Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148532.13 + phase: 0 
         (303 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g25610 dehydration-induced protein RD22                            308  3e-84
At1g49320 unknown protein                                             156  1e-38
At1g60390                                                             132  2e-31
At1g70370 unknown protein                                             132  2e-31
At1g23760 putative polygalacuronase isoenzyme 1 beta subunit          122  2e-28
At2g23730 hypothetical protein                                         31  0.72
At4g02950 putative protein                                             30  1.2
At2g34820 putative bHLH transcription factor  (bHLH053)                30  1.2
At4g02820 Unknown protein (At4g02820)                                  30  2.1
At5g24550 beta-glucosidase                                             29  2.8
At1g76780 putative heat shock protein                                  29  3.6
At1g49310 unknown protein                                              29  3.6
At1g26990 polyprotein, putative                                        29  3.6
At5g19320 RAN GTPase activating protein 2                              28  4.7
At3g29480 hypothetical protein                                         28  4.7
At3g14590 hypothetical protein                                         28  4.7
At4g39160 putative protein                                             28  6.1
At2g33310 auxin regulated protein (IAA13)                              28  6.1
At4g25430 hypothetical protein                                         28  8.0

>At5g25610 dehydration-induced protein RD22
          Length = 392

 Score =  308 bits (788), Expect = 3e-84
 Identities = 171/370 (46%), Positives = 220/370 (59%), Gaps = 74/370 (20%)

Query: 2   LPPQLYWKSMLPNSPMPKAITNLLHPAGYWSEEKGTWVDVGKGGVDVGVRKGYY------ 55
           L P+ YW + LPN+P+P ++ NLL     +++EK T V VGKGGV+V   KG        
Sbjct: 23  LTPERYWSTALPNTPIPNSLHNLL--TFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAV 80

Query: 56  ---------------EGGGTDVNVGVGR-------------------------------- 68
                           GGGT V+VG G+                                
Sbjct: 81  NVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRH 140

Query: 69  -------------SPFIYNYAASETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTS--N 113
                        +PF+YNYAA ETQLHD PN ALFFLEKDL  G ++N++F+       
Sbjct: 141 KGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGG 200

Query: 114 AATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQIVKNTISECEEQGIKGEEKVCVT 173
              FLPR  A ++PF S K    + + +++ GS+  +++K TI ECE + + GEEK C T
Sbjct: 201 KTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCAT 260

Query: 174 SLESMVDFTTSKLGK-NVEAVSTEV-NKESNLQQYTIAS-GVKKLGEKNKAVVCHKENYP 230
           SLESMVDF+ SKLGK +V AVSTEV  K + +Q+Y IA+ GVKKL + +K+VVCHK+ YP
Sbjct: 261 SLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSD-DKSVVCHKQKYP 319

Query: 231 YAVFYCHKTDTTKAYSVPLEGADGSRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVC 290
           +AVFYCHK   T  Y+VPLEG +G R KA+AVCH +TS WNP HLAF+VLKV+PGTVPVC
Sbjct: 320 FAVFYCHKAMMTTVYAVPLEGENGMRAKAVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVC 379

Query: 291 HLLPEDHVVW 300
           H LPE HVVW
Sbjct: 380 HFLPETHVVW 389


>At1g49320 unknown protein
          Length = 280

 Score =  156 bits (395), Expect = 1e-38
 Identities = 87/231 (37%), Positives = 132/231 (56%), Gaps = 12/231 (5%)

Query: 84  DKPNVALFFLEKDLHHGTKLNLQFSKTT-SNAATFLPRQVANSIPFSSNKMEYIINKLNI 142
           D P++ ++F   DL  GTKL + F K         L RQ A+ IPF+ +K++++++  +I
Sbjct: 51  DDPSLYMYFTLNDLKLGTKLLIYFYKNDLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSI 110

Query: 143 KKGSKGVQIVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVE--AVSTEVNKE 200
            K S   + +K T+  C+ + I+GE K C TSLES++D     +G NV+   ++T+V   
Sbjct: 111 TKDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLESLIDLVKKTMGYNVDLKVMTTKVMVP 170

Query: 201 SN------LQQYTIASGVKKLGEKNKAVVCHKENYPYAVFYCH-KTDTTKAYSVPLEGAD 253
           +       L  YT     K+L    K + CH+  YPYAV+YCH     ++ + V L   D
Sbjct: 171 AQNSISYALHNYTFVEAPKEL-VGIKMLGCHRMPYPYAVYYCHGHKGGSRVFEVNLVTDD 229

Query: 254 G-SRVKAIAVCHTDTSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVWIRK 303
           G  RV   AVCH DTS W+  H+AF+VLK++P + PVCH  P D++VW+ K
Sbjct: 230 GRQRVVGPAVCHMDTSTWDADHVAFKVLKMEPRSAPVCHFFPLDNIVWVTK 280


>At1g60390
          Length = 624

 Score =  132 bits (333), Expect = 2e-31
 Identities = 75/214 (35%), Positives = 107/214 (49%), Gaps = 6/214 (2%)

Query: 91  FFLEKDLHHGTKLNLQFSKTTSNAATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQ 150
           FF E  L  GT + +   K      TFLPR +  ++PFSS+ +  I       + S    
Sbjct: 409 FFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAG 468

Query: 151 IVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTEVNKESNLQQYTI-- 208
           I+ + +SECE     GE K CV S E M+DF TS LG+ V   +TE N   + ++  I  
Sbjct: 469 IISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTE-NVVGSKKKVVIGK 527

Query: 209 ASGVKKLGEKNKAVVCHKENYPYAVFYCHKTDTTKAYSVPLEGADGSRV--KAIAVCHTD 266
            +G+   G+  +AV CH+  YPY ++YCH     + Y   L            +A+CH D
Sbjct: 528 VNGING-GDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDLLDPKSLEKINHGVAICHID 586

Query: 267 TSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVW 300
           TS W+P H AF  L   PG + VCH + E+ + W
Sbjct: 587 TSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTW 620


>At1g70370 unknown protein
          Length = 626

 Score =  132 bits (332), Expect = 2e-31
 Identities = 75/214 (35%), Positives = 111/214 (51%), Gaps = 6/214 (2%)

Query: 91  FFLEKDLHHGTKLNLQFSKTTSNAATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQ 150
           FF E  L  GT + +   K      +FLPR +   +PFS++K+  I    +  + S    
Sbjct: 411 FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGG 470

Query: 151 IVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTEVNKESNLQQYTI-- 208
           I+ + ++ECE     GE K CV S E M+DF TS LG++V   +TE N   + ++  I  
Sbjct: 471 IITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTE-NVAGSKEKVVIGK 529

Query: 209 ASGVKKLGEKNKAVVCHKENYPYAVFYCHKTDTTKAYSVPLEGADGSRV--KAIAVCHTD 266
            +G+   G+  KAV CH+  YPY ++YCH     + Y   L   +  +     IA+CH D
Sbjct: 530 VNGING-GKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMD 588

Query: 267 TSEWNPKHLAFQVLKVQPGTVPVCHLLPEDHVVW 300
           TS W P H AF  L  +PG + VCH + E+ + W
Sbjct: 589 TSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNW 622


>At1g23760 putative polygalacuronase isoenzyme 1 beta subunit
          Length = 622

 Score =  122 bits (307), Expect = 2e-28
 Identities = 83/270 (30%), Positives = 121/270 (44%), Gaps = 24/270 (8%)

Query: 34  EKGTWVDVGKGGVDVGVRKGYYEGGGTDVNVGVGRSPFIYNYAASETQLHDKPNVALFFL 93
           +  T+ D  K GV+         GGG  VN  V                        FF 
Sbjct: 370 QNSTFKDYTKTGVEFAKYNRSSLGGGKTVNKWV--------------------EPGKFFR 409

Query: 94  EKDLHHGTKLNLQFSKTTSNAATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQIVK 153
           E  L  GT + +   K      +FLPR + + +PFS++K+  I    +    S    I+ 
Sbjct: 410 ESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIIT 469

Query: 154 NTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTE-VNKESNLQQYTIASGV 212
           + + ECE      E K CV S E M+DF TS LG++V   +TE V            +G+
Sbjct: 470 DAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGI 529

Query: 213 KKLGEKNKAVVCHKENYPYAVFYCHKTDTTKAY-SVPLEGADGSRVK-AIAVCHTDTSEW 270
              G   K+V CH+  YPY ++YCH     + Y S  L+    +++   IA+CH DTS W
Sbjct: 530 NG-GRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDLLDPKSKAKINHGIAICHMDTSAW 588

Query: 271 NPKHLAFQVLKVQPGTVPVCHLLPEDHVVW 300
              H AF +L  +PG + VCH + E+ + W
Sbjct: 589 GANHGAFMLLGSRPGQIEVCHWIFENDMNW 618


>At2g23730 hypothetical protein
          Length = 216

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 164 IKGEEKVCVTSLESMVDFTT--SKLGKNVEAVSTEVNKESNLQQYTIASGVKKLGEKNKA 221
           +K E +  + +++S  D  T    +GKN E  S+    +   Q   IA  VK  G+    
Sbjct: 20  VKSEPEADLNAVKSSTDLVTVTGPIGKNGEGESSPSEPKWLQQDEPIALWVKWRGKWQAG 79

Query: 222 VVCHKENYPYAVFYCHKTDTTKAYSV 247
           + C K ++P        T   K Y V
Sbjct: 80  IRCAKADWPLTTLRGKPTHDRKKYCV 105


>At4g02950 putative protein
          Length = 318

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 33/146 (22%), Positives = 59/146 (39%), Gaps = 30/146 (20%)

Query: 106 QFSKTTSNAATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQI--VKNTISECEEQG 163
           +FSK   +    + R VA  I   S++  Y +++L   + S  V +  ++N      +Q 
Sbjct: 153 KFSKNQQDRPPLM-RVVAKRIDNGSSRPSYSLDELLAPRDSSTVAVGSIRN-----RDQE 206

Query: 164 IKGEEKVCVTSLESMVDFTTSKLGK----------------------NVEAVSTEVNKES 201
           +K  E     S+E +++FT S   K                      NVE +  E+ K  
Sbjct: 207 VKNRESSPSDSVEEVINFTDSPAMKMIVMLQPYGYTRMIQVEVTADDNVEELRKELVKMQ 266

Query: 202 NLQQYTIASGVKKLGEKNKAVVCHKE 227
              +  +  G+  L  K+K  V H++
Sbjct: 267 ERGELNLPQGMYYLIHKHKQAVLHED 292


>At2g34820 putative bHLH transcription factor  (bHLH053)
          Length = 291

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/58 (32%), Positives = 28/58 (47%), Gaps = 1/58 (1%)

Query: 143 KKGSKGVQIVKNTISECEE-QGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTEVNK 199
           KKGS  VQ+    + E +  Q     E+VC+   E + D TT +       +S E+NK
Sbjct: 226 KKGSSNVQMETQYLLESQAIQEKLSTEEVCLVPCEMVQDLTTEETICRTPNISREINK 283


>At4g02820 Unknown protein (At4g02820)
          Length = 532

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 20/84 (23%), Positives = 43/84 (50%), Gaps = 3/84 (3%)

Query: 141 NIKKGSKGVQIVKNTISECEEQG-IKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTEVNK 199
           ++KK +  V++VK    E EEQG +KG EK  + +L     +  ++L  ++     +  +
Sbjct: 435 SVKKWTVNVRLVKGACKELEEQGNVKGAEK--LMTLLQKAGYVNTQLYNSLLRTYAKAGE 492

Query: 200 ESNLQQYTIASGVKKLGEKNKAVV 223
            + + +  +A    +L E+ K ++
Sbjct: 493 MALIVEERMAKDNVELDEETKELI 516


>At5g24550 beta-glucosidase
          Length = 531

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 36/122 (29%), Positives = 54/122 (43%), Gaps = 19/122 (15%)

Query: 47  DVGVRKGYYEGGGTDVNVGVGRSPFIYN---YAASETQLHDKPNVALFFLEKDLHHGTKL 103
           D GV    Y+  G  V  G GRSP I++   +A  E    D  +VA+     D +H  K 
Sbjct: 42  DFGVASSAYQYEGA-VEEG-GRSPSIWDNFTHAFPERTNMDNGDVAV-----DFYHRYKD 94

Query: 104 NLQFSKTTSNAATFLPRQVANSIPFSSNKMEYIINKLNIKKGSKGVQIVKNTISECEEQG 163
           +++  K  +  +       +  +P  S K+   +NK       +GVQ  KN I E  + G
Sbjct: 95  DIKLIKEMNMDSFRFSLSWSRILP--SGKLSDGVNK-------EGVQFYKNLIDELIKNG 145

Query: 164 IK 165
           IK
Sbjct: 146 IK 147


>At1g76780 putative heat shock protein
          Length = 1871

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 23/119 (19%)

Query: 119 PRQVANSIPFSSNKMEYIINKLNIKKGSKGVQIVKNTISECEE----------------- 161
           P ++  +I      +   + + N++ G K  ++V+  I +CEE                 
Sbjct: 792 PEKITGTIKQELVSLNSQLRQENVEDGDKTQELVEEKIKDCEEEEGSEESKIKTDDVVRK 851

Query: 162 -QGIKGEE-----KVCVTSLESMVDFTTSKLGKNVEAVSTEVNKESNLQQYTIASGVKK 214
            QGIK EE     +   T +  +V+ TT    K  E  + E + E+         G+++
Sbjct: 852 VQGIKEEELYKPKREHGTKITELVEETTGDYEKQEEKETAESDIEAECGSLRKVDGIEE 910


>At1g49310 unknown protein
          Length = 82

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 7  YWKSMLPNSPMPKAITNLLH 26
          YWK M+ N P+P+ I  LL+
Sbjct: 35 YWKKMMKNEPLPEPIKELLN 54


>At1g26990 polyprotein, putative
          Length = 1436

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 34/150 (22%), Positives = 62/150 (40%), Gaps = 16/150 (10%)

Query: 134 EYIINKLNIKKGSKGVQI-VKNTISECEEQGI-------KGEE--KVCVTSLESMVDFTT 183
           E+  N L++   +K +Q  V  T  EC  Q +       KG +   + + +L+  +   +
Sbjct: 481 EFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSLVDVS 540

Query: 184 SKLGKNVEAVSTEVNKESNLQQYTIAS-GVKKLGEKNKAVVCHKENYPYAVFYCHKTDTT 242
           S  GK+V    + V  ES +    +      K+   +  ++  K+       +CH    +
Sbjct: 541 SFPGKSV---CSSVKNESEMWHKRLGHPSFAKIDTLSDVLMLPKQKINKDSSHCHVCHLS 597

Query: 243 KAYSVPLEGADGSRVKAIAVCHTDTSEWNP 272
           K   +P +  +  R KA  + H DT  W P
Sbjct: 598 KQKHLPFKSVNHIREKAFELVHIDT--WGP 625


>At5g19320 RAN GTPase activating protein 2
          Length = 545

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 22/93 (23%), Positives = 44/93 (46%), Gaps = 6/93 (6%)

Query: 66  VGRSPFIYNYAASETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTSNAATFLPRQVANS 125
           V RSP + N+  S T++  K  +AL    +   H  KL+L+ +   + A   L + +++ 
Sbjct: 294 VKRSPLLENFRCSSTRVGSKGGIALSEALEHCTHMEKLDLRDNMFGTEAGVSLSKTLSS- 352

Query: 126 IPFSSNKMEYIINKLNIKKGSKGVQIVKNTISE 158
                +  E  ++ LN++   +G   + N + E
Sbjct: 353 ---FKHMTELYLSYLNLE--DEGAIAIVNALKE 380


>At3g29480 hypothetical protein
          Length = 718

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/46 (30%), Positives = 23/46 (49%)

Query: 53 GYYEGGGTDVNVGVGRSPFIYNYAASETQLHDKPNVALFFLEKDLH 98
          GY+ GG +       RS    N+ +S   +  + ++A+ FLE D H
Sbjct: 49 GYFSGGTSPEEADSWRSRVERNFGSSRCPVEYRVDLAVHFLEGDAH 94


>At3g14590 hypothetical protein
          Length = 705

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 30/176 (17%)

Query: 63  NVGVGRSPFIYNYAASETQLHDKPNVALFFLEKDLHHGTKLNLQFSKTTSNAATFLPRQV 122
           N+ +GR          E +L+D P   +   ++D+         F+   +N  +F    V
Sbjct: 354 NIKMGRLHLAITVLEDEAKLNDDPFEGVTICKEDMW------ASFASDVTNKGSF-SSVV 406

Query: 123 ANSIPFSSNKMEYIINKLNIKKG----SKGVQIV-----KNTISECEEQGIKGEEKVCVT 173
           ++  P   + ME I  +   + G      G ++      +   S C +  I+     C  
Sbjct: 407 SDKSPRVPDNMEPINIEGQEETGIWVHQPGTEVSQIWEPRKGKSRCLDNKIQ-----CAG 461

Query: 174 SLESMVDFTTSKLGKNVEAVSTEVNKESNLQQYTIASGVKKLG----EKNKAVVCH 225
           S+ S     T+    N E+ ST+ N+E   +  ++  G+KK+G    +  K   CH
Sbjct: 462 SVRS-----TASTSPNNESSSTDKNQEGKSEMKSVGWGLKKIGLVFHKNGKKEECH 512


>At4g39160 putative protein
          Length = 545

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/65 (24%), Positives = 29/65 (44%)

Query: 137 INKLNIKKGSKGVQIVKNTISECEEQGIKGEEKVCVTSLESMVDFTTSKLGKNVEAVSTE 196
           + ++  +  S G +  +  +S C    + GEE+ C+ +         SK GK+  A S +
Sbjct: 200 VGEMEAQNASGGWEQEEQGVSPCINNTVTGEEENCMGNTVEEQSKRESKTGKSKRATSRK 259

Query: 197 VNKES 201
             K S
Sbjct: 260 RKKTS 264


>At2g33310 auxin regulated protein (IAA13)
          Length = 246

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 16/130 (12%)

Query: 37  TWVDVGKGGVDVGVRKGYYEGGGTDVNVGVGRSPFIYNYAASETQLHDKPNVALFFLEKD 96
           T +++GKG  ++ +  G   GGGT   +G       +          D P+V        
Sbjct: 3   TELEMGKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAKDFPSV-------- 54

Query: 97  LHHGTKLNLQFSKTTSNAATFLPR--QVANSIPFSSNKMEYIINKLNIKKGSKGVQIVKN 154
              G+K   + + + S+A +  PR  QV    P  S++M  ++N    K   +  +  K 
Sbjct: 55  ---GSK---RAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKK 108

Query: 155 TISECEEQGI 164
            + + E + +
Sbjct: 109 KVKDDEPKDV 118


>At4g25430 hypothetical protein
          Length = 455

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)

Query: 118 LPRQVANSIPFSSNKME-YIINKLNIKKGSKGVQIVKNTISECEEQGIKGEEKVCVTSLE 176
           LP++ ++S  + SN +   IIN    +K   G+    N + E EE+ +   E+  V +L 
Sbjct: 378 LPQEPSSSKFYDSNTISPTIINAGETEKDVPGM----NKLEEEEERVVSEIERQIVDALV 433

Query: 177 SMVDFTTSKLGKNVEAVS 194
                TTS  G N  AVS
Sbjct: 434 QETVETTSLWGLNANAVS 451


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.314    0.132    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,233,278
Number of Sequences: 26719
Number of extensions: 313485
Number of successful extensions: 644
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 22
length of query: 303
length of database: 11,318,596
effective HSP length: 99
effective length of query: 204
effective length of database: 8,673,415
effective search space: 1769376660
effective search space used: 1769376660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)


Medicago: description of AC148532.13