Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148532.9 + phase: 0 
         (267 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g25610 dehydration-induced protein RD22                            275  2e-74
At1g49320 unknown protein                                             156  1e-38
At1g60390                                                             128  4e-30
At1g70370 unknown protein                                             126  1e-29
At1g23760 putative polygalacuronase isoenzyme 1 beta subunit          115  3e-26
At2g17150 unknown protein                                              32  0.46
At3g11590 unknown protein                                              30  1.0
At1g57580                                                              30  1.3
At5g65930 kinesin-like calmodulin-binding protein                      30  1.7
At5g66200 unknown protein                                              29  3.0
At2g29710 putative flavonol 3-O-glucosyltransferase                    29  3.0
At5g16720 putative protein                                             28  3.9
At4g01270 putative RING zinc finger protein                            28  3.9
At1g24150 unknown protein                                              28  5.1
At1g23160 GH3-like auxin-regulated protein                             28  5.1
At5g58080 ARR2 - like protein                                          28  6.6
At4g30160 putative villin                                              28  6.6
At2g22420 putative peroxidase                                          28  6.6
At1g76780 putative heat shock protein                                  28  6.6
At1g03830 unknown protein                                              28  6.6

>At5g25610 dehydration-induced protein RD22
          Length = 392

 Score =  275 bits (702), Expect = 2e-74
 Identities = 147/271 (54%), Positives = 185/271 (68%), Gaps = 12/271 (4%)

Query: 2   VDVSKGGVDVGVRKVYEGGGTYVNDEKFPFVPFFYLYALNESQIQLHDKQNVTLFFLKKD 61
           V V KGGV V  R  ++G   YV   K    PF Y YA  E+Q  LHD  N  LFFL+KD
Sbjct: 127 VGVGKGGVTVHTR--HKGRPIYVG-VKPGANPFVYNYAAKETQ--LHDDPNAALFFLEKD 181

Query: 62  LHHGTKLNLQFTNNSG----AKFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKR 117
           L  G ++N++F    G      FLP+  A ++PF S K    L +FS++ GS+EAE++K+
Sbjct: 182 LVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKK 241

Query: 118 TISECEANGIKGEEKLCITSLESMVDFTISKLGN-NVEAVSTEVDKNSNGLQQYVIAK-G 175
           TI ECEA  + GEEK C TSLESMVDF++SKLG  +V AVSTEV K +  +Q+Y IA  G
Sbjct: 242 TIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAG 301

Query: 176 VKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEWN 235
           VKKL + +K++VCHK+ YP+AVFYCHK   T VY+VPLEG +G   K +AVCH +TS WN
Sbjct: 302 VKKLSD-DKSVVCHKQKYPFAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWN 360

Query: 236 PKHLAFYVLKVQPGTVPICHILPQDHVVWVS 266
           P HLAF VLKV+PGTVP+CH LP+ HVVW S
Sbjct: 361 PNHLAFKVLKVKPGTVPVCHFLPETHVVWFS 391


>At1g49320 unknown protein
          Length = 280

 Score =  156 bits (394), Expect = 1e-38
 Identities = 88/231 (38%), Positives = 133/231 (57%), Gaps = 13/231 (5%)

Query: 49  DKQNVTLFFLKKDLHHGTKLNLQFTNNSGAKFLP---KEVANSIPFSSNKMENILNKFSI 105
           D  ++ ++F   DL  GTKL + F  N   K  P   ++ A+ IPF+ +K++ +L+ FSI
Sbjct: 51  DDPSLYMYFTLNDLKLGTKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSI 110

Query: 106 KEGSKEAEIVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVE--AVSTEV--- 160
            + S + + +K T+  C+A  I+GE K C TSLES++D     +G NV+   ++T+V   
Sbjct: 111 TKDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNVDLKVMTTKVMVP 170

Query: 161 --DKNSNGLQQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCH-KTDSTEVYSVPLEGVD 217
             +  S  L  Y   +  K+L    K + CH+  YPYAV+YCH     + V+ V L   D
Sbjct: 171 AQNSISYALHNYTFVEAPKEL-VGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDD 229

Query: 218 GNM-VKTIAVCHTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVWVSK 267
           G   V   AVCH DTS W+  H+AF VLK++P + P+CH  P D++VWV+K
Sbjct: 230 GRQRVVGPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWVTK 280


>At1g60390
          Length = 624

 Score =  128 bits (321), Expect = 4e-30
 Identities = 73/217 (33%), Positives = 109/217 (49%), Gaps = 13/217 (5%)

Query: 56  FFLKKDLHHGTKLNLQFTNNSGAK--FLPKEVANSIPFSSNKMENILNKFSIKEGSKEAE 113
           FF +  L  GT + +    +   K  FLP+ +  ++PFSS+ +  I   F   E S  A 
Sbjct: 409 FFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAG 468

Query: 114 IVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVIA 173
           I+   +SECE     GE K C+ S E M+DF  S LG  V   +TE   N  G ++ V+ 
Sbjct: 469 IISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTE---NVVGSKKKVVI 525

Query: 174 KGVKKL--GEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTI----AVC 227
             V  +  G+  + + CH+  YPY ++YCH      VY   L  +D   ++ I    A+C
Sbjct: 526 GKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDL--LDPKSLEKINHGVAIC 583

Query: 228 HTDTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVW 264
           H DTS W+P H AF  L   PG + +CH + ++ + W
Sbjct: 584 HIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTW 620


>At1g70370 unknown protein
          Length = 626

 Score =  126 bits (317), Expect = 1e-29
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 9/215 (4%)

Query: 56  FFLKKDLHHGTKLNLQFTNNSGAK--FLPKEVANSIPFSSNKMENILNKFSIKEGSKEAE 113
           FF +  L  GT + +    +   K  FLP+ +   +PFS++K+  I   F   E S    
Sbjct: 411 FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGG 470

Query: 114 IVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVIA 173
           I+   ++ECE     GE K C+ S E M+DF  S LG +V   +TE   N  G ++ V+ 
Sbjct: 471 IITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTE---NVAGSKEKVVI 527

Query: 174 KGVKKL--GEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDG--NMVKTIAVCHT 229
             V  +  G+  K + CH+  YPY ++YCH      VY   L  ++    +   IA+CH 
Sbjct: 528 GKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHM 587

Query: 230 DTSEWNPKHLAFYVLKVQPGTVPICHILPQDHVVW 264
           DTS W P H AF  L  +PG + +CH + ++ + W
Sbjct: 588 DTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNW 622


>At1g23760 putative polygalacuronase isoenzyme 1 beta subunit
          Length = 622

 Score =  115 bits (287), Expect = 3e-26
 Identities = 66/213 (30%), Positives = 100/213 (45%), Gaps = 5/213 (2%)

Query: 56  FFLKKDLHHGTKLNLQFTNNSGAK--FLPKEVANSIPFSSNKMENILNKFSIKEGSKEAE 113
           FF +  L  GT + +    +   K  FLP+ + + +PFS++K+  I   F   + S    
Sbjct: 407 FFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEG 466

Query: 114 IVKRTISECEANGIKGEEKLCITSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVIA 173
           I+   + ECE      E K C+ S E M+DF  S LG +V   +TE    S         
Sbjct: 467 IITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKV 526

Query: 174 KGVKKLGEKNKTIVCHKENYPYAVFYCHKTDSTEVYSVPL--EGVDGNMVKTIAVCHTDT 231
            G+   G   K++ CH+  YPY ++YCH      VY   L        +   IA+CH DT
Sbjct: 527 NGING-GRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDT 585

Query: 232 SEWNPKHLAFYVLKVQPGTVPICHILPQDHVVW 264
           S W   H AF +L  +PG + +CH + ++ + W
Sbjct: 586 SAWGANHGAFMLLGSRPGQIEVCHWIFENDMNW 618


>At2g17150 unknown protein
          Length = 909

 Score = 31.6 bits (70), Expect = 0.46
 Identities = 21/77 (27%), Positives = 33/77 (42%)

Query: 68  LNLQFTNNSGAKFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKRTISECEANGI 127
           LN Q  N   A+  P+  ++S   SS    N  N  +I        ++KR  SE + + +
Sbjct: 710 LNAQTDNGIMAEENPRSPSSSCSKSSGSSNNNENTGNILVAEDADAVLKRAHSEAQLHNV 769

Query: 128 KGEEKLCITSLESMVDF 144
             EE  C+   +S   F
Sbjct: 770 NQEETKCLARTQSHKTF 786


>At3g11590 unknown protein
          Length = 622

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 105 IKEGSKEAEIVKRTISECEANGIKGEEKLCITSL--ESMVDFTISKLGNNVEAVSTEVDK 162
           I E   E E +KR   + +    K  E L +     E  V   +S+  + +E  +  VDK
Sbjct: 374 ISEDKAEVEELKRESFKVKEEVEKEREMLQLADALREERVQMKLSEAKHQLEEKNAAVDK 433

Query: 163 NSNGLQQYVIAKGVKKLGEKNKTIVCHKE 191
             N LQ Y+ AK  K+   +      H E
Sbjct: 434 LRNQLQTYLKAKRCKEKTREPPQTQLHNE 462


>At1g57580
          Length = 346

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 51/222 (22%), Positives = 87/222 (38%), Gaps = 28/222 (12%)

Query: 55  LFFLKKDLHHGTKLN--LQFTNNSGAKFLPKEVA------NSIPFSSNKMENILNKF--- 103
           L FL K+L     L    +F N+S +KF P +          I F+ ++ +     F   
Sbjct: 95  LLFLNKNLCVANPLTKKFRFLNHSRSKFFPTDFTLRGGRQQVIGFAVDQTDRTTPSFKIV 154

Query: 104 SIKEGS-----KEAEIVKRTISECEAN--GIKGEEKLCITSLESMVDFTISKLGNNVEAV 156
           +IKEG+      +  IV   +   +A    I+  ++LC+ +L + VD  ++ +    E +
Sbjct: 155 NIKEGAVHWLRNDGSIVAFNLKTEKARLIPIRFPKELCLKTLFTAVDNNLTLISATEEVI 214

Query: 157 STEVDKNSNGLQQYVIAKGVKK--LGEKNKTIVCHKENYPYAVFYCHKTDSTEVY----- 209
                 N     ++V+ K ++   L EK +    + E Y        +T   + Y     
Sbjct: 215 YVYAFHNILSDPKWVLVKQIRNGVLDEK-RLYSWYVEAYDGKSLVLRETILKKDYYNKHL 273

Query: 210 SVPLEGVDGNMVKTIAVCHTDTSEWNPKHLAFYVLKVQPGTV 251
              L G D    K   +      EW+P  L FY     P +V
Sbjct: 274 KQVLHGYDLRANKWEVI--GSIPEWSPSGLDFYQFTPSPSSV 313


>At5g65930 kinesin-like calmodulin-binding protein
          Length = 1260

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 27/83 (32%), Positives = 40/83 (47%), Gaps = 2/83 (2%)

Query: 51   QNVTLFFLKKDLHHGTKLNLQFTNNSGAKFLPKEVANSIPFSSNKMENILNKFSIKEGSK 110
            +N  L  L  D   G    L F N S A+    E  NS+ ++S ++  I+N  S    SK
Sbjct: 1162 RNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLLYAS-RVRTIVNDPSKHISSK 1220

Query: 111  EAEIVKRTISEC-EANGIKGEEK 132
            E   +K+ ++   E  G KGEE+
Sbjct: 1221 EMVRLKKLVAYWKEQAGKKGEEE 1243


>At5g66200 unknown protein
          Length = 651

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 45  IQLHDKQNVTLFFLKKDLHHGTKLNLQFTNNSGAKFLPK---EVANSIPFSSNK-MENIL 100
           +Q H K  +        +HH   L  +  N++ A  LPK   E  +SIP  + K M N +
Sbjct: 286 VQEHSKYAIATNNKATSIHHAVALAKENPNSTSATALPKGLDEDQSSIPHPTGKQMPNQM 345

Query: 101 NKFSIKEGSKEAEIVKRTISE--CEANGIK 128
           +   +   +  A   +++ S    ++NG+K
Sbjct: 346 HNVVVNTMAVRANPPRKSTSNGVSQSNGVK 375


>At2g29710 putative flavonol 3-O-glucosyltransferase
          Length = 467

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 14/56 (25%), Positives = 28/56 (50%)

Query: 47  LHDKQNVTLFFLKKDLHHGTKLNLQFTNNSGAKFLPKEVANSIPFSSNKMENILNK 102
           ++ +Q +  F + K+L    +L L ++ +SG      E+  +I    NK  N++ K
Sbjct: 377 MYAEQQLNAFLMVKELKLAVELKLDYSVHSGEIVSANEIETAISCVMNKDNNVVRK 432


>At5g16720 putative protein
          Length = 600

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 21/88 (23%), Positives = 40/88 (44%), Gaps = 2/88 (2%)

Query: 74  NNSGAKFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKL 133
           +  G++ LP+    +    S K+E I    S+ E  +E E     +  C ++  KG++  
Sbjct: 511 SEDGSQGLPESDEKNFGSDSEKLEIIKQVDSVYERLQELETDGEFLKNCMSSAKKGDKGT 570

Query: 134 CITS--LESMVDFTISKLGNNVEAVSTE 159
            I    L+ + D    +L N +E  +T+
Sbjct: 571 DILKDILQHLRDLRTIELTNTIENQTTQ 598


>At4g01270 putative RING zinc finger protein
          Length = 506

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 92  SSNKMENILNKFS-IKEGSKEAEIVKRTISECEANGIKGEEKLCIT-----SLESMVDFT 145
           SS K+E  L K   +K+  +E E++           I   +K   T     ++ESM  F 
Sbjct: 249 SSEKLEKALEKIEKLKKRMRELELITEERENRALRDINVSKKCSYTEVSEPAIESMSSFR 308

Query: 146 ISKLGNNVEAVSTEVDK 162
           +    N VE +ST   K
Sbjct: 309 MLSSDNKVEKISTPPGK 325


>At1g24150 unknown protein
          Length = 725

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 74  NNSGAKFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKL 133
           N  G +F+ K       F  +  E +  K + +E  K  E+VKRT    +A  +KG+  L
Sbjct: 608 NKEGVRFVKK----MNEFLDSVEEEV--KLAKEEEKKVLELVKRTTEYYQAGAVKGKNPL 661

Query: 134 ----CITSLESMVDFTISKLGNNVEAVST 158
                +    +MVD    ++  N++  S+
Sbjct: 662 HLFVIVRDFLAMVDKVCVEIARNLQRRSS 690


>At1g23160 GH3-like auxin-regulated protein
          Length = 578

 Score = 28.1 bits (61), Expect = 5.1
 Identities = 23/101 (22%), Positives = 45/101 (43%), Gaps = 16/101 (15%)

Query: 146 ISKLGNNVEAVSTEVDKNSNGLQQYVIAKGVKKLGEKNKTIVCHKENYPYAVFYCHKTDS 205
           ++++ +NV      ++ N+N LQ++ +    K+  +KN  +V +++  PY     +   S
Sbjct: 25  VTQIQDNVLEEILTLNANTNYLQKFFLGSFDKESFKKNVPVVTYEDVKPYIERVVNGEPS 84

Query: 206 TEVYSVPLEGVDGNMVKTIAVCHTDTS-------EWNPKHL 239
             + + P+ G          V  T TS        WN K+L
Sbjct: 85  NVISARPITGF---------VLSTGTSGGAQKMMPWNEKYL 116


>At5g58080 ARR2 - like protein
          Length = 632

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 63  HHGTKLNLQFTNNSGAKFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAE 113
           HH  K N++    S AK LP   ++S+P +S K ++ +N    ++ S   E
Sbjct: 127 HHVVKKNIK----SYAKLLPPSESDSVPSASRKRKDKVNDSGDEDDSDREE 173


>At4g30160 putative villin
          Length = 974

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 17/55 (30%), Positives = 26/55 (46%)

Query: 79  KFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKL 133
           K  PK   +  P S++K +    +   +EGS  + I   TI E    G++ EE L
Sbjct: 858 KASPKTPESPAPESNSKEQEEKKENDKEEGSMSSRIESLTIQEDAKEGVEDEEDL 912


>At2g22420 putative peroxidase
          Length = 329

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 23/107 (21%), Positives = 45/107 (41%), Gaps = 15/107 (14%)

Query: 76  SGAKFLPKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCI 135
           +G    P+  + + P + + +   + K  IKE    A +++    +C  NG       C 
Sbjct: 19  TGETLRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNG-------CD 71

Query: 136 TSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVIAKGVKKLGEK 182
            SL  ++D T + LG  +         N + L+ + +   +K+  EK
Sbjct: 72  ASL--LLDDTPNMLGEKLSL------SNIDSLRSFEVVDDIKEALEK 110


>At1g76780 putative heat shock protein
          Length = 1871

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 12/52 (23%), Positives = 27/52 (51%)

Query: 82  PKEVANSIPFSSNKMENILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKL 133
           P+++  +I      + + L + ++++G K  E+V+  I +CE      E K+
Sbjct: 792 PEKITGTIKQELVSLNSQLRQENVEDGDKTQELVEEKIKDCEEEEGSEESKI 843


>At1g03830 unknown protein
          Length = 991

 Score = 27.7 bits (60), Expect = 6.6
 Identities = 39/178 (21%), Positives = 75/178 (41%), Gaps = 24/178 (13%)

Query: 83  KEVANSIPFSS--NKMENILNKFSIKEGSKEAEI------VKRTISECEA--NGIKGEEK 132
           K VAN   +S   N +E++  K      S++A I      +   ++E EA  NG    +K
Sbjct: 317 KRVANVEAYSRCCNAIEDMGKKLWALPCSQDANIGDMIKALDTAVAEYEASINGPMKWQK 376

Query: 133 LCITSLESMVDFTISKLGNNVEAVSTEVDKNSNGLQQYVIAKGV----KKLGEKNKTIVC 188
           L     ES+ D  + + GN ++ + +E  K    LQQ  +   +    K+L  + K    
Sbjct: 377 LSSFLRESVQDILVHRRGNQMDELMSENSKLK--LQQQSLESTMNLLKKQLEGREKMNKE 434

Query: 189 HKENYPYAV--------FYCHKTDSTEVYSVPLEGVDGNMVKTIAVCHTDTSEWNPKH 238
           +++ Y  A+         + ++ +  E     +     N+++ +     + SEW  K+
Sbjct: 435 YQKRYESAIDDICKLSDQFKNRINDLESKCKSIHDEHSNLMEVLGSTRLEASEWKRKY 492


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.316    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,250,132
Number of Sequences: 26719
Number of extensions: 265481
Number of successful extensions: 685
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 658
Number of HSP's gapped (non-prelim): 25
length of query: 267
length of database: 11,318,596
effective HSP length: 98
effective length of query: 169
effective length of database: 8,700,134
effective search space: 1470322646
effective search space used: 1470322646
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)


Medicago: description of AC148532.9