BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148485.4 - phase: 0 
         (449 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g01150 polypyrimidine tract-binding protein like                   561  e-160
At5g53180 polypyrimidine tract-binding RNA transport protein-like     515  e-146
At1g43190 hypothetical protein                                        134  1e-31
At5g51300 unknown protein                                              42  7e-04
At4g19610 putative protein                                             42  7e-04
At4g12640 putative protein                                             40  0.003
At2g42890 MEI2-like protein (MEI2)                                     39  0.004
At2g35410 putative chloroplast RNA binding protein precursor           39  0.008
At4g34110 poly(A)-binding protein                                      38  0.010
At5g14540 unknown protein                                              38  0.013
At3g16380 putative poly(A) binding protein                             37  0.029
At5g07290 Mei2-like protein                                            35  0.11
At4g32640 putative protein                                             35  0.11
At5g48920 unknown protein                                              34  0.14
At5g17650 glycine/proline-rich protein                                 34  0.14
At3g49840 putative protein                                             34  0.14
At3g44340 putative protein                                             34  0.14
At3g07540 putative protein                                             34  0.14
At1g31750 unknown protein                                              34  0.14
At1g03457 ribonucleoprotein like                                       34  0.14

>At3g01150 polypyrimidine tract-binding protein like
          Length = 399

 Score =  561 bits (1445), Expect = e-160
 Identities = 287/412 (69%), Positives = 328/412 (78%), Gaps = 27/412 (6%)

Query: 3   SSKQQQQFRCTQIPSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFVQF 62
           SS  Q QFR TQ PSKV+H RNLPWEC +EEL DLC  FGK+++TK NVG N+NQAFV+F
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  AELNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHHIVNSNSPGDIPGNVLLVTIEGVEA 122
           A+LNQAISMVSYYASSSEPAQ+RGKTVYIQYSNRH IVN+ SPGD+PGNVLLVT EGVE+
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 GDVSIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYLLP 182
            +VSIDVIHLVFSAFGFVHK+ATFEK AGFQAL+Q+TD ETA++A+ +LDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 EHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQPAIGPDGKRKEHK 242
            HVG+C+LR+SYSAH DLNIKFQS+RSRDYTNP LPVNQ A+D ++QPA+G DGK+ E +
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGSMQPALGADGKKVESQ 241

Query: 243 SNVLLATIENMQYAVPLDVLHSVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAKET 302
           SNVLL  IENMQYAV +DVLH+VFSA+G VQK+A+F+KNG T ALIQY D+  AA AKE 
Sbjct: 242 SNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMAKEA 301

Query: 303 LEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVLDPSLHAAQ--------AP--A 352
           LEGHCIYDGGYCKL L+YSRHTDLNVKAFSDKSRDYT+ D SL  AQ        AP   
Sbjct: 302 LEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAPPAG 361

Query: 353 WQTTQAATMYSGSMG---QMPSWDPNQQEVTQSYLSAPGTFPSGQAAPPFPG 401
           WQ  QA + YSG  G     PS DPN            G  PSGQ  PP+ G
Sbjct: 362 WQNPQAQSQYSGYGGSPYMYPSSDPN------------GASPSGQ--PPYYG 399


>At5g53180 polypyrimidine tract-binding RNA transport protein-like
          Length = 429

 Score =  515 bits (1326), Expect = e-146
 Identities = 267/435 (61%), Positives = 321/435 (73%), Gaps = 15/435 (3%)

Query: 1   MSSSKQQQQFRCTQIPSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFV 60
           MSS   Q QFR TQ PSKVLH RNLPWEC++EEL +L  PFG V++TKCNVG N+NQAF+
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 61  QFAELNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHHIVNSNSPGDIPGNVLLVTIEGV 120
           +F +LNQAI M+SYYASSSEPAQVRGKTVY+QYSNR  IVN+ +  D+ GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 121 EAGDVSIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYL 180
           +A  VSIDV+HLVFSAFGFVHK+ TFEKTAG+QAL+Q+TDAETA +AK +LDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 181 LPEHVGACNLRISYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQPAIGPDGKRKE 240
           L E VG C+L+I+YSAH DL +KFQS+RSRDYTNP LPV  +AIDS  Q A+G DGK+ E
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME 240

Query: 241 HKSNVLLATIENMQYAVPLDVLHSVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAK 300
            +SNVLLA+IENMQYAV LDVLH VF+AFG VQK+AMFDKNG   ALIQY D+  A  AK
Sbjct: 241 PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK 300

Query: 301 ETLEGHCIYDGGYCKLHLTYSRHTDLNVKAFSDKSRDYTVLDPSLHAAQAPAWQTTQAAT 360
           E LEGHCIYDGG+CKLH+TYSRHTDL++K  +D+SRDYT+ +P +   Q P         
Sbjct: 301 EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQP------VQN 354

Query: 361 MYSGSMGQMPSWDPN---QQEVTQSYLSAPGTFPSGQAAPPFPGYSPAAVPPAGASPH-- 415
            Y+G+  Q  +   +   QQ+  Q     PG    G       G++    PP+ +S H  
Sbjct: 355 PYAGNPQQYHAAGGSHHQQQQQPQGGWVQPG--GQGSMGMGGGGHNHYMAPPSSSSMHQG 412

Query: 416 --SHMPPSSFAGAFP 428
              HMPP  + G  P
Sbjct: 413 PGGHMPPQHYGGPGP 427


>At1g43190 hypothetical protein
          Length = 396

 Score =  134 bits (337), Expect = 1e-31
 Identities = 99/314 (31%), Positives = 168/314 (52%), Gaps = 36/314 (11%)

Query: 17  SKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFVQFAELNQAISMVSYYA 76
           SKV+H RN+  E S+ +L  L  PFG +  TK  +   +NQA +Q  +++ A+S + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMQDVSSAVSALQFF- 61

Query: 77  SSSEPAQVRGKTVYIQYSNRHHIV----NSNSPGDIPGNVLLVTIEGVEAGDVSIDVIHL 132
           ++ +P  +RG+ VY+Q+S+   +     N +   D P  +LLVTI  +    +++DV+H 
Sbjct: 62  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 119

Query: 133 VFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSIPRYLLPEHVGACNLRI 192
           VFS +GFV KL TF+K+AGFQALIQY   + AASA+ +L GR+I       + G C L I
Sbjct: 120 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 172

Query: 193 SYSAHRDLNIKFQSNRSRDYTNPMLPVNQAAIDSALQPAIGPDGKRKEHKSNVLLATIEN 252
            +S   +L +  Q              N +AI +A    + P       +  VL++ +  
Sbjct: 173 QFS---NLAMVIQE-----------MANTSAIAAAFGGGLPPGITGTNDRCTVLVSNLN- 217

Query: 253 MQYAVPLDVLHSVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAKETLEGHCIYDGG 312
              ++  D L ++FS +G + ++ +  +N   HAL+Q  D   A  A   L+G  ++   
Sbjct: 218 -ADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALVQMGDGFQAELAVHFLKGAMLFGK- 274

Query: 313 YCKLHLTYSRHTDL 326
             +L + +S+H ++
Sbjct: 275 --RLEVNFSKHPNI 286



 Score = 35.4 bits (80), Expect = 0.064
 Identities = 22/72 (30%), Positives = 39/72 (53%), Gaps = 1/72 (1%)

Query: 8   QQFRCTQIPSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFVQFA-ELN 66
           + +R    P+K++H   LP + ++EE+ +     G V++TK      + QA VQF  E  
Sbjct: 309 KNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFENEEE 368

Query: 67  QAISMVSYYASS 78
            A ++V  +A+S
Sbjct: 369 AAEALVCKHATS 380


>At5g51300 unknown protein
          Length = 804

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 40/164 (24%), Positives = 62/164 (37%), Gaps = 14/164 (8%)

Query: 277 MFDKNGHTHALIQYPDLTIAAAAKETLEGHCIYDG--GYCKLHLTYSRHTDLNVKAFSDK 334
           M + +G  +    + ++ +A   K+ + G     G   Y  + +  +    +N   F  +
Sbjct: 490 MLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGR 549

Query: 335 SRDYTVLDPSLHAAQAPAWQTTQAATMYSGSMGQMPSWDPNQQEVTQSYLSAPGTFPSGQ 394
           +    +   S      P     Q  T       Q P   P+QQ  T  Y +AP   P G 
Sbjct: 550 TLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPGAYPSQQYATGGYSTAP--VPWG- 606

Query: 395 AAPPFPGYSPAAVPPAGASPH-----SHMPPSSFAGAFPGSQPH 433
             PP P YSP A+PP     +      HMPP  +   +P   PH
Sbjct: 607 --PPVPSYSPYALPPPPPGSYHPVHGQHMPP--YGMQYPPPPPH 646


>At4g19610 putative protein
          Length = 772

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 16  PSKVLHFRNLPWECSDEELADLCSPFGKVMS---TKCNVGVNQNQAFVQFAELNQAISMV 72
           P   LH +N+ +E +  EL  L SPFG++ S    K N+G     AFV+F    +A++  
Sbjct: 656 PCTKLHVKNIAFEATKRELRQLFSPFGQIKSMRLPKKNIGQYAGYAFVEFVTKQEALNAK 715

Query: 73  SYYASSSEPAQVRGKTVYIQYSN 95
              AS+       G+ + ++++N
Sbjct: 716 KALAST----HFYGRHLVLEWAN 734


>At4g12640 putative protein
          Length = 695

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 5/62 (8%)

Query: 261 VLHSVFSAFGFVQKVAMFDKNGHTHALIQYPDLTIAAAAKETLEGHCIYDGGYCKLHLTY 320
           +L +VFS+FG + KV +F   G ++A +Q+ +L  A  AKE+L+G      G  ++H+ +
Sbjct: 39  LLRNVFSSFGEITKVTVFP--GRSYAFVQFRNLMAACKAKESLQGKLF---GNPRVHICF 93

Query: 321 SR 322
           ++
Sbjct: 94  AK 95



 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/42 (35%), Positives = 24/42 (56%), Gaps = 2/42 (4%)

Query: 133 VFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGR 174
           VFS+FG + K+  F   +   A +Q+ +   A  AK+SL G+
Sbjct: 43  VFSSFGEITKVTVFPGRS--YAFVQFRNLMAACKAKESLQGK 82


>At2g42890 MEI2-like protein (MEI2)
          Length = 843

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 44/171 (25%), Positives = 73/171 (41%), Gaps = 32/171 (18%)

Query: 16  PSKVLHFRNLPWECSDEELADLCSPFGKVMS--TKCNVGVNQNQAFVQFAELNQAISMVS 73
           PS+ L  RN+     D EL+ L  PFG++ S  T C     +++ FV          M+S
Sbjct: 196 PSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTAC-----KSRGFV----------MIS 240

Query: 74  YYASSSEPAQVRG--------KTVYIQYSNRHHIVNSNSPGDIPGNVLLVTIEGVEAGDV 125
           YY   +  A +R         +T+ I +S     +   +P +   N   + I  V+   V
Sbjct: 241 YYDIRAAHAAMRALQNTLLRKRTLDIHFS-----IPKENPSEKDMNQGTLVIFNVDT-TV 294

Query: 126 SIDVIHLVFSAFGFVHKLATFEKTAGFQALIQYTDAETAASAKDSLDGRSI 176
           S D +  +F A+G + ++        F   I+Y D   A +A  +L+   I
Sbjct: 295 SNDELLQLFGAYGEIREIRE-TPNRRFHRFIEYYDVRDAETALKALNRSEI 344


>At2g35410 putative chloroplast RNA binding protein precursor
          Length = 308

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 2   SSSKQQQQFRCTQIPSKVLHFRNLPWECSDEELADL---CSPFGKVMSTKCNVGVNQNQA 58
           S  ++ ++ + + +  K+  F NLPW  S  ++++L   C     V   +   G N+  A
Sbjct: 80  SQEEKTEETQNSNLKRKLFVF-NLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFA 138

Query: 59  FVQFAELNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHHIVNSNSPGDIP 109
           FV  A   +A + +  +    +  QV G+ + + ++ R       SP D+P
Sbjct: 139 FVTMASGEEAQAAIDKF----DTFQVSGRIISVSFARRFKKPTPKSPNDLP 185


>At4g34110 poly(A)-binding protein
          Length = 629

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)

Query: 17  SKVLHFRNLPWECSDEELADLCSPFGKVMSTKC---NVGVNQNQAFVQFA---ELNQAIS 70
           S  L+ +NL    SDE+L ++ SPFG V S+K      G ++   FV FA   E  +A+S
Sbjct: 317 SSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMS 376

Query: 71  MVSYYASSSEPAQV 84
            +S     S+P  V
Sbjct: 377 QLSGKMIESKPLYV 390



 Score = 29.3 bits (64), Expect = 4.6
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)

Query: 250 IENMQYAVPLDVLHSVFSAFGFVQ--KVAMFDKNGHT--HALIQYPDLTIAAAAKETLEG 305
           I+N+  ++    LH  FS+FG +   KVA+ D +G +  +  +QY +   A  A E L G
Sbjct: 128 IKNLDESIDHKALHDTFSSFGNIVSCKVAV-DSSGQSKGYGFVQYANEESAQKAIEKLNG 186

Query: 306 HCIYD 310
             + D
Sbjct: 187 MLLND 191


>At5g14540 unknown protein
          Length = 530

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 26/87 (29%), Positives = 37/87 (41%), Gaps = 9/87 (10%)

Query: 368 QMPSWDPNQQEVTQSYLSAPGTFPSGQAAPPFPGYSPAAVPPAGASPHSH------MPPS 421
           Q P   P Q +    Y      +P  Q+ PP P   P + PP G++P          PPS
Sbjct: 319 QYPQQPPPQLQHPSGYNPEEPPYPQ-QSYPPNPPRQPPSHPPPGSAPSQQYYNAPPTPPS 377

Query: 422 SFAGAFPGSQPHYGWESRFRLNYNPYT 448
            + G  PG + + G+ S +     PYT
Sbjct: 378 MYDG--PGGRSNSGFPSGYSPESYPYT 402


>At3g16380 putative poly(A) binding protein
          Length = 537

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 38/161 (23%), Positives = 68/161 (41%), Gaps = 17/161 (10%)

Query: 20  LHFRNLPWECSDEELADLCSPFGKVMSTKC--NVGVNQNQAFVQFAELNQAISMVSYYAS 77
           L+ +NL    +   L  +  PFG ++S K     G ++   FVQF     A+S      S
Sbjct: 114 LYVKNLDSSITSSCLERMFCPFGSILSCKVVEENGQSKGFGFVQFDTEQSAVSA----RS 169

Query: 78  SSEPAQVRGKTVYIQYSNRHHIVNSNSPGDIPGNVLLVTIEGVEAGD-VSIDVIHLVFSA 136
           +   + V GK +++        +N +    + GN     +      + V+ D +H +FS 
Sbjct: 170 ALHGSMVYGKKLFVA-----KFINKDERAAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQ 224

Query: 137 FGFVHKLATFE----KTAGFQALIQYTDAETAASAKDSLDG 173
           +G V  +        ++ GF   + + + E A  A +SL G
Sbjct: 225 YGTVSSVVVMRDGMGRSRGF-GFVNFCNPENAKKAMESLCG 264


>At5g07290 Mei2-like protein
          Length = 907

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 33/173 (19%)

Query: 14  QIPSKVLHFRNLPWECSDEELADLCSPFGKVMSTKCNVGVNQNQAFVQFAELNQAISMVS 73
           +I S++L  RN+     D EL  L   FG V +             +  A  N+   MVS
Sbjct: 207 EILSRILFVRNVDSSIEDCELGVLFKQFGDVRA-------------LHTAGKNRGFIMVS 253

Query: 74  YY--------ASSSEPAQVRGKTVYIQYS-NRHHIVNSNSPGDIPGNVLLVTIEGVEAGD 124
           YY        A +     +RG+ + I+YS  + +   ++S G +  N L           
Sbjct: 254 YYDIRAAQKAARALHGRLLRGRKLDIRYSIPKENPKENSSEGALWVNNL--------DSS 305

Query: 125 VSIDVIHLVFSAFGFVHKL-ATFEKTAGFQALIQYTDAETAASAKDSLDGRSI 176
           +S + +H +FS++G + ++  T  + +  Q  I++ D   A  A   L+G  +
Sbjct: 306 ISNEELHGIFSSYGEIREVRRTMHENS--QVYIEFFDVRKAKVALQGLNGLEV 356


>At4g32640 putative protein
          Length = 1069

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 34/102 (33%), Positives = 45/102 (43%), Gaps = 13/102 (12%)

Query: 354 QTTQAATMYSGSMGQMPSWDPNQQEVTQSYLSA--PGTFPS-----GQAAPPFPGYSPA- 405
           Q +     Y GS G   +   N Q ++ +      PG+ P      GQ+  PFP  SP+ 
Sbjct: 16  QNSGPPNFYPGSQGNSNALADNMQNLSLNRPPPMMPGSGPRPPPPFGQSPQPFPQQSPSY 75

Query: 406 AVPPAGASPHSHM-PPSSFA---GAFPGSQPHYGWESRFRLN 443
             P  G SP S   PP+  A   G  P SQP  G++S   LN
Sbjct: 76  GAPQRGPSPMSRPGPPAGMARPGGPPPVSQP-AGFQSNVPLN 116



 Score = 29.3 bits (64), Expect = 4.6
 Identities = 27/73 (36%), Positives = 29/73 (38%), Gaps = 7/73 (9%)

Query: 364 GSMGQMPSWDPNQQEVTQSYLSAPGTFPSGQAAPPFPGYSPAAV---PPAGASPHSHMPP 420
           GS   MP     Q   + S   A G   S  A PP PG  P A    PP G+     MPP
Sbjct: 129 GSRPSMPGGPVAQPAASSSGFPAFGPSGSVAAGPP-PGSRPMAFGSPPPVGSG--MSMPP 185

Query: 421 SSFAGAFPGSQPH 433
           S   G  P S  H
Sbjct: 186 SGMIGG-PVSNGH 197


>At5g48920 unknown protein
          Length = 205

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 20/52 (38%), Positives = 23/52 (43%), Gaps = 5/52 (9%)

Query: 382 SYLSAPGTFPSGQAAPPFPGYSPAAVPPAGASPHSHMPPSSFAGAFPGSQPH 433
           S++S P    S    PP P +SP   PP    PH H PP S     P   PH
Sbjct: 29  SHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPS-----PYPHPH 75



 Score = 29.3 bits (64), Expect = 4.6
 Identities = 21/71 (29%), Positives = 27/71 (37%), Gaps = 8/71 (11%)

Query: 363 SGSMGQMPSWDPNQQEVTQSYLSAPGTFPSGQAAPPFPGYSPAAVPPAGASPHSHMPPSS 422
           + S+   P + P      Q  L +P   P    +PP P +SP   PP       H PP S
Sbjct: 2   AASVEYFPYYSPPSH---QHPLPSPVPPPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPS 58

Query: 423 FAGAFPGSQPH 433
                P   PH
Sbjct: 59  -----PYPHPH 64


>At5g17650 glycine/proline-rich protein
          Length = 173

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/42 (42%), Positives = 21/42 (49%), Gaps = 3/42 (7%)

Query: 397 PPFPGYSPAAVPPAGASPHSHMPPSSFAGAFPGSQPHYGWES 438
           PP  GY P A PP G  P +  PP   AG  P   P +G+ S
Sbjct: 49  PPPHGYPPVAYPPHGGYPPAGYPP---AGYPPAGYPAHGYPS 87



 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 3/36 (8%)

Query: 382 SYLSAPGTFPSGQ---AAPPFPGYSPAAVPPAGASP 414
           SY   P   P G    A PP  GY PA  PPAG  P
Sbjct: 42  SYPYPPPPPPHGYPPVAYPPHGGYPPAGYPPAGYPP 77


>At3g49840 putative protein
          Length = 651

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 387 PGTFPSGQAAPPFPGYSPAAVPPAGASPHSHMPPSSFAGA-FPGSQPHYG 435
           P + P  Q  PP  GY PA  PP    P    P + +  A +P  Q  YG
Sbjct: 536 PVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYG 585


>At3g44340 putative protein
          Length = 1122

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 370 PSWDPNQQEVTQSYLSAPGTFPSGQA--APPFPGYSPAAVPPAGASPHSHMPPSSFAGAF 427
           P   P   + T   + AP   P GQ   A PF G SP + PPA    HS  PP++F G  
Sbjct: 231 PGAFPRGSQFTSGPMMAPPP-PYGQPPNAGPFTGNSPLSSPPA----HSIPPPTNFPGVP 285

Query: 428 PGSQPHYG 435
            G  P  G
Sbjct: 286 YGRPPMPG 293



 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/71 (29%), Positives = 25/71 (34%), Gaps = 5/71 (7%)

Query: 367 GQMPSWDPNQQEVTQSYLSAPGTFPSGQAAPPFPGYSPAAVPPAGASPHS-----HMPPS 421
           G  P++ P  Q    S  +        +  PP PG  P   PP G SP S        P 
Sbjct: 20  GGPPNFVPGSQGNPNSLAANMQNLNINRPPPPMPGSGPRPSPPFGQSPQSFPQQQQQQPR 79

Query: 422 SFAGAFPGSQP 432
               A PG  P
Sbjct: 80  PSPMARPGPPP 90



 Score = 28.5 bits (62), Expect = 7.9
 Identities = 25/75 (33%), Positives = 30/75 (39%), Gaps = 10/75 (13%)

Query: 363 SGSMGQMPSWDPNQQEVTQ--SYLSAPGTFPSGQAAPPFPGYSPAAVPPAGASPHSHMPP 420
           S   GQ P   P QQ+     S ++ PG  P   AA   PG  P    P G       PP
Sbjct: 60  SPPFGQSPQSFPQQQQQQPRPSPMARPG--PPPPAAMARPGGPPQVSQPGG------FPP 111

Query: 421 SSFAGAFPGSQPHYG 435
                A P +QP +G
Sbjct: 112 VGRPVAPPSNQPPFG 126


>At3g07540 putative protein
          Length = 841

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 18/47 (38%), Positives = 23/47 (48%)

Query: 384 LSAPGTFPSGQAAPPFPGYSPAAVPPAGASPHSHMPPSSFAGAFPGS 430
           L AP T PS  + P FP YS  + PP  + P    PP+     FP +
Sbjct: 36  LQAPVTDPSTFSPPFFPLYSSTSPPPPPSPPQPLPPPAPTFATFPAN 82


>At1g31750 unknown protein
          Length = 176

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 387 PGTFPSGQAAPPFPGYSPAAVPPAGASPHSHMPPSSFAGAFPGSQPHYG 435
           PG +P     PP  GY PAA PP    P    PP+ + G   G +P +G
Sbjct: 40  PGGYPPQGYPPPPHGYPPAAYPP----PPGAYPPAGYPGP-SGPRPGFG 83


>At1g03457 ribonucleoprotein like
          Length = 429

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 17/93 (18%)

Query: 13  TQIPSKV---------LHFRNLPWECSDEELADLCSPFGKVMSTKCNV----GVNQNQAF 59
           T IPS +         L   N+P E  D+ELA    PFGKV+S K  V    G+++   F
Sbjct: 316 TSIPSSLQTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISKCFGF 375

Query: 60  VQFAELNQAISMVSYYASSSEPAQVRGKTVYIQ 92
           + +     A + +    ++    Q+ GK + +Q
Sbjct: 376 ISYDSQAAAQNAI----NTMNGCQLSGKKLKVQ 404


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.131    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,355,197
Number of Sequences: 26719
Number of extensions: 450673
Number of successful extensions: 1956
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1659
Number of HSP's gapped (non-prelim): 291
length of query: 449
length of database: 11,318,596
effective HSP length: 103
effective length of query: 346
effective length of database: 8,566,539
effective search space: 2964022494
effective search space used: 2964022494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)