLVAKGY Q+ GIDY EVFA VAR++TIR++I+L+A
Sbjct: 821 VIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAAS 880
Query: 944 NNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKK 1003
N W++H +DVK+AFL+G L E+VYV QP G+ + E KVY+L KALYGLKQAPRAW K
Sbjct: 881 NGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTK 940
Query: 1004 IDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYF 1063
++ + F +C E ++Y + + +LIV +YVDDL+ TG++ +I F+ M F
Sbjct: 941 LNKILQELNFVKCSKEPSVYRRQ-EEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKF 999
Query: 1064 EMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTRES 1123
EM+DLG ++Y+LGIEV+ +K+GI + Q++YA I+++ M + P+ P+ L+L +
Sbjct: 1000 EMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQ 1059
Query: 1124 DGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTL 1183
+ K + Y+ +IG LRY+ TRPD+ Y VG+LSRY++ P SH K++LRY+KGT+
Sbjct: 1060 EEKCITERDYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTM 1119
Query: 1184 TEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAE 1243
+ G++ LVGY+DS + D + KST+G+ F+L I+W S+KQ VVALS+ E
Sbjct: 1120 SHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCE 1179
Query: 1244 AEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRF 1303
AE++ AT A Q +WL+ + + + I DNKSAIAL+KN VFHGRSKHI R+
Sbjct: 1180 AEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRY 1239
Query: 1304 HKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGM 1348
H IRE + V +++ P EQ ADI TKPL F ++++++G+
Sbjct: 1240 HFIRECVENNLVEVDHVPGVEQRADILTKPLGRIKFREMRELVGV 1284
>At3g25450 hypothetical protein
Length = 1343
Score = 843 bits (2177), Expect = 0.0
Identities = 447/1074 (41%), Positives = 638/1074 (58%), Gaps = 50/1074 (4%)
Query: 319 ENSYQHFGESSQNQHSLFLASNTLSEEE------NIWYLDTGCSNHMCGKKELFSSLDET 372
E H ES ++L + E N WYLD G SNHM G + F LDE
Sbjct: 256 EEDDTHEAESLMMHEVVYLNEKNIRPTELESCINNAWYLDNGASNHMTGNRAWFCKLDEM 315
Query: 373 VKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQ 432
+ V+FG++S I I+GKG I K G + + DV+Y P L N+LS+GQ +E +++
Sbjct: 316 ITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDVYYIPDLKSNILSLGQATESGCDIR 375
Query: 433 IHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFS 492
+ + Y TL D G + K + S NRL+ + ++ + CL N+ +WH R GH F
Sbjct: 376 MREDYLTLHDREGNLLIKAQRSRNRLYKVSLEVENSKCLQLTTTNESTIWHARLGHISFE 435
Query: 493 GLNYLSRKEYVSGLPV-VKIPSGVCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCSV 551
+ + +KE V G+ V C +C GK+ R SFP S+RA ++LE++H DLC
Sbjct: 436 TIKAMIKKELVIGISSSVPQEKETCGSCLFGKQARHSFPKATSYRAAQVLELIHGDLCGP 495
Query: 552 EIP-TPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDR 610
P T RY IDD SR W LK+KSEA FK FKA VE++ G IK RTDR
Sbjct: 496 ISPSTAAKKRYVFVLIDDHSRYMWSILLKEKSEAFGKFKEFKALVEQECGAIIKTFRTDR 555
Query: 611 GQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWA 668
G E+L +F + GI LT YTPQQNGV ER+NRT++ M R +LK MP W
Sbjct: 556 GGEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWG 615
Query: 669 EAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKG 728
EAV + Y++NR T+S+ +TP E ++P++ HLRVFGC++YA V KKLDD+
Sbjct: 616 EAVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRS 675
Query: 729 ERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGMWNW---SSKSQKEPI------- 778
+++G SKAY+L +P +++ +SRDV FDE W W SS++ KE
Sbjct: 676 RMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFDENRSWMWQESSSETDKESGTFTITLS 735
Query: 779 ------VTPNDYEEEDEHVDTTP------------------DEPDEPETSNREKRNRRLP 814
VT ND E E + +EP+ R +R P
Sbjct: 736 EFGNNGVTENDISTEPEETEEAEINGEDENIIEEAETEEHDQSQEEPQPVRRSQRQVIRP 795
Query: 815 ARLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKNKTWE 874
L+D VL ++ E + L + EP F+EA++ + W A EEI +IEKN+TW
Sbjct: 796 NYLKDYVLC-----AEIEAEHLLLAVNDEPWDFKEANKSKEWRDACKEEIQSIEKNRTWS 850
Query: 875 LTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTI 934
L +LP K IGVKWV+K K+ G I++YKARLVAKGY Q+ G+D+ EVFAPVAR++T+
Sbjct: 851 LVDLPVGSKAIGVKWVFKLKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETV 910
Query: 935 RMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLK 994
R++I+L+A N W+IH +DVK+AFL+G L E+VYV QP G+ + ++KVY+L KALYGL+
Sbjct: 911 RLIIALAASNGWEIHHLDVKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLR 970
Query: 995 QAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAE 1054
QAPRAW K++ + F++C E +LY K + ++L+V +YVDDL+ TG+N +I
Sbjct: 971 QAPRAWNTKLNEILKELKFEKCHKEPSLYRKQ-EGENILVVAVYVDDLLVTGSNLDIILN 1029
Query: 1055 FRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSKPISTPVE 1114
F+ M+ FEM+DLG ++Y+LGIEV+Q KDGI + Q++YA IL++ M ++TP+
Sbjct: 1030 FKKGMVGKFEMSDLGKLTYYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMI 1089
Query: 1115 EKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKR 1174
L+L++ D KR+D T Y+ IG LRYL TRPD+ Y VG+LSRY+++P SH K+
Sbjct: 1090 ASLELSKAQDEKRIDETDYRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQ 1149
Query: 1175 ILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQ 1234
ILRY++GT + G+++ + L+GY+DS D + KST G+ F+L I+W S+KQ
Sbjct: 1150 ILRYLQGTTSHGLYFKKGENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQ 1209
Query: 1235 HVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHG 1294
VV LS+ EAE++ AT A Q +WL+ +L + + I DNKSAIAL+KNPVFHG
Sbjct: 1210 QVVTLSSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHG 1269
Query: 1295 RSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGM 1348
RSKHI R+H IRE + ++ +E+ P Q ADI TK L F ++++++G+
Sbjct: 1270 RSKHIHRRYHFIRECVENGQIEVEHVPGVRQKADILTKALGKIKFLEMRELIGV 1323
Score = 113 bits (282), Expect = 8e-25
Identities = 57/191 (29%), Positives = 109/191 (56%), Gaps = 8/191 (4%)
Query: 13 PKLNSELDFNYWEFMMTTHLKAHNIWSYVESGLQQGADELARRRDQLALSQILQGIDYSI 72
P LNS +++ W M L+ H +W +E G ADE ++ +A + + Q I S+
Sbjct: 23 PMLNS-VNYTVWTMRMEAVLRVHKLWGTIEPG---SADE---EKNDMARALLFQSIPESL 75
Query: 73 FGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRREYERYEMSSSETVDQYFTRVINI 132
++ KTS W+ +K + G E+ ++++LQ+L E+++ +M SET+D Y R+ I
Sbjct: 76 ILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKLKMKDSETIDDYVGRISEI 135
Query: 133 VNKMRVYGEDIQDSKVVEKILRTMP-MKYDHVVTTILESHDTDTLSVAELQGSIESHVNR 191
K GEDI++SK+V+K L+++P KY H+V + + D T + ++ G I+++ +R
Sbjct: 136 TTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDLKTTTFEDIAGRIKTYEDR 195
Query: 192 ILEKTEKVKEE 202
+ + + +++
Sbjct: 196 VWDDDDSHEDQ 206
>At1g37110
Length = 1356
Score = 666 bits (1718), Expect = 0.0
Identities = 440/1369 (32%), Positives = 692/1369 (50%), Gaps = 143/1369 (10%)
Query: 43 SGLQQGADELARRRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKS 102
SG ++ D + + + A + I+ I + K+ + T+ + W L+ K +E + +
Sbjct: 65 SGTKEVPDPVKIEQSEQAKNIIINHISDVVLLKVNHYATTADLW--ATLNKKYMETSLPN 122
Query: 103 KLQSLRREYERYEMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDH 162
++ + + Y ++M S+ T+DQ + IV ++ +IQ + V+ IL + H
Sbjct: 123 RIYTQLKLYS-FKMVSTMTIDQNVDEFLRIVAELGSL--EIQVDEEVQAILILNSLPASH 179
Query: 163 VVTTILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEA 222
+ + TL+V ++ S +S + E + K +A V +++ G
Sbjct: 180 IQLKHTLKYGNKTLTVQDVTSSAKSLERELAEAVDLDKGQAA--------VLYTTERGRP 231
Query: 223 RARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGR 282
R+N GG+G +GR R N
Sbjct: 232 LVRNN-QKGGQG----------KGRSRSN------------------------------- 249
Query: 283 GRGYYNQERTNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQNQHSLFLASNTL 342
+T C+ C K GH DC Y + M G ++ +F + ++
Sbjct: 250 -------SKTKVPCWYCKKEGHVKKDC-YSRKKKMESEGQGEAGVITEKL--VFSEALSV 299
Query: 343 SEE--ENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDG 400
+E+ +++W LD+GC++HM +++ F S E +T+ G++ ++ +G+G I I G
Sbjct: 300 NEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGG 359
Query: 401 SQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMS-HNRLF 459
+ + +V Y P L NL+S G L + Y + +G N T ++ S N L+
Sbjct: 360 TIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNK---TALRGSLSNGLY 416
Query: 460 PLRIQHDQFSCLSSIIPNDD-----WLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSG 514
L D + +S + + LWH R GH + L L+ K + + ++
Sbjct: 417 VL----DGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELE-- 470
Query: 515 VCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCSVEIPTPG--GCRYFITFIDDFSRK 572
CE C MGK + SF GK ++ L VH+DL TP G +YF++ IDD +RK
Sbjct: 471 FCEHCVMGKSKKVSFNVGKH-TSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRK 529
Query: 573 AWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQL 630
W+YFLK K E D F +K+ VE Q +K LRTD G E+ + ++HGI+
Sbjct: 530 VWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHR 589
Query: 631 TTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKT 690
T YTPQQNGVAER NRTIM+ VRC+L + + FWAEA ATA Y++NR P ++
Sbjct: 590 TCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNV 649
Query: 691 PEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPET 750
PEE R+P +HLR FG IAY H Q + KL + + F+GY + +K YK++ E
Sbjct: 650 PEEMWLNRKPGYKHLRKFGSIAYVH---QDQGKLKPRALKGFFLGYPAGTKGYKVWLLEE 706
Query: 751 KKVIISRDVTFDEGGMW-----------NWSSKSQKEPIVTPNDYEE------------E 787
+K +ISR+V F E ++ N + K V N + E +
Sbjct: 707 EKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSD 766
Query: 788 DEHVDTTPDEPDEPETSNREKRNRRLPARL--------QDCVLGTDNDPS---DEEIINF 836
E + D E ++ + P R +D V N P+ +E + F
Sbjct: 767 SEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTF 826
Query: 837 ALFA--DC---EPVTFEEA--SRD-ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVK 888
AL +C EP +++EA S+D E W A +E++++ KN TW+L + P D+K IG +
Sbjct: 827 ALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCR 886
Query: 889 WVYKTKYK-PSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWK 947
W++K K P E R+KARLVAKGY Q+ G+DY E+FAPV + +IR+L+SL + +
Sbjct: 887 WLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLE 946
Query: 948 IHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSY 1007
+ QMDVK+ FL+G LEEE+Y+EQP G+V E+KV RLKK+LYGLKQ+PR W K+ D +
Sbjct: 947 LEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRF 1006
Query: 1008 FIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTD 1067
F R + +Y+K + D + + LYVDD++ G + I + + + FEM D
Sbjct: 1007 MSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMKD 1066
Query: 1068 LGLMSYFLGIEVIQQKDG--IFISQKKYASDILKKFKMEHSKPISTPVEEKLKLT---RE 1122
+G S LGI++ + + G + +SQ+ Y +L +F M +K + PV KL E
Sbjct: 1067 MGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVREE 1126
Query: 1123 SDGKRVDSTHYKSLIGSLRY-LTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKG 1181
+ D Y S +GS+ Y + TRPD+ Y + L+SRYM P H + K ++RY+KG
Sbjct: 1127 DECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKG 1186
Query: 1182 TLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALST 1241
+ + D + GY DS++A D + R+S SGY F +G +SW + Q VVA+ST
Sbjct: 1187 AQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMST 1246
Query: 1242 AEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDI 1301
EAEYI A + +W++ +L+ M +Q+ KI+CD++SAI LSKN V+H R+KHID+
Sbjct: 1247 TEAEYIALAEAAKEAMWIKGLLQDMGMQQD-KVKIWCDSQSAICLSKNSVYHERTKHIDV 1305
Query: 1302 RFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMK 1350
RF+ IR+++ +V + T D TK + + F K LG++K
Sbjct: 1306 RFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKF---KSALGVLK 1351
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 665 bits (1717), Expect = 0.0
Identities = 441/1343 (32%), Positives = 690/1343 (50%), Gaps = 140/1343 (10%)
Query: 51 ELARRRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRRE 110
EL + + A S I+ + + KI +++ +L + + KA +++ ++
Sbjct: 65 ELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLY--MSKALPNRIYQKQKL 122
Query: 111 YERYEMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTTILES 170
Y ++MS + +++ + I+ + + D +L ++P +D + T+
Sbjct: 123 YS-FKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYG 181
Query: 171 HDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARDNFNN 230
TLS+ E+ +I S KE L
Sbjct: 182 LGRVTLSLDEVVAAIYS------------KELEL-------------------------- 203
Query: 231 GGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGYYNQE 290
G + S +G+ G F + + +G+ +NN + R ++
Sbjct: 204 -------GSNKKSIKGQAEGLFVKEKTET--------RGRTEQRGNNNNNKKSR---SKS 245
Query: 291 RTNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQNQHSLFLASNTLSEEENIWY 350
R+ GC+ CG+ + N ++ E++ S L+S + E+ W
Sbjct: 246 RSKKGCWICGE----------------SSNGSSNYSEANGLYVSEALSSTDIHLEDE-WV 288
Query: 351 LDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFY 410
+DTGCS HM K+E F L+E +V+ GN + + G G I ++ + G + +V Y
Sbjct: 289 MDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNVRY 348
Query: 411 APGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQFSC 470
P + NLLS+G + Y+ ++ G ++I G+ +T V+ + L+ L+ +
Sbjct: 349 IPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLT-VRRCYT-LYLLQWRPVTEES 406
Query: 471 LSSIIPNDDW-LWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMGKKHRESF 529
LS + DD LWH R GH ++ L +K + V K+ + CE C GK R F
Sbjct: 407 LSVVKRQDDTILWHRRLGHMSQKNMDLLLKKGLLDKKKVSKLET--CEDCIYGKAKRIGF 464
Query: 530 PTGKSWRAKKLLEIVHSDLCSV-EIP-TPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDS 587
+ +KL E VHSDL +P + G C+YFI+FIDD++RK +YFLK K EA D
Sbjct: 465 NLAQHDTREKL-EYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFDK 523
Query: 588 FKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFEQHGIQHQLTTRYTPQQNGVAERK 645
F + VE Q+ IK LRTD G E+ + +F Q GI T YTPQQNGVAER
Sbjct: 524 FVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAERM 583
Query: 646 NRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHL 705
NRT+M+ VR ML +PK+FWAEA T ++N+ P+ ++ + P++ SG+ P +L
Sbjct: 584 NRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSPIYSYL 643
Query: 706 RVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGG 765
R FGCIA+ H D KL+ + ++ I +GY K YK++ E KK ++SR+V F E
Sbjct: 644 RRFGCIAFVHTDD---GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQENA 700
Query: 766 ----MWNWSSKSQKEPIVTPNDYEEED-EHVDTTPDEPDEPETSNREKRNRRLPARLQDC 820
M + E P+ Y + D +H + D+P + N PA Q
Sbjct: 701 SYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPS-PATTQTY 759
Query: 821 VLGTDNDP--------------------------SDEEIINFALF-----ADCEPVTFEE 849
G +++ DE+ + AL+ + EP + E
Sbjct: 760 SEGVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPADYSE 819
Query: 850 ASRDENWIK---AMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYK-PSGEIDRYK 905
A R NW K AM+EE+ + KN TW + + P +K IG +W+YK K P E R+K
Sbjct: 820 AKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFK 879
Query: 906 ARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEE 965
ARLVAKGY Q+ GIDY E+FAPV + +IR+L+S+ AQ + ++ Q+DVK+AFL+G L+E+
Sbjct: 880 ARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGELKEK 939
Query: 966 VYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIK 1025
+Y+ P GY KED+V L K+LYGLKQAP+ W +K ++Y + GF R ++ YIK
Sbjct: 940 IYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCAYIK 999
Query: 1026 FIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVI--QQK 1083
+ G + + LYVDD++ N + I++ + + F+M DLG LG+E+I +++
Sbjct: 1000 ELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREE 1059
Query: 1084 DGIFISQKKYASDILKKFKMEHSKPISTPVEEKLKL------TRESDGKRVDSTHYKSLI 1137
+ +++SQ Y + IL+ + M SK + TP+ LK+ +E D + S Y S +
Sbjct: 1060 NTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQDEDYMKSIPYSSAV 1119
Query: 1138 GSLRY-LTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVK 1196
GS+ Y + TRPD+ Y VG++SRYM P H G K +LRYIKG+L + Y +SD K
Sbjct: 1120 GSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSSDFK 1179
Query: 1197 LVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQT 1256
+VGY D+D A + R+S +G F LG ISW S +Q VVALST EAEY++ T +
Sbjct: 1180 VVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYMSLTEAVKEA 1239
Query: 1257 VWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVV 1316
VW++ +L+ +EQ + +I+CD++SAIALSKN V H R+KHID+R+ IR++IA +
Sbjct: 1240 VWMKGLLKEFGYEQKS-VEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRDIIANGDGD 1298
Query: 1317 IEYCPTKEQIADIFTKPLKIESF 1339
+ T++ ADIFTK + + F
Sbjct: 1299 VVKIDTEKNPADIFTKIVPVNKF 1321
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 650 bits (1677), Expect = 0.0
Identities = 445/1381 (32%), Positives = 694/1381 (50%), Gaps = 180/1381 (13%)
Query: 42 ESGLQQGADELARRRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQK 101
E+ + D++ + + A S I+ + ++ K+ KT+ A I L + K+
Sbjct: 61 ETATSKLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTA--AGMIKVLDQLFMAKSLP 118
Query: 102 SKLQSLRREYERYEMSSSETVDQY---FTRVINIVNKMRVYGEDIQDSKVVEKILRTMPM 158
+++ +R Y Y+MS + T+++ F ++I+ + ++V D +D +V +L ++P
Sbjct: 119 NRIYLKQRLYG-YKMSENMTMEENVNDFFKLISDLENVKVVVPD-EDQAIV--LLMSLPR 174
Query: 159 KYDHVVTTILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQ 218
++D + T+ + TL + E+ +I S + + + +K
Sbjct: 175 QFDQLKETL--KYCKTTLHLEEITSAIRSKILELGASGKLLK------------------ 214
Query: 219 MGEARARDNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSN 278
NN + RGR RG KG N S
Sbjct: 215 ----------NNSDGLFVQDRGRSETRG-----------------------KGPNKNKSR 241
Query: 279 NRGRGRGYYNQERTNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQ------NQ 332
++ +G G C+ CGK GH C Y + + S GE+S +
Sbjct: 242 SKSKGAG--------KTCWICGKEGHFKKQC-YVWKERNKQGSTSERGEASTVTARVTDA 292
Query: 333 HSLFLASNTLSEEE---NIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEG 389
+L ++ L E + W LDTGCS HM +K+ ET V+ GN++ ++G
Sbjct: 293 AALVVSRALLGFAEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKG 352
Query: 390 KGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFIT 449
G + I+ +DGS + DV Y P + NL+S+G L +K + KG T+ + +T
Sbjct: 353 IGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFKNDLTVLT 412
Query: 450 KVKMSHNRLFPLRIQHDQFSCLSSIIP---NDDWLWHMRFGHFHFSGLNYLSRKEYVSGL 506
K S +Q + +++I ++ LWH R GH GL L K ++
Sbjct: 413 GKKESTLYF----LQGTTLAGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLD-- 466
Query: 507 PVVKIPSGVCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLC-SVEIP-TPGGCRYFIT 564
K SF K KL + VHSDL S +P + G C+YFIT
Sbjct: 467 ----------------KNIMISFGAAKHVTKDKL-DYVHSDLWGSTNVPFSIGKCQYFIT 509
Query: 565 FIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGT--DFFE 622
FIDDF+R+ W+YF++ K EA F +K +E Q +K L TD G E+ F
Sbjct: 510 FIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCR 569
Query: 623 QHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCP 682
+ G+ T YTPQQNGVAER NRTIM+ VRCML + K+FWAEA +TAV+++N+ P
Sbjct: 570 KEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSP 629
Query: 683 TKSVQEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKA 742
+ S++ PEE +G P + L+ FG +AY H DQ KL+ + ++ IF+GY K
Sbjct: 630 SSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIH-SDQ--GKLNPRAKKGIFLGYPDGVKR 686
Query: 743 YKLYNPETKKVIISRDVTFDEGGMWNWSSKSQKEPIVTPNDYEEEDEHV----------- 791
+K++ E +K ++SRD+ F E M+ K ND EED+ +
Sbjct: 687 FKVWLLEDRKCVVSRDIVFQENQMYKELQK---------NDMSEEDKQLTEVERTLIELK 737
Query: 792 DTTPDEPDEPE---TSNREKRNRRLPARLQDCVLGTDNDPS------------------- 829
+ + D+ ++ E SN+E+ + A V TD+D
Sbjct: 738 NLSADDENQSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAP 797
Query: 830 ------DEEIINFALFAD-----CEPVTFEEASRD---ENWIKAMDEEINAIEKNKTWEL 875
D+ ++ FAL EP T+EEA R E W +A EE+++++KN TW++
Sbjct: 798 QRFVEEDDSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDV 857
Query: 876 TELPPDKKPIGVKWVYKTKYK-PSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTI 934
+ P K+ IG KW++K K P E RYKARLVAKG+ Q+ GIDY E+F+PV + +I
Sbjct: 858 IDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSI 917
Query: 935 RMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLK 994
R L+S+ Q + ++ Q+DVK+AFL+G L+E + + QP GY +KV LKK+LYGLK
Sbjct: 918 RYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLK 977
Query: 995 QAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAE 1054
Q+PR W ++ DS+ I +G+QR + +Y + ++ G + + LYVDD++ N I +
Sbjct: 978 QSPRQWNQRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQK 1037
Query: 1055 FRGAMISYFEMTDLGLMSYFLGIEVIQQKD-GIF-ISQKKYASDILKKFKMEHSKPISTP 1112
+ ++ FEM DLG LG+E+ + ++ GI +SQ +Y + +L+ F M+ SK TP
Sbjct: 1038 LKESLNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTP 1097
Query: 1113 VEEKLKL------TRESDGKRVDSTHYKSLIGSLRY-LTATRPDIVYGVGLLSRYMEDPC 1165
+ KL T D + + Y + IGS+ Y + +RPD+ Y VG++SR+M P
Sbjct: 1098 LGAHFKLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPS 1157
Query: 1166 VSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTG 1225
H Q K ++RY+KGT + + + ++ GY DSD+A D + R+S +G+ F G
Sbjct: 1158 KEHWQAVKWVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGN 1217
Query: 1226 AISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIA 1285
ISW S Q VVALST EAEY+ + +WLR + M EQ+ ++ CD++SAIA
Sbjct: 1218 TISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDA-VEVMCDSQSAIA 1276
Query: 1286 LSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKM 1345
LSKN V H R+KHID+R+H IRE IA+ E+ + T ADIFTK + + + K+
Sbjct: 1277 LSKNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKL 1336
Query: 1346 L 1346
L
Sbjct: 1337 L 1337
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 624 bits (1610), Expect = e-179
Identities = 371/1046 (35%), Positives = 568/1046 (53%), Gaps = 48/1046 (4%)
Query: 335 LFLASNTLSEEENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIA 394
L +A +TLS W +D+G ++H+ + LFSSLD +V S V + I G G
Sbjct: 419 LTVARHTLSSAT--WVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGT-- 474
Query: 395 IRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIH-KGYCTLIDG-NGRFITKVK 452
LK + +V + P NL+S+ L++ + I K C + D GR + + +
Sbjct: 475 --LKLNDDILLKNVLFIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGR 532
Query: 453 MSHNRLFPLRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIP 512
N L+ L + DQ +++++ D +WH R GH L+ +S + +
Sbjct: 533 RVAN-LYLLDVG-DQSISVNAVV--DISMWHRRLGHASLQRLDAIS--DSLGTTRHKNKG 586
Query: 513 SGVCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSR 571
S C C + K+ + SFPT K++ +++H D+ + T G +YF+T +DD SR
Sbjct: 587 SDFCHVCHLAKQRKLSFPTSNKV-CKEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSR 645
Query: 572 KAWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGTDFFEQHGIQHQLT 631
W+Y LK KSE + F F VE Q +KA+R+D E L T F+ + GI +
Sbjct: 646 ATWMYLLKTKSEVLTVFPAFIQQVENQYKVKVKAVRSDNAPE-LKFTSFYAEKGIVSFHS 704
Query: 632 TRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTP 691
TP+QN V ERK++ I+++ R ++ Q+P W + V TAV+++NR P++ + KTP
Sbjct: 705 CPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTP 764
Query: 692 EEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETK 751
E +G P LR FGC+ Y+ + R K + C+F+GY S K YKL + E+
Sbjct: 765 YEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESN 824
Query: 752 KVIISRDVTFDEGGM---WNWSSKSQKEPIVTPNDYEEEDEHVDTT------PDEPDEPE 802
V ISR+V F E N S+S + + TP DTT P + +
Sbjct: 825 TVFISRNVQFHEEVFPLAKNPGSESSLK-LFTPMVPVSSGIISDTTHSPSSLPSQISDLP 883
Query: 803 TSNREKRNRRLPARLQDCVLGT---DNDPSDEEIINFALFADCE------------PVTF 847
+R R+ PA L D T D+ I+++ + P +
Sbjct: 884 PQISSQRVRKPPAHLNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNY 943
Query: 848 EEASRDENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKAR 907
EA + W +A+D EI A+EK TWE+T LP KK +G KWV+ K+ G ++RYKAR
Sbjct: 944 AEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKAR 1003
Query: 908 LVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVY 967
LVAKGY QK G+DY + F+PVA++ TI++L+ +SA W + Q+DV +AFLNG LEEE++
Sbjct: 1004 LVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIF 1063
Query: 968 VEQPAGYVVRG----KEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLY 1023
++ P GY R + V RLK+++YGLKQA R W+KK S + GF++ +HTL+
Sbjct: 1064 MKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLF 1123
Query: 1024 IKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQK 1083
+K D G+ +IV +YVDD++ + A+ + F++ DLG + YFLG+EV +
Sbjct: 1124 LKMYD-GEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTT 1182
Query: 1084 DGIFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLRYL 1143
GI I Q+KYA ++L+ M KP+S P+ LK+ ++ D Y+ ++G L YL
Sbjct: 1183 AGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYL 1242
Query: 1144 TATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDS 1203
T TRPDI + V L ++ P +HL A R+L+YIKGT+ +G+FY +SD+ L G+ DS
Sbjct: 1243 TITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADS 1302
Query: 1204 DWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRIL 1263
DWA ++R+ST+ + +G ISW SKKQH V+ S+AEAEY + VWL +L
Sbjct: 1303 DWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLL 1362
Query: 1264 EVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTK 1323
+ P +Y D+ +AI ++ NPVFH R+KHI + H +RE + E+ + + T+
Sbjct: 1363 VSLQASPPVPI-LYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTE 1421
Query: 1324 EQIADIFTKPLKIESFYKLKKMLGMM 1349
+Q+ADI TKPL F LK + ++
Sbjct: 1422 DQVADILTKPLFPYQFEHLKSKMSIL 1447
>At4g21360 putative transposable element
Length = 1308
Score = 618 bits (1593), Expect = e-177
Identities = 419/1360 (30%), Positives = 685/1360 (49%), Gaps = 184/1360 (13%)
Query: 50 DELARRRDQLALSQILQGIDYSIFGKIANAKTSKEAWDILKLSHKGVEKAQKSKLQSLRR 109
D + + A + I+ I ++ K+ + T+ E W L+ +E + +++ + R
Sbjct: 74 DPIKFEQSDQAKNFIINHITDTVLLKVQHCVTAAELW--ATLNKLFMETSLPNRIYTQLR 131
Query: 110 EYERYEMSSSETVDQY---FTRVINIVNKMRVY-GEDIQDSKVVEKILRTMPMKYDHVVT 165
Y ++M + ++DQ F R++ + +++ GE++Q IL ++P Y +
Sbjct: 132 LYS-FKMVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQ----AILILNSLPPSYIQLKH 186
Query: 166 TILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARAR 225
T+ + TLSV ++ S +S + E+ E ++ A + +++ G + +
Sbjct: 187 TL--KYGNKTLSVQDVVSSAKSLERELSEQKETIRAPA-------STALYTAERGRPQTK 237
Query: 226 DNFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRG 285
N +G+G+G RGR SN++ R
Sbjct: 238 ---------NTQGQGKG----RGR---------------------------SNSKSRLT- 256
Query: 286 YYNQERTNNGCFNCGKYGHKAADCRYKHQANMAENSYQHFGESSQNQHSLFLASNTLSEE 345
C+ C K GH DC Y + + G ++ S E
Sbjct: 257 ----------CWFCKKEGHVKKDC-YAGKRKLENEGQGKAGVITEKLVYSEALSMYDQEA 305
Query: 346 ENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFI 405
++ W +D+GC+ HM + + FS +E + + G++ + +G G + + GS +
Sbjct: 306 KDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVNTHGGSIRVL 365
Query: 406 GDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSH-----NRLFP 460
+V + P L NL+S G L + Y H+G DG RF + K + N L+
Sbjct: 366 KNVRFVPNLRRNLISTGTLDKLGYK---HEGG----DGKVRFYKENKTALCGNLVNGLYV 418
Query: 461 L---RIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCE 517
L + ++ + S + LWH R GH + + L+ K + + ++ CE
Sbjct: 419 LDGHTVVNENCNVEGSNEKTE--LWHCRLGHMSLNNMKILAEKGLLEKKDIKEL--SFCE 474
Query: 518 TCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCSVEIPTPGGCRYFITFIDDFSRKAWVYF 577
C MGK + SF GK ++L +H+DL G +YF++ IDD SRK W+ F
Sbjct: 475 NCVMGKSKKLSFNVGKHI-TDEVLGYIHADLW--------GKQYFLSIIDDKSRKVWLMF 525
Query: 578 LKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEY--LVGTDFFEQHGIQHQLTTRYT 635
LK K E + F +K VE Q +K LRTD G E+ L +F +Q+GI+ T YT
Sbjct: 526 LKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYT 585
Query: 636 PQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAG 695
PQQNGVA+R NRT+M+ VRC+L + + FWAEA ATA Y++NR P +V PEE
Sbjct: 586 PQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELW 645
Query: 696 SGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVII 755
++P +HLR FGCIAY H+ + KL + + +F+GY +K YK++ + +K +I
Sbjct: 646 LDKKPGYKHLRRFGCIAYVHLD---QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCVI 702
Query: 756 SRDVTFDEGGMWNWSSKSQKEPIVTPNDYE------------------------EEDEHV 791
SR++ F+E ++ +S ++ + +D E E D+
Sbjct: 703 SRNIVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVTIEEIDQES 762
Query: 792 DTTPDEPDEP-----------ETSNREKRNRRLPARLQDCVLGTDNDPSDEEIINFALFA 840
D+ EP +RE+R P +L D EEI +
Sbjct: 763 DSENSVTQEPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESE---- 818
Query: 841 DCEPVTFEEASRDENWIK---AMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYK- 896
EP + +A +D++WIK M EEI+++ KN TW++ E P ++K I +W++K K
Sbjct: 819 --EPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGI 876
Query: 897 PSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSA 956
P E RYKARLVA+G+ Q+ GIDY EVFAPV + +IR+L+S +++ ++ QMDVK+
Sbjct: 877 PGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTT 936
Query: 957 FLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRC 1016
FL+G L++ +Y+EQP G+ V ++D+V LKK+LYGLKQAPR W KK ++ + F R
Sbjct: 937 FLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARS 996
Query: 1017 PFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLG 1076
+ +Y+K ++PG+ + + LYVDD++ + I++ + A+ FEM D+G S LG
Sbjct: 997 EHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAASRILG 1056
Query: 1077 IEVIQ-QKDG-IFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTR---ESDGKRVDST 1131
I++I+ +K+G + +SQ +Y ++++F+M +K +STP+ KLT E +
Sbjct: 1057 IDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSVDPEVV 1116
Query: 1132 HYKSLIGSLRY-LTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYG 1190
Y S +GS+ Y + T PD+ Y +GL+SR+M P G
Sbjct: 1117 PYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP-------------------------G 1151
Query: 1191 NNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITAT 1250
N +V+ GY DSD A D + R+S SGY F +G +SW S QHVVALS+ +AE+I T
Sbjct: 1152 ANLEVQ--GYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSLQHVVALSSTQAEFIALT 1209
Query: 1251 SCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELI 1310
+ +W+R +LE M Q P ++CD++SAI LSKN FH R+KH++++F+ IR++I
Sbjct: 1210 EAVKEAIWIRGLLEDM-GLQPKPATVWCDSQSAICLSKNNAFHDRTKHVEVKFYFIRDII 1268
Query: 1311 AEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLGMMK 1350
EV + T AD+ TK + ++ F + +L + +
Sbjct: 1269 EAGEVKVRKIHTSVNPADMLTKCIPVKKFEEALDVLKLQR 1308
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 612 bits (1577), Expect = e-175
Identities = 346/1025 (33%), Positives = 553/1025 (53%), Gaps = 40/1025 (3%)
Query: 335 LFLASNTLSEEENIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIA 394
L ++ N+LS + W +D+G ++H+ ++LF +LD ++ S V N+ I G G +
Sbjct: 430 LAVSHNSLSSDT--WVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVL 487
Query: 395 IRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMS 454
I QN V + P NL+S+ L+ I C I + +T +
Sbjct: 488 INKDIILQN----VLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGE-- 541
Query: 455 HNRLFPLRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSG 514
R+ L + Q +S D +WH R GH FS L+ LS E + S
Sbjct: 542 GKRIGNLYVLDTQSPAISVNAVVDVSVWHKRLGHPSFSRLDSLS--EVLGTTRHKNKKSA 599
Query: 515 VCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKA 573
C C + K+ + SFP+ + E++H D+ + T G +YF+T +DD SR
Sbjct: 600 YCHVCHLAKQKKLSFPSANNI-CNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRAT 658
Query: 574 WVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGTDFFEQHGIQHQLTTR 633
W+Y LK KS+ + F F VE Q +K++R+D +E L T+F++ GI +
Sbjct: 659 WIYLLKSKSDVLTVFPAFIDLVENQYDTRVKSVRSDNAKE-LAFTEFYKAKGIVSFHSCP 717
Query: 634 YTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEE 693
TP+QN V ERK++ I+++ R ++ M +W + V TAV+++NR P+ + KTP E
Sbjct: 718 ETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFE 777
Query: 694 AGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKV 753
+G+ P L+ FGC+ Y+ + R K + C+F+GY K YKL + E+ V
Sbjct: 778 VLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVV 837
Query: 754 IISRDVTFDEGGMWNWSSKSQK----EPIVTPNDYEEEDEHVDTTPDEPD-EPETSNREK 808
ISR+V F E ++ +S Q + TP D + + P P T ++
Sbjct: 838 HISRNVEFHEE-LFPLASSQQSATTASDVFTPMDPLSSGNSITSHLPSPQISPSTQISKR 896
Query: 809 RNRRLPARLQDCVLGTDNDPSDEEIINFALFADCEPV---------------TFEEASRD 853
R + PA LQD N I + ++ P ++ EA
Sbjct: 897 RITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDS 956
Query: 854 ENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGY 913
+ W A+D+EI A+E+ TWE+T LPP KK +G KWV+ K+ G ++R+KAR+VAKGY
Sbjct: 957 KEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGY 1016
Query: 914 KQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAG 973
QK G+DY E F+PVA++ T+++L+ +SA W ++Q+D+ +AFLNG LEE +Y++ P G
Sbjct: 1017 TQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDG 1076
Query: 974 YV-VRGKE---DKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDP 1029
Y ++G + V RLKK++YGLKQA R W+ K + + GF++ +HTL+++ I
Sbjct: 1077 YADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIG- 1135
Query: 1030 GDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFIS 1089
+ +++ +YVDD++ + A+ + F++ +LG + YFLG+EV + +GI +S
Sbjct: 1136 SEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLS 1195
Query: 1090 QKKYASDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPD 1149
Q+KYA ++L M KP S P+ ++L++ D Y+ L+G L YLT TRPD
Sbjct: 1196 QRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPD 1255
Query: 1150 IVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDT 1209
I + V L ++ P +HL ++L+YIKGT+ +G+FY D+ L GYTD+DW
Sbjct: 1256 ITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCP 1315
Query: 1210 ETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHE 1269
++R+ST+G+ +G+ ISW SKKQ V+ S+AEAEY + + WL +L +
Sbjct: 1316 DSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVH 1375
Query: 1270 QNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADI 1329
P +Y D+ +A+ ++ NPVFH R+KHI+I H +RE + ++ + + TK+Q+ADI
Sbjct: 1376 SGVPI-LYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADI 1434
Query: 1330 FTKPL 1334
TKPL
Sbjct: 1435 LTKPL 1439
>At4g10460 putative retrotransposon
Length = 1230
Score = 610 bits (1574), Expect = e-174
Identities = 418/1319 (31%), Positives = 652/1319 (48%), Gaps = 191/1319 (14%)
Query: 50 DELARRRDQLALSQILQGIDYSIFGKIANAKTSK---EAWDILKLSHKGVEKAQKSKLQS 106
+ L + Q A S I+ + + K KT+ EA D L +S KA +++
Sbjct: 62 EALMEEKRQKARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMS-----KALPNRIY- 115
Query: 107 LRREYERYEMSSSETVDQYFTRVINIVNKMRVYGEDIQDSKVVEKILRTMPMKYDHVVTT 166
L+++ Y+M + +V+ + ++ + + D +L ++P ++D + T
Sbjct: 116 LKQKLYSYKMQENLSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDT 175
Query: 167 ILESHDTDTLSVAELQGSIESHVNRILEKTEKVKEEALKSQVNLNNVAESSQMGEARARD 226
+ TLSV E+ +I S KE L
Sbjct: 176 LKYGSGRTTLSVDEVVAAIYS------------KELEL---------------------- 201
Query: 227 NFNNGGRGNFRGRGRGSFRGRGRGNFNQWRDNNYNNFNPSHQGKGGNNFGSNNRGRGRGY 286
G + S RG+ G + + + +G G + R R +G+
Sbjct: 202 -----------GSNKKSIRGQAEGLYVKDKPETRGMSEQKEKGNKGRS-----RSRSKGW 245
Query: 287 YNQERTNNGCFNCGKYGHKAADC--RYKHQANMAENSYQHFGESSQ-----NQHSLFLAS 339
GC+ CG+ GH C + K Q + + GE++ ++ S + S
Sbjct: 246 -------KGCWICGEEGHFKTSCPNKGKQQNKGKDQASGSKGEAATIKGNTSEGSGYYVS 298
Query: 340 NTLSEEE----NIWYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAI 395
L + N W +DTGC+ HM KKE F L E TV+ GN S K
Sbjct: 299 EALHSTDVNLGNEWVMDTGCNYHMTHKKEWFEELSEDAGGTVRMGNKSTSKFRVK----- 353
Query: 396 RLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSH 455
Y P + NLLSMG L E Y+ + G + +G + + H
Sbjct: 354 --------------YIPDMDRNLLSMGTLEEHGYSFESKNGVLVVKEGTRTLL--IGSRH 397
Query: 456 NRLFPLRIQHDQFSCLSSIIPNDDW-LWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSG 514
+L+ L+ + + ++ NDD LWH R GH ++ L +K Y+ G V K+
Sbjct: 398 EKLYLLQGKPEVSHSMTVERRNDDTVLWHRRLGHISQKNMDILVKKGYLDGKKVSKLE-- 455
Query: 515 VCETCQMGKKHRESFPTGKSWRAKKLLEIVHSDLCSV-EIPTP-GGCRYFITFIDDFSRK 572
+CE C GK R SF + + L VHSDL +P G C+YFI+FID +SRK
Sbjct: 456 LCEDCIYGKARRLSFVVA-THNTEDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDVYSRK 514
Query: 573 AWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVG--TDFFEQHGIQHQL 630
WVYFLK K EA +F + VE Q+G IK LR D G E+ DF ++ GI
Sbjct: 515 TWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRHQ 574
Query: 631 TTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKT 690
T YTPQQNGVAER N TIM+ VR ML +PK FWAEA T V ++N+ P+ +V +
Sbjct: 575 TCAYTPQQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFEI 634
Query: 691 PEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPET 750
++ SG+ P +L+ FGC+A+ + + KL + ++ +F+GY S K YK++ E
Sbjct: 635 SDKRWSGKSPVYNYLKRFGCVAFTYADEG---KLVPRAKKGVFLGYLSGEKGYKVWLLEE 691
Query: 751 KKVIISRDVTFDEGGMWNWSSKSQKEPIVTPNDYEEEDEHVDTTPDEPDEPETSNREKRN 810
+K +SR+VTF E ++ + K+ +E +TS+R +R
Sbjct: 692 RKCSVSRNVTFQENAVYRDVMQKNKDS---------------------EEVDTSSRVRRE 730
Query: 811 RRLPARLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMDEEINAIEKN 870
R P R V G ++ +D+E +F + EA D ++ KN
Sbjct: 731 IRAPKRFD--VEGYYSEFTDDEEESFNV----------EALMD------------SLLKN 766
Query: 871 KTWELTELPPDKKPIGVKWVYKTKYKPSG-EIDRYKARLVAKGYKQKPGIDYFEVFAPVA 929
TW + + P ++ IG KW++K K G E R+KARLV+KGY Q+ GIDY ++F+PV
Sbjct: 767 HTWTVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREGIDYTDIFSPVV 826
Query: 930 RLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVYRLKKA 989
+ +IR+L+++ A+ N+++ Q+DVK+AFL+G LEE++++E P GY + K+ +V L K
Sbjct: 827 KHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFKQGEVCLLNKT 886
Query: 990 LYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGNNS 1049
+YGLKQ+PR W +K DSY ++ GF+R P YIK ++ G + + +YVDD++ +
Sbjct: 887 MYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLIYVDDMLVAARDM 946
Query: 1050 KMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQ--KDGIFISQKKYASDILKKFKMEHSK 1107
++I+E + + FEM DLG LG+E+ + K + +SQ+ Y S +L+ + ++ K
Sbjct: 947 QVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKVLETYNVDQCK 1006
Query: 1108 PISTPVEEKLKLTRE------SDGKRVDSTHYKSLIGSLRY-LTATRPDIVYGVGLLSRY 1160
+ TP+ LK+ SD + + S Y + +GS+ Y + TRPD+ Y VG++SR+
Sbjct: 1007 FVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYSNAVGSIMYSMIDTRPDLAYCVGIISRF 1066
Query: 1161 MEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAF 1220
M P +D+ L GY DSD+A + E R+S SG F
Sbjct: 1067 MSKP--------------------------KGADLTLRGYCDSDYAANLENRRSISGMVF 1100
Query: 1221 HLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDN 1280
LG I+ S Q VV +S+ +A Y++ T + +WL+ +L+ +EQ T +I+CD+
Sbjct: 1101 TLGGSTINLRSCLQKVVVMSSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQKT-VEIFCDS 1159
Query: 1281 KSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESF 1339
+SAIALSKN V H R+KHIDI++HKIRE+IA+ V ++ T ADIFTK + + F
Sbjct: 1160 QSAIALSKNNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNSADIFTKVVPVSKF 1218
>At1g70010 hypothetical protein
Length = 1315
Score = 585 bits (1508), Expect = e-167
Identities = 378/1142 (33%), Positives = 578/1142 (50%), Gaps = 88/1142 (7%)
Query: 273 NNFGSNNRGRGRGYYNQERTNNGCFNCGKYGHKAADCRYKHQANMAENSYQHF------- 325
+N S + G Y +ER C C + GH C KH + S Q F
Sbjct: 191 SNQSSQSALNGDTYQKKERPV--CSYCSRPGHVEDTCYKKHGYPTSFKSKQKFVKPSISA 248
Query: 326 -----GESSQNQHSLFLASNTLSE-EENIWYLDTGCSNHMCG-KKELFS---SLDETVKS 375
E N S+ T S+ ++ + +L + + E+ S S D + S
Sbjct: 249 NAAIGSEEVVNNTSVSTGDLTTSQIQQLVSFLSSKLQPPSTPVQPEVHSISVSSDPSSSS 308
Query: 376 TVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDVFYAPGLHHNLLSMGQLSEK-DYNMQIH 434
TV PI G + G + DV + P NLLS+ L++ +
Sbjct: 309 TV-------CPISGSVHL------GRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFD 355
Query: 435 KGYCTLIDGNGRFITKVKMSHNRLFPLRIQH------DQFSCLSSIIPNDDWLWHMRFGH 488
+ C L D + + L+ + + D ++S+ +D LWH R GH
Sbjct: 356 ETSCVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHD--LWHKRLGH 413
Query: 489 FHFSGLNYLSRKEYVSGLPVVKIPSGV-CETCQMGKKHRESFPTGKSWRAKKLLEIVHSD 547
L +S + P K + C C + K+ F + + ++ + +++H D
Sbjct: 414 PSVQKLQPMSS---LLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNN-KSSRPFDLIHID 469
Query: 548 LCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQKSEAVDSFKTFKAFVEKQSGCPIKAL 606
+ T G RYF+T +DD+SR WVY L+ KS+ + TF VE Q IK +
Sbjct: 470 TWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGV 529
Query: 607 RTDRGQEYLVGTDFFEQHGIQHQLTTRYTPQQNGVAERKNRTIMDMVRCMLKAKQMPKEF 666
R+D E L T F+ GI + TPQQN V ERK++ I+++ R + +P +
Sbjct: 530 RSDNAPE-LNFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISY 588
Query: 667 WAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPSIRHLRVFGCIAYAHVPDQIRKKLDD 726
W + + TAVY++NR P +++K P E + P+ H++VFGC+ YA + R K
Sbjct: 589 WGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSP 648
Query: 727 KGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTFDEGGM-WNWSSKSQKEPIV------ 779
+ + C FIGY S K YKL + ET +I+SR V F E + S SQ+E
Sbjct: 649 RAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNP 708
Query: 780 TPNDYEEEDEHVDTTPDE------PDEPETSN-------REKRNRRLPARLQDCVLGTDN 826
TP + +HV+ + P T+N R + PA LQD +
Sbjct: 709 TPPMQRQSSDHVNPSDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVV 768
Query: 827 DPSDEEIINFA----------LFADC-----EPVTFEEASRDENWIKAMDEEINAIEKNK 871
+ EI F F C EP + EA + + W AM E + +E
Sbjct: 769 SSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTH 828
Query: 872 TWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEVFAPVARL 931
TWE+ LP DK+ IG +W++K KY G ++RYKARLVA+GY QK GIDY E F+PVA+L
Sbjct: 829 TWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKL 888
Query: 932 DTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKE----DKVYRLK 987
+++++L+ ++A+ + Q+D+ +AFLNG L+EE+Y+ P GY R + + V RLK
Sbjct: 889 NSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLK 948
Query: 988 KALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIFTGN 1047
K+LYGLKQA R WY K S + GF + +HT ++K D G L V +Y+DD+I N
Sbjct: 949 KSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISD-GIFLCVLVYIDDIIIASN 1007
Query: 1048 NSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDILKKFKMEHSK 1107
N + + M S+F++ DLG + YFLG+E+++ GI ISQ+KYA D+L + K
Sbjct: 1008 NDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCK 1067
Query: 1108 PISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLLSRYMEDPCVS 1167
P S P++ + +S G V+ Y+ LIG L YL TRPDI + V L+++ P +
Sbjct: 1068 PSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKA 1127
Query: 1168 HLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSGYAFHLGTGAI 1227
HLQ +IL+YIKGT+ +G+FY S+++L Y ++D+ ++R+STSGY LG I
Sbjct: 1128 HLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLI 1187
Query: 1228 SWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIYCDNKSAIALS 1287
W S+KQ VV+ S+AEAEY + + + VWL L+ + + PT ++CDN++AI ++
Sbjct: 1188 CWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIA 1247
Query: 1288 KNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIESFYKLKKMLG 1347
N VFH R+KHI+ H +RE + + + + T+ QIAD FTKPL F++L +G
Sbjct: 1248 NNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMG 1307
Query: 1348 MM 1349
++
Sbjct: 1308 LL 1309
>At4g17450 retrotransposon like protein
Length = 1433
Score = 574 bits (1479), Expect = e-163
Identities = 351/1031 (34%), Positives = 533/1031 (51%), Gaps = 69/1031 (6%)
Query: 349 WYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDV 408
W +D+G ++H+ ++L+ + + V+ N+ + I G G I+L D + +V
Sbjct: 432 WVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIG--FIQLSDAIS--LHNV 487
Query: 409 FYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSHNRLFPLRIQHDQF 468
Y P NL+S E G ++D N T + P +F
Sbjct: 488 LYIPEFKFNLISE-LTKELMIGRGSQVGNLYVLDFNENNHTVSLKGTTSMCP------EF 540
Query: 469 SCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSG------VCETCQMG 522
S SS++ D WH R GH +S ++ LS V L V KI VC C +
Sbjct: 541 SVCSSVVV-DSVTWHKRLGHPAYSKIDLLSD---VLNLKVKKINKEHSPVCHVCHVCHLS 596
Query: 523 KKHRESFPTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQK 581
K+ SF + ++ ++VH D +PT + W+Y LK K
Sbjct: 597 KQKHLSFQSRQNM-CSAAFDLVHIDTWGPFSVPT--------------NDATWIYLLKNK 641
Query: 582 SEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGTDFFEQHGIQHQLTTRYTPQQNGV 641
S+ + F F V Q +K++R+D E L TD F HGI + TP+QN V
Sbjct: 642 SDVLHVFPAFINMVHTQYQTKLKSVRSDNAHE-LKFTDLFAAHGIVAYHSCPETPEQNSV 700
Query: 642 AERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRRPS 701
ERK++ I+++ R +L +P EFW + V TAV+++NR PT + K+P E P+
Sbjct: 701 VERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPA 760
Query: 702 IRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDVTF 761
L+ FGC+ Y+ + R K + + C+F+GY K YKL + ET V ISR V F
Sbjct: 761 YESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIF 820
Query: 762 DEGGMWNWSSKSQKE-----------PIVTPNDYEEEDEHVDTTPDE---------PDEP 801
E ++ + S + K+ P T + E+ +DT P + P +P
Sbjct: 821 HED-IFPFISSTIKDDIKDFFPLLQFPARTDDLPLEQTSIIDTHPHQDVSSSKALVPFDP 879
Query: 802 ETSNREKRNRRLPARLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEASRDENWIKAMD 861
+ KR ++ P LQD + IN A P + EA + W AM
Sbjct: 880 LS----KRQKKPPKHLQDFHCYNNTTEPFHAFINNITNAVI-PQRYSEAKDFKAWCDAMK 934
Query: 862 EEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDY 921
EEI A+ + TW + LPP+KK IG KWV+ K+ G I+RYKARLVAKGY Q+ G+DY
Sbjct: 935 EEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDY 994
Query: 922 FEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKE- 980
E F+PVA+L ++RM++ L+A+ W +HQ+D+ +AFLNG L+EE+Y++ P GY E
Sbjct: 995 EETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEA 1054
Query: 981 ---DKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCL 1037
+ RL K++YGLKQA R WY K+ + GFQ+ +HTL+IK+ + G ++ V +
Sbjct: 1055 LPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYAN-GVLMGVLV 1113
Query: 1038 YVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDGIFISQKKYASDI 1097
YVDD++ N+ +A+F + SYF++ DLG YFLGIE+ + + GI I Q+KY ++
Sbjct: 1114 YVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISICQRKYILEL 1173
Query: 1098 LKKFKMEHSKPISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLRYLTATRPDIVYGVGLL 1157
L SKP S P++ +KL +E DST Y+ L+G L YL TRPDI Y V L
Sbjct: 1174 LSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTL 1233
Query: 1158 SRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKSTSG 1217
++ P HL ++LRY+KGT+ +G+FY + L GYTDSD+ T++R+ +
Sbjct: 1234 CQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAA 1293
Query: 1218 YAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMHHEQNTPTKIY 1277
Y +G +SW SKKQ V++STAEAE+ + + +WL R+ + P +Y
Sbjct: 1294 YCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLY 1353
Query: 1278 CDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKPLKIE 1337
CDN +A+ + N VFH R+K +++ +K RE + + + T EQ+AD TK +
Sbjct: 1354 CDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVETGEQVADPLTKAIHPA 1413
Query: 1338 SFYKLKKMLGM 1348
F+KL +G+
Sbjct: 1414 QFHKLIGKMGV 1424
>At4g03810 putative retrotransposon protein
Length = 964
Score = 571 bits (1472), Expect = e-163
Identities = 353/961 (36%), Positives = 525/961 (53%), Gaps = 59/961 (6%)
Query: 409 FYAPGLHHNLLSMGQLSEKDYNMQIHKGYCTLIDGNGRFITKVKMSH-----NRLFPL-R 462
+Y P ++ N++S+ L + ++ I K C D + F + + N+ P+
Sbjct: 9 YYVPAINKNIISVSCLDMEGFHFSI-KNKCCSFDRDDMFYGSAPLDNGLHVLNQSMPIYN 67
Query: 463 IQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKIPSGVCETCQMG 522
I+ +F S N +LWH R GH + + L ++ + CE+C +G
Sbjct: 68 IRTKKFK---SNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYET--CESCLLG 122
Query: 523 KKHRESFPTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYFLKQK 581
K + F TG S RA LL ++H+D+C + G +YFITF DDFSR +VY +K K
Sbjct: 123 KMTKAPF-TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHK 181
Query: 582 SEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYL--VGTDFFEQHGIQHQLTTRYTPQQN 639
S++ ++FK F+ V+ Q G IKALR+DRG EYL V +D + GI QLT TPQ N
Sbjct: 182 SKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWN 241
Query: 640 GVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSGRR 699
GV+ER+NRT++DMVR M+ +P FW A+ T+ ++LNRCP+KSV EKTP E +G+
Sbjct: 242 GVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSV-EKTPYEIWTGKV 300
Query: 700 PSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISRDV 759
P++ L+++GC +YA I KL K ++C F+GY +K Y Y+P KV + R+
Sbjct: 301 PNLSFLKIWGCESYAK--RLITDKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNG 358
Query: 760 TFDEGGMWNWSSKSQKEPIVTPNDYEEEDEHVDTTPDEPD------------EPETSNRE 807
F E + SK V + E V T+ +E EPE R
Sbjct: 359 AFLER---EFLSKGTSGSKVLLEEVREPQGDVPTSQEEHQLDLRRVVEPILVEPEV-RRS 414
Query: 808 KRNRRLPARLQDCVLGTDNDPSDEEIINFALFADCEPVTFEEASR---DENWIKAMDEEI 864
+R+R P R +D V+ D+ + F + +D EP ++EEA + W++A E+
Sbjct: 415 ERSRHEPDRFRDWVM-------DDHAL-FMIESD-EPTSYEEALMGPDSDKWLEAAKSEM 465
Query: 865 NAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEIDRYKARLVAKGYKQKPGIDYFEV 924
++ +NK W L +LP KPI KW++K K G I YKA LVAKGYKQ GIDY E
Sbjct: 466 ESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDET 525
Query: 925 FAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGTLEEEVYVEQPAGYVVRGKEDKVY 984
++PVA L +IR+L++ +A +++I QMDVK+AFLNG LEE VY+ QP G+ V KV
Sbjct: 526 YSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVC 585
Query: 985 RLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHTLYIKFIDPGDVLIVCLYVDDLIF 1044
+L +++YGLKQA R+W + + + F R E +Y K V + LYVDD++
Sbjct: 586 KLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVY-KKTSGSAVAFLVLYVDDILL 644
Query: 1045 TGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQQKDG--IFISQKKYASDILKKFK 1102
GN+ ++ + + S F M D+G +Y LGI + + + I +SQ Y +L +F
Sbjct: 645 LGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFN 704
Query: 1103 MEHSKPISTPVEEKLKLTR------ESDGKRVDSTHYKSLIGSLRY-LTATRPDIVYGVG 1155
M SK P+ + L++ + +R+ Y S IGS+ Y + TRPD+ +
Sbjct: 705 MHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALS 764
Query: 1156 LLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYTDSDWAGDTETRKST 1215
+ SRY DP SH + I +Y++ T + + YG + ++ + GYTD+ + D + +S
Sbjct: 765 MTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQ 824
Query: 1216 SGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRRILEVMH--HEQNTP 1273
SG+ F L GA+SW S KQ VA ST EAEYI A+ A + VW+R+ + + + P
Sbjct: 825 SGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGP 884
Query: 1274 TKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCPTKEQIADIFTKP 1333
+YCDN AIA +K P H +SKHI R+H IRE+I +V I T +AD FTKP
Sbjct: 885 IDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKP 944
Query: 1334 L 1334
L
Sbjct: 945 L 945
>At1g26990 polyprotein, putative
Length = 1436
Score = 559 bits (1441), Expect = e-159
Identities = 340/1048 (32%), Positives = 537/1048 (50%), Gaps = 86/1048 (8%)
Query: 349 WYLDTGCSNHMCGKKELFSSLDETVKSTVKFGNNSNIPIEGKGQIAIRLKDGSQNFIGDV 408
W +D+G S+H+ ++ L+ + ++ V+ N + IEG G I+L D + +V
Sbjct: 421 WVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTG--FIQLTDALS--LHNV 476
Query: 409 FYAPGLHHNLLSMGQLSEK-DYNMQIHKGYCT-------LIDGNGRFITKVKMSHNRLFP 460
+ P NLLS+ L++ + C L+ G G + + + +
Sbjct: 477 LFIPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSL 536
Query: 461 LRIQHDQFSCLSSIIPNDDWLWHMRFGHFHFSGLNYLSRKEYVSGLPVVKI--PSGVCET 518
+ + + S + N+ +WH R GH F+ ++ LS V LP KI S C
Sbjct: 537 VDVSSFPGKSVCSSVKNESEMWHKRLGHPSFAKIDTLSD---VLMLPKQKINKDSSHCHV 593
Query: 519 CQMGKKHRESFPTGKSWRAKKLLEIVHSDLCS-VEIPTPGGCRYFITFIDDFSRKAWVYF 577
C + K+ F + R +K E+VH D +PT RYF+T +DDFSR W+Y
Sbjct: 594 CHLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYL 652
Query: 578 LKQKSEAVDSFKTFKAFVEKQSGCPIKALRTDRGQEYLVGTDFFEQHGIQHQLTTRYTPQ 637
LKQKS+ + F +F VE Q + ++R+D E L + F + GI+ TP+
Sbjct: 653 LKQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHE-LKFNELFAKEGIKADHPCPETPE 711
Query: 638 QNGVAERKNRTIMDMVRCMLKAKQMPKEFWAEAVATAVYILNRCPTKSVQEKTPEEAGSG 697
QN V ERK++ ++++ R ++ +P E+W + V TAV+++NR + + +TP E +
Sbjct: 712 QNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTK 771
Query: 698 RRPSIRHLRVFGCIAYAHVPDQIRKKLDDKGERCIFIGYCSNSKAYKLYNPETKKVIISR 757
+P L+ FGC+ Y + R K D + + CIF+GY K YKL + ET V ISR
Sbjct: 772 GKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISR 831
Query: 758 DVTFDEGGMWNWSSKSQKEPIVT--PNDY---EEEDEHVDTTPDEPDEPETSN------- 805
V F E ++ ++S + + P+ Y DEH+ D P +
Sbjct: 832 HVIFYED-IFPFASSNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESSSMIF 890
Query: 806 -----REKRNRRLPARLQD--CVLGTDNDP--SDEEIINFALFADCE------------- 843
+ R R+LP+ LQD C T S + N+ ++
Sbjct: 891 VPSEPKSTRQRKLPSHLQDFHCYNNTPTTTKTSPYPLTNYISYSYLSEPFGAFINIITAT 950
Query: 844 --PVTFEEASRDENWIKAMDEEINAIEKNKTWELTELPPDKKPIGVKWVYKTKYKPSGEI 901
P + EA D+ W AM +EI+A + TW + +LP K +G KW+ K+ G I
Sbjct: 951 KLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGKVAVGCKWIITIKFLADGSI 1010
Query: 902 DRYKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNNWKIHQMDVKSAFLNGT 961
+R+KARLVAKGY Q+ GID+F F+PVA++ T+++L+SL+ + W +HQ+D+ +A LNG
Sbjct: 1011 ERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAPKMKWYLHQLDISNALLNGD 1070
Query: 962 LEEEVYVEQPAGYVVRGKEDKVYRLKKALYGLKQAPRAWYKKIDSYFIQNGFQRCPFEHT 1021
LEEE+Y++ P GY + G + +P A +C +HT
Sbjct: 1071 LEEEIYMKLPPGY-------------SEIQGQEVSPNA---------------KCHGDHT 1102
Query: 1022 LYIKFIDPGDVLIVCLYVDDLIFTGNNSKMIAEFRGAMISYFEMTDLGLMSYFLGIEVIQ 1081
L++K D G L+V +YVDD++ AE + S+F++ DLG +FLGIE+ +
Sbjct: 1103 LFVKAQD-GFFLVVLVYVDDILIASTTEAASAELTSQLSSFFQLRDLGEPKFFLGIEIAR 1161
Query: 1082 QKDGIFISQKKYASDILKKFKMEHSKPISTPVEEKLKLTRESDGKRVDSTHYKSLIGSLR 1141
DGI + Q+KY D+L KP S P+E KL++++ D Y+ ++G L+
Sbjct: 1162 NADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSKDTGTLLEDGKQYRRILGKLQ 1221
Query: 1142 YLTATRPDIVYGVGLLSRYMEDPCVSHLQGAKRILRYIKGTLTEGIFYGNNSDVKLVGYT 1201
YL TRPDI + V L++Y P HLQ +ILRY+KGT+ +G+FYG +++ L G++
Sbjct: 1222 YLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGTIGQGLFYGADTNFDLRGFS 1281
Query: 1202 DSDWAGDTETRKSTSGYAFHLGTGAISWSSKKQHVVALSTAEAEYITATSCATQTVWLRR 1261
DSDW +TR+ +G+A +G +SW SKKQ VV++S+AEAEY + + +WL
Sbjct: 1282 DSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSAEAEYRAMSVATKELIWLGY 1341
Query: 1262 ILEVMHHEQNTPTKIYCDNKSAIALSKNPVFHGRSKHIDIRFHKIRELIAEKEVVIEYCP 1321
IL P +YCDN++A+ ++ N VFH R+KHI+ HK+RE I + +
Sbjct: 1342 ILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIENDCHKVRECIEAGILKTIFVR 1401
Query: 1322 TKEQIADIFTKPLKIESFYKLKKMLGMM 1349
T Q+AD TKPL + F + LG++
Sbjct: 1402 TDNQLADTLTKPLYPKPFRENNSKLGLL 1429
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,285,400
Number of Sequences: 26719
Number of extensions: 1513678
Number of successful extensions: 6495
Number of sequences better than 10.0: 283
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 4774
Number of HSP's gapped (non-prelim): 841
length of query: 1351
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1240
effective length of database: 8,352,787
effective search space: 10357455880
effective search space used: 10357455880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC148918.3